CANDIDATE ID: 31

CANDIDATE ID: 31

NUMBER OF GENES: 9
AVERAGE SCORE:    9.9981519e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG12715 (dxr) (b0173)
   Products of gene:
     - DXPREDISOM-MONOMER (Dxr)
     - DXPREDISOM-CPLX (1-deoxy-D-xylulose 5-phosphate reductoisomerase)
       Reactions:
        2-C-methyl-D-erythritol-4-phosphate + NADP+  =  1-deoxy-D-xylulose 5-phosphate + NADPH + H+
         In pathways
         PWY-5121 (PWY-5121)
         NONMEVIPP-PWY (methylerythritol phosphate pathway)

- EG12436 (rseP) (b0176)
   Products of gene:
     - EG12436-MONOMER (RseP zinc protease)

- EG11539 (pyrH) (b0171)
   Products of gene:
     - UMPKI-MONOMER (PyrH)
     - UMPKI-CPLX (uridylate kinase)
       Reactions:
        ATP + uridine-5'-phosphate  =  ADP + uridine-5'-diphosphate + H+
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         PWY0-162 (pyrimidine ribonucleotides de novo biosynthesis)
         PWY-5687 (pyrimidine ribonucleotides interconversion)
         P1-PWY (P1-PWY)

- EG11411 (glnD) (b0167)
   Products of gene:
     - GLND-MONOMER (uridylyltransferase / uridylyl-removing enzyme)
       Reactions:
        [GlnK] + UTP  ->  diphosphate + uridylyl-[GlnK]
        a glutamine synthetase PII + UTP  ->  uridylyl-glutamine synthase PII + diphosphate
        PII-UMP  ->  PII + uridine-5'-phosphate

- EG11033 (tsf) (b0170)
   Products of gene:
     - EG11033-MONOMER (protein chain elongation factor EF-Ts)

- EG10901 (rpsB) (b0169)
   Products of gene:
     - EG10901-MONOMER (30S ribosomal subunit protein S2)
       Regulatees:
        TU00345 (rpsB-tsf)
     - CPLX0-3953 (30S ribosomal subunit)
       Regulatees:
        TU00345 (rpsB-tsf)
     - CPLX0-3964 (ribosome)

- EG10861 (rnhB) (b0183)
   Products of gene:
     - EG10861-MONOMER (RNAse HII,  degrades RNA of DNA-RNA hybrids)
       Reactions:
        EC# 3.1.26.4

- EG10335 (frr) (b0172)
   Products of gene:
     - EG10335-MONOMER (ribosome recycling factor)

- EG10139 (cdsA) (b0175)
   Products of gene:
     - CDPDIGLYSYN-MONOMER (CDP-diglyceride synthetase)
       Reactions:
        CTP + a 1,2-diacylglycerol-3-phosphate  ->  diphosphate + a CDP-diacylglycerol
         In pathways
         PHOSLIPSYN2-PWY (PHOSLIPSYN2-PWY)
         PWY4FS-8 (PWY4FS-8)
         PHOSLIPSYN-PWY (phospholipid biosynthesis I)
         PWY4FS-7 (PWY4FS-7)
         PWY-5667 (CDP-diacylglycerol biosynthesis I)
         PWY-5981 (PWY-5981)
         PWY0-1319 (CDP-diacylglycerol biosynthesis II)
        CTP + a 2,3,4-saturated L-phosphatidate  =  diphosphate + a CDP-2,3,4-saturated-diacylglycerol



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ORGANISMS CONTAINING AT LEAST 8 GENES FROM THE GROUP:

Total number of orgs: 250
Effective number of orgs (counting one per cluster within 166 clusters): 71

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM49
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329539
YPES386656 ncbi Yersinia pestis Pestoides F9
YPES377628 ncbi Yersinia pestis Nepal5169
YPES360102 ncbi Yersinia pestis Antiqua9
YPES349746 ncbi Yersinia pestis Angola9
YPES214092 ncbi Yersinia pestis CO929
YPES187410 ncbi Yersinia pestis KIM 109
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80819
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A9
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110189
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103319
XFAS183190 ncbi Xylella fastidiosa Temecula18
XFAS160492 ncbi Xylella fastidiosa 9a5c8
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-109
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80049
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339139
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3069
WSUC273121 ncbi Wolinella succinogenes DSM 17408
VVUL216895 ncbi Vibrio vulnificus CMCP69
VVUL196600 ncbi Vibrio vulnificus YJ0169
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106339
VFIS312309 ncbi Vibrio fischeri ES1149
VEIS391735 ncbi Verminephrobacter eiseniae EF01-29
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169619
TERY203124 ncbi Trichodesmium erythraeum IMS1018
TELO197221 ncbi Thermosynechococcus elongatus BP-18
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252599
TCRU317025 ncbi Thiomicrospira crunogena XCL-28
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen8
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT29
STRO369723 ncbi Salinispora tropica CNB-4409
STHE292459 ncbi Symbiobacterium thermophilum IAM 148638
SSP94122 ncbi Shewanella sp. ANA-39
SSP292414 ncbi Ruegeria sp. TM10408
SSP1148 ncbi Synechocystis sp. PCC 68038
SSON300269 ncbi Shigella sonnei Ss0469
SRUB309807 Salinibacter ruber DSM 138558
SONE211586 ncbi Shewanella oneidensis MR-19
SMEL266834 ncbi Sinorhizobium meliloti 10219
SMED366394 ncbi Sinorhizobium medicae WSM4199
SLOI323850 ncbi Shewanella loihica PV-49
SHIGELLA ncbi Shigella flexneri 2a str. 2457T9
SGLO343509 ncbi Sodalis glossinidius morsitans9
SFLE373384 ncbi Shigella flexneri 5 str. 84019
SFLE198214 ncbi Shigella flexneri 2a str. 3019
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23388
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B679
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91509
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT189
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty29
SELO269084 ncbi Synechococcus elongatus PCC 63018
SELO1140 ncbi Synechococcus elongatus PCC 79428
SDYS300267 ncbi Shigella dysenteriae Sd1979
SDEG203122 ncbi Saccharophagus degradans 2-409
SCOE100226 ncbi SCOE1002268
SBOY300268 ncbi Shigella boydii Sb2279
SAVE227882 ncbi Streptomyces avermitilis MA-46808
SALA317655 ncbi Sphingopyxis alaskensis RB22569
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170259
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170299
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.19
RSOL267608 ncbi Ralstonia solanacearum GMI10009
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111709
RPOM246200 ncbi Ruegeria pomeroyi DSS-39
RPAL316057 ncbi Rhodopseudomonas palustris BisB59
RPAL316056 ncbi Rhodopseudomonas palustris BisB189
RPAL316055 ncbi Rhodopseudomonas palustris BisA539
RPAL258594 ncbi Rhodopseudomonas palustris CGA0099
RMET266264 ncbi Ralstonia metallidurans CH349
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38419
RFER338969 ncbi Rhodoferax ferrireducens T1189
REUT381666 ncbi Ralstonia eutropha H169
REUT264198 ncbi Ralstonia eutropha JMP1349
RETL347834 ncbi Rhizobium etli CFN 429
RDEN375451 ncbi Roseobacter denitrificans OCh 1148
PTHE370438 ncbi Pelotomaculum thermopropionicum SI8
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30009
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a9
PSTU379731 ncbi Pseudomonas stutzeri A15019
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-19
PSP296591 ncbi Polaromonas sp. JS6669
PPUT351746 ncbi Pseudomonas putida F19
PPUT160488 ncbi Pseudomonas putida KT24409
PPRO298386 ncbi Photobacterium profundum SS99
PNAP365044 ncbi Polaromonas naphthalenivorans CJ29
PMEN399739 ncbi Pseudomonas mendocina ymp9
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO19
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1259
PGIN242619 ncbi Porphyromonas gingivalis W838
PFLU220664 ncbi Pseudomonas fluorescens Pf-59
PFLU205922 ncbi Pseudomonas fluorescens Pf0-19
PENT384676 ncbi Pseudomonas entomophila L489
PDIS435591 ncbi Parabacteroides distasonis ATCC 85038
PCRY335284 ncbi Psychrobacter cryohalolentis K59
PCAR338963 ncbi Pelobacter carbinolicus DSM 23809
PATL342610 ncbi Pseudoalteromonas atlantica T6c9
PARC259536 ncbi Psychrobacter arcticus 273-48
PAER208964 ncbi Pseudomonas aeruginosa PAO19
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA149
OCAR504832 ncbi Oligotropha carboxidovorans OM59
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2559
NSP35761 Nocardioides sp.8
NSP103690 ncbi Nostoc sp. PCC 71208
NMUL323848 ncbi Nitrosospira multiformis ATCC 251969
NMEN272831 ncbi Neisseria meningitidis FAM189
NMEN122587 ncbi Neisseria meningitidis Z24919
NMEN122586 ncbi Neisseria meningitidis MC589
NHAM323097 ncbi Nitrobacter hamburgensis X149
NGON242231 ncbi Neisseria gonorrhoeae FA 10909
NFAR247156 ncbi Nocardia farcinica IFM 101528
NEUR228410 ncbi Nitrosomonas europaea ATCC 197188
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-18
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra9
MTUB336982 ncbi Mycobacterium tuberculosis F119
MTBRV ncbi Mycobacterium tuberculosis H37Rv9
MTBCDC ncbi Mycobacterium tuberculosis CDC15519
MSP400668 ncbi Marinomonas sp. MWYL19
MSP189918 ncbi Mycobacterium sp. KMS9
MSP164756 ncbi Mycobacterium sp. MCS9
MSME246196 ncbi Mycobacterium smegmatis MC2 1558
MPET420662 ncbi Methylibium petroleiphilum PM19
MMAR394221 ncbi Maricaulis maris MCS109
MMAG342108 ncbi Magnetospirillum magneticum AMB-19
MLOT266835 ncbi Mesorhizobium loti MAFF3030998
MLEP272631 ncbi Mycobacterium leprae TN8
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK8
MFLA265072 ncbi Methylobacillus flagellatus KT9
MCAP243233 ncbi Methylococcus capsulatus Bath9
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P28
MBOV233413 ncbi Mycobacterium bovis AF2122/979
MAQU351348 ncbi Marinobacter aquaeolei VT89
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53348
LPNE400673 ncbi Legionella pneumophila Corby8
LPNE297246 ncbi Legionella pneumophila Paris8
LPNE297245 ncbi Legionella pneumophila Lens8
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 18
LMON265669 ncbi Listeria monocytogenes 4b F23658
LMON169963 ncbi Listeria monocytogenes EGD-e8
LINN272626 ncbi Listeria innocua Clip112628
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785789
JSP375286 ncbi Janthinobacterium sp. Marseille9
JSP290400 ncbi Jannaschia sp. CCS19
ILOI283942 ncbi Idiomarina loihiensis L2TR9
HSOM205914 ncbi Haemophilus somnus 129PT9
HNEP81032 Hyphomonas neptunium9
HINF71421 ncbi Haemophilus influenzae Rd KW209
HINF281310 ncbi Haemophilus influenzae 86-028NP9
HHAL349124 ncbi Halorhodospira halophila SL19
HDUC233412 ncbi Haemophilus ducreyi 35000HP8
HCHE349521 ncbi Hahella chejuensis KCTC 23969
HARS204773 ncbi Herminiimonas arsenicoxydans9
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-28
GSUL243231 ncbi Geobacter sulfurreducens PCA9
GOXY290633 ncbi Gluconobacter oxydans 621H9
GMET269799 ncbi Geobacter metallireducens GS-158
GKAU235909 ncbi Geobacillus kaustophilus HTA4268
GBET391165 ncbi Granulibacter bethesdensis CGDNIH19
ESP42895 Enterobacter sp.9
ELIT314225 ncbi Erythrobacter litoralis HTCC25948
ECOO157 ncbi Escherichia coli O157:H7 EDL9339
ECOL83334 Escherichia coli O157:H79
ECOL439855 ncbi Escherichia coli SMS-3-59
ECOL405955 ncbi Escherichia coli APEC O18
ECOL364106 ncbi Escherichia coli UTI899
ECOL362663 ncbi Escherichia coli 5369
ECOL316407 ncbi Escherichia coli K-12 substr. W31109
ECOL199310 ncbi Escherichia coli CFT0738
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10439
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough9
DPSY177439 ncbi Desulfotalea psychrophila LSv548
DHAF138119 ncbi Desulfitobacterium hafniense Y518
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G208
DARO159087 ncbi Dechloromonas aromatica RCB9
CVIO243365 ncbi Chromobacterium violaceum ATCC 124729
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA8
CTET212717 ncbi Clostridium tetani E888
CTEP194439 ncbi Chlorobium tepidum TLS8
CSAL290398 ncbi Chromohalobacter salexigens DSM 30439
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)8
CPSY167879 ncbi Colwellia psychrerythraea 34H9
CPER289380 ncbi Clostridium perfringens SM1018
CPER195103 ncbi Clostridium perfringens ATCC 131248
CPER195102 ncbi Clostridium perfringens 138
CKLU431943 ncbi Clostridium kluyveri DSM 5558
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29018
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334068
CEFF196164 ncbi Corynebacterium efficiens YS-3148
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131299
CCHL340177 ncbi Chlorobium chlorochromatii CaD38
CBOT498213 ncbi Clostridium botulinum B1 str. Okra8
CBOT441772 ncbi Clostridium botulinum F str. Langeland8
CBOT441771 ncbi Clostridium botulinum A str. Hall8
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193978
CBOT36826 Clostridium botulinum A8
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN8
CBLO203907 ncbi Candidatus Blochmannia floridanus8
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80528
CAULO ncbi Caulobacter crescentus CB159
BWEI315730 ncbi Bacillus weihenstephanensis KBAB48
BVIE269482 ncbi Burkholderia vietnamiensis G49
BTHU412694 ncbi Bacillus thuringiensis Al Hakam8
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-278
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54828
BTHA271848 ncbi Burkholderia thailandensis E2649
BSUI204722 ncbi Brucella suis 13308
BSP376 Bradyrhizobium sp.9
BSP36773 Burkholderia sp.9
BPSE320372 ncbi Burkholderia pseudomallei 1710b9
BPSE272560 ncbi Burkholderia pseudomallei K962439
BPER257313 ncbi Bordetella pertussis Tohama I9
BPAR257311 ncbi Bordetella parapertussis 128229
BOVI236 Brucella ovis8
BMEL359391 ncbi Brucella melitensis biovar Abortus 23088
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M8
BMAL320388 ncbi Burkholderia mallei SAVP19
BMAL243160 ncbi Burkholderia mallei ATCC 233449
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1109
BHAL272558 ncbi Bacillus halodurans C-1258
BFRA295405 ncbi Bacteroides fragilis YCH468
BFRA272559 ncbi Bacteroides fragilis NCTC 93438
BCLA66692 ncbi Bacillus clausii KSM-K168
BCER405917 Bacillus cereus W8
BCER315749 ncbi Bacillus cytotoxicus NVH 391-988
BCER288681 ncbi Bacillus cereus E33L8
BCEN331272 ncbi Burkholderia cenocepacia HI24249
BBRO257310 ncbi Bordetella bronchiseptica RB509
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1008
BAVI360910 ncbi BAVI3609109
BANT261594 ncbi Bacillus anthracis Ames Ancestor8
BANT260799 ncbi Bacillus anthracis Sterne8
BAMB398577 ncbi Burkholderia ambifaria MC40-69
BAMB339670 ncbi Burkholderia ambifaria AMMD9
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9418
AVAR240292 ncbi Anabaena variabilis ATCC 294138
ASP76114 ncbi Aromatoleum aromaticum EbN19
ASP62977 ncbi Acinetobacter sp. ADP19
ASP62928 ncbi Azoarcus sp. BH729
ASP232721 ncbi Acidovorax sp. JS429
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4499
APLE416269 ncbi Actinobacillus pleuropneumoniae L209
AMET293826 ncbi Alkaliphilus metalliredigens QYMF8
AHYD196024 Aeromonas hydrophila dhakensis9
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232709
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-19
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C9
ACRY349163 ncbi Acidiphilium cryptum JF-59
ABOR393595 ncbi Alcanivorax borkumensis SK29
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3459
AAVE397945 ncbi Acidovorax citrulli AAC00-18


Names of the homologs of the genes in the group in each of these orgs
  EG12715   EG12436   EG11539   EG11411   EG11033   EG10901   EG10861   EG10335   EG10139   
ZMOB264203 ZMO1150ZMO1149ZMO1154ZMO0766ZMO1155ZMO1156ZMO1004ZMO1153ZMO1151
YPSE273123 YPTB2999YPTB2996YPTB3001YPTB3005YPTB3002YPTB3003YPTB2989YPTB3000YPTB2997
YPES386656 YPDSF_1664YPDSF_1661YPDSF_1666YPDSF_1671YPDSF_1668YPDSF_1669YPDSF_1654YPDSF_1665YPDSF_1662
YPES377628 YPN_2952YPN_2949YPN_2954YPN_2959YPN_2956YPN_2957YPN_2942YPN_2953YPN_2950
YPES360102 YPA_0524YPA_0527YPA_0522YPA_0516YPA_0520YPA_0518YPA_0534YPA_0523YPA_0526
YPES349746 YPANGOLA_A3431YPANGOLA_A3428YPANGOLA_A3433YPANGOLA_A3437YPANGOLA_A3434YPANGOLA_A3435YPANGOLA_A3421YPANGOLA_A3432YPANGOLA_A3429
YPES214092 YPO1048YPO1051YPO1046YPO1042YPO1045YPO1044YPO1058YPO1047YPO1050
YPES187410 Y3131Y3128Y3134Y3139Y3135Y3137Y3121Y3133Y3129
YENT393305 YE3280YE3277YE3282YE3286YE3283YE3284YE3270YE3281YE3278
XORY360094 XOOORF_3032XOOORF_3033XOOORF_3028XOOORF_3017XOOORF_3026XOOORF_3025XOOORF_3040XOOORF_3029XOOORF_3031
XORY342109 XOO1860XOO1859XOO1864XOO1875XOO1866XOO1867XOO1853XOO1863XOO1861
XORY291331 XOO1970XOO1969XOO1974XOO1984XOO1976XOO1977XOO1963XOO1973XOO1971
XFAS183190 PD_0328PD_0327PD_0337PD_1959PD_1960PD_0321PD_0331PD_0329
XFAS160492 XF1048XF1047XF1058XF2579XF2580XF1041XF1051XF1049
XCAM316273 XCAORF_1634XCAORF_1633XCAORF_1638XCAORF_1650XCAORF_1641XCAORF_1642XCAORF_1626XCAORF_1637XCAORF_1635
XCAM314565 XC_2871XC_2872XC_2867XC_2855XC_2864XC_2863XC_2879XC_2868XC_2870
XCAM190485 XCC1367XCC1366XCC1371XCC1383XCC1374XCC1375XCC1359XCC1370XCC1368
XAXO190486 XAC1415XAC1414XAC1419XAC1429XAC1421XAC1422XAC1407XAC1418XAC1416
WSUC273121 WS0812WS2224WS0238WS0021WS0193WS0194WS1718WS0314
VVUL216895 VV1_1866VV1_1867VV1_1861VV1_1857VV1_1860VV1_1859VV1_1874VV1_1862VV1_1865
VVUL196600 VV2551VV2550VV2555VV2559VV2556VV2557VV2543VV2554VV2552
VPAR223926 VP2312VP2311VP2316VP2320VP2317VP2318VP2304VP2315VP2313
VFIS312309 VF1956VF1955VF1960VF1964VF1961VF1962VF1948VF1959VF1957
VEIS391735 VEIS_1444VEIS_1445VEIS_1440VEIS_3611VEIS_1439VEIS_1438VEIS_1452VEIS_1441VEIS_1443
VCHO VC2254VC2253VC2258VC2262VC2259VC2260VC2246VC2257VC2255
TERY203124 TERY_0416TERY_3268TERY_3779TERY_1160TERY_1161TERY_0482TERY_3778TERY_1291
TELO197221 TLR1040TLL1642TLL0260TLL1687TLL1688TLL0663TLL0259TLL2108
TDEN292415 TBD_0791TBD_0792TBD_0787TBD_0783TBD_0786TBD_0785TBD_0799TBD_0788TBD_0790
TCRU317025 TCR_1279TCR_1283TCR_1287TCR_1284TCR_1285TCR_1272TCR_1282TCR_1280
SWOL335541 SWOL_0889SWOL_0890SWOL_0884SWOL_0883SWOL_0882SWOL_1478SWOL_0885SWOL_0887
STYP99287 STM0220STM0223STM0218STM0214STM0217STM0216STM0230STM0219STM0222
STRO369723 STROP_1350STROP_1351STROP_1324STROP_1300STROP_1323STROP_1322STROP_1312STROP_1325STROP_1326
STHE292459 STH1499STH1500STH1493STH1492STH1491STH1474STH1494STH1497
SSP94122 SHEWANA3_2809SHEWANA3_2808SHEWANA3_2813SHEWANA3_2817SHEWANA3_2814SHEWANA3_2815SHEWANA3_2801SHEWANA3_2812SHEWANA3_2810
SSP292414 TM1040_1410TM1040_1409TM1040_1414TM1040_0446TM1040_1211TM1040_1210TM1040_2650TM1040_1413
SSP1148 SLL0019SLR1821SLL0144SLL1261SLL1260SLR1130SLL0145SLR1369
SSON300269 SSO_0185SSO_0188SSO_0183SSO_0179SSO_0182SSO_0181SSO_0195SSO_0184SSO_0187
SRUB309807 SRU_1849SRU_1848SRU_0034SRU_0035SRU_0036SRU_2372SRU_0033SRU_1714
SONE211586 SO_1635SO_1636SO_1631SO_1626SO_1630SO_1629SO_1643SO_1632SO_1634
SMEL266834 SMC03105SMC02095SMC02099SMC01124SMC02100SMC02101SMC00867SMC02098SMC02096
SMED366394 SMED_2879SMED_1137SMED_1133SMED_0031SMED_1132SMED_1131SMED_0451SMED_1134SMED_1136
SLOI323850 SHEW_2629SHEW_2628SHEW_2633SHEW_2637SHEW_2634SHEW_2635SHEW_2621SHEW_2632SHEW_2630
SHIGELLA YAEMYAELPYRHGLNDTSFRPSBRNHBFRRCDSA
SGLO343509 SG1939SG1936SG1941SG1945SG1942SG1943SG1929SG1940SG1937
SFLE373384 SFV_0156SFV_0159SFV_0154SFV_0150SFV_0153SFV_0152SFV_0166SFV_0155SFV_0158
SFLE198214 AAN41825.1AAN41828.1AAN41823.1AAN41819.1AAN41822.1AAN41821.1AAN41835.1AAN41824.1AAN41827.1
SERY405948 SACE_5994SACE_5993SACE_6036SACE_6037SACE_6038SACE_6047SACE_6035SACE_6034
SENT321314 SCH_0220SCH_0223SCH_0218SCH_0214SCH_0217SCH_0216SCH_0230SCH_0219SCH_0222
SENT295319 SPA0227SPA0230SPA0225SPA0220SPA0224SPA0223SPA0237SPA0226SPA0229
SENT220341 STY0243STY0246STY0241STY0237STY0240STY0239STY0253STY0242STY0245
SENT209261 T0221T0224T0219T0215T0218T0217T0231T0220T0223
SELO269084 SYC2498_DSYC1070_DSYC1014_CSYC1579_CSYC1580_CSYC0661_CSYC1013_CSYC1121_D
SELO1140 SYNPCC7942_1513SYNPCC7942_0448SYNPCC7942_0506SYNPCC7942_2531SYNPCC7942_2530SYNPCC7942_0879SYNPCC7942_0507SYNPCC7942_0394
SDYS300267 SDY_0189SDY_0192SDY_0187SDY_0183SDY_0186SDY_0185SDY_0199SDY_0188SDY_0191
SDEG203122 SDE_2591SDE_2590SDE_2595SDE_2602SDE_2596SDE_2597SDE_2583SDE_2594SDE_2592
SCOE100226 SCO5694SCO5626SCO5585SCO5625SCO5624SCO5812SCO5627SCO5628
SBOY300268 SBO_0161SBO_0164SBO_0159SBO_0155SBO_0158SBO_0157SBO_0171SBO_0160SBO_0163
SAVE227882 SAV2563SAV2625SAV2649SAV2626SAV2627SAV2453SAV2624SAV2623
SALA317655 SALA_1954SALA_1953SALA_1958SALA_2787SALA_1959SALA_1960SALA_0963SALA_1957SALA_1955
RSPH349102 RSPH17025_2149RSPH17025_2148RSPH17025_2153RSPH17025_0469RSPH17025_1511RSPH17025_1510RSPH17025_0067RSPH17025_2152RSPH17025_2150
RSPH349101 RSPH17029_1366RSPH17029_1367RSPH17029_1362RSPH17029_0458RSPH17029_1432RSPH17029_1433RSPH17029_0120RSPH17029_1363RSPH17029_1365
RSPH272943 RSP_2709RSP_2710RSP_2705RSP_1811RSP_2861RSP_2860RSP_1470RSP_2706RSP_2708
RSOL267608 RSC1410RSC1411RSC1406RSC1402RSC1405RSC1404RSC1418RSC1407RSC1409
RRUB269796 RRU_A1592RRU_A1593RRU_A1588RRU_A3539RRU_A1587RRU_A1586RRU_A3209RRU_A1589RRU_A1591
RPOM246200 SPO_1667SPO_1668SPO_1662SPO_0397SPO_1975SPO_1976SPO_3452SPO_1664SPO_1666
RPAL316057 RPD_2851RPD_2850RPD_2855RPD_0116RPD_2856RPD_2857RPD_1208RPD_2854RPD_2852
RPAL316056 RPC_2442RPC_2443RPC_2438RPC_0342RPC_2437RPC_2436RPC_4361RPC_2439RPC_2441
RPAL316055 RPE_2559RPE_2560RPE_2555RPE_0260RPE_2554RPE_2553RPE_4424RPE_2556RPE_2558
RPAL258594 RPA2916RPA2915RPA2920RPA0591RPA2921RPA2922RPA1034RPA2919RPA2917
RMET266264 RMET_1441RMET_1442RMET_1437RMET_1433RMET_1436RMET_1435RMET_1449RMET_1438RMET_1440
RLEG216596 RL4372RL2227RL2223RL0405RL2222RL2221RL0930RL2224RL2226
RFER338969 RFER_1994RFER_1995RFER_1991RFER_2422RFER_1990RFER_1989RFER_2002RFER_1992RFER_1993
REUT381666 H16_A2049H16_A2048H16_A2053H16_A2057H16_A2054H16_A2055H16_A2041H16_A2052H16_A2088
REUT264198 REUT_A1875REUT_A1874REUT_A1879REUT_A1883REUT_A1880REUT_A1881REUT_A1867REUT_A1878REUT_B4016
RETL347834 RHE_CH03839RHE_CH01919RHE_CH01915RHE_CH00387RHE_CH01914RHE_CH01913RHE_CH00868RHE_CH01916RHE_CH01918
RDEN375451 RD1_2590RD1_2591RD1_2585RD1_1188RD1_2652RD1_2653RD1_0300RD1_2586
PTHE370438 PTH_1260PTH_1261PTH_1254PTH_1253PTH_1252PTH_1708PTH_1255PTH_1258
PSYR223283 PSPTO_1540PSPTO_1541PSPTO_1536PSPTO_1532PSPTO_1535PSPTO_1534PSPTO_1548PSPTO_1537PSPTO_1539
PSYR205918 PSYR_1349PSYR_1350PSYR_1345PSYR_1341PSYR_1344PSYR_1343PSYR_1357PSYR_1346PSYR_1348
PSTU379731 PST_1543PST_1544PST_1539PST_1535PST_1538PST_1537PST_1551PST_1540PST_1542
PSP312153 PNUC_1445PNUC_1444PNUC_1449PNUC_1453PNUC_1450PNUC_1451PNUC_1437PNUC_1448PNUC_1446
PSP296591 BPRO_2689BPRO_2688BPRO_2693BPRO_2588BPRO_2694BPRO_2695BPRO_2681BPRO_2692BPRO_2690
PPUT351746 PPUT_4180PPUT_4179PPUT_4184PPUT_4188PPUT_4185PPUT_4186PPUT_4172PPUT_4183PPUT_4181
PPUT160488 PP_1597PP_1598PP_1593PP_1589PP_1592PP_1591PP_1605PP_1594PP_1596
PPRO298386 PBPRA2962PBPRA2961PBPRA2966PBPRA2970PBPRA2967PBPRA2968PBPRA2954PBPRA2965PBPRA2963
PNAP365044 PNAP_1764PNAP_1765PNAP_1760PNAP_1819PNAP_1759PNAP_1758PNAP_1772PNAP_1761PNAP_1763
PMEN399739 PMEN_3047PMEN_3046PMEN_3051PMEN_3055PMEN_3052PMEN_3053PMEN_3039PMEN_3050PMEN_3048
PLUM243265 PLU0676PLU0679PLU0674PLU0670PLU0673PLU0672PLU0686PLU0675PLU0678
PHAL326442 PSHAA2030PSHAA2029PSHAA2034PSHAA2038PSHAA2035PSHAA2036PSHAA2016PSHAA2033PSHAA2031
PGIN242619 PG_1364PG_0383PG_1902PG_0378PG_0377PG_0736PG_1901PG_0046
PFLU220664 PFL_1182PFL_1183PFL_1178PFL_1174PFL_1177PFL_1176PFL_1190PFL_1179PFL_1181
PFLU205922 PFL_1107PFL_1108PFL_1103PFL_1099PFL_1102PFL_1101PFL_1115PFL_1104PFL_1106
PENT384676 PSEEN4214PSEEN4213PSEEN4218PSEEN4222PSEEN4219PSEEN4220PSEEN4206PSEEN4217PSEEN4215
PDIS435591 BDI_0480BDI_0481BDI_3371BDI_3490BDI_3489BDI_3545BDI_3376BDI_1855
PCRY335284 PCRYO_1710PCRYO_1709PCRYO_1714PCRYO_0441PCRYO_0390PCRYO_0389PCRYO_1505PCRYO_1713PCRYO_1711
PCAR338963 PCAR_1915PCAR_1914PCAR_1919PCAR_1512PCAR_1920PCAR_1921PCAR_2218PCAR_1918PCAR_1916
PATL342610 PATL_1255PATL_1256PATL_1251PATL_1247PATL_1250PATL_1249PATL_1263PATL_1252PATL_1254
PARC259536 PSYC_1531PSYC_1530PSYC_1535PSYC_0395PSYC_0351PSYC_0350PSYC_1534PSYC_1532
PAER208964 PA3650PA3649PA3654PA3658PA3655PA3656PA3642PA3653PA3651
PAER208963 PA14_17130PA14_17140PA14_17080PA14_17040PA14_17070PA14_17060PA14_17230PA14_17100PA14_17120
OCAR504832 OCAR_5961OCAR_5962OCAR_5957OCAR_4129OCAR_5956OCAR_5955OCAR_6972OCAR_5958OCAR_5960
NWIN323098 NWI_1853NWI_1852NWI_1857NWI_0133NWI_1858NWI_1859NWI_2598NWI_1856NWI_1854
NSP35761 NOCA_3204NOCA_3241NOCA_3267NOCA_3242NOCA_3243NOCA_3253NOCA_3240NOCA_3239
NSP103690 ALR4351ALL3971ALR1207ALL4791ALL4792ALR4332ALR1208ALL3875
NMUL323848 NMUL_A0663NMUL_A0664NMUL_A0659NMUL_A2633NMUL_A0658NMUL_A0657NMUL_A0668NMUL_A0660NMUL_A0662
NMEN272831 NMC0175NMC0174NMC2082NMC1104NMC2081NMC2080NMC0183NMC0178NMC0176
NMEN122587 NMA0083NMA0084NMA0326NMA1374NMA0327NMA0328NMA0075NMA0080NMA0082
NMEN122586 NMB_0184NMB_0183NMB_2103NMB_1203NMB_2102NMB_2101NMB_0192NMB_0187NMB_0185
NHAM323097 NHAM_1700NHAM_1701NHAM_1696NHAM_0226NHAM_1695NHAM_1694NHAM_3221NHAM_1697NHAM_1699
NGON242231 NGO1799NGO1800NGO1973NGO0798NGO1974NGO1975NGO1789NGO1796NGO1798
NFAR247156 NFA41200NFA41190NFA41290NFA41620NFA41300NFA41310NFA41450NFA41280
NEUR228410 NE1712NE1711NE1716NE1717NE1718NE1707NE1715NE1713
MVAN350058 MVAN_2260MVAN_2261MVAN_2220MVAN_2180MVAN_2210MVAN_2209MVAN_2194MVAN_2221
MTUB419947 MRA_2895MRA_2894MRA_2908MRA_2943MRA_2914MRA_2915MRA_2927MRA_2907MRA_2906
MTUB336982 TBFG_12886TBFG_12885TBFG_12897TBFG_12932TBFG_12903TBFG_12904TBFG_12916TBFG_12896TBFG_12895
MTBRV RV2870CRV2869CRV2883CRV2918CRV2889CRV2890CRV2902CRV2882CRV2881C
MTBCDC MT2938MT2937MT2951MT2986MT2957MT2958MT2970MT2949MT2948
MSP400668 MMWYL1_1278MMWYL1_1279MMWYL1_1274MMWYL1_1270MMWYL1_1273MMWYL1_1272MMWYL1_1286MMWYL1_1275MMWYL1_1277
MSP189918 MKMS_2088MKMS_2089MKMS_2049MKMS_2004MKMS_2040MKMS_2039MKMS_2018MKMS_2050MKMS_2051
MSP164756 MMCS_2042MMCS_2043MMCS_2003MMCS_1958MMCS_1994MMCS_1993MMCS_1972MMCS_2004MMCS_2005
MSME246196 MSMEG_2578MSMEG_2579MSMEG_2540MSMEG_2427MSMEG_2520MSMEG_2519MSMEG_2442MSMEG_2541
MPET420662 MPE_A1973MPE_A1972MPE_A1977MPE_A1759MPE_A1978MPE_A1979MPE_B0154MPE_A1976MPE_A1974
MMAR394221 MMAR10_1386MMAR10_1387MMAR10_1382MMAR10_3022MMAR10_1381MMAR10_1380MMAR10_2192MMAR10_1383MMAR10_1385
MMAG342108 AMB2492AMB2491AMB2496AMB4476AMB2497AMB2498AMB3989AMB2495AMB2493
MLOT266835 MLL0638MLL0643MLL5321MLL0650MLL0651MLL7416MLL0642MLL0639
MLEP272631 ML1583ML1582ML1591ML1597ML1598ML1611ML1590ML1589
MGIL350054 MFLV_4083MFLV_4082MFLV_4124MFLV_4183MFLV_4132MFLV_4133MFLV_4168MFLV_4123
MFLA265072 MFLA_1524MFLA_1523MFLA_1528MFLA_1532MFLA_1529MFLA_1530MFLA_1516MFLA_1527MFLA_1525
MCAP243233 MCA_0573MCA_0574MCA_0569MCA_0565MCA_0568MCA_0567MCA_2443MCA_0570MCA_0572
MBOV410289 BCG_2892CBCG_2891CBCG_2904CBCG_2939CBCG_2910CBCG_2911CBCG_2923CBCG_2902C
MBOV233413 MB2895CMB2894CMB2907CMB2942CMB2913CMB2914CMB2926CMB2906CMB2905C
MAQU351348 MAQU_2542MAQU_2541MAQU_2546MAQU_2550MAQU_2547MAQU_2548MAQU_2534MAQU_2545MAQU_2543
LWEL386043 LWE1332LWE1333LWE1328LWE1674LWE1675LWE1290LWE1329LWE1331
LPNE400673 LPC_2840LPC_1141LPC_1154LPC_1142LPC_1143LPC_0789LPC_1140LPC_2841
LPNE297246 LPP0568LPP1677LPP1685LPP1678LPP1679LPP1327LPP1676LPP0567
LPNE297245 LPL0544LPL1671LPL1684LPL1672LPL1673LPL1324LPL1670LPL0543
LPNE272624 LPG0505LPG1712LPG1720LPG1713LPG1714LPG1373LPG1711LPG0504
LMON265669 LMOF2365_1334LMOF2365_1335LMOF2365_1330LMOF2365_1678LMOF2365_1679LMOF2365_1291LMOF2365_1331LMOF2365_1333
LMON169963 LMO1317LMO1318LMO1313LMO1657LMO1658LMO1273LMO1314LMO1316
LINN272626 LIN1354LIN1355LIN1350LIN1766LIN1767LIN1312LIN1351LIN1353
KPNE272620 GKPORF_B4475GKPORF_B4479GKPORF_B4473GKPORF_B4469GKPORF_B4472GKPORF_B4471GKPORF_B4486GKPORF_B4474GKPORF_B4477
JSP375286 MMA_2052MMA_2051MMA_2056MMA_2060MMA_2057MMA_2058MMA_2044MMA_2055MMA_2053
JSP290400 JANN_2455JANN_2454JANN_2460JANN_0897JANN_2305JANN_2306JANN_0391JANN_2458JANN_2456
ILOI283942 IL0839IL0838IL0843IL0847IL0844IL0845IL1670IL0842IL0840
HSOM205914 HS_0985HS_0981HS_0987HS_0829HS_1089HS_1088HS_1357HS_0986HS_0982
HNEP81032 HNE_1774HNE_1775HNE_1770HNE_0518HNE_1769HNE_1768HNE_2755HNE_1771HNE_1773
HINF71421 HI_0807HI_0918HI_1065HI_1719HI_0914HI_0913HI_1059HI_0808HI_0919
HINF281310 NTHI0971NTHI1085NTHI1225NTHI2026NTHI1081NTHI1080NTHI1219NTHI0972NTHI1087
HHAL349124 HHAL_1460HHAL_1459HHAL_1464HHAL_1468HHAL_1465HHAL_1466HHAL_1454HHAL_1463HHAL_1461
HDUC233412 HD_1186HD_1192HD_1597HD_1599HD_1600HD_1026HD_1596HD_1193
HCHE349521 HCH_05246HCH_05245HCH_05251HCH_05255HCH_05252HCH_05253HCH_05237HCH_05249HCH_05247
HARS204773 HEAR1341HEAR1342HEAR1337HEAR1333HEAR1336HEAR1335HEAR1349HEAR1338HEAR1340
GTHE420246 GTNG_1109GTNG_1110GTNG_1105GTNG_1104GTNG_1103GTNG_1058GTNG_1106GTNG_1108
GSUL243231 GSU_1915GSU_1914GSU_1919GSU_1820GSU_1920GSU_1921GSU_0649GSU_1918GSU_1916
GOXY290633 GOX1816GOX1817GOX1812GOX1872GOX0074GOX0075GOX0345GOX1813GOX1815
GMET269799 GMET_1256GMET_1257GMET_1252GMET_1426GMET_1251GMET_1250GMET_2865GMET_1253
GKAU235909 GK1255GK1256GK1251GK1250GK1249GK1205GK1252GK1254
GBET391165 GBCGDNIH1_0938GBCGDNIH1_0939GBCGDNIH1_0934GBCGDNIH1_0415GBCGDNIH1_1278GBCGDNIH1_1279GBCGDNIH1_1858GBCGDNIH1_0935GBCGDNIH1_0937
ESP42895 ENT638_0711ENT638_0714ENT638_0709ENT638_0705ENT638_0708ENT638_0707ENT638_0721ENT638_0710ENT638_0713
ELIT314225 ELI_03805ELI_03810ELI_03785ELI_11825ELI_03770ELI_03765ELI_02270ELI_03790
ECOO157 YAEMYAELPYRHGLNDTSFRPSBRNHBFRRCDSA
ECOL83334 ECS0175ECS0178ECS0173ECS0169ECS0172ECS0171ECS0185ECS0174ECS0177
ECOL439855 ECSMS35_0184ECSMS35_0187ECSMS35_0182ECSMS35_0177ECSMS35_0181ECSMS35_0180ECSMS35_0194ECSMS35_0183ECSMS35_0186
ECOL405955 APECO1_1814APECO1_1811APECO1_1816APECO1_1820APECO1_1818APECO1_1804APECO1_1815APECO1_1812
ECOL364106 UTI89_C0188UTI89_C0191UTI89_C0186UTI89_C0181UTI89_C0185UTI89_C0183UTI89_C0198UTI89_C0187UTI89_C0190
ECOL362663 ECP_0181ECP_0184ECP_0179ECP_0175ECP_0178ECP_0177ECP_0191ECP_0180ECP_0183
ECOL316407 ECK0172:JW0168:B0173ECK0175:JW0171:B0176ECK0170:JW0166:B0171ECK0165:JW0162:B0167ECK0169:JW0165:B0170ECK0168:JW0164:B0169ECK0182:JW0178:B0183ECK0171:JW0167:B0172ECK0174:JW5810:B0175
ECOL199310 C0213C0207C0202C0206C0204C0220C0208C0212
ECAR218491 ECA1035ECA1038ECA1033ECA1029ECA1032ECA1031ECA1045ECA1034ECA1037
DVUL882 DVU_0866DVU_0865DVU_0871DVU_1233DVU_0873DVU_0874DVU_0834DVU_0870DVU_0868
DPSY177439 DP1160DP1161DP1156DP0929DP1154DP2806DP1157DP1159
DHAF138119 DSY2539DSY2538DSY2544DSY2545DSY2546DSY2589DSY2543DSY2541
DDES207559 DDE_1123DDE_1122DDE_1129DDE_2309DDE_1133DDE_1094DDE_1128DDE_1125
DARO159087 DARO_1748DARO_1749DARO_1744DARO_1739DARO_1743DARO_1742DARO_1756DARO_1745DARO_1747
CVIO243365 CV_2202CV_2203CV_2198CV_2917CV_2197CV_2196CV_2210CV_2199CV_2201
CVES412965 COSY_0025COSY_0506COSY_0247COSY_0438COSY_0972COSY_0971COSY_0246COSY_0026
CTET212717 CTC_01268CTC_01269CTC_01263CTC_01262CTC_01261CTC_01255CTC_01264CTC_01266
CTEP194439 CT_0125CT_0124CT_1779CT_1780CT_1781CT_2261CT_1577CT_0233
CSAL290398 CSAL_0569CSAL_0570CSAL_0565CSAL_0561CSAL_0564CSAL_0563CSAL_0577CSAL_0566CSAL_0568
CRUT413404 RMAG_0025RMAG_0552RMAG_0262RMAG_0475RMAG_1073RMAG_1072RMAG_0261RMAG_0026
CPSY167879 CPS_1559CPS_1560CPS_1555CPS_1549CPS_1554CPS_1553CPS_1569CPS_1556CPS_1558
CPER289380 CPR_1666CPR_1665CPR_1670CPR_1671CPR_1672CPR_1678CPR_1669CPR_1667
CPER195103 CPF_1948CPF_1947CPF_1952CPF_1953CPF_1954CPF_1960CPF_1951CPF_1949
CPER195102 CPE1694CPE1693CPE1698CPE1699CPE1700CPE1706CPE1697CPE1695
CKLU431943 CKL_1423CKL_1424CKL_1419CKL_1418CKL_1417CKL_1409CKL_1420CKL_1422
CHYD246194 CHY_1778CHY_1777CHY_1785CHY_1786CHY_1787CHY_1426CHY_1784CHY_1780
CHUT269798 CHU_2996CHU_2995CHU_0577CHU_3036CHU_3037CHU_2825CHU_0578CHU_0358
CEFF196164 CE1905CE1911CE1966CE1914CE1915CE1925CE1910CE1909
CDIP257309 DIP1500DIP1499DIP1506DIP1534DIP1507DIP1508DIP1515DIP1505DIP1504
CCHL340177 CAG_0008CAG_0009CAG_1646CAG_1647CAG_1648CAG_1993CAG_0326CAG_1470
CBOT498213 CLD_2214CLD_2215CLD_2207CLD_2206CLD_2205CLD_2199CLD_2208CLD_2210
CBOT441772 CLI_2482CLI_2481CLI_2489CLI_2490CLI_2491CLI_2497CLI_2488CLI_2486
CBOT441771 CLC_2273CLC_2272CLC_2280CLC_2282CLC_2283CLC_2289CLC_2279CLC_2277
CBOT441770 CLB_2290CLB_2289CLB_2297CLB_2298CLB_2299CLB_2305CLB_2296CLB_2294
CBOT36826 CBO2426CBO2425CBO2433CBO2434CBO2435CBO2441CBO2432CBO2430
CBLO291272 BPEN_283BPEN_286BPEN_281BPEN_280BPEN_279BPEN_293BPEN_282BPEN_285
CBLO203907 BFL275BFL278BFL273BFL272BFL271BFL285BFL274BFL277
CBEI290402 CBEI_1195CBEI_1196CBEI_1190CBEI_1189CBEI_1188CBEI_1182CBEI_1191CBEI_1193
CAULO CC1917CC1916CC1921CC0013CC1922CC1923CC0379CC1920CC1918
BWEI315730 BCERKBAB4_3644BCERKBAB4_3643BCERKBAB4_3648BCERKBAB4_3649BCERKBAB4_3650BCERKBAB4_3660BCERKBAB4_3647BCERKBAB4_3645
BVIE269482 BCEP1808_1919BCEP1808_1918BCEP1808_1923BCEP1808_1928BCEP1808_1924BCEP1808_1925BCEP1808_1911BCEP1808_1922BCEP1808_1920
BTHU412694 BALH_3451BALH_3450BALH_3456BALH_3457BALH_3458BALH_3468BALH_3455BALH_3453
BTHU281309 BT9727_3562BT9727_3561BT9727_3566BT9727_3567BT9727_3568BT9727_3578BT9727_3565BT9727_3563
BTHE226186 BT_2002BT_2001BT_2242BT_3878BT_3877BT_3412BT_2249BT_4463
BTHA271848 BTH_I2033BTH_I2034BTH_I2029BTH_I2025BTH_I2028BTH_I2027BTH_I2041BTH_I2030BTH_I2032
BSUI204722 BR_1156BR_1160BR_0144BR_1161BR_1162BR_0386BR_1159BR_1157
BSP376 BRADO4134BRADO4133BRADO4138BRADO0530BRADO4139BRADO4140BRADO2017BRADO4137BRADO4135
BSP36773 BCEP18194_A5323BCEP18194_A5322BCEP18194_A5327BCEP18194_A5331BCEP18194_A5328BCEP18194_A5329BCEP18194_A5315BCEP18194_A5326BCEP18194_A5324
BPSE320372 BURPS1710B_A2800BURPS1710B_A2798BURPS1710B_A2804BURPS1710B_A2809BURPS1710B_A2805BURPS1710B_A2806BURPS1710B_A2791BURPS1710B_A2803BURPS1710B_A2801
BPSE272560 BPSL2153BPSL2152BPSL2157BPSL2161BPSL2158BPSL2159BPSL2145BPSL2156BPSL2154
BPER257313 BP1425BP1426BP1421BP1417BP1420BP1419BP1433BP1422BP1424
BPAR257311 BPP1533BPP1534BPP1529BPP1525BPP1528BPP1527BPP1541BPP1530BPP1532
BOVI236 GBOORF1156GBOORF1160GBOORF0148GBOORF1161GBOORF1162GBOORF0417GBOORF1159GBOORF1157
BMEL359391 BAB1_1178BAB1_1182BAB1_0143BAB1_1183BAB1_1184BAB1_0415BAB1_1181BAB1_1179
BMEL224914 BMEI0829BMEI0825BMEI1804BMEI0824BMEI0823BMEI1542BMEI0826BMEI0828
BMAL320388 BMASAVP1_A2050BMASAVP1_A2048BMASAVP1_A2054BMASAVP1_A2059BMASAVP1_A2055BMASAVP1_A2056BMASAVP1_A2041BMASAVP1_A2053BMASAVP1_A2051
BMAL243160 BMA_1549BMA_1548BMA_1553BMA_1557BMA_1554BMA_1555BMA_1541BMA_1552BMA_1550
BJAP224911 BLL4855BLL4854BLL4859BLL0916BLL4860BLL4861BLR2521BLL4858BLL4856
BHAL272558 BH2421BH2420BH2425BH2426BH2427BH2475BH2424BH2422
BFRA295405 BF3699BF3698BF0697BF4010BF4011BF0290BF0689BF3587
BFRA272559 BF3492BF3491BF0626BF3784BF3785BF0239BF0619BF3391
BCLA66692 ABC2236ABC2235ABC2240ABC2241ABC2242ABC2284ABC2239ABC2237
BCER405917 BCE_3862BCE_3861BCE_3866BCE_3867BCE_3868BCE_3879BCE_3865BCE_3863
BCER315749 BCER98_2128BCER98_2472BCER98_2477BCER98_2478BCER98_2479BCER98_2489BCER98_2476BCER98_2474
BCER288681 BCE33L3580BCE33L3579BCE33L3584BCE33L3585BCE33L3586BCE33L3596BCE33L3583BCE33L3581
BCEN331272 BCEN2424_2013BCEN2424_2012BCEN2424_2017BCEN2424_2021BCEN2424_2018BCEN2424_2019BCEN2424_2005BCEN2424_2016BCEN2424_2014
BBRO257310 BB2611BB2612BB2607BB2603BB2606BB2605BB2619BB2608BB2610
BBAC264462 BD3787BD3783BD1955BD3782BD3780BD2116BD3784BD3786
BAVI360910 BAV1740BAV1741BAV1736BAV1732BAV1735BAV1734BAV1748BAV1737BAV1739
BANT261594 GBAA3959GBAA3958GBAA3963GBAA3964GBAA3965GBAA3975GBAA3962GBAA3960
BANT260799 BAS3672BAS3671BAS3676BAS3677BAS3678BAS3688BAS3675BAS3673
BAMB398577 BAMMC406_1915BAMMC406_1914BAMMC406_1919BAMMC406_1923BAMMC406_1920BAMMC406_1921BAMMC406_1907BAMMC406_1918BAMMC406_1916
BAMB339670 BAMB_2046BAMB_2045BAMB_2050BAMB_2054BAMB_2051BAMB_2052BAMB_2038BAMB_2049BAMB_2047
BABO262698 BRUAB1_1162BRUAB1_1166BRUAB1_0141BRUAB1_1167BRUAB1_1168BRUAB1_0411BRUAB1_1165BRUAB1_1163
AVAR240292 AVA_1300AVA_1730AVA_0628AVA_2060AVA_2061AVA_1282AVA_0629AVA_1818
ASP76114 EBA5994EBA5995EBA5988EBA5982EBA5987EBA5986EBA6003EBA5990EBA5992
ASP62977 ACIAD1376ACIAD1377ACIAD1372ACIAD2079ACIAD2268ACIAD2269ACIAD1248ACIAD1373ACIAD1375
ASP62928 AZO1903AZO1902AZO1907AZO1911AZO1908AZO1909AZO1895AZO1906AZO1904
ASP232721 AJS_2579AJS_2578AJS_2583AJS_2294AJS_2584AJS_2585AJS_2571AJS_2582AJS_2580
ASAL382245 ASA_3154ASA_3153ASA_3158ASA_3163ASA_3159ASA_3160ASA_3146ASA_3157ASA_3155
APLE416269 APL_0406APL_0412APL_0569APL_0598APL_0567APL_0566APL_0129APL_0570APL_0413
AMET293826 AMET_2682AMET_2681AMET_2687AMET_2688AMET_2689AMET_2740AMET_2686AMET_2683
AHYD196024 AHA_1179AHA_1180AHA_1175AHA_1171AHA_1174AHA_1173AHA_1187AHA_1176AHA_1178
AFER243159 AFE_1634AFE_1633AFE_1638AFE_2122AFE_1639AFE_1640AFE_1624AFE_1637AFE_1635
AEHR187272 MLG_1857MLG_1856MLG_1861MLG_1865MLG_1862MLG_1863MLG_1850MLG_1860MLG_1858
ADEH290397 ADEH_3583ADEH_3582ADEH_0280ADEH_1692ADEH_0272ADEH_0273ADEH_0278ADEH_0281ADEH_3584
ACRY349163 ACRY_2557ACRY_2558ACRY_2553ACRY_0914ACRY_1695ACRY_1694ACRY_0639ACRY_2554ACRY_2556
ABOR393595 ABO_1149ABO_1150ABO_1145ABO_1141ABO_1144ABO_1143ABO_1157ABO_1146ABO_1148
ABAC204669 ACID345_1419ACID345_1420ACID345_0259ACID345_1488ACID345_0565ACID345_0563ACID345_2878ACID345_0261ACID345_1418
AAVE397945 AAVE_1829AAVE_1830AAVE_1825AAVE_3101AAVE_1824AAVE_1823AAVE_1837AAVE_1826


Organism features enriched in list (features available for 239 out of the 250 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00292343173
Arrangment:Clusters 0.0000546115
Endospores:No 1.205e-1142130
GC_Content_Range4:0-40 8.061e-2438153
GC_Content_Range4:40-60 0.0000564107156
GC_Content_Range4:60-100 1.378e-1294112
GC_Content_Range7:0-30 0.00002051142
GC_Content_Range7:30-40 7.296e-1627111
GC_Content_Range7:50-60 9.455e-76277
GC_Content_Range7:60-70 6.711e-1389104
Genome_Size_Range5:0-2 3.561e-367106
Genome_Size_Range5:4-6 1.177e-20118134
Genome_Size_Range5:6-10 6.512e-63641
Genome_Size_Range9:0-1 0.0000110323
Genome_Size_Range9:1-2 4.921e-29483
Genome_Size_Range9:2-3 0.00058283585
Genome_Size_Range9:3-4 0.00065984255
Genome_Size_Range9:4-5 3.426e-96576
Genome_Size_Range9:5-6 6.455e-105358
Genome_Size_Range9:6-8 1.034e-63133
Gram_Stain:+ 3.258e-847128
Gram_Stain:- 8.472e-9171252
Group:Betaproteobacteria 1.031e-93940
Group:Epsilonproteobacteria 0.005947919
Group:Firmicutes 3.514e-1230107
Group:Gammaproteobacteria 2.022e-1391106
Habitat:Host-associated 3.905e-871173
Habitat:Multiple 0.000437790132
Motility:No 5.675e-940117
Motility:Yes 8.764e-13139183
Optimal_temp.:25-30 0.00008941616
Optimal_temp.:30-37 0.0004229318
Optimal_temp.:35-37 0.00096311212
Oxygen_Req:Aerobic 0.000430293137
Pathogenic_in:Human 0.000804580168
Pathogenic_in:No 0.0003068100148
Shape:Coccus 3.872e-111058
Shape:Rod 1.422e-18194267
Shape:Sphere 0.0000546115
Shape:Spiral 0.0055757621



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 46
Effective number of orgs (counting one per cluster within 166 clusters): 31

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 131
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278151
UMET351160 uncultured methanogenic archaeon RC-I0
TVOL273116 Thermoplasma volcanium GSS10
TKOD69014 Thermococcus kodakarensis KOD10
TACI273075 Thermoplasma acidophilum DSM 17280
STOK273063 Sulfolobus tokodaii 70
SSOL273057 Sulfolobus solfataricus P20
SMAR399550 Staphylothermus marinus F10
SACI330779 Sulfolobus acidocaldarius DSM 6390
PTOR263820 Picrophilus torridus DSM 97900
PISL384616 Pyrobaculum islandicum DSM 41840
PHOR70601 Pyrococcus horikoshii OT30
PFUR186497 Pyrococcus furiosus DSM 36380
PAER178306 Pyrobaculum aerophilum IM20
PABY272844 Pyrococcus abyssi GE50
MTHE349307 Methanosaeta thermophila PT0
MTHE187420 Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 531
MSTA339860 Methanosphaera stadtmanae DSM 30910
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP1
MPNE272634 ncbi Mycoplasma pneumoniae M1291
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 Methanosarcina mazei Go10
MMAR426368 Methanococcus maripaludis C70
MMAR402880 Methanococcus maripaludis C50
MMAR267377 Methanococcus maripaludis S20
MLAB410358 Methanocorpusculum labreanum Z0
MKAN190192 Methanopyrus kandleri AV190
MHYO295358 ncbi Mycoplasma hyopneumoniae 2321
MHYO262722 ncbi Mycoplasma hyopneumoniae 74481
MHYO262719 ncbi Mycoplasma hyopneumoniae J1
MGEN243273 ncbi Mycoplasma genitalium G371
MBUR259564 Methanococcoides burtonii DSM 62420
MBAR269797 Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-11
MACE188937 Methanosarcina acetivorans C2A0
HWAL362976 Haloquadratum walsbyi DSM 167900
HSP64091 Halobacterium sp. NRC-10
HMAR272569 Haloarcula marismortui ATCC 430490
HBUT415426 Hyperthermus butylicus DSM 54560
CMET456442 Candidatus Methanoregula boonei 6A80
CCAR387662 ncbi Candidatus Carsonella ruddii PV0
BXEN266265 ncbi Burkholderia xenovorans LB4000
APER272557 Aeropyrum pernix K10
AFUL224325 Archaeoglobus fulgidus DSM 43040


Names of the homologs of the genes in the group in each of these orgs
  EG12715   EG12436   EG11539   EG11411   EG11033   EG10901   EG10861   EG10335   EG10139   
UURE95667 UU514
UPAR505682 UPA3_0545
UMET351160
TVOL273116
TKOD69014
TACI273075
STOK273063
SSOL273057
SMAR399550
SACI330779
PTOR263820
PISL384616
PHOR70601
PFUR186497
PAER178306
PABY272844
MTHE349307
MTHE187420
MSYN262723 MS53_0414
MSTA339860
MPUL272635 MYPU_5320
MPNE272634 MPN631
MMOB267748 MMOB1770
MMAZ192952
MMAR426368
MMAR402880
MMAR267377
MLAB410358
MKAN190192
MHYO295358 MHP059
MHYO262722 MHP7448_0056
MHYO262719 MHJ_0052
MGEN243273 MG_433
MBUR259564
MBAR269797
MART243272 MART0052
MACE188937
HWAL362976
HSP64091
HMAR272569
HBUT415426
CMET456442
CCAR387662
BXEN266265
APER272557
AFUL224325


Organism features enriched in list (features available for 12 out of the 46 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Singles 0.003675011218
Disease:Enzootic_pneumonia 0.000743022
Endospores:No 0.000199010130
GC_Content_Range4:0-40 0.000088211153
GC_Content_Range7:0-30 1.775e-6842
Genome_Size_Range5:0-2 1.545e-611106
Genome_Size_Range9:0-1 9.487e-151123
Group:Firmicutes 0.000030610107
Habitat:Host-associated 0.002756510173
Optimal_temp.:37 0.0004867886
Oxygen_Req:Facultative 0.001086010156
Pathogenic_in:Swine 0.000169435
Salinity:Non-halophilic 0.0000335982
Shape:Rod 0.00010151267
Shape:Sphere 4.363e-151015



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 39
Effective number of orgs (counting one per cluster within 166 clusters): 22

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 13129 0.000334810139
MLEP272631 ncbi Mycobacterium leprae TN 0.00042006688
CBLO203907 ncbi Candidatus Blochmannia floridanus 0.00050656848
APHA212042 ncbi Anaplasma phagocytophilum HZ 0.00053374347
MTBCDC ncbi Mycobacterium tuberculosis CDC1551 0.000539810689
MTBRV ncbi Mycobacterium tuberculosis H37Rv 0.000553710719
MTUB336982 ncbi Mycobacterium tuberculosis F11 0.000582310779
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra 0.000597110809
MBOV233413 ncbi Mycobacterium bovis AF2122/97 0.000602110819
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN 0.00078507238
WPIP80849 Wolbachia endosymbiont of Brugia malayi 0.00083314637
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas 0.00105224797
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM4 0.001220911699
PGIN242619 ncbi Porphyromonas gingivalis W83 0.00156347898
WPIP955 Wolbachia pipientis 0.00173005157
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA 0.00179568038
RPRO272947 ncbi Rickettsia prowazekii Madrid E 0.00187295217
RTYP257363 ncbi Rickettsia typhi Wilmington 0.00202575277
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00215858228
NGON242231 ncbi Neisseria gonorrhoeae FA 1090 0.002789212819
GOXY290633 ncbi Gluconobacter oxydans 621H 0.002909412879
STRO369723 ncbi Salinispora tropica CNB-440 0.003076812959
RCON272944 ncbi Rickettsia conorii Malish 7 0.00326095657
NWIN323098 ncbi Nitrobacter winogradskyi Nb-255 0.003861513289
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1 0.003887813299
NMEN122586 ncbi Neisseria meningitidis MC58 0.004104313379
NMEN272831 ncbi Neisseria meningitidis FAM18 0.004216413419
NMEN122587 ncbi Neisseria meningitidis Z2491 0.004630913559
MMAR394221 ncbi Maricaulis maris MCS10 0.005497613819
GBET391165 ncbi Granulibacter bethesdensis CGDNIH1 0.005643013859
RFEL315456 ncbi Rickettsia felis URRWXCal2 0.00581306157
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 23270 0.005944113939
SALA317655 ncbi Sphingopyxis alaskensis RB2256 0.007250414249
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough 0.008536514509
CCHL340177 ncbi Chlorobium chlorochromatii CaD3 0.00864559818
MSP164756 ncbi Mycobacterium sp. MCS 0.009309814649
MSP189918 ncbi Mycobacterium sp. KMS 0.009483414679
HNEP81032 Hyphomonas neptunium 0.009600714699
HHAL349124 ncbi Halorhodospira halophila SL1 0.009719314719


Names of the homologs of the genes in the group in each of these orgs
  EG12715   EG12436   EG11539   EG11411   EG11033   EG10901   EG10861   EG10335   EG10139   
CDIP257309 DIP1500DIP1499DIP1506DIP1534DIP1507DIP1508DIP1515DIP1505DIP1504
MLEP272631 ML1583ML1582ML1591ML1597ML1598ML1611ML1590ML1589
CBLO203907 BFL275BFL278BFL273BFL272BFL271BFL285BFL274BFL277
APHA212042 APH_0440APH_1211APH_0111APH_0397APH_1022APH_0112APH_0113
MTBCDC MT2938MT2937MT2951MT2986MT2957MT2958MT2970MT2949MT2948
MTBRV RV2870CRV2869CRV2883CRV2918CRV2889CRV2890CRV2902CRV2882CRV2881C
MTUB336982 TBFG_12886TBFG_12885TBFG_12897TBFG_12932TBFG_12903TBFG_12904TBFG_12916TBFG_12896TBFG_12895
MTUB419947 MRA_2895MRA_2894MRA_2908MRA_2943MRA_2914MRA_2915MRA_2927MRA_2907MRA_2906
MBOV233413 MB2895CMB2894CMB2907CMB2942CMB2913CMB2914CMB2926CMB2906CMB2905C
CBLO291272 BPEN_283BPEN_286BPEN_281BPEN_280BPEN_279BPEN_293BPEN_282BPEN_285
WPIP80849 WB_0289WB_0090WB_1248WB_1250WB_0979WB_1247WB_1245
ECHA205920 ECH_0557ECH_1070ECH_0266ECH_0514ECH_0946ECH_0267ECH_0269
ZMOB264203 ZMO1150ZMO1149ZMO1154ZMO0766ZMO1155ZMO1156ZMO1004ZMO1153ZMO1151
PGIN242619 PG_1364PG_0383PG_1902PG_0378PG_0377PG_0736PG_1901PG_0046
WPIP955 WD_0992WD_1086WD_0530WD_0532WD_1103WD_0529WD_0526
CVES412965 COSY_0025COSY_0506COSY_0247COSY_0438COSY_0972COSY_0971COSY_0246COSY_0026
RPRO272947 RP161RP155RP087RP086RP202RP154RP424
RTYP257363 RT0151RT0144RT0049RT0050RT0192RT0143RT0410
CRUT413404 RMAG_0025RMAG_0552RMAG_0262RMAG_0475RMAG_1073RMAG_1072RMAG_0261RMAG_0026
NGON242231 NGO1799NGO1800NGO1973NGO0798NGO1974NGO1975NGO1789NGO1796NGO1798
GOXY290633 GOX1816GOX1817GOX1812GOX1872GOX0074GOX0075GOX0345GOX1813GOX1815
STRO369723 STROP_1350STROP_1351STROP_1324STROP_1300STROP_1323STROP_1322STROP_1312STROP_1325STROP_1326
RCON272944 RC0203RC0198RC0113RC0112RC0264RC0197RC0589
NWIN323098 NWI_1853NWI_1852NWI_1857NWI_0133NWI_1858NWI_1859NWI_2598NWI_1856NWI_1854
PSP312153 PNUC_1445PNUC_1444PNUC_1449PNUC_1453PNUC_1450PNUC_1451PNUC_1437PNUC_1448PNUC_1446
NMEN122586 NMB_0184NMB_0183NMB_2103NMB_1203NMB_2102NMB_2101NMB_0192NMB_0187NMB_0185
NMEN272831 NMC0175NMC0174NMC2082NMC1104NMC2081NMC2080NMC0183NMC0178NMC0176
NMEN122587 NMA0083NMA0084NMA0326NMA1374NMA0327NMA0328NMA0075NMA0080NMA0082
MMAR394221 MMAR10_1386MMAR10_1387MMAR10_1382MMAR10_3022MMAR10_1381MMAR10_1380MMAR10_2192MMAR10_1383MMAR10_1385
GBET391165 GBCGDNIH1_0938GBCGDNIH1_0939GBCGDNIH1_0934GBCGDNIH1_0415GBCGDNIH1_1278GBCGDNIH1_1279GBCGDNIH1_1858GBCGDNIH1_0935GBCGDNIH1_0937
RFEL315456 RF_1120RF_1126RF_0070RF_0069RF_1061RF_1127RF_0655
AFER243159 AFE_1634AFE_1633AFE_1638AFE_2122AFE_1639AFE_1640AFE_1624AFE_1637AFE_1635
SALA317655 SALA_1954SALA_1953SALA_1958SALA_2787SALA_1959SALA_1960SALA_0963SALA_1957SALA_1955
DVUL882 DVU_0866DVU_0865DVU_0871DVU_1233DVU_0873DVU_0874DVU_0834DVU_0870DVU_0868
CCHL340177 CAG_0008CAG_0009CAG_1646CAG_1647CAG_1648CAG_1993CAG_0326CAG_1470
MSP164756 MMCS_2042MMCS_2043MMCS_2003MMCS_1958MMCS_1994MMCS_1993MMCS_1972MMCS_2004MMCS_2005
MSP189918 MKMS_2088MKMS_2089MKMS_2049MKMS_2004MKMS_2040MKMS_2039MKMS_2018MKMS_2050MKMS_2051
HNEP81032 HNE_1774HNE_1775HNE_1770HNE_0518HNE_1769HNE_1768HNE_2755HNE_1771HNE_1773
HHAL349124 HHAL_1460HHAL_1459HHAL_1464HHAL_1468HHAL_1465HHAL_1466HHAL_1454HHAL_1463HHAL_1461


Organism features enriched in list (features available for 36 out of the 39 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Meningitis_and_septicemia 0.000574133
Disease:Tuberculosis 0.000574133
Genome_Size_Range9:2-3 0.00965151385
Group:Actinobacteria 0.00019601035
Group:Alphaproteobacteria 0.00052081254
Motility:Yes 0.00032456183
Oxygen_Req:Aerobic 0.004374119137
Oxygen_Req:Facultative 0.00005043156



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-5669 (phosphatidylethanolamine biosynthesis I)2942280.6199
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis)3042320.6157
PWY-5194 (siroheme biosynthesis)2752180.6101
PWY-5340 (sulfate activation for sulfonation)2682140.6049
PWY-4041 (γ-glutamyl cycle)2051790.5935
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)2341950.5921
GLYCOCAT-PWY (glycogen degradation I)1841660.5880
PWY-5278 (sulfite oxidation III)2562050.5787
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide and cobalamin)1511430.5663
P105-PWY (TCA cycle variation I)1711550.5605
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3352390.5586
PWY-5386 (methylglyoxal degradation I)2802140.5529
CYSTSYN-PWY (cysteine biosynthesis I)3522450.5529
COLANSYN-PWY (colanic acid building blocks biosynthesis)2051740.5496
GLUTATHIONESYN-PWY (glutathione biosynthesis)2481970.5447
SO4ASSIM-PWY (sulfate reduction I (assimilatory))2211820.5406
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)2261830.5253
PWY-1269 (CMP-KDO biosynthesis I)2161770.5213
THISYN-PWY (thiamin biosynthesis I)3632460.5212
TYRFUMCAT-PWY (tyrosine degradation I)1331260.5171
PROSYN-PWY (proline biosynthesis I)3432380.5170
HISTSYN-PWY (histidine biosynthesis)3682470.5128
ALKANEMONOX-PWY (two-component alkanesulfonate monooxygenase)1421310.5085
NAGLIPASYN-PWY (lipid-A-precursor biosynthesis)2531950.5044
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1101090.5036
P344-PWY (acrylonitrile degradation)1571400.5033
CYANCAT-PWY (cyanate degradation)2922140.5013
SERSYN-PWY (serine biosynthesis)3552410.4998
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)1571390.4941
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2101700.4895
PWY-3781 (aerobic respiration -- electron donor II)2912120.4875
UBISYN-PWY (ubiquinone-8 biosynthesis (prokaryotic))2852090.4864
FAO-PWY (fatty acid β-oxidation I)3292290.4854
ARO-PWY (chorismate biosynthesis I)3782480.4854
ASPARAGINE-BIOSYNTHESIS (asparagine biosynthesis I)2301800.4801
CITRULLINE-DEG-PWY (citrulline degradation)3552390.4790
PWY-5148 (acyl-CoA hydrolysis)1671430.4741
PANTO-PWY (pantothenate biosynthesis I)3442340.4728
METSYN-PWY (homoserine and methionine biosynthesis)3102190.4704
BIOTIN-SYNTHESIS-PWY (biotin biosynthesis I)3452340.4687
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)2732010.4676
PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY (protocatechuate degradation II (ortho-cleavage pathway))1851530.4669
CHOLINE-BETAINE-ANA-PWY (choline degradation I)101990.4650
MET-SAM-PWY (methionine and methyl-donor-molecule biosynthesis)3052160.4639
P4-PWY (superpathway of lysine, threonine and methionine biosynthesis I)2281770.4634
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)1531330.4618
SER-GLYSYN-PWY (superpathway of serine and glycine biosynthesis I)3472340.4604
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))98960.4556
PWY0-1319 (CDP-diacylglycerol biosynthesis II)1691420.4540
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastid))1581350.4515
REDCITCYC (TCA cycle variation II)1331190.4497
PWY-6164 (3-dehydroquinate biosynthesis I)3682410.4473
GLUTAMINDEG-PWY (glutamine degradation I)1371210.4442
PHOSLIPSYN-PWY (phospholipid biosynthesis I)1661390.4433
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))1671390.4378
HOMOSER-METSYN-PWY (methionine biosynthesis I)3292240.4371
HOMOSERSYN-PWY (homoserine biosynthesis)3762430.4366
PWY-5530 (sorbitol biosynthesis II)92900.4364
PWY-5913 (TCA cycle variation IV)2021590.4328
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)3602360.4269
VALDEG-PWY (valine degradation I)2001570.4253
AST-PWY (arginine degradation II (AST pathway))85840.4251
P381-PWY (adenosylcobalamin biosynthesis II (late cobalt incorporation))2611900.4242
ETF-OXIDIZED (oxidized electron transferring flavoprotein)2421800.4237
DAPLYSINESYN-PWY (lysine biosynthesis I)2571870.4160
PWY-5028 (histidine degradation II)89860.4158
PWY-5673 (nitrate reduction III (dissimilatory))1901500.4143
NONMEVIPP-PWY (methylerythritol phosphate pathway)3512310.4130
RIBOSYN2-PWY (flavin biosynthesis I (bacteria))3882450.4100
FOLSYN-PWY (tetrahydrofolate biosynthesis)3942470.4092
DENITRIFICATION-PWY (nitrate reduction I (denitrification))1881480.4068
PWY0-381 (glycerol degradation I)3342230.4059
ARGSYNBSUB-PWY (arginine biosynthesis II (acetyl cycle))2751950.4054
PWY0-881 (superpathway of fatty acid biosynthesis I (E. coli))2561850.4030
PWY0-862 (fatty acid elongation -- unsaturated)2561850.4030
PWY0-162 (pyrimidine ribonucleotides de novo biosynthesis)3872440.4022
PWY0-823 (arginine degradation III (arginine decarboxylase/agmatinase pathway))104950.4015
PWY-5938 (acetoin biosynthesis I)2902020.4014
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1301120.4008
PWY-5436 (threonine degradation IV)1541270.4005



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12436   EG11539   EG11411   EG11033   EG10901   EG10861   EG10335   EG10139   
EG127150.9999840.9999260.9995620.9998770.9998870.9996980.999950.999965
EG124360.999930.9995050.9998970.9999010.9997050.9999460.999975
EG115390.999640.9999840.9999740.9996540.9999990.999957
EG114110.9996720.999710.9995020.9996230.999538
EG110330.9999990.9996430.9999690.999927
EG109010.9996470.9999630.999922
EG108610.999680.999666
EG103350.99997
EG10139



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PAIRWISE BLAST SCORES:

  EG12715   EG12436   EG11539   EG11411   EG11033   EG10901   EG10861   EG10335   EG10139   
EG127150.0--------
EG12436-0.0-------
EG11539--0.0------
EG11411---0.0-----
EG11033----0.0----
EG10901-----0.0---
EG10861------0.0--
EG10335-------0.0-
EG10139--------0.0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10139 EG10335 EG10861 EG10901 EG11033 EG11411 EG11539 EG12436 EG12715 (centered at EG10335)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG12715   EG12436   EG11539   EG11411   EG11033   EG10901   EG10861   EG10335   EG10139   
326/460375/460383/460202/460390/460383/460383/460385/460349/460
AAEO224324:0:Tyes01098212-21311311089211-
AAVE397945:0:Tyes672125810143-
ABAC204669:0:Tyes1170117101239311309263921169
ABOR393595:0:Tyes8940321657
ACEL351607:0:Tyes0-164017183015-
ACRY349163:2:Tyes19291930192527710591058019261928
ADEH290397:0:Tyes334433438143601693345
AEHR187272:0:Tyes76111512130108
AFER243159:0:Tyes10914495151601311
AHYD196024:0:Tyes8940321657
AMAR234826:0:Tyes4407060--47497-3
AMET293826:0:Tyes106-785852
ANAE240017:0:Tyes0-5-67-43
APHA212042:0:Tyes31210350--27086212
APLE416269:0:Tyes2792854414704394380442286
ASAL382245:3:Tyes87121713140119
ASP1667:2:Tyes32-2-10-34
ASP232721:2:Tyes2872862910292293279290288
ASP62928:0:Tyes87121613140119
ASP62977:0:Tyes1261271227819549550123125
ASP76114:2:Tyes91050431768
AVAR240292:2:Tyes67911110-1444144566111199
BABO262698:1:Tyes-9669700971972258969967
BAFZ390236:2:Fyes----77-076-
BAMB339670:2:Tyes87121613140119
BAMB398577:2:Tno87121613140119
BANT260799:0:Tyes105-671742
BANT261594:0:Tno105-671642
BAPH198804:0:Tyes4-2-10-3-
BAPH224915:0:Tyes--2-10-3-
BAPH372461:0:Tyes--2-10-3-
BAVI360910:0:Tyes8940321657
BBAC264462:0:Tyes-1694169001689168815316911693
BBAC360095:0:Tyes--187-1861850188189
BBRO257310:0:Tyes8940321657
BBUR224326:14:Fno----74750--
BCEN331272:2:Tno87121613140119
BCER226900:0:Tno0-4-561631
BCER288681:0:Tno105-671742
BCER315749:1:Tyes0318323-324325335322320
BCER405917:1:Tyes105-671842
BCLA66692:0:Tyes105-674942
BFRA272559:1:Tyes31733172365-3458345903583075
BFRA295405:0:Tno34573456413-3774377504053345
BGAR290434:2:Fno-74--78790--
BHAL272558:0:Tyes105-675542
BHEN283166:0:Tyes-200197-1961950198199
BJAP224911:0:Fyes396139603965039663967161839643962
BLON206672:0:Tyes0-138932213881387-1390-
BMAL243160:0:Tyes87121613140119
BMAL320388:0:Tno981318141501210
BMEL224914:1:Tno-629991073335
BMEL359391:1:Tno-9349380939940240937935
BOVI236:1:Tyes-8798830884885226882880
BPAR257311:0:Tno8940321657
BPER257313:0:Tyes8940321657
BPSE272560:0:Tyes87121613140119
BPSE320372:1:Tno981318141501210
BPUM315750:0:Tyes4950--44-04648
BQUI283165:0:Tyes-316319-3203210318-
BSP107806:2:Tyes4-2-10-3-
BSP36773:2:Tno87121613140119
BSP376:0:Tyes342534243429034303431140834283426
BSUI204722:1:Tno-9799830984985231982980
BTHA271848:0:Tno8940321657
BTHE226186:0:Tyes10243-1914191314372502503
BTHU281309:1:Tno105-671742
BTHU412694:1:Tno105-671742
BTUR314724:0:Fyes----7475073-
BVIE269482:2:Tyes87121713140119
BWEI315730:3:Tno105-671742
CABO218497:0:Tyes374375--0-564--
CACE272562:1:Tyes323326-2524027-
CAULO:0:Tyes19271926193101932193336819301928
CBEI290402:0:Tyes13148-760911
CBLO203907:0:Tyes472-101436
CBLO291272:0:Tno472-101436
CBOT36826:0:Tno109-11121886
CBOT441770:0:Tyes108-9101675
CBOT441771:0:Tno108-10111775
CBOT441772:1:Tno108-9101675
CBOT498213:1:Tno108-9101675
CBUR227377:0:Tyes-3745-464704442
CBUR360115:0:Tno-4150-515204947
CBUR434922:0:Tno-8172-1078235
CCAV227941:1:Tyes393394--0-603--
CCHL340177:0:Tyes011652-1653165419983211472
CDIF272563:1:Tyes898897906-9079080905-
CDIP257309:0:Tyes10733891665
CEFF196164:0:Fyes0-6619102054
CFEL264202:1:Tyes218217--624-0--
CHUT269798:0:Tyes25912590216-2631263224272170
CHYD246194:0:Tyes340339347-3483490346342
CJEI306537:0:Tyes0-6-781554
CJEJ192222:0:Tyes10988191025-931932-01099
CJEJ195099:0:Tno12138921089-995996-01214
CKLU431943:1:Tyes141510-9801113
CMUR243161:0:Tyes287288--0-243--
CNOV386415:0:Tyes105-67644-
CPEL335992:0:Tyes807712---8020804-
CPER195102:0:Tyes105-671342
CPER195103:0:Tno105-671342
CPER289380:1:Tyes105-671342
CPHY357809:0:Tyes222221--2792800225-
CPNE115711:1:Tno364365--0-597--
CPNE115713:0:Tyes226225--585-0--
CPNE138677:0:Tno232231--594-0--
CPNE182082:0:Tno239238--620-0--
CPRO264201:0:Fyes1241251780-0-534--
CPSY167879:0:Tyes101160542079
CRUT413404:0:Tyes0496225423989988-2241
CSAL290398:0:Tyes8940321657
CTEP194439:0:Tyes101630-1631163221071431108
CTET212717:0:Tyes13148-760911
CVES412965:0:Tyes0461213393907906-2121
CVIO243365:0:Tyes672726101435
DARO159087:0:Tyes91050431768
DDES207559:0:Tyes2928351235-3903431
DETH243164:0:Tyes105--739642
DGEO319795:1:Tyes104-5-57632
DHAF138119:0:Tyes106-785153
DPSY177439:2:Tyes2402412360-2341927237239
DRAD243230:0:Tyes0-3-4-42821
DSP216389:0:Tyes105--736542
DSP255470:0:Tno105--738742
DVUL882:0:Tyes323137397394003634
ECAN269484:0:Tyes302694591--3470590-
ECAR218491:0:Tyes71050431769
ECHA205920:0:Tno2827680--24264813
ECOL199310:0:Tno-950421668
ECOL316407:0:Tno71050431769
ECOL362663:0:Tno6940321658
ECOL364106:1:Tyes71050421769
ECOL405955:2:Tyes6940-21658
ECOL439855:1:Tno71050421769
ECOL83334:0:Tno6940321658
ECOLI:0:Tno71050431769
ECOO157:0:Tno6940321658
ELIT314225:0:Tyes31431531019403073060311-
ERUM302409:0:Tyes333721607--3720-605
ESP42895:1:Tyes6940321658
FALN326424:0:Tyes47614760-0-4767477447654764
FJOH376686:0:Tyes-5890-10431044136712053
FNUC190304:0:Tyes183318312-1018803-
FRANT:0:Fno1179-2-1088935
FSUC59374:0:Tyes943947934--0-937-
FTUL351581:0:Tno281-2-1084235
FTUL393011:0:Tno264-2-1077635
FTUL393115:0:Tyes1158-2-1088135
FTUL401614:0:Tyes1244-2-10105735
GBET391165:0:Tyes52352451908638641443520522
GKAU235909:1:Tyes505146-454404749
GMET269799:1:Tyes6721811016243-
GOXY290633:3:Tyes17281729172417840126817251727
GSUL243231:0:Tyes125912581263116512641265012621260
GTHE420246:1:Tyes495045-444304648
GVIO251221:0:Tyes198613722076--1560123401118
HACI382638:1:Tyes11711035379-5556-0-
HARS204773:0:Fyes8940321657
HCHE349521:0:Tyes981317141501210
HDUC233412:0:Tyes134140479-4814820478141
HHAL349124:0:Tyes6510141112097
HHEP235279:0:Tyes851263399-649650-0-
HINF281310:0:Tyes010222292898972171103
HINF71421:0:Tno01102528941061052471111
HNEP81032:0:Tyes123612371232012311230219312331235
HPY:0:Tno145566-13571356-10600
HPYL357544:1:Tyes146552-13171316-10120
HPYL85963:0:Tno039504-12291230-966-
HSOM205914:1:Tyes1571531590262261530158154
ILOI283942:0:Tyes10596784942
JSP290400:1:Tyes20802079208550919291930020832081
JSP375286:0:Tyes87121613140119
KPNE272620:2:Tyes6940321758
LACI272621:0:Tyes-265269-2702710-266
LBRE387344:2:Tyes-519524-5255260-520
LCAS321967:1:Tyes-180184-1851860183181
LDEL321956:0:Tyes-5660-616205957
LDEL390333:0:Tyes-5660-616205957
LINN272626:1:Tno424338-45445503941
LINT189518:1:Tyes105640-7-42
LINT363253:2:Tyes164165160--1550161-
LJOH257314:0:Tyes-336340-3413420339337
LLAC272623:0:Tyes-835717-8598600716-
LMES203120:1:Tyes-1510-511512785090
LMON169963:0:Tno444540-38438504143
LMON265669:0:Tyes434439-38638704042
LPLA220668:0:Tyes-170174-1751760173171
LPNE272624:0:Tno-1120612141207120886712050
LPNE297245:1:Fno-1111611291117111877811150
LPNE297246:1:Fyes-1110511131106110775911040
LPNE400673:0:Tno-200734535734634703442008
LREU557436:0:Tyes-82-109237
LSAK314315:0:Tyes-267272-2732740271268
LWEL386043:0:Tno424338-38438503941
LXYL281090:0:Tyes0---2524---
MAQU351348:2:Tyes87121613140119
MART243272:0:Tyes----0----
MAVI243243:0:Tyes0--461617305-
MBOV233413:0:Tno1013481920321211
MBOV410289:0:Tno101348192032-11
MCAP243233:0:Tyes894032177557
MCAP340047:0:Tyes----10158--
MFLA265072:0:Tyes87121613140119
MFLO265311:0:Tyes----293-270-0
MGEN243273:0:Tyes----0----
MGIL350054:2:Tyes104210050518541-
MHYO262719:0:Tyes----0----
MHYO262722:0:Tno----0----
MHYO295358:0:Tno----0----
MLEP272631:0:Tyes105-781743
MLOT266835:2:Tyes-04363889537131
MMAG342108:0:Tyes105198567149842
MMAR394221:0:Tyes67216311081235
MMOB267748:0:Tyes----0----
MMYC272632:0:Tyes----181-0--
MPEN272633:0:Tyes0---832----
MPET420662:0:Tyes------0--
MPET420662:1:Tyes2142132180219220-217215
MPNE272634:0:Tyes----0----
MPUL272635:0:Tyes----0----
MSME246196:0:Tyes1511521130939215114-
MSP164756:1:Tyes83844503635144647
MSP189918:1:Tno83844503635144647
MSP400668:0:Tyes8940321657
MSYN262723:0:Tyes----0----
MTBCDC:0:Tno1014502021341211
MTBRV:0:Tno1014492021331312
MTHE264732:0:Tyes646557--5505862
MTUB336982:0:Tno1012471819311110
MTUB419947:0:Tyes1015502122341413
MVAN350058:0:Tyes798039029281440-
MXAN246197:0:Tyes-12688-268926901826870
NEUR228410:0:Tyes549-1011086
NFAR247156:2:Tyes1010431112269-
NGON242231:0:Tyes9059061070010711072896902904
NHAM323097:2:Tyes141014111406014051404287614071409
NMEN122586:0:Tno10184898418471846942
NMEN122587:0:Tyes9102491251250251068
NMEN272831:0:Tno10169984216981697942
NMUL323848:2:Tyes6721956101135
NSEN222891:0:Tyes0267482--484249--
NSP103690:4:Tyes317827900-36223623315912694
NSP35761:1:Tyes0-37633839493635
NWIN323098:0:Tyes174317421747017481749249517461744
OCAR504832:0:Tyes183418351830018291828284218311833
OIHE221109:0:Tyes-5248-474604951
OTSU357244:0:Fyes-0----243--
PACN267747:0:Tyes75-84-858608382
PAER208963:0:Tyes8940321657
PAER208964:0:Tno87121613140119
PARC259536:0:Tyes1182118111864810-11851183
PAST100379:0:Tyes--2-10---
PATL342610:0:Tyes8940321657
PCAR338963:0:Tyes4094084130414415712412410
PCRY335284:1:Tyes1315131413195210111213181316
PDIS435591:0:Tyes012876-29942993304928811363
PENT384676:0:Tyes87121613140119
PFLU205922:0:Tyes8940321657
PFLU220664:0:Tyes8940321657
PGIN242619:0:Tyes11502961619-29229161316180
PHAL326442:1:Tyes14131822192001715
PINT246198:1:Tyes1041052033--123269110
PLUM243265:0:Fyes6940321658
PLUT319225:0:Tyes6463390--38803331739
PMAR146891:0:Tyes7518161-243--0-
PMAR167539:0:Tyes7247931-31030911550-
PMAR167540:0:Tyes6306781-2352349980-
PMAR167555:0:Tyes101810911---13780922
PMAR59920:0:Tno881461219---41312180
PMAR74546:0:Tno7257781-242--0580
PMAR74547:0:Tyes585801668-0-1233669-
PMEN399739:0:Tyes87121613140119
PNAP365044:2:Tyes67261101435
PPEN278197:0:Tyes-62-109135
PPRO298386:2:Tyes87121613140119
PPUT160488:0:Tyes8940321657
PPUT351746:0:Tno87121613140119
PRUM264731:0:Tyes281128101799-252525242268-0
PSP117:0:Tyes1528152953104306--5324652
PSP296591:2:Tyes101100105010610793104102
PSP312153:0:Tyes87121613140119
PSTU379731:0:Tyes8940321657
PSYR205918:0:Tyes8940321657
PSYR223283:1:Tno8940321657
PTHE370438:0:Tyes892-1046236
RBEL336407:0:Tyes-624637-7937920638-
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