CANDIDATE ID: 26

CANDIDATE ID: 26

NUMBER OF GENES: 17
AVERAGE SCORE:    9.9932751e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7665 (lptA) (b3200)
   Products of gene:
     - YHBN-MONOMER (LptA)
     - ABC-53-CPLX (LptABCFG ABC transporter)

- G7664 (lptC) (b3199)
   Products of gene:
     - G7664-MONOMER (LptC)
     - ABC-53-CPLX (LptABCFG ABC transporter)

- G7663 (kdsC) (b3198)
   Products of gene:
     - G7663-MONOMER (3-deoxy-D-manno-octulosonate 8-phosphate phosphatase monomer)
     - KDO-8PPHOSPHAT-CPLX (3-deoxy-D-manno-octulosonate 8-phosphate phosphatase)
       Reactions:
        3-deoxy-D-manno-octulosonate 8-P + H2O  ->  3-deoxy-D-manno-octulosonate + phosphate
         In pathways
         LPSSYN-PWY (superpathway of lipopolysaccharide biosynthesis)
         KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)
         PWY-5111 (PWY-5111)
         PWY-1269 (CMP-KDO biosynthesis I)

- G7662 (kdsD) (b3197)
   Products of gene:
     - G7662-MONOMER (D-arabinose 5-phosphate isomerase)
     - CPLX0-1262 (D-arabinose 5-phosphate isomerase)
       Reactions:
        D-arabinose 5-phosphate  =  D-ribulose-5-phosphate
         In pathways
         LPSSYN-PWY (superpathway of lipopolysaccharide biosynthesis)
         KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)
         PWY-1269 (CMP-KDO biosynthesis I)

- G7659 (mlaC) (b3192)
   Products of gene:
     - G7659-MONOMER (MlaC)
     - ABC-45-CPLX (phospholipid ABC transporter)

- G7657 (yrbA) (b3190)
   Products of gene:
     - G7657-MONOMER (predicted DNA-binding transcriptional regulator)

- EG12802 (yrbG) (b3196)
   Products of gene:
     - YRBG-MONOMER (YrbG CaCA transporter)
       Reactions:
        Na+[periplasmic space] + Ca2+[cytosol]  ->  Na+[cytosol] + Ca2+[periplasmic space]

- EG12801 (mlaF) (b3195)
   Products of gene:
     - YRBF-MONOMER (MlaF)
     - ABC-45-CPLX (phospholipid ABC transporter)

- EG12800 (mlaE) (b3194)
   Products of gene:
     - YRBE-MONOMER (MlaE)
     - ABC-45-CPLX (phospholipid ABC transporter)

- EG12799 (mlaD) (b3193)
   Products of gene:
     - EG12799-MONOMER (MlaD)
     - ABC-45-CPLX (phospholipid ABC transporter)

- EG12147 (npr) (b3206)
   Products of gene:
     - EG12147-MONOMER (phosphocarrier protein HPr-like NPr, nitrogen related, exchanges phosphate with Enzyme I, Hpr)

- EG12146 (yhbJ) (b3205)
   Products of gene:
     - EG12146-MONOMER (predicted P-loop containing ATPase)

- EG11682 (ptsN) (b3204)
   Products of gene:
     - EG11682-MONOMER (phosphotransferase system enzyme IIA, regulates N metabolism)

- EG11681 (hpf) (b3203)
   Products of gene:
     - EG11681-MONOMER (predicted ribosome-associated, sigma 54 modulation protein)

- EG11680 (lptB) (b3201)
   Products of gene:
     - YHBG-MONOMER (LptB)
     - ABC-53-CPLX (LptABCFG ABC transporter)

- EG11358 (murA) (b3189)
   Products of gene:
     - UDPNACETYLGLUCOSAMENOLPYRTRANS-MONOMER (UDP-N-acetylglucosamine enolpyruvoyl transferase)
       Reactions:
        UDP-alpha-N-acetyl-D-glucosamine + phosphoenolpyruvate  =  UDP-N-acetylglucosamine-enolpyruvate + phosphate
         In pathways
         PWY-6470 (PWY-6470)
         PWY-6471 (PWY-6471)
         PWY-5265 (PWY-5265)
         PWY-6385 (PWY-6385)
         PEPTIDOGLYCANSYN-PWY (peptidoglycan biosynthesis I (meso-diaminopimelate containing))
         PWY-6386 (PWY-6386)
         PWY-6387 (UDP-N-acetylmuramoyl-pentapeptide biosynthesis III (meso-DAP-containing))

- EG10898 (rpoN) (b3202)
   Products of gene:
     - RPON-MONOMER (RNA polymerase, sigma 54 (sigma N) factor)
     - RNAP54-CPLX (RNA polymerase sigma 54)



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ORGANISMS CONTAINING AT LEAST 15 GENES FROM THE GROUP:

Total number of orgs: 125
Effective number of orgs (counting one per cluster within 468 clusters): 79

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175817
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295317
YPES386656 ncbi Yersinia pestis Pestoides F17
YPES377628 ncbi Yersinia pestis Nepal51617
YPES360102 ncbi Yersinia pestis Antiqua17
YPES349746 ncbi Yersinia pestis Angola17
YPES214092 ncbi Yersinia pestis CO9217
YPES187410 ncbi Yersinia pestis KIM 1017
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808117
VVUL216895 ncbi Vibrio vulnificus CMCP617
VVUL196600 ncbi Vibrio vulnificus YJ01617
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 221063316
VFIS312309 ncbi Vibrio fischeri ES11417
VEIS391735 ncbi Verminephrobacter eiseniae EF01-215
VCHO345073 ncbi Vibrio cholerae O39517
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N1696117
TDEN292415 ncbi Thiobacillus denitrificans ATCC 2525916
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT217
SSP94122 ncbi Shewanella sp. ANA-317
SSON300269 ncbi Shigella sonnei Ss04617
SSED425104 ncbi Shewanella sediminis HAW-EB317
SPRO399741 ncbi Serratia proteamaculans 56817
SPEA398579 ncbi Shewanella pealeana ATCC 70034516
SONE211586 ncbi Shewanella oneidensis MR-117
SLOI323850 ncbi Shewanella loihica PV-417
SHIGELLA ncbi Shigella flexneri 2a str. 2457T17
SHAL458817 ncbi Shewanella halifaxensis HAW-EB417
SGLO343509 ncbi Sodalis glossinidius morsitans16
SFLE373384 ncbi Shigella flexneri 5 str. 840117
SFLE198214 ncbi Shigella flexneri 2a str. 30117
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47617
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6717
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 915017
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1817
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty217
SDYS300267 ncbi Shigella dysenteriae Sd19717
SDEN318161 ncbi Shewanella denitrificans OS21717
SBOY300268 ncbi Shigella boydii Sb22717
SBAL402882 ncbi Shewanella baltica OS18517
SBAL399599 ncbi Shewanella baltica OS19517
RSOL267608 ncbi Ralstonia solanacearum GMI100015
RFER338969 ncbi Rhodoferax ferrireducens T11815
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC300016
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a16
PSTU379731 ncbi Pseudomonas stutzeri A150115
PSP296591 ncbi Polaromonas sp. JS66615
PPUT76869 ncbi Pseudomonas putida GB-117
PPUT351746 ncbi Pseudomonas putida F117
PPUT160488 ncbi Pseudomonas putida KT244017
PPRO298386 ncbi Photobacterium profundum SS917
PNAP365044 ncbi Polaromonas naphthalenivorans CJ216
PMUL272843 ncbi Pasteurella multocida multocida Pm7015
PMEN399739 ncbi Pseudomonas mendocina ymp15
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO117
PING357804 ncbi Psychromonas ingrahamii 3717
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC12517
PFLU220664 ncbi Pseudomonas fluorescens Pf-515
PFLU216595 ncbi Pseudomonas fluorescens SBW2516
PFLU205922 ncbi Pseudomonas fluorescens Pf0-116
PENT384676 ncbi Pseudomonas entomophila L4816
PCAR338963 ncbi Pelobacter carbinolicus DSM 238015
PATL342610 ncbi Pseudoalteromonas atlantica T6c17
PAER208964 ncbi Pseudomonas aeruginosa PAO115
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA1415
NOCE323261 ncbi Nitrosococcus oceani ATCC 1970715
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E16
MPET420662 ncbi Methylibium petroleiphilum PM116
MAQU351348 ncbi Marinobacter aquaeolei VT816
LCHO395495 ncbi Leptothrix cholodnii SP-616
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857817
JSP375286 ncbi Janthinobacterium sp. Marseille15
ILOI283942 ncbi Idiomarina loihiensis L2TR17
HSOM228400 ncbi Haemophilus somnus 233615
HSOM205914 ncbi Haemophilus somnus 129PT15
HHAL349124 ncbi Halorhodospira halophila SL116
HCHE349521 ncbi Hahella chejuensis KCTC 239615
HARS204773 ncbi Herminiimonas arsenicoxydans15
ESP42895 Enterobacter sp.17
EFER585054 ncbi Escherichia fergusonii ATCC 3546917
ECOO157 ncbi Escherichia coli O157:H7 EDL93317
ECOL83334 Escherichia coli O157:H717
ECOL585397 ncbi Escherichia coli ED1a17
ECOL585057 ncbi Escherichia coli IAI3917
ECOL585056 ncbi Escherichia coli UMN02617
ECOL585055 ncbi Escherichia coli 5598917
ECOL585035 ncbi Escherichia coli S8817
ECOL585034 ncbi Escherichia coli IAI117
ECOL481805 ncbi Escherichia coli ATCC 873917
ECOL469008 ncbi Escherichia coli BL21(DE3)17
ECOL439855 ncbi Escherichia coli SMS-3-517
ECOL413997 ncbi Escherichia coli B str. REL60617
ECOL409438 ncbi Escherichia coli SE1117
ECOL405955 ncbi Escherichia coli APEC O117
ECOL364106 ncbi Escherichia coli UTI8917
ECOL362663 ncbi Escherichia coli 53617
ECOL331111 ncbi Escherichia coli E24377A17
ECOL316407 ncbi Escherichia coli K-12 substr. W311017
ECOL199310 ncbi Escherichia coli CFT07317
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104317
DARO159087 ncbi Dechloromonas aromatica RCB15
CVIO243365 ncbi Chromobacterium violaceum ATCC 1247216
CSAL290398 ncbi Chromohalobacter salexigens DSM 304316
CPSY167879 ncbi Colwellia psychrerythraea 34H17
BVIE269482 ncbi Burkholderia vietnamiensis G416
BTHA271848 ncbi Burkholderia thailandensis E26415
BSP36773 Burkholderia sp.16
BPSE320372 ncbi Burkholderia pseudomallei 1710b15
BPSE272560 ncbi Burkholderia pseudomallei K9624315
BPET94624 Bordetella petrii15
BMAL320389 ncbi Burkholderia mallei NCTC 1024715
BMAL320388 ncbi Burkholderia mallei SAVP115
BMAL243160 ncbi Burkholderia mallei ATCC 2334415
BCEN331272 ncbi Burkholderia cenocepacia HI242416
BCEN331271 ncbi Burkholderia cenocepacia AU 105416
BBRO257310 ncbi Bordetella bronchiseptica RB5015
BAMB398577 ncbi Burkholderia ambifaria MC40-616
BAMB339670 ncbi Burkholderia ambifaria AMMD16
ASP76114 ncbi Aromatoleum aromaticum EbN115
ASP62928 ncbi Azoarcus sp. BH7215
ASAL382245 ncbi Aeromonas salmonicida salmonicida A44917
AHYD196024 Aeromonas hydrophila dhakensis17
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 2327016
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-116
ABAU360910 ncbi Bordetella avium 197N15
AAVE397945 ncbi Acidovorax citrulli AAC00-115


Names of the homologs of the genes in the group in each of these orgs
  G7665   G7664   G7663   G7662   G7659   G7657   EG12802   EG12801   EG12800   EG12799   EG12147   EG12146   EG11682   EG11681   EG11680   EG11358   EG10898   
YPSE349747 YPSIP31758_0443YPSIP31758_0444YPSIP31758_0445YPSIP31758_0446YPSIP31758_0451YPSIP31758_0453YPSIP31758_0447YPSIP31758_0448YPSIP31758_0449YPSIP31758_0450YPSIP31758_0437YPSIP31758_0438YPSIP31758_0439YPSIP31758_0440YPSIP31758_0442YPSIP31758_0454YPSIP31758_0441
YPSE273123 YPTB3524YPTB3523YPTB3522YPTB3521YPTB3516YPTB3514YPTB3520YPTB3519YPTB3518YPTB3517YPTB3530YPTB3529YPTB3528YPTB3527YPTB3525YPTB3513YPTB3526
YPES386656 YPDSF_0317YPDSF_0318YPDSF_0319YPDSF_0320YPDSF_0325YPDSF_0327YPDSF_0321YPDSF_0322YPDSF_0323YPDSF_0324YPDSF_0310YPDSF_0311YPDSF_0312YPDSF_0313YPDSF_0316YPDSF_0328YPDSF_0315
YPES377628 YPN_3462YPN_3461YPN_3460YPN_3459YPN_3454YPN_3452YPN_3458YPN_3457YPN_3456YPN_3455YPN_3469YPN_3468YPN_3467YPN_3466YPN_3463YPN_3451YPN_3464
YPES360102 YPA_3723YPA_3724YPA_3725YPA_3726YPA_3731YPA_3733YPA_3727YPA_3728YPA_3729YPA_3730YPA_3716YPA_3717YPA_3718YPA_3719YPA_3722YPA_3734YPA_3721
YPES349746 YPANGOLA_A1151YPANGOLA_A1150YPANGOLA_A1149YPANGOLA_A1148YPANGOLA_A1143YPANGOLA_A1141YPANGOLA_A1147YPANGOLA_A1146YPANGOLA_A1145YPANGOLA_A1144YPANGOLA_A1157YPANGOLA_A1156YPANGOLA_A1155YPANGOLA_A1154YPANGOLA_A1152YPANGOLA_A1140YPANGOLA_A1153
YPES214092 YPO3580YPO3579YPO3578YPO3577YPO3572YPO3570YPO3576YPO3575YPO3574YPO3573YPO3587YPO3586YPO3585YPO3279YPO3581YPO3569YPO3582
YPES187410 Y0152Y0151Y0150Y0149Y0143Y0141Y0147Y0146Y0145Y0144Y0159Y0158Y0157Y0156Y0153Y0140Y0154
YENT393305 YE3757YE3756YE3755YE3754YE3749YE3747YE3753YE3752YE3751YE3750YE3763YE3762YE3761YE3760YE3758YE3746YE3759
VVUL216895 VV1_0690VV1_0689VV1_0688VV1_0687VV1_0682VV1_0680VV1_0686VV1_0685VV1_0684VV1_0683VV1_0697VV1_0695VV1_0694VV1_0693VV1_0691VV1_0679VV1_0692
VVUL196600 VV0450VV0451VV0452VV0453VV0458VV0460VV0454VV0455VV0456VV0457VV0444VV0445VV0446VV0447VV0449VV0461VV0448
VPAR223926 VP2668VP2667VP2666VP2661VP2659VP2665VP2664VP2663VP2662VP2674VP2673VP2672VP2671VP2669VP2658VP2670
VFIS312309 VF0389VF0390VF0391VF0392VF0397VF0400VF0393VF0394VF0395VF0396VF0383VF0384VF0385VF0386VF0388VF0401VF0387
VEIS391735 VEIS_0576VEIS_0153VEIS_0154VEIS_2401VEIS_4454VEIS_2397VEIS_2398VEIS_2399VEIS_1281VEIS_1053VEIS_0601VEIS_0600VEIS_0577VEIS_4453VEIS_0578
VCHO345073 VC0395_A2107VC0395_A2106VC0395_A2105VC0395_A2104VC0395_A2099VC0395_A2097VC0395_A2103VC0395_A2102VC0395_A2101VC0395_A2100VC0395_A2113VC0395_A2112VC0395_A2111VC0395_A2110VC0395_A2108VC0395_A2096VC0395_A2109
VCHO VC2527VC2525VC2524VC2523VC2517VC2515VC2522VC2520VC2519VC2518VC2533VC2532VC2531VC2530VC2528VC2514VC2529
TDEN292415 TBD_0535TBD_0537TBD_0538TBD_1896TBD_1892TBD_2520TBD_1900TBD_1899TBD_1898TBD_2413TBD_0529TBD_0531TBD_0532TBD_0534TBD_1891TBD_0533
STYP99287 STM3318STM3317STM3316STM3315STM3310STM3308STM3314STM3313STM3312STM3311STM3324STM3323STM3322STM3321STM3319STM3307STM3320
SSP94122 SHEWANA3_0674SHEWANA3_0675SHEWANA3_0676SHEWANA3_0677SHEWANA3_0681SHEWANA3_0683SHEWANA3_3815SHEWANA3_0678SHEWANA3_0679SHEWANA3_0680SHEWANA3_0668SHEWANA3_0669SHEWANA3_0670SHEWANA3_0671SHEWANA3_0673SHEWANA3_0684SHEWANA3_0672
SSON300269 SSO_3348SSO_3347SSO_3346SSO_3345SSO_3340SSO_3338SSO_3344SSO_3343SSO_3342SSO_3341SSO_3354SSO_3353SSO_3352SSO_3351SSO_3349SSO_3337SSO_3350
SSED425104 SSED_0728SSED_0729SSED_0730SSED_0731SSED_0736SSED_0738SSED_0732SSED_0733SSED_0734SSED_0735SSED_0722SSED_0723SSED_0724SSED_0725SSED_0727SSED_0739SSED_0726
SPRO399741 SPRO_4365SPRO_4364SPRO_4363SPRO_4362SPRO_4357SPRO_4355SPRO_4361SPRO_4360SPRO_4359SPRO_4358SPRO_4371SPRO_4370SPRO_4369SPRO_4368SPRO_4366SPRO_4354SPRO_4367
SPEA398579 SPEA_3614SPEA_3613SPEA_3612SPEA_3611SPEA_3606SPEA_3604SPEA_3610SPEA_3609SPEA_3608SPEA_3607SPEA_3621SPEA_3618SPEA_3617SPEA_3615SPEA_3603SPEA_3616
SONE211586 SO_3959SO_3958SO_3957SO_3956SO_3951SO_3949SO_0354SO_3954SO_3953SO_3952SO_3965SO_3964SO_3963SO_3962SO_3960SO_3948SO_3961
SLOI323850 SHEW_3309SHEW_3308SHEW_3307SHEW_3306SHEW_3301SHEW_3299SHEW_3305SHEW_3304SHEW_3303SHEW_3302SHEW_3315SHEW_3314SHEW_3313SHEW_3312SHEW_3310SHEW_3298SHEW_3311
SHIGELLA YHBNYRBKYRBIYRBHYRBCYRBAYRBGVPSAVPSBVPSCPTSOYHBJPTSNYHBHYHBGMURARPON
SHAL458817 SHAL_3703SHAL_3702SHAL_3701SHAL_3700SHAL_3695SHAL_3693SHAL_3699SHAL_3698SHAL_3697SHAL_3696SHAL_3709SHAL_3708SHAL_3707SHAL_3706SHAL_3704SHAL_3692SHAL_3705
SGLO343509 SG0201SG0202SG0203SG0204SG0208SG0210SG0205SG0206SG0207SG0195SG0196SG0197SG0198SG0200SG0211SG0199
SFLE373384 SFV_3230SFV_3229SFV_3228SFV_3227SFV_3222SFV_3220SFV_3226SFV_3225SFV_3224SFV_3223SFV_3236SFV_3235SFV_3234SFV_3233SFV_3231SFV_3219SFV_3232
SFLE198214 AAN44706.1AAN44705.1AAN44704.1AAN44703.1AAN44698.1AAN44696.1AAN44702.1AAN44701.1AAN44700.1AAN44699.1AAN44712.1AAN44711.1AAN44710.1AAN44709.1AAN44707.1AAN44695.1AAN44708.1
SENT454169 SEHA_C3615SEHA_C3614SEHA_C3613SEHA_C3612SEHA_C3607SEHA_C3605SEHA_C3611SEHA_C3610SEHA_C3609SEHA_C3608SEHA_C3621SEHA_C3620SEHA_C3619SEHA_C3618SEHA_C3616SEHA_C3604SEHA_C3617
SENT321314 SCH_3256SCH_3255SCH_3254SCH_3253SCH_3248SCH_3246SCH_3252SCH_3251SCH_3250SCH_3249SCH_3262SCH_3261SCH_3260SCH_3259SCH_3257SCH_3245SCH_3258
SENT295319 SPA3185SPA3184SPA3183SPA3182SPA3177SPA3175SPA3181SPA3180SPA3179SPA3178SPA3191SPA3190SPA3189SPA3188SPA3186SPA3174SPA3187
SENT220341 STY3497STY3496STY3495STY3494STY3489STY3487STY3493STY3492STY3491STY3490STY3503STY3502STY3501STY3500STY3498STY3486STY3499
SENT209261 T3235T3234T3233T3232T3227T3225T3231T3230T3229T3228T3241T3240T3239T3238T3236T3224T3237
SDYS300267 SDY_3381SDY_3380SDY_3379SDY_3378SDY_3373SDY_3371SDY_3377SDY_3376SDY_3375SDY_3374SDY_3387SDY_3386SDY_3385SDY_3384SDY_3382SDY_3370SDY_3383
SDEN318161 SDEN_0491SDEN_0492SDEN_0493SDEN_0494SDEN_0499SDEN_0501SDEN_0495SDEN_0496SDEN_0497SDEN_0498SDEN_0485SDEN_0486SDEN_0487SDEN_0488SDEN_0490SDEN_0502SDEN_0489
SBOY300268 SBO_3182SBO_3183SBO_3184SBO_3185SBO_3190SBO_3192SBO_3186SBO_3187SBO_3188SBO_3189SBO_3176SBO_3177SBO_3178SBO_2635SBO_3181SBO_3193SBO_3180
SBAL402882 SHEW185_0688SHEW185_0689SHEW185_0690SHEW185_0691SHEW185_0695SHEW185_0697SHEW185_0348SHEW185_0692SHEW185_0693SHEW185_0694SHEW185_0682SHEW185_0683SHEW185_0684SHEW185_0685SHEW185_0687SHEW185_0698SHEW185_0686
SBAL399599 SBAL195_0718SBAL195_0719SBAL195_0720SBAL195_0721SBAL195_0725SBAL195_0727SBAL195_0355SBAL195_0722SBAL195_0723SBAL195_0724SBAL195_0712SBAL195_0713SBAL195_0714SBAL195_0715SBAL195_0717SBAL195_0728SBAL195_0716
RSOL267608 RSC0410RSC0412RSC0413RSC2958RSC2954RSC2962RSC2961RSC2960RSC0347RSC0403RSC0406RSC0407RSC0409RSC2953RSC0408
RFER338969 RFER_4236RFER_4237RFER_2063RFER_2943RFER_1133RFER_2935RFER_2936RFER_2937RFER_0602RFER_1653RFER_0751RFER_0750RFER_0777RFER_2944RFER_0778
PSYR223283 PSPTO_4451PSPTO_4449PSPTO_4448PSPTO_4444PSPTO_4442PSPTO_4477PSPTO_4447PSPTO_4446PSPTO_4445PSPTO_4457PSPTO_4456PSPTO_4455PSPTO_4454PSPTO_4452PSPTO_4441PSPTO_4453
PSYR205918 PSYR_4145PSYR_4143PSYR_4142PSYR_4138PSYR_4136PSYR_4168PSYR_4141PSYR_4140PSYR_4139PSYR_4151PSYR_4150PSYR_4149PSYR_4148PSYR_4146PSYR_4135PSYR_4147
PSTU379731 PST_1033PST_1035PST_1036PST_1043PST_1009PST_1037PST_1038PST_1039PST_1027PST_1028PST_1029PST_1030PST_1032PST_1044PST_1031
PSP296591 BPRO_4487BPRO_4897BPRO_4898BPRO_0797BPRO_0801BPRO_0793BPRO_0794BPRO_0795BPRO_0298BPRO_1300BPRO_4612BPRO_4613BPRO_4486BPRO_0802BPRO_4485
PPUT76869 PPUTGB1_0961PPUTGB1_0962PPUTGB1_0963PPUTGB1_0964PPUTGB1_0968PPUTGB1_0970PPUTGB1_0935PPUTGB1_0965PPUTGB1_0966PPUTGB1_0967PPUTGB1_0955PPUTGB1_0956PPUTGB1_0957PPUTGB1_0958PPUTGB1_0960PPUTGB1_0971PPUTGB1_0959
PPUT351746 PPUT_0993PPUT_0994PPUT_0995PPUT_0996PPUT_1000PPUT_1002PPUT_0968PPUT_0997PPUT_0998PPUT_0999PPUT_0987PPUT_0988PPUT_0989PPUT_0990PPUT_0992PPUT_1003PPUT_0991
PPUT160488 PP_0954PP_0955PP_0956PP_0957PP_0961PP_0963PP_0928PP_0958PP_0959PP_0960PP_0948PP_0949PP_0950PP_0951PP_0953PP_0964PP_0952
PPRO298386 PBPRA3253PBPRA3252PBPRA3251PBPRA3250PBPRA3245PBPRA3243PBPRA3249PBPRA3248PBPRA3247PBPRA3246PBPRA3259PBPRA3258PBPRA3257PBPRA3256PBPRA3254PBPRA3242PBPRA3255
PNAP365044 PNAP_3708PNAP_4107PNAP_4108PNAP_0689PNAP_0693PNAP_2983PNAP_0685PNAP_0686PNAP_0687PNAP_0238PNAP_0906PNAP_3793PNAP_3794PNAP_3709PNAP_0694PNAP_3710
PMUL272843 PM0172PM0173PM0524PM0525PM0177PM0179PM0428PM0174PM0175PM0176PM0169PM0170PM0092PM0171PM0180
PMEN399739 PMEN_0872PMEN_0874PMEN_0875PMEN_0881PMEN_0851PMEN_0876PMEN_0877PMEN_0878PMEN_0866PMEN_0867PMEN_0868PMEN_0869PMEN_0871PMEN_0882PMEN_0870
PLUM243265 PLU4039PLU4038PLU4037PLU4036PLU4031PLU4029PLU4035PLU4034PLU4033PLU4032PLU4045PLU4044PLU4043PLU4042PLU4040PLU4028PLU4041
PING357804 PING_2890PING_2889PING_2888PING_0617PING_2884PING_2882PING_3625PING_2887PING_2886PING_2885PING_2895PING_2894PING_2893PING_0288PING_2891PING_2881PING_2892
PHAL326442 PSHAA2549PSHAA2548PSHAA2547PSHAA2546PSHAA2541PSHAA2539PSHAA2545PSHAA2544PSHAA2543PSHAA2542PSHAA2555PSHAA2554PSHAA2553PSHAA2552PSHAA2550PSHAA2538PSHAA2551
PFLU220664 PFL_0917PFL_0919PFL_0920PFL_0926PFL_0891PFL_0921PFL_0922PFL_0923PFL_0911PFL_0912PFL_0913PFL_0914PFL_0916PFL_0927PFL_0915
PFLU216595 PFLU0884PFLU0886PFLU0887PFLU0891PFLU0893PFLU0858PFLU0888PFLU0889PFLU0890PFLU0878PFLU0879PFLU0880PFLU0881PFLU0883PFLU0894PFLU0882
PFLU205922 PFL_0859PFL_0861PFL_0862PFL_0866PFL_0868PFL_0833PFL_0863PFL_0864PFL_0865PFL_0853PFL_0854PFL_0855PFL_0856PFL_0858PFL_0869PFL_0857
PENT384676 PSEEN1095PSEEN1097PSEEN1098PSEEN1102PSEEN1104PSEEN1069PSEEN1099PSEEN1100PSEEN1101PSEEN1089PSEEN1090PSEEN1091PSEEN1092PSEEN1094PSEEN1105PSEEN1093
PCAR338963 PCAR_1940PCAR_1942PCAR_1943PCAR_0451PCAR_0890PCAR_2750PCAR_0447PCAR_0449PCAR_1930PCAR_1935PCAR_1936PCAR_1937PCAR_1939PCAR_2690PCAR_1938
PATL342610 PATL_0566PATL_0565PATL_0564PATL_0563PATL_0558PATL_0556PATL_0562PATL_0561PATL_0560PATL_0559PATL_0572PATL_0571PATL_0570PATL_0569PATL_0567PATL_0555PATL_0568
PAER208964 PA4460PA4458PA4457PA4453PA4451PA4456PA4455PA4454PA4466PA4465PA4464PA4463PA4461PA4450PA4462
PAER208963 PA14_57920PA14_57900PA14_57890PA14_57840PA14_57820PA14_57880PA14_57870PA14_57850PA14_57980PA14_57970PA14_57960PA14_57950PA14_57930PA14_57810PA14_57940
NOCE323261 NOC_2791NOC_2789NOC_2788NOC_2782NOC_2387NOC_2786NOC_2785NOC_2784NOC_2799NOC_2797NOC_2795NOC_2794NOC_2792NOC_2780NOC_2793
MSUC221988 MS1715MS1714MS0995MS0996MS1710MS1708MS1372MS1713MS1712MS1711MS2180MS1718MS1717MS0352MS1716MS1707
MPET420662 MPE_A0150MPE_A3808MPE_A3809MPE_A3097MPE_A0828MPE_A1716MPE_A3101MPE_A3100MPE_A3099MPE_A0324MPE_A3336MPE_A0225MPE_A0226MPE_A0149MPE_A0829MPE_A0148
MAQU351348 MAQU_2713MAQU_2711MAQU_2710MAQU_2706MAQU_2704MAQU_3399MAQU_2709MAQU_2708MAQU_2707MAQU_2719MAQU_2718MAQU_2717MAQU_2716MAQU_2714MAQU_2703MAQU_2715
LCHO395495 LCHO_4227LCHO_0183LCHO_0182LCHO_3390LCHO_1584LCHO_2147LCHO_3394LCHO_3393LCHO_3392LCHO_1031LCHO_3490LCHO_0472LCHO_0471LCHO_4226LCHO_1585LCHO_4225
KPNE272620 GKPORF_B2945GKPORF_B2944GKPORF_B2943GKPORF_B2942GKPORF_B2937GKPORF_B2935GKPORF_B2941GKPORF_B2940GKPORF_B2939GKPORF_B2938GKPORF_B2951GKPORF_B2950GKPORF_B2949GKPORF_B2948GKPORF_B2946GKPORF_B2934GKPORF_B2947
JSP375286 MMA_3350MMA_3348MMA_3347MMA_3295MMA_3291MMA_3299MMA_3298MMA_3297MMA_0174MMA_3120MMA_3118MMA_3353MMA_3351MMA_3290MMA_3352
ILOI283942 IL0398IL0399IL0400IL0401IL0406IL0408IL1064IL0403IL0404IL0405IL0392IL0393IL0394IL0395IL0397IL0409IL0396
HSOM228400 HSM_1592HSM_1591HSM_1397HSM_1396HSM_1587HSM_1585HSM_1563HSM_1590HSM_1589HSM_1588HSM_1595HSM_1594HSM_0761HSM_1593HSM_1584
HSOM205914 HS_1175HS_1174HS_0919HS_0918HS_1170HS_1168HS_1078HS_1173HS_1172HS_1171HS_1178HS_1177HS_0462HS_1176HS_1167
HHAL349124 HHAL_2124HHAL_2122HHAL_2121HHAL_2117HHAL_2115HHAL_0905HHAL_2120HHAL_2119HHAL_2118HHAL_2132HHAL_2130HHAL_2128HHAL_2127HHAL_2125HHAL_2114HHAL_2126
HCHE349521 HCH_05318HCH_05316HCH_05315HCH_05308HCH_03699HCH_05314HCH_05313HCH_05312HCH_05325HCH_05324HCH_05323HCH_05322HCH_05319HCH_05307HCH_05320
HARS204773 HEAR3107HEAR3105HEAR3104HEAR3076HEAR3072HEAR3080HEAR3079HEAR3078HEAR0148HEAR2885HEAR2883HEAR3110HEAR3108HEAR3071HEAR3109
ESP42895 ENT638_3636ENT638_3635ENT638_3634ENT638_3633ENT638_3628ENT638_3626ENT638_3632ENT638_3631ENT638_3630ENT638_3629ENT638_3642ENT638_3641ENT638_3640ENT638_3639ENT638_3637ENT638_3625ENT638_3638
EFER585054 EFER_3177EFER_3176EFER_3175EFER_3174EFER_3169EFER_3167EFER_3173EFER_3172EFER_3171EFER_3170EFER_3183EFER_3182EFER_3181EFER_3180EFER_3178EFER_3166EFER_3179
ECOO157 YHBNYRBKYRBIYRBHYRBCYRBAYRBGYRBFYRBEYRBDPTSOYHBJPTSNYHBHYHBGMURARPON
ECOL83334 ECS4079ECS4078ECS4077ECS4076ECS4071ECS4069ECS4075ECS4074ECS4073ECS4072ECS4085ECS4084ECS4083ECS4082ECS4080ECS4068ECS4081
ECOL585397 ECED1_3858ECED1_3857ECED1_3856ECED1_3855ECED1_3850ECED1_3848ECED1_3854ECED1_3853ECED1_3852ECED1_3851ECED1_3864ECED1_3863ECED1_3862ECED1_3861ECED1_3859ECED1_3847ECED1_3860
ECOL585057 ECIAI39_3695ECIAI39_3694ECIAI39_3693ECIAI39_3692ECIAI39_3687ECIAI39_3685ECIAI39_3691ECIAI39_3690ECIAI39_3689ECIAI39_3688ECIAI39_3701ECIAI39_3700ECIAI39_3699ECIAI39_3698ECIAI39_3696ECIAI39_3684ECIAI39_3697
ECOL585056 ECUMN_3680ECUMN_3679ECUMN_3678ECUMN_3677ECUMN_3672ECUMN_3670ECUMN_3676ECUMN_3675ECUMN_3674ECUMN_3673ECUMN_3686ECUMN_3685ECUMN_3684ECUMN_3683ECUMN_3681ECUMN_3669ECUMN_3682
ECOL585055 EC55989_3618EC55989_3617EC55989_3616EC55989_3615EC55989_3610EC55989_3608EC55989_3614EC55989_3613EC55989_3612EC55989_3611EC55989_3624EC55989_3623EC55989_3622EC55989_3621EC55989_3619EC55989_3607EC55989_3620
ECOL585035 ECS88_3583ECS88_3582ECS88_3581ECS88_3580ECS88_3574ECS88_3572ECS88_3578ECS88_3577ECS88_3576ECS88_3575ECS88_3590ECS88_3588ECS88_3587ECS88_3586ECS88_3584ECS88_3571ECS88_3585
ECOL585034 ECIAI1_3348ECIAI1_3347ECIAI1_3346ECIAI1_3345ECIAI1_3340ECIAI1_3338ECIAI1_3344ECIAI1_3343ECIAI1_3342ECIAI1_3341ECIAI1_3354ECIAI1_3353ECIAI1_3352ECIAI1_3351ECIAI1_3349ECIAI1_3337ECIAI1_3350
ECOL481805 ECOLC_0500ECOLC_0501ECOLC_0502ECOLC_0503ECOLC_0508ECOLC_0510ECOLC_0504ECOLC_0505ECOLC_0506ECOLC_0507ECOLC_0494ECOLC_0495ECOLC_0496ECOLC_0497ECOLC_0499ECOLC_0511ECOLC_0498
ECOL469008 ECBD_0542ECBD_0543ECBD_0544ECBD_0545ECBD_0550ECBD_0552ECBD_0546ECBD_0547ECBD_0548ECBD_0549ECBD_0536ECBD_0537ECBD_0538ECBD_0539ECBD_0541ECBD_0553ECBD_0540
ECOL439855 ECSMS35_3496ECSMS35_3495ECSMS35_3494ECSMS35_3493ECSMS35_3488ECSMS35_3486ECSMS35_3492ECSMS35_3491ECSMS35_3490ECSMS35_3489ECSMS35_3502ECSMS35_3501ECSMS35_3500ECSMS35_3499ECSMS35_3497ECSMS35_3485ECSMS35_3498
ECOL413997 ECB_03065ECB_03064ECB_03063ECB_03062ECB_03057ECB_03055ECB_03061ECB_03060ECB_03059ECB_03058ECB_03071ECB_03070ECB_03069ECB_03068ECB_03066ECB_03054ECB_03067
ECOL409438 ECSE_3484ECSE_3483ECSE_3482ECSE_3481ECSE_3476ECSE_3474ECSE_3480ECSE_3479ECSE_3478ECSE_3477ECSE_3490ECSE_3489ECSE_3488ECSE_3487ECSE_3485ECSE_3473ECSE_3486
ECOL405955 APECO1_3235APECO1_3236APECO1_3237APECO1_3238APECO1_3243APECO1_3244APECO1_3239APECO1_3240APECO1_3241APECO1_3242APECO1_3229APECO1_3230APECO1_3231APECO1_3232APECO1_3234APECO1_3245APECO1_3233
ECOL364106 UTI89_C3636UTI89_C3635UTI89_C3634UTI89_C3633UTI89_C3628UTI89_C3624UTI89_C3632UTI89_C3631UTI89_C3630UTI89_C3629UTI89_C3642UTI89_C3641UTI89_C3640UTI89_C3639UTI89_C3637UTI89_C3623UTI89_C3638
ECOL362663 ECP_3288ECP_3287ECP_3286ECP_3285ECP_3279ECP_3277ECP_3283ECP_3282ECP_3281ECP_3280ECP_3294ECP_3293ECP_3292ECP_3291ECP_3289ECP_3276ECP_3290
ECOL331111 ECE24377A_3688ECE24377A_3687ECE24377A_3686ECE24377A_3685ECE24377A_3679ECE24377A_3676ECE24377A_3684ECE24377A_3683ECE24377A_3682ECE24377A_3681ECE24377A_3694ECE24377A_3693ECE24377A_3692ECE24377A_3691ECE24377A_3689ECE24377A_3675ECE24377A_3690
ECOL316407 ECK3189:JW3167:B3200ECK3188:JW3166:B3199ECK3187:JW3165:B3198ECK3186:JW3164:B3197ECK3181:JW3159:B3192ECK3179:JW3157:B3190ECK3185:JW3163:B3196ECK3184:JW3162:B3195ECK3183:JW3161:B3194ECK3182:JW3160:B3193ECK3195:JW3173:B3206ECK3194:JW3172:B3205ECK3193:JW3171:B3204ECK3192:JW3170:B3203ECK3190:JW3168:B3201ECK3178:JW3156:B3189ECK3191:JW3169:B3202
ECOL199310 C3960C3959C3958C3957C3952C3948C3956C3955C3954C3953C3966C3965C3964C3963C3961C3947C3962
ECAR218491 ECA0290ECA0291ECA0292ECA0293ECA0298ECA0300ECA0294ECA0295ECA0296ECA0297ECA0284ECA0285ECA0286ECA0287ECA0289ECA0301ECA0288
DARO159087 DARO_3421DARO_3419DARO_3418DARO_3398DARO_3394DARO_3402DARO_3401DARO_3400DARO_4083DARO_0070DARO_4147DARO_4148DARO_4150DARO_3393DARO_4149
CVIO243365 CV_3330CV_3328CV_3327CV_0446CV_0439CV_2442CV_0449CV_0448CV_0447CV_0815CV_3336CV_3334CV_3333CV_3331CV_0440CV_3332
CSAL290398 CSAL_2224CSAL_2222CSAL_2221CSAL_2217CSAL_2215CSAL_2006CSAL_2220CSAL_2219CSAL_2218CSAL_2230CSAL_2229CSAL_2228CSAL_2227CSAL_2225CSAL_2214CSAL_2226
CPSY167879 CPS_4541CPS_4540CPS_4539CPS_4538CPS_4533CPS_4531CPS_4537CPS_4536CPS_4535CPS_4534CPS_4547CPS_4546CPS_4545CPS_4544CPS_4542CPS_4530CPS_4543
BVIE269482 BCEP1808_2894BCEP1808_2892BCEP1808_2891BCEP1808_0397BCEP1808_0401BCEP1808_3943BCEP1808_0393BCEP1808_0394BCEP1808_0395BCEP1808_2961BCEP1808_2900BCEP1808_2898BCEP1808_2897BCEP1808_2895BCEP1808_0402BCEP1808_2896
BTHA271848 BTH_I0488BTH_I0490BTH_I0491BTH_I3000BTH_I2996BTH_I3004BTH_I3003BTH_I3002BTH_I0412BTH_I0482BTH_I0484BTH_I0485BTH_I0487BTH_I2995BTH_I0486
BSP36773 BCEP18194_A6119BCEP18194_A6117BCEP18194_A6116BCEP18194_A3516BCEP18194_A3520BCEP18194_B2770BCEP18194_A3512BCEP18194_A3513BCEP18194_A3514BCEP18194_A6190BCEP18194_A6125BCEP18194_A6123BCEP18194_A6122BCEP18194_A6120BCEP18194_A3521BCEP18194_A6121
BPSE320372 BURPS1710B_A0809BURPS1710B_A0811BURPS1710B_A0812BURPS1710B_A3998BURPS1710B_A3994BURPS1710B_A4002BURPS1710B_A4001BURPS1710B_A4000BURPS1710B_A0698BURPS1710B_A0803BURPS1710B_A0805BURPS1710B_A0806BURPS1710B_A0808BURPS1710B_A3993BURPS1710B_A0807
BPSE272560 BPSL0535BPSL0537BPSL0538BPSL3146BPSL3142BPSL3150BPSL3149BPSL3148BPSL0439BPSL0529BPSL0531BPSL0532BPSL0534BPSL3141BPSL0533
BPET94624 BPET0452BPET0453BPET0144BPET0141BPET0912BPET0148BPET0147BPET0146BPET2830BPET0443BPET0447BPET0448BPET0449BPET0140BPET0085
BMAL320389 BMA10247_2944BMA10247_2946BMA10247_2947BMA10247_2772BMA10247_2768BMA10247_2776BMA10247_2775BMA10247_2774BMA10247_2833BMA10247_2938BMA10247_2940BMA10247_2941BMA10247_2943BMA10247_2767BMA10247_2942
BMAL320388 BMASAVP1_A0074BMASAVP1_A0072BMASAVP1_A0071BMASAVP1_A3232BMASAVP1_A3236BMASAVP1_A3228BMASAVP1_A3229BMASAVP1_A3230BMASAVP1_A0186BMASAVP1_A0080BMASAVP1_A0078BMASAVP1_A0077BMASAVP1_A0075BMASAVP1_A3237BMASAVP1_A0076
BMAL243160 BMA_3105BMA_3103BMA_3102BMA_2722BMA_2717BMA_2726BMA_2725BMA_2724BMA_3212BMA_3112BMA_3110BMA_3109BMA_3107BMA_2716BMA_3108
BCEN331272 BCEN2424_2789BCEN2424_2787BCEN2424_2786BCEN2424_0418BCEN2424_0422BCEN2424_3404BCEN2424_0414BCEN2424_0415BCEN2424_0416BCEN2424_2861BCEN2424_2795BCEN2424_2793BCEN2424_2792BCEN2424_2790BCEN2424_0423BCEN2424_2791
BCEN331271 BCEN_2175BCEN_2173BCEN_2172BCEN_2689BCEN_2685BCEN_4763BCEN_2693BCEN_2692BCEN_2691BCEN_2247BCEN_2181BCEN_2179BCEN_2178BCEN_2176BCEN_2684BCEN_2177
BBRO257310 BB4502BB4501BB4848BB4851BB3995BB4844BB4845BB4846BB2154BB4511BB4507BB4506BB4505BB4852BB4922
BAMB398577 BAMMC406_2707BAMMC406_2705BAMMC406_2704BAMMC406_0345BAMMC406_0349BAMMC406_3347BAMMC406_0341BAMMC406_0342BAMMC406_0343BAMMC406_2778BAMMC406_2713BAMMC406_2711BAMMC406_2710BAMMC406_2708BAMMC406_0350BAMMC406_2709
BAMB339670 BAMB_2849BAMB_2847BAMB_2846BAMB_0336BAMB_0340BAMB_5184BAMB_0332BAMB_0333BAMB_0334BAMB_2916BAMB_2855BAMB_2853BAMB_2852BAMB_2850BAMB_0341BAMB_2851
ASP76114 EBA1320EBA1316EBA1315EBA2206EBA1303EBA1313EBA1312EBA1311EBD68EBA3650EBA3391EBB108EBA3394EBA1302EBA3393
ASP62928 AZO0791AZO0793AZO0794AZO0810AZO0814AZO0806AZO0807AZO0808AZO3781AZO0399AZO0502AZO0503AZO0505AZO0815AZO0504
ASAL382245 ASA_0313ASA_0312ASA_0311ASA_0310ASA_0306ASA_0304ASA_1255ASA_0309ASA_0308ASA_0307ASA_0319ASA_0318ASA_0317ASA_0316ASA_0314ASA_0303ASA_0315
AHYD196024 AHA_3925AHA_3926AHA_3927AHA_3928AHA_3932AHA_3934AHA_1269AHA_3929AHA_3930AHA_3931AHA_3919AHA_3920AHA_3921AHA_3922AHA_3924AHA_3935AHA_3923
AFER243159 AFE_0083AFE_0081AFE_0080AFE_2865AFE_0073AFE_2453AFE_2868AFE_2867AFE_2866AFE_0091AFE_0089AFE_0087AFE_0086AFE_0084AFE_0071AFE_0085
AEHR187272 MLG_2228MLG_2226MLG_2225MLG_2220MLG_2218MLG_2224MLG_2223MLG_2222MLG_2221MLG_2234MLG_2233MLG_2232MLG_2231MLG_2229MLG_2217MLG_2230
ABAU360910 BAV3115BAV3114BAV3308BAV3311BAV2771BAV3304BAV3305BAV3306BAV1397BAV3158BAV3156BAV3155BAV3118BAV3312BAV3349
AAVE397945 AAVE_0417AAVE_4784AAVE_4785AAVE_1017AAVE_1021AAVE_1013AAVE_1014AAVE_1015AAVE_0353AAVE_3603AAVE_4557AAVE_4558AAVE_0418AAVE_1022AAVE_0419


Organism features enriched in list (features available for 120 out of the 125 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0001882792
Arrangment:Pairs 0.004184233112
Disease:Bubonic_plague 0.000068766
Disease:Dysentery 0.000068766
Disease:Gastroenteritis 0.00001511013
Disease:Glanders_and_pneumonia 0.008547633
Disease:Plant_rot 0.008547633
Endospores:No 0.000317028211
GC_Content_Range4:0-40 1.481e-214213
GC_Content_Range4:40-60 2.376e-1178224
GC_Content_Range7:30-40 7.321e-154166
GC_Content_Range7:50-60 5.141e-1047107
GC_Content_Range7:60-70 0.004318238134
Genome_Size_Range5:2-4 3.186e-915197
Genome_Size_Range5:4-6 9.856e-2586184
Genome_Size_Range5:6-10 0.00064581947
Genome_Size_Range9:2-3 3.015e-68120
Genome_Size_Range9:3-4 0.0024319777
Genome_Size_Range9:4-5 1.880e-94396
Genome_Size_Range9:5-6 4.912e-114388
Genome_Size_Range9:6-8 0.00008691838
Gram_Stain:Gram_Neg 2.667e-20110333
Habitat:Multiple 0.000638851178
Habitat:Specialized 0.0014500353
Motility:No 1.472e-89151
Motility:Yes 1.277e-1289267
Optimal_temp.:- 0.009488563257
Oxygen_Req:Aerobic 0.002335926185
Oxygen_Req:Anaerobic 2.110e-74102
Oxygen_Req:Facultative 5.139e-1477201
Pathogenic_in:Human 0.008419054213
Pathogenic_in:No 0.000715932226
Shape:Coccus 3.061e-8182
Shape:Rod 1.557e-14106347
Shape:Spiral 0.0028905134
Temp._range:Mesophilic 0.0074391106473
Temp._range:Psychrophilic 0.002979169



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ORGANISMS CONTAINING AT MOST 2 GENES FROM THE GROUP:

Total number of orgs: 110
Effective number of orgs (counting one per cluster within 468 clusters): 100

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis2
WPIP80849 Wolbachia endosymbiont of Brugia malayi2
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I2
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPEN368408 ncbi Thermofilum pendens Hrk 51
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4402
STOK273063 ncbi Sulfolobus tokodaii 71
SSOL273057 ncbi Sulfolobus solfataricus P21
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSP357808 ncbi Roseiflexus sp. RS-12
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332092
RALB246199 Ruminococcus albus 81
PTOR263820 ncbi Picrophilus torridus DSM 97900
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT31
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE51
OTSU357244 ncbi Orientia tsutsugamushi Boryong2
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H2
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS2
MSP164757 ncbi Mycobacterium sp. JLS2
MSP164756 ncbi Mycobacterium sp. MCS2
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1291
MPEN272633 ncbi Mycoplasma penetrans HF-22
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S21
MLEP272631 ncbi Mycobacterium leprae TN2
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2321
MHYO262722 ncbi Mycoplasma hyopneumoniae 74481
MHYO262719 ncbi Mycoplasma hyopneumoniae J1
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G371
MFLO265311 ncbi Mesoplasma florum L11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P22
MBOV233413 ncbi Mycobacterium bovis AF2122/972
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-31
MACE188937 ncbi Methanosarcina acetivorans C2A2
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82932
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167902
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI31
FALN326424 ncbi Frankia alni ACN14a1
ERUM302409 ncbi Ehrlichia ruminantium Gardel2
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden2
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas2
ECAN269484 ncbi Ehrlichia canis Jake2
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3822
CMIC31964 ncbi Clavibacter michiganensis sepedonicus2
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF81
CJEI306537 ncbi Corynebacterium jeikeium K4112
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131292
BXEN266265 ncbi Burkholderia xenovorans LB4002
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)2
BLON206672 ncbi Bifidobacterium longum NCC27052
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)2
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.2
APHA212042 ncbi Anaplasma phagocytophilum HZ2
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG11
AMAR234826 ncbi Anaplasma marginale St. Maries2
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACEL351607 ncbi Acidothermus cellulolyticus 11B2


Names of the homologs of the genes in the group in each of these orgs
  G7665   G7664   G7663   G7662   G7659   G7657   EG12802   EG12801   EG12800   EG12799   EG12147   EG12146   EG11682   EG11681   EG11680   EG11358   EG10898   
WPIP955 WD_0989WD_1105
WPIP80849 WB_0945WB_0028
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX953RCIX2235
TWHI218496
TWHI203267
TVOL273116
TROS309801
TPEN368408 TPEN_1091
TKOD69014 TK0867
TACI273075
STRO369723 STROP_4216STROP_3101
STOK273063 ST1422
SSOL273057 SSO0094
SMAR399550
SACI330779
RSP357808 ROSERS_1116ROSERS_3303
RSAL288705 RSAL33209_3182RSAL33209_2275
RALB246199 GRAORF_1682
PTOR263820
PISL384616
PHOR70601 PH0473
PFUR186497 PF0350
PAST100379
PARS340102
PAER178306
PABY272844 PAB1029
OTSU357244 OTBS_0495OTBS_1584
NSEN222891 NSE_0697
NPHA348780 NP4778A
MTHE349307
MTHE187420 MTH1071MTH1155
MSYN262723
MSTA339860
MSP189918 MKMS_0986MKMS_2443
MSP164757 MJLS_0996MJLS_2437
MSP164756 MMCS_0968MMCS_2396
MSED399549
MPUL272635
MPNE272634 MPN053
MPEN272633 MYPE2800MYPE7670
MMYC272632 MSC_0842
MMOB267748 MMOB4060
MMAZ192952 MM2660
MMAR444158 MMARC6_0115
MMAR426368 MMARC7_0321
MMAR402880 MMARC5_0521
MMAR368407 MEMAR_0354
MMAR267377 MMP0190
MLEP272631 ML1892ML0563
MLAB410358
MKAN190192 MK0951
MJAN243232 MJ_0091
MHYO295358 MHP628
MHYO262722 MHP7448_0609
MHYO262719 MHJ_0611
MHUN323259
MGEN243273 MG_041
MFLO265311 MFL181
MCAP340047 MCAP_0853
MBUR259564 MBUR_0430
MBOV410289 BCG_0704BCG_1482
MBOV233413 MB0674MB1456
MBAR269797 MBAR_A2253
MART243272
MAEO419665 MAEO_0716
MACE188937 MA3766MA3021
LXYL281090 LXX11490
LMES203120 LEUM_0800LEUM_0249
KRAD266940 KRAD_2934
IHOS453591
HWAL362976 HQ2334AHQ2708A
HSP64091 VNG0380G
HSAL478009 OE1564R
HMUK485914 HMUK_1419
HBUT415426
FSP1855 FRANEAN1_2060
FSP106370 FRANCCI3_1634
FALN326424 FRAAL4592
ERUM302409 ERGA_CDS_00470ERGA_CDS_01180
ERUM254945 ERWE_CDS_00480ERWE_CDS_01220
ECHA205920 ECH_0084ECH_0183
ECAN269484 ECAJ_0050ECAJ_0123
DSP255470
DSP216389
DETH243164
CSUL444179
CMIC443906 CMM_1505CMM_1747
CMIC31964 CMS1800CMS1991
CMET456442
CMAQ397948
CKOR374847 KCR_1255
CJEI306537 JK1711JK1004
CDIP257309 DIP1435DIP1313
BXEN266265 BXE_B0016BXE_B1172
BSP107806 BU385BU386
BLON206672 BL0705BL1718
BAPH372461 BCC_238
BAPH198804 BUSG372BUSG373
AYEL322098
AURANTIMONAS
ASP1667 ARTH_0174ARTH_2083
APHA212042 APH_0003APH_0045
APER272557
ANAE240017 ANA_0711
AMAR234826 AM1212AM074
AFUL224325
ACEL351607 ACEL_1111ACEL_0910


Organism features enriched in list (features available for 100 out of the 110 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.008367359
Arrangment:Chains 0.0002633592
Arrangment:Singles 0.000185065286
Endospores:No 8.508e-1368211
Endospores:Yes 0.0020227253
GC_Content_Range7:0-30 2.775e-62147
GC_Content_Range7:30-40 0.003356118166
Genome_Size_Range5:0-2 1.670e-1155155
Genome_Size_Range5:4-6 1.415e-711184
Genome_Size_Range9:0-1 3.908e-101927
Genome_Size_Range9:1-2 0.000169836128
Genome_Size_Range9:4-5 0.0001380596
Genome_Size_Range9:5-6 0.0016165688
Gram_Stain:Gram_Neg 3.248e-1029333
Habitat:Multiple 0.000153216178
Habitat:Specialized 0.00002692153
Motility:No 0.000599739151
Motility:Yes 0.001585033267
Optimal_temp.:- 0.004280833257
Optimal_temp.:100 0.004921533
Optimal_temp.:35-40 0.004921533
Optimal_temp.:85 0.000823144
Oxygen_Req:Anaerobic 1.521e-635102
Oxygen_Req:Facultative 0.002489223201
Pathogenic_in:Human 1.607e-715213
Pathogenic_in:No 0.000579253226
Pathogenic_in:Ruminant 0.004921533
Shape:Irregular_coccus 2.883e-141717
Shape:Rod 1.883e-1228347
Shape:Sphere 1.164e-101619
Temp._range:Hyperthermophilic 1.119e-91723
Temp._range:Mesophilic 9.686e-861473
Temp._range:Thermophilic 0.00201931335



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 49
Effective number of orgs (counting one per cluster within 468 clusters): 38

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
ILOI283942 ncbi Idiomarina loihiensis L2TR 8.541e-6161717
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 23270 8.951e-6129916
HHAL349124 ncbi Halorhodospira halophila SL1 0.0000232138016
TDEN292415 ncbi Thiobacillus denitrificans ATCC 25259 0.0000913150616
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC125 0.0000950186217
SDEN318161 ncbi Shewanella denitrificans OS217 0.0002073194917
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-1 0.0002198159316
CPSY167879 ncbi Colwellia psychrerythraea 34H 0.0002383196517
PATL342610 ncbi Pseudoalteromonas atlantica T6c 0.0002957199017
NOCE323261 ncbi Nitrosococcus oceani ATCC 19707 0.0004110137215
PING357804 ncbi Psychromonas ingrahamii 37 0.0004828204817
DNOD246195 ncbi Dichelobacter nodosus VCS1703A 0.000530794913
SACI56780 ncbi Syntrophus aciditrophicus SB 0.0006978118014
SLOI323850 ncbi Shewanella loihica PV-4 0.0008363211517
SSED425104 ncbi Shewanella sediminis HAW-EB3 0.0010979214917
NMEN122586 ncbi Neisseria meningitidis MC58 0.0011795122814
PCAR338963 ncbi Pelobacter carbinolicus DSM 2380 0.0012387148215
NMEN272831 ncbi Neisseria meningitidis FAM18 0.0012710123514
MPET420662 ncbi Methylibium petroleiphilum PM1 0.0013506179016
PNAP365044 ncbi Polaromonas naphthalenivorans CJ2 0.0013862179316
NMEN122587 ncbi Neisseria meningitidis Z2491 0.0014737124914
SHAL458817 ncbi Shewanella halifaxensis HAW-EB4 0.0016897220417
SONE211586 ncbi Shewanella oneidensis MR-1 0.0017294220717
HSOM205914 ncbi Haemophilus somnus 129PT 0.0019141152815
LCHO395495 ncbi Leptothrix cholodnii SP-6 0.0021237184316
SBAL399599 ncbi Shewanella baltica OS195 0.0023855224917
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G20 0.0025390130214
SBAL402882 ncbi Shewanella baltica OS185 0.0025537225817
HSOM228400 ncbi Haemophilus somnus 2336 0.0027629156815
SSP94122 ncbi Shewanella sp. ANA-3 0.0029242227617
VFIS312309 ncbi Vibrio fischeri ES114 0.0030815228317
MAQU351348 ncbi Marinobacter aquaeolei VT8 0.0032408189416
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N16961 0.0034972230017
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 1 0.0036590133914
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E 0.0038745191616
LPNE297245 ncbi Legionella pneumophila Lens 0.0041893135314
HDUC233412 ncbi Haemophilus ducreyi 35000HP 0.0043117135614
LPNE400673 ncbi Legionella pneumophila Corby 0.0043951135814
LPNE297246 ncbi Legionella pneumophila Paris 0.0045664136214
VCHO345073 ncbi Vibrio cholerae O395 0.0047274234117
SGLO343509 ncbi Sodalis glossinidius morsitans 0.0055455196116
PPUT160488 ncbi Pseudomonas putida KT2440 0.0066356238817
XFAS405440 ncbi Xylella fastidiosa M12 0.0071171117713
XFAS183190 ncbi Xylella fastidiosa Temecula1 0.0080299118913
NGON242231 ncbi Neisseria gonorrhoeae FA 1090 0.0081105119013
HARS204773 ncbi Herminiimonas arsenicoxydans 0.0083741169615
PPUT76869 ncbi Pseudomonas putida GB-1 0.0088713242917
PPUT351746 ncbi Pseudomonas putida F1 0.0091237243317
ASP76114 ncbi Aromatoleum aromaticum EbN1 0.0095564171215


Names of the homologs of the genes in the group in each of these orgs
  G7665   G7664   G7663   G7662   G7659   G7657   EG12802   EG12801   EG12800   EG12799   EG12147   EG12146   EG11682   EG11681   EG11680   EG11358   EG10898   
ILOI283942 IL0398IL0399IL0400IL0401IL0406IL0408IL1064IL0403IL0404IL0405IL0392IL0393IL0394IL0395IL0397IL0409IL0396
AFER243159 AFE_0083AFE_0081AFE_0080AFE_2865AFE_0073AFE_2453AFE_2868AFE_2867AFE_2866AFE_0091AFE_0089AFE_0087AFE_0086AFE_0084AFE_0071AFE_0085
HHAL349124 HHAL_2124HHAL_2122HHAL_2121HHAL_2117HHAL_2115HHAL_0905HHAL_2120HHAL_2119HHAL_2118HHAL_2132HHAL_2130HHAL_2128HHAL_2127HHAL_2125HHAL_2114HHAL_2126
TDEN292415 TBD_0535TBD_0537TBD_0538TBD_1896TBD_1892TBD_2520TBD_1900TBD_1899TBD_1898TBD_2413TBD_0529TBD_0531TBD_0532TBD_0534TBD_1891TBD_0533
PHAL326442 PSHAA2549PSHAA2548PSHAA2547PSHAA2546PSHAA2541PSHAA2539PSHAA2545PSHAA2544PSHAA2543PSHAA2542PSHAA2555PSHAA2554PSHAA2553PSHAA2552PSHAA2550PSHAA2538PSHAA2551
SDEN318161 SDEN_0491SDEN_0492SDEN_0493SDEN_0494SDEN_0499SDEN_0501SDEN_0495SDEN_0496SDEN_0497SDEN_0498SDEN_0485SDEN_0486SDEN_0487SDEN_0488SDEN_0490SDEN_0502SDEN_0489
AEHR187272 MLG_2228MLG_2226MLG_2225MLG_2220MLG_2218MLG_2224MLG_2223MLG_2222MLG_2221MLG_2234MLG_2233MLG_2232MLG_2231MLG_2229MLG_2217MLG_2230
CPSY167879 CPS_4541CPS_4540CPS_4539CPS_4538CPS_4533CPS_4531CPS_4537CPS_4536CPS_4535CPS_4534CPS_4547CPS_4546CPS_4545CPS_4544CPS_4542CPS_4530CPS_4543
PATL342610 PATL_0566PATL_0565PATL_0564PATL_0563PATL_0558PATL_0556PATL_0562PATL_0561PATL_0560PATL_0559PATL_0572PATL_0571PATL_0570PATL_0569PATL_0567PATL_0555PATL_0568
NOCE323261 NOC_2791NOC_2789NOC_2788NOC_2782NOC_2387NOC_2786NOC_2785NOC_2784NOC_2799NOC_2797NOC_2795NOC_2794NOC_2792NOC_2780NOC_2793
PING357804 PING_2890PING_2889PING_2888PING_0617PING_2884PING_2882PING_3625PING_2887PING_2886PING_2885PING_2895PING_2894PING_2893PING_0288PING_2891PING_2881PING_2892
DNOD246195 DNO_0534DNO_0536DNO_0856DNO_1111DNO_0859DNO_0858DNO_0857DNO_0119DNO_0399DNO_0614DNO_0533DNO_0853DNO_0532
SACI56780 SYN_00947SYN_00949SYN_00471SYN_02270SYN_00410SYN_00411SYN_01264SYN_01728SYN_00941SYN_00943SYN_00944SYN_00946SYN_01793SYN_00945
SLOI323850 SHEW_3309SHEW_3308SHEW_3307SHEW_3306SHEW_3301SHEW_3299SHEW_3305SHEW_3304SHEW_3303SHEW_3302SHEW_3315SHEW_3314SHEW_3313SHEW_3312SHEW_3310SHEW_3298SHEW_3311
SSED425104 SSED_0728SSED_0729SSED_0730SSED_0731SSED_0736SSED_0738SSED_0732SSED_0733SSED_0734SSED_0735SSED_0722SSED_0723SSED_0724SSED_0725SSED_0727SSED_0739SSED_0726
NMEN122586 NMB_0355NMB_0353NMB_0352NMB_1963NMB_0009NMB_1966NMB_1965NMB_1964NMB_2045NMB_0738NMB_0736NMB_0356NMB_0011NMB_0217
PCAR338963 PCAR_1940PCAR_1942PCAR_1943PCAR_0451PCAR_0890PCAR_2750PCAR_0447PCAR_0449PCAR_1930PCAR_1935PCAR_1936PCAR_1937PCAR_1939PCAR_2690PCAR_1938
NMEN272831 NMC1813NMC1815NMC1816NMC1935NMC2147NMC1938NMC1937NMC1936NMC2025NMC0691NMC0689NMC1812NMC2149NMC0212
MPET420662 MPE_A0150MPE_A3808MPE_A3809MPE_A3097MPE_A0828MPE_A1716MPE_A3101MPE_A3100MPE_A3099MPE_A0324MPE_A3336MPE_A0225MPE_A0226MPE_A0149MPE_A0829MPE_A0148
PNAP365044 PNAP_3708PNAP_4107PNAP_4108PNAP_0689PNAP_0693PNAP_2983PNAP_0685PNAP_0686PNAP_0687PNAP_0238PNAP_0906PNAP_3793PNAP_3794PNAP_3709PNAP_0694PNAP_3710
NMEN122587 NMA2132NMA2134NMA2135NMA0488NMA0256NMA0485NMA0486NMA0487NMA0391NMA0948NMA0946NMA2131NMA0258NMA0049
SHAL458817 SHAL_3703SHAL_3702SHAL_3701SHAL_3700SHAL_3695SHAL_3693SHAL_3699SHAL_3698SHAL_3697SHAL_3696SHAL_3709SHAL_3708SHAL_3707SHAL_3706SHAL_3704SHAL_3692SHAL_3705
SONE211586 SO_3959SO_3958SO_3957SO_3956SO_3951SO_3949SO_0354SO_3954SO_3953SO_3952SO_3965SO_3964SO_3963SO_3962SO_3960SO_3948SO_3961
HSOM205914 HS_1175HS_1174HS_0919HS_0918HS_1170HS_1168HS_1078HS_1173HS_1172HS_1171HS_1178HS_1177HS_0462HS_1176HS_1167
LCHO395495 LCHO_4227LCHO_0183LCHO_0182LCHO_3390LCHO_1584LCHO_2147LCHO_3394LCHO_3393LCHO_3392LCHO_1031LCHO_3490LCHO_0472LCHO_0471LCHO_4226LCHO_1585LCHO_4225
SBAL399599 SBAL195_0718SBAL195_0719SBAL195_0720SBAL195_0721SBAL195_0725SBAL195_0727SBAL195_0355SBAL195_0722SBAL195_0723SBAL195_0724SBAL195_0712SBAL195_0713SBAL195_0714SBAL195_0715SBAL195_0717SBAL195_0728SBAL195_0716
DDES207559 DDE_1767DDE_0335DDE_2300DDE_1854DDE_2298DDE_2297DDE_2299DDE_1090DDE_1774DDE_1773DDE_1772DDE_1770DDE_0546DDE_1771
SBAL402882 SHEW185_0688SHEW185_0689SHEW185_0690SHEW185_0691SHEW185_0695SHEW185_0697SHEW185_0348SHEW185_0692SHEW185_0693SHEW185_0694SHEW185_0682SHEW185_0683SHEW185_0684SHEW185_0685SHEW185_0687SHEW185_0698SHEW185_0686
HSOM228400 HSM_1592HSM_1591HSM_1397HSM_1396HSM_1587HSM_1585HSM_1563HSM_1590HSM_1589HSM_1588HSM_1595HSM_1594HSM_0761HSM_1593HSM_1584
SSP94122 SHEWANA3_0674SHEWANA3_0675SHEWANA3_0676SHEWANA3_0677SHEWANA3_0681SHEWANA3_0683SHEWANA3_3815SHEWANA3_0678SHEWANA3_0679SHEWANA3_0680SHEWANA3_0668SHEWANA3_0669SHEWANA3_0670SHEWANA3_0671SHEWANA3_0673SHEWANA3_0684SHEWANA3_0672
VFIS312309 VF0389VF0390VF0391VF0392VF0397VF0400VF0393VF0394VF0395VF0396VF0383VF0384VF0385VF0386VF0388VF0401VF0387
MAQU351348 MAQU_2713MAQU_2711MAQU_2710MAQU_2706MAQU_2704MAQU_3399MAQU_2709MAQU_2708MAQU_2707MAQU_2719MAQU_2718MAQU_2717MAQU_2716MAQU_2714MAQU_2703MAQU_2715
VCHO VC2527VC2525VC2524VC2523VC2517VC2515VC2522VC2520VC2519VC2518VC2533VC2532VC2531VC2530VC2528VC2514VC2529
LPNE272624 LPG0837LPG0839LPG0840LPG0844LPG0846LPG0897LPG0841LPG0842LPG0843LPG0475LPG0476LPG0836LPG0847LPG0477
MSUC221988 MS1715MS1714MS0995MS0996MS1710MS1708MS1372MS1713MS1712MS1711MS2180MS1718MS1717MS0352MS1716MS1707
LPNE297245 LPL0868LPL0870LPL0871LPL0875LPL0877LPL0928LPL0872LPL0873LPL0874LPL0516LPL0517LPL0867LPL0878LPL0518
HDUC233412 HD_0587HD_0588HD_0297HD_1168HD_0256HD_0254HD_0810HD_0259HD_0258HD_0257HD_0584HD_0585HD_0586HD_0253
LPNE400673 LPC_2458LPC_2456LPC_2455LPC_2451LPC_2449LPC_2396LPC_2454LPC_2453LPC_2452LPC_2869LPC_2868LPC_2459LPC_2448LPC_2867
LPNE297246 LPP0899LPP0901LPP0902LPP0906LPP0908LPP0958LPP0903LPP0904LPP0905LPP0540LPP0541LPP0898LPP0909LPP0542
VCHO345073 VC0395_A2107VC0395_A2106VC0395_A2105VC0395_A2104VC0395_A2099VC0395_A2097VC0395_A2103VC0395_A2102VC0395_A2101VC0395_A2100VC0395_A2113VC0395_A2112VC0395_A2111VC0395_A2110VC0395_A2108VC0395_A2096VC0395_A2109
SGLO343509 SG0201SG0202SG0203SG0204SG0208SG0210SG0205SG0206SG0207SG0195SG0196SG0197SG0198SG0200SG0211SG0199
PPUT160488 PP_0954PP_0955PP_0956PP_0957PP_0961PP_0963PP_0928PP_0958PP_0959PP_0960PP_0948PP_0949PP_0950PP_0951PP_0953PP_0964PP_0952
XFAS405440 XFASM12_0758XFASM12_0760XFASM12_0761XFASM12_1819XFASM12_1816XFASM12_1817XFASM12_1818XFASM12_0751XFASM12_0753XFASM12_0755XFASM12_0757XFASM12_0763XFASM12_0756
XFAS183190 PD_0639PD_0641PD_0642PD_1657PD_1654PD_1655PD_1656PD_0632PD_0634PD_0636PD_0638PD_0644PD_0637
NGON242231 NGO1606NGO1608NGO1609NGO2119NGO1920NGO2116NGO2117NGO2118NGO2037NGO0315NGO0313NGO1605NGO1918
HARS204773 HEAR3107HEAR3105HEAR3104HEAR3076HEAR3072HEAR3080HEAR3079HEAR3078HEAR0148HEAR2885HEAR2883HEAR3110HEAR3108HEAR3071HEAR3109
PPUT76869 PPUTGB1_0961PPUTGB1_0962PPUTGB1_0963PPUTGB1_0964PPUTGB1_0968PPUTGB1_0970PPUTGB1_0935PPUTGB1_0965PPUTGB1_0966PPUTGB1_0967PPUTGB1_0955PPUTGB1_0956PPUTGB1_0957PPUTGB1_0958PPUTGB1_0960PPUTGB1_0971PPUTGB1_0959
PPUT351746 PPUT_0993PPUT_0994PPUT_0995PPUT_0996PPUT_1000PPUT_1002PPUT_0968PPUT_0997PPUT_0998PPUT_0999PPUT_0987PPUT_0988PPUT_0989PPUT_0990PPUT_0992PPUT_1003PPUT_0991
ASP76114 EBA1320EBA1316EBA1315EBA2206EBA1303EBA1313EBA1312EBA1311EBD68EBA3650EBA3391EBB108EBA3394EBA1302EBA3393


Organism features enriched in list (features available for 49 out of the 49 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Cholera 0.006931822
Disease:Legionnaire's_disease 0.000044544
Disease:Meningitis_and_septicemia 0.002065134
Disease:and_reproductive_problems 0.006931822
Disease:arthritis 0.006931822
Disease:myocarditis 0.006931822
GC_Content_Range4:0-40 0.00226699213
GC_Content_Range4:40-60 0.000416530224
Genome_Size_Range5:0-2 0.00002352155
Genome_Size_Range5:2-4 0.008652624197
Genome_Size_Range9:1-2 0.00033322128
Gram_Stain:Gram_Neg 2.150e-744333
Habitat:Aquatic 0.00100681691
Motility:No 0.00883346151
Motility:Yes 0.009407630267
Optimal_temp.:10 0.006931822
Optimal_temp.:35-37 0.0000213713
Optimal_temp.:37 0.00236072106
Shape:Curved_rod 0.004752635
Temp._range:Psychrophilic 0.000317059



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
AST-PWY (arginine degradation II (AST pathway))120890.6598
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181220.6577
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951070.5867
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761010.5848
GALACTITOLCAT-PWY (galactitol degradation)73610.5776
GLYCOCAT-PWY (glycogen degradation I)2461170.5546
ECASYN-PWY (enterobacterial common antigen biosynthesis)191990.5275
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81600.5214
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251060.5078
PWY-5918 (heme biosynthesis I)2721170.5045
GLUCARDEG-PWY (D-glucarate degradation I)152840.4993
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)149830.4990
PWY-5148 (acyl-CoA hydrolysis)2271050.4952
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001210.4878
PWY-6196 (serine racemization)102650.4824
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861170.4795
LIPASYN-PWY (phospholipases)212990.4776
PWY-4041 (γ-glutamyl cycle)2791140.4676
PWY-5386 (methylglyoxal degradation I)3051190.4635
PWY-5913 (TCA cycle variation IV)3011180.4620
GLUCONSUPER-PWY (D-gluconate degradation)2291010.4576
PWY-1269 (CMP-KDO biosynthesis I)3251220.4557
LPSSYN-PWY (superpathway of lipopolysaccharide biosynthesis)91580.4510
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491050.4504
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491050.4504
PWY0-981 (taurine degradation IV)106630.4451
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation)212950.4438
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391230.4425
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901130.4404
PWY0-901 (selenocysteine biosynthesis I (bacteria))230990.4390
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911130.4387
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961140.4383
PWY-46 (putrescine biosynthesis III)138730.4373
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)135720.4369
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))183860.4337
TYRFUMCAT-PWY (tyrosine degradation I)184860.4312
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50390.4273
PWY-561 (superpathway of glyoxylate cycle)162790.4248
GLUTDEG-PWY (glutamate degradation II)194880.4248
GLYOXYLATE-BYPASS (glyoxylate cycle)169810.4245
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481220.4211
PWY0-1182 (trehalose degradation II (trehalase))70470.4182
GALACTARDEG-PWY (D-galactarate degradation I)151750.4181
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001120.4156
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))191860.4144
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))138700.4084
CHOLINE-BETAINE-ANA-PWY (choline degradation I)135690.4077
GLUTAMINDEG-PWY (glutamine degradation I)191850.4058
GLYCOLATEMET-PWY (glycolate and glyoxylate degradation I)2701040.4030



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7664   G7663   G7662   G7659   G7657   EG12802   EG12801   EG12800   EG12799   EG12147   EG12146   EG11682   EG11681   EG11680   EG11358   EG10898   
G76650.9995170.9997630.9997230.9992930.9993630.9990760.9993960.9993640.9993310.9995040.9996230.99970.9996740.9998980.9993760.999775
G76640.9993750.9992810.9991760.9991380.9989980.99930.9992550.9992120.9991130.9992770.9993110.9991420.9994360.9991080.999284
G76630.9998450.9992450.9992990.9990610.9993830.9992750.9993150.9993860.999560.9995660.9996190.9997280.9992910.999641
G76620.9991910.9992790.9990450.9993050.9991270.9992070.9993080.999460.9995440.9995690.9996930.9992060.999531
G76590.999720.9989620.999760.9998040.9998350.9989990.9991120.9990880.9989890.9990980.9996370.999083
G76570.9988690.9996370.9996520.9996970.9991340.9991750.9991960.9989970.9992220.9998340.99927
EG128020.9991980.9989720.9990370.9986360.9987180.9987880.9985290.9988860.9986790.998805
EG128010.9999490.9998270.9988380.9990840.9989910.9990510.9990730.999520.999051
EG128000.999880.9988760.9990760.9989530.998960.9990410.9995110.998983
EG127990.9990030.9990630.9991140.9990410.9991280.9996140.999145
EG121470.9997440.999550.9994930.9995010.9989290.999523
EG121460.9997350.9997250.9996440.9991280.999739
EG116820.999770.9998650.999040.999801
EG116810.9997350.9991790.999835
EG116800.9991750.999952
EG113580.999227
EG10898



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PAIRWISE BLAST SCORES:

  G7665   G7664   G7663   G7662   G7659   G7657   EG12802   EG12801   EG12800   EG12799   EG12147   EG12146   EG11682   EG11681   EG11680   EG11358   EG10898   
G76650.0f0----------------
G7664-0.0f0---------------
G7663--0.0f0--------------
G7662---0.0f0-------------
G7659----0.0f0------------
G7657-----0.0f0-----------
EG12802------0.0f0----------
EG12801-------0.0f0---------
EG12800--------0.0f0--------
EG12799---------0.0f0-------
EG12147----------0.0f0------
EG12146-----------0.0f0-----
EG11682------------0.0f0----
EG11681-------------0.0f0---
EG11680--------------0.0f0--
EG11358---------------0.0f0-
EG10898----------------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis) (degree of match pw to cand: 0.125, degree of match cand to pw: 0.118, average score: 0.609)
  Genes in pathway or complex:
             0.8916 0.7608 EG10520 (waaA) KDOTRANS-MONOMER (KDO transferase)
             0.1437 0.0003 EG10545 (lpxA) UDPNACETYLGLUCOSAMACYLTRANS-MONOMER (LpxA)
             0.9562 0.8207 EG10265 (lpxC) UDPACYLGLCNACDEACETYL-MONOMER (UDP-3-O-acyl-N-acetylglucosamine deacetylase)
             0.1609 0.0003 EG10316 (lpxD) UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-MONO (UDP-3-O-[3-hydroxymyristoyl]glucosamine N-acetyltransferase)
             0.0811 0.0034 EG12666 (lpxH) EG12666-MONOMER (UDP-2,3-diacylglucosamine hydrolase)
             0.1734 0.0258 EG11409 (lpxK) TETRAACYLDISACC4KIN-MONOMER (tetraacyldisaccharide 4'-kinase)
             0.1683 0.0003 EG10546 (lpxB) LIPIDADISACCHARIDESYNTH-MONOMER (LpxB)
             0.7949 0.3690 EG10464 (lpxL) LAUROYLACYLTRAN-MONOMER (lauroyl acyltransferase)
             0.9298 0.7870 G7241 (lpxP) PALMITOTRANS-MONOMER (palmitoleoyl acyltransferase)
             0.5732 0.1098 EG10614 (lpxM) MYRISTOYLACYLTRAN-MONOMER (myristoyl-acyl carrier protein (ACP)-dependent acyltransferase)
             0.9992 0.9983 EG10973 (gutQ) EG10973-MONOMER (D-arabinose 5-phosphate isomerase)
   *in cand* 0.9994 0.9990 G7662 (kdsD) G7662-MONOMER (D-arabinose 5-phosphate isomerase)
             0.4568 0.0017 EG10518 (kdsA) KDO-8PSYNTH-MONOMER (3-deoxy-D-manno-octulosonate 8-phosphate synthase)
   *in cand* 0.9995 0.9991 G7663 (kdsC) G7663-MONOMER (3-deoxy-D-manno-octulosonate 8-phosphate phosphatase monomer)
             0.4121 0.0008 EG10519 (kdsB) CPM-KDOSYNTH-MONOMER (3-deoxy-D-manno-octulosonate cytidylyltransferase)
             0.0393 0.0003 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9988 EG10898 (rpoN) RPON-MONOMER (RNA polymerase, sigma 54 (sigma N) factor)
   *in cand* 0.9993 0.9987 EG11358 (murA) UDPNACETYLGLUCOSAMENOLPYRTRANS-MONOMER (UDP-N-acetylglucosamine enolpyruvoyl transferase)
   *in cand* 0.9995 0.9989 EG11680 (lptB) YHBG-MONOMER (LptB)
   *in cand* 0.9994 0.9985 EG11681 (hpf) EG11681-MONOMER (predicted ribosome-associated, sigma 54 modulation protein)
   *in cand* 0.9994 0.9988 EG11682 (ptsN) EG11682-MONOMER (phosphotransferase system enzyme IIA, regulates N metabolism)
   *in cand* 0.9994 0.9987 EG12146 (yhbJ) EG12146-MONOMER (predicted P-loop containing ATPase)
   *in cand* 0.9993 0.9986 EG12147 (npr) EG12147-MONOMER (phosphocarrier protein HPr-like NPr, nitrogen related, exchanges phosphate with Enzyme I, Hpr)
   *in cand* 0.9994 0.9990 EG12799 (mlaD) EG12799-MONOMER (MlaD)
   *in cand* 0.9993 0.9989 EG12800 (mlaE) YRBE-MONOMER (MlaE)
   *in cand* 0.9994 0.9988 EG12801 (mlaF) YRBF-MONOMER (MlaF)
   *in cand* 0.9990 0.9985 EG12802 (yrbG) YRBG-MONOMER (YrbG CaCA transporter)
   *in cand* 0.9994 0.9989 G7657 (yrbA) G7657-MONOMER (predicted DNA-binding transcriptional regulator)
   *in cand* 0.9994 0.9990 G7659 (mlaC) G7659-MONOMER (MlaC)
   *in cand* 0.9993 0.9990 G7664 (lptC) G7664-MONOMER (LptC)
   *in cand* 0.9996 0.9991 G7665 (lptA) YHBN-MONOMER (LptA)

- ABC-45-CPLX (phospholipid ABC transporter) (degree of match pw to cand: 0.800, degree of match cand to pw: 0.235, average score: 0.999)
  Genes in pathway or complex:
             0.9982 0.9975 G7658 (mlaB) G7658-MONOMER (MlaB)
   *in cand* 0.9994 0.9990 EG12799 (mlaD) EG12799-MONOMER (MlaD)
   *in cand* 0.9993 0.9989 EG12800 (mlaE) YRBE-MONOMER (MlaE)
   *in cand* 0.9994 0.9988 EG12801 (mlaF) YRBF-MONOMER (MlaF)
   *in cand* 0.9994 0.9990 G7659 (mlaC) G7659-MONOMER (MlaC)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9988 EG10898 (rpoN) RPON-MONOMER (RNA polymerase, sigma 54 (sigma N) factor)
   *in cand* 0.9993 0.9987 EG11358 (murA) UDPNACETYLGLUCOSAMENOLPYRTRANS-MONOMER (UDP-N-acetylglucosamine enolpyruvoyl transferase)
   *in cand* 0.9995 0.9989 EG11680 (lptB) YHBG-MONOMER (LptB)
   *in cand* 0.9994 0.9985 EG11681 (hpf) EG11681-MONOMER (predicted ribosome-associated, sigma 54 modulation protein)
   *in cand* 0.9994 0.9988 EG11682 (ptsN) EG11682-MONOMER (phosphotransferase system enzyme IIA, regulates N metabolism)
   *in cand* 0.9994 0.9987 EG12146 (yhbJ) EG12146-MONOMER (predicted P-loop containing ATPase)
   *in cand* 0.9993 0.9986 EG12147 (npr) EG12147-MONOMER (phosphocarrier protein HPr-like NPr, nitrogen related, exchanges phosphate with Enzyme I, Hpr)
   *in cand* 0.9990 0.9985 EG12802 (yrbG) YRBG-MONOMER (YrbG CaCA transporter)
   *in cand* 0.9994 0.9989 G7657 (yrbA) G7657-MONOMER (predicted DNA-binding transcriptional regulator)
   *in cand* 0.9994 0.9990 G7662 (kdsD) G7662-MONOMER (D-arabinose 5-phosphate isomerase)
   *in cand* 0.9995 0.9991 G7663 (kdsC) G7663-MONOMER (3-deoxy-D-manno-octulosonate 8-phosphate phosphatase monomer)
   *in cand* 0.9993 0.9990 G7664 (lptC) G7664-MONOMER (LptC)
   *in cand* 0.9996 0.9991 G7665 (lptA) YHBN-MONOMER (LptA)

- ABC-53-CPLX (LptABCFG ABC transporter) (degree of match pw to cand: 0.600, degree of match cand to pw: 0.176, average score: 0.907)
  Genes in pathway or complex:
   *in cand* 0.9993 0.9990 G7664 (lptC) G7664-MONOMER (LptC)
   *in cand* 0.9995 0.9989 EG11680 (lptB) YHBG-MONOMER (LptB)
   *in cand* 0.9996 0.9991 G7665 (lptA) YHBN-MONOMER (LptA)
             0.7356 0.4725 G7888 (lptF) G7888-MONOMER (LptF)
             0.8010 0.4104 G7889 (lptG) G7889-MONOMER (LptG)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9988 EG10898 (rpoN) RPON-MONOMER (RNA polymerase, sigma 54 (sigma N) factor)
   *in cand* 0.9993 0.9987 EG11358 (murA) UDPNACETYLGLUCOSAMENOLPYRTRANS-MONOMER (UDP-N-acetylglucosamine enolpyruvoyl transferase)
   *in cand* 0.9994 0.9985 EG11681 (hpf) EG11681-MONOMER (predicted ribosome-associated, sigma 54 modulation protein)
   *in cand* 0.9994 0.9988 EG11682 (ptsN) EG11682-MONOMER (phosphotransferase system enzyme IIA, regulates N metabolism)
   *in cand* 0.9994 0.9987 EG12146 (yhbJ) EG12146-MONOMER (predicted P-loop containing ATPase)
   *in cand* 0.9993 0.9986 EG12147 (npr) EG12147-MONOMER (phosphocarrier protein HPr-like NPr, nitrogen related, exchanges phosphate with Enzyme I, Hpr)
   *in cand* 0.9994 0.9990 EG12799 (mlaD) EG12799-MONOMER (MlaD)
   *in cand* 0.9993 0.9989 EG12800 (mlaE) YRBE-MONOMER (MlaE)
   *in cand* 0.9994 0.9988 EG12801 (mlaF) YRBF-MONOMER (MlaF)
   *in cand* 0.9990 0.9985 EG12802 (yrbG) YRBG-MONOMER (YrbG CaCA transporter)
   *in cand* 0.9994 0.9989 G7657 (yrbA) G7657-MONOMER (predicted DNA-binding transcriptional regulator)
   *in cand* 0.9994 0.9990 G7659 (mlaC) G7659-MONOMER (MlaC)
   *in cand* 0.9994 0.9990 G7662 (kdsD) G7662-MONOMER (D-arabinose 5-phosphate isomerase)
   *in cand* 0.9995 0.9991 G7663 (kdsC) G7663-MONOMER (3-deoxy-D-manno-octulosonate 8-phosphate phosphatase monomer)

- LPSSYN-PWY (superpathway of lipopolysaccharide biosynthesis) (degree of match pw to cand: 0.080, degree of match cand to pw: 0.118, average score: 0.607)
  Genes in pathway or complex:
             0.1437 0.0003 EG10545 (lpxA) UDPNACETYLGLUCOSAMACYLTRANS-MONOMER (LpxA)
             0.9562 0.8207 EG10265 (lpxC) UDPACYLGLCNACDEACETYL-MONOMER (UDP-3-O-acyl-N-acetylglucosamine deacetylase)
             0.1609 0.0003 EG10316 (lpxD) UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-MONO (UDP-3-O-[3-hydroxymyristoyl]glucosamine N-acetyltransferase)
             0.0811 0.0034 EG12666 (lpxH) EG12666-MONOMER (UDP-2,3-diacylglucosamine hydrolase)
             0.1734 0.0258 EG11409 (lpxK) TETRAACYLDISACC4KIN-MONOMER (tetraacyldisaccharide 4'-kinase)
             0.1683 0.0003 EG10546 (lpxB) LIPIDADISACCHARIDESYNTH-MONOMER (LpxB)
             0.9992 0.9983 EG10973 (gutQ) EG10973-MONOMER (D-arabinose 5-phosphate isomerase)
   *in cand* 0.9994 0.9990 G7662 (kdsD) G7662-MONOMER (D-arabinose 5-phosphate isomerase)
             0.4568 0.0017 EG10518 (kdsA) KDO-8PSYNTH-MONOMER (3-deoxy-D-manno-octulosonate 8-phosphate synthase)
   *in cand* 0.9995 0.9991 G7663 (kdsC) G7663-MONOMER (3-deoxy-D-manno-octulosonate 8-phosphate phosphatase monomer)
             0.4121 0.0008 EG10519 (kdsB) CPM-KDOSYNTH-MONOMER (3-deoxy-D-manno-octulosonate cytidylyltransferase)
             0.8916 0.7608 EG10520 (waaA) KDOTRANS-MONOMER (KDO transferase)
             0.5732 0.1098 EG10614 (lpxM) MYRISTOYLACYLTRAN-MONOMER (myristoyl-acyl carrier protein (ACP)-dependent acyltransferase)
             0.7949 0.3690 EG10464 (lpxL) LAUROYLACYLTRAN-MONOMER (lauroyl acyltransferase)
             0.7124 0.4684 EG11423 (waaK) EG11423-MONOMER (lipopolysaccharide core biosynthesis; heptosyl transferase IV; probably hexose transferase)
             0.7923 0.5749 EG11353 (waaJ) EG11353-MONOMER (UDP-glucose:(glucosyl)LPS α-1,2-glucosyltransferase)
             0.7434 0.4546 EG11352 (waaI) EG11352-MONOMER (UDP-D-glucose:(glucosyl)LPS α-1,3-glucosyltransferase)
             0.4753 0.1647 EG11351 (waaB) EG11351-MONOMER (UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase)
             0.8287 0.7695 EG11425 (waaY) EG11425-MONOMER (lipopolysaccharide core heptose (II) kinase)
             0.8070 0.6776 EG11341 (waaQ) EG11341-MONOMER (lipopolysaccharide core heptosyl transferase III)
             0.8109 0.7473 EG11340 (waaP) EG11340-MONOMER (lipopolysaccharide core heptose (I) kinase)
             0.6846 0.3633 EG11339 (waaG) EG11339-MONOMER (lipopolysaccharide glucosyltransferase I)
             0.8626 0.6957 EG12210 (waaF) EG12210-MONOMER (ADP-heptose:LPS heptosyltransferase II)
             0.8457 0.5875 EG11189 (waaC) EG11189-MONOMER (ADP-heptose:LPS heptosyl transferase I)
             0.0393 0.0003 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9988 EG10898 (rpoN) RPON-MONOMER (RNA polymerase, sigma 54 (sigma N) factor)
   *in cand* 0.9993 0.9987 EG11358 (murA) UDPNACETYLGLUCOSAMENOLPYRTRANS-MONOMER (UDP-N-acetylglucosamine enolpyruvoyl transferase)
   *in cand* 0.9995 0.9989 EG11680 (lptB) YHBG-MONOMER (LptB)
   *in cand* 0.9994 0.9985 EG11681 (hpf) EG11681-MONOMER (predicted ribosome-associated, sigma 54 modulation protein)
   *in cand* 0.9994 0.9988 EG11682 (ptsN) EG11682-MONOMER (phosphotransferase system enzyme IIA, regulates N metabolism)
   *in cand* 0.9994 0.9987 EG12146 (yhbJ) EG12146-MONOMER (predicted P-loop containing ATPase)
   *in cand* 0.9993 0.9986 EG12147 (npr) EG12147-MONOMER (phosphocarrier protein HPr-like NPr, nitrogen related, exchanges phosphate with Enzyme I, Hpr)
   *in cand* 0.9994 0.9990 EG12799 (mlaD) EG12799-MONOMER (MlaD)
   *in cand* 0.9993 0.9989 EG12800 (mlaE) YRBE-MONOMER (MlaE)
   *in cand* 0.9994 0.9988 EG12801 (mlaF) YRBF-MONOMER (MlaF)
   *in cand* 0.9990 0.9985 EG12802 (yrbG) YRBG-MONOMER (YrbG CaCA transporter)
   *in cand* 0.9994 0.9989 G7657 (yrbA) G7657-MONOMER (predicted DNA-binding transcriptional regulator)
   *in cand* 0.9994 0.9990 G7659 (mlaC) G7659-MONOMER (MlaC)
   *in cand* 0.9993 0.9990 G7664 (lptC) G7664-MONOMER (LptC)
   *in cand* 0.9996 0.9991 G7665 (lptA) YHBN-MONOMER (LptA)

- PWY-1269 (CMP-KDO biosynthesis I) (degree of match pw to cand: 0.400, degree of match cand to pw: 0.118, average score: 0.969)
  Genes in pathway or complex:
             0.4121 0.0008 EG10519 (kdsB) CPM-KDOSYNTH-MONOMER (3-deoxy-D-manno-octulosonate cytidylyltransferase)
   *in cand* 0.9995 0.9991 G7663 (kdsC) G7663-MONOMER (3-deoxy-D-manno-octulosonate 8-phosphate phosphatase monomer)
             0.4568 0.0017 EG10518 (kdsA) KDO-8PSYNTH-MONOMER (3-deoxy-D-manno-octulosonate 8-phosphate synthase)
   *in cand* 0.9994 0.9990 G7662 (kdsD) G7662-MONOMER (D-arabinose 5-phosphate isomerase)
             0.9992 0.9983 EG10973 (gutQ) EG10973-MONOMER (D-arabinose 5-phosphate isomerase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9988 EG10898 (rpoN) RPON-MONOMER (RNA polymerase, sigma 54 (sigma N) factor)
   *in cand* 0.9993 0.9987 EG11358 (murA) UDPNACETYLGLUCOSAMENOLPYRTRANS-MONOMER (UDP-N-acetylglucosamine enolpyruvoyl transferase)
   *in cand* 0.9995 0.9989 EG11680 (lptB) YHBG-MONOMER (LptB)
   *in cand* 0.9994 0.9985 EG11681 (hpf) EG11681-MONOMER (predicted ribosome-associated, sigma 54 modulation protein)
   *in cand* 0.9994 0.9988 EG11682 (ptsN) EG11682-MONOMER (phosphotransferase system enzyme IIA, regulates N metabolism)
   *in cand* 0.9994 0.9987 EG12146 (yhbJ) EG12146-MONOMER (predicted P-loop containing ATPase)
   *in cand* 0.9993 0.9986 EG12147 (npr) EG12147-MONOMER (phosphocarrier protein HPr-like NPr, nitrogen related, exchanges phosphate with Enzyme I, Hpr)
   *in cand* 0.9994 0.9990 EG12799 (mlaD) EG12799-MONOMER (MlaD)
   *in cand* 0.9993 0.9989 EG12800 (mlaE) YRBE-MONOMER (MlaE)
   *in cand* 0.9994 0.9988 EG12801 (mlaF) YRBF-MONOMER (MlaF)
   *in cand* 0.9990 0.9985 EG12802 (yrbG) YRBG-MONOMER (YrbG CaCA transporter)
   *in cand* 0.9994 0.9989 G7657 (yrbA) G7657-MONOMER (predicted DNA-binding transcriptional regulator)
   *in cand* 0.9994 0.9990 G7659 (mlaC) G7659-MONOMER (MlaC)
   *in cand* 0.9993 0.9990 G7664 (lptC) G7664-MONOMER (LptC)
   *in cand* 0.9996 0.9991 G7665 (lptA) YHBN-MONOMER (LptA)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10898 EG11358 EG11680 EG11681 EG11682 EG12146 EG12147 EG12799 EG12800 EG12801 EG12802 G7657 G7659 G7662 G7663 G7664 G7665 (centered at G7663)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7665   G7664   G7663   G7662   G7659   G7657   EG12802   EG12801   EG12800   EG12799   EG12147   EG12146   EG11682   EG11681   EG11680   EG11358   EG10898   
191/62386/623249/623332/623212/623208/623246/623306/623317/623240/623309/623381/623344/623346/623388/623397/623340/623
AAEO224324:0:Tyes1494-14921047--01037205-----253-385
AAUR290340:2:Tyes----------01865--354--
AAVE397945:0:Tyes64-43554356655659-65165265303194413441356566066
ABAC204669:0:Tyes--27290---18451844--2742--6041059605
ABAU360910:0:Tyes--172417231918192113771914191519160176717651763172719221961
ABOR393595:0:Tyes6-8910112112---01235124
ABUT367737:0:Tyes--92301389-128-57-----12191786-
ACAU438753:0:Tyes---368---18951894-3769-0-362428403623
ACEL351607:0:Tyes-----------200--0--
ACRY349163:8:Tyes---149850-949285927110274276--150113361851
ADEH290397:0:Tyes--40623954---30151733-504055405640582174057
AEHR187272:0:Tyes11-983176541716151412013
AFER243159:0:Tyes12-1092755223482758275727562018161513014
AHYD196024:0:Tyes25552556255725582562256402559256025612549255025512552255425652553
ALAI441768:0:Tyes------1024---74-1290---
AMAR234826:0:Tyes--------8200-------
AMAR329726:9:Tyes--18121809-4490019323835----26943628571-
AMET293826:0:Tyes------1909---8843622464425-03153
ANAE240017:0:Tyes-----------0-----
AORE350688:0:Tyes------0----329-2300-2367707
APHA212042:0:Tyes--------037-------
APLE416269:0:Tyes2932940343124912471320125212511250-290291-2921246-
APLE434271:0:Tno2993000352123412321312123712361235-296297-2981231-
ASAL382245:5:Tyes10987319216541615141311012
ASP1667:3:Tyes----------01923-----
ASP232721:2:Tyes--37443745448453-4444454460599354335445145452
ASP62928:0:Tyes400-402403419423-41541641734390104105107424106
ASP62977:0:Tyes789-78778624062-24092408240722312232-179030
ASP76114:2:Tyes14-12115211-987877137312281229123101230
AVAR240292:3:Tyes-----0-20931105----33061057852-
BABO262698:0:Tno---0-------------
BABO262698:1:Tno-------826--1845-4-01241
BAFZ390236:2:Fyes------0-------324-301
BAMB339670:2:Tno------0----------
BAMB339670:3:Tno2582-2580257948-0122650258825862585258392584
BAMB398577:2:Tno------0----------
BAMB398577:3:Tno2397-2395239448-0122469240324012400239892399
BAMY326423:0:Tyes----------0183110521878-20231783
BANT260799:0:Tno-----------145501490-15881442
BANT261594:2:Tno-----------145901493-15911447
BANT568206:2:Tyes-----------452904564-46664517
BANT592021:2:Tno-----------149601532-16371484
BAPH198804:0:Tyes-----0---------1-
BAPH372461:0:Tyes-----0-----------
BBAC264462:0:Tyes--694675-1144-77828263089----7050706
BBAC360095:0:Tyes---119--------1079-10820-
BBRO257310:0:Tyes--236823672714271718512710271127120237723732372237127182791
BBUR224326:21:Fno------0-------300-284
BCAN483179:0:Tno---0-------------
BCAN483179:1:Tno-------843--1912-4-0921
BCEN331271:1:Tno------0----------
BCEN331271:2:Tno3-10520516-5245235227697645155
BCEN331272:2:Tyes------0----------
BCEN331272:3:Tyes2371-2369236848-0122443237723752374237292373
BCER226900:1:Tyes-----------140501439-15361392
BCER288681:0:Tno-----------139001425-15271372
BCER315749:1:Tyes----------1260126301289-13641250
BCER405917:1:Tyes-----------145801491-16001445
BCER572264:1:Tno-----------142601461-15731397
BCIC186490:0:Tyes-----0-----7---1-
BCLA66692:0:Tyes----------2254263002663-34362619
BFRA272559:1:Tyes--29030--4099-3666-----3665-3928
BFRA295405:0:Tno--31510--4450-3969-----3968-4260
BGAR290434:2:Fyes------0-------316-295
BHAL272558:0:Tyes------0---266731633833202--3157
BHEN283166:0:Tyes---145------34-1-01305-
BHER314723:0:Fyes------0---287---309--
BJAP224911:0:Fyes---7069---52095381-2869-3-0-1
BLIC279010:0:Tyes----------02057532101-22462009
BLON206672:0:Tyes-----------0--1023--
BMAL243160:1:Tno349-34734661-10984503553533523500351
BMAL320388:1:Tno3-1030903094-308630873088114976430955
BMAL320389:1:Tyes174-17617751-987641681701711730172
BMEL224914:0:Tno---0-------------
BMEL224914:1:Tno-------0--1083-837-841715840
BMEL359391:0:Tno---0-------------
BMEL359391:1:Tno-------799--1777-4-01151
BOVI236:0:Tyes---0-------------
BOVI236:1:Tyes-------752--1661-3-01031
BPAR257311:0:Tno--1980197921972200-2193219421950198919851984198322012273
BPER257313:0:Tyes--50350432853287-3281328232831220496499-50032880
BPET94624:0:Tyes--36937060578386463622766360364365366560
BPSE272560:1:Tyes97-9910027232719-272727262725091939496271895
BPSE320372:1:Tno110-11211331683164-31723171317001041061071093163108
BPSE320373:1:Tno107-10810930863082-3090308930880102104-1063081105
BPUM315750:0:Tyes----------1087292302987-31282870
BQUI283165:0:Tyes---133------33-1-0985-
BSP107806:2:Tyes-----0---------1-
BSP36773:1:Tyes------0----------
BSP36773:2:Tyes2654-2652265148-0122726266026582657265592656
BSP376:0:Tyes---5823---47114916-575-0-361872
BSUB:0:Tyes----------60928016622854030002743
BSUI204722:0:Tyes---0-------------
BSUI204722:1:Tyes-------834--1872-4-0921
BSUI470137:0:Tno---0-------------
BSUI470137:1:Tno-------877--1724-4-01141
BTHA271848:1:Tno75-777825362532-254025392538069717274253173
BTHE226186:0:Tyes--441705--1417-2246--0--2245-903
BTHU281309:1:Tno-----------136001396-14961348
BTHU412694:1:Tno-----------127601312-14151263
BTRI382640:1:Tyes---154------38-1-01726-
BTUR314724:0:Fyes------0---286---308--
BVIE269482:6:Tyes------0----------
BVIE269482:7:Tyes2480-2478247748-0122547248624842483248192482
BWEI315730:4:Tyes-----------147001504-16051455
BXEN266265:1:Tyes----1124-----------0
CABO218497:0:Tyes---204----573---317-0-928
CACE272562:1:Tyes----------159429202630-3322487
CAULO:0:Tyes---2050---2108350735060-3406-341021413409
CBEI290402:0:Tyes-----------434513950-4550162
CBLO203907:0:Tyes12-412-3--------04-
CBLO291272:0:Tno12-424-3--------04-
CBOT36826:1:Tno-----------3181179711-062
CBOT441770:0:Tyes-----------3141169411-063
CBOT441771:0:Tno-----------3000169311-062
CBOT441772:1:Tno-----------3219179613-065
CBOT498213:1:Tno-----------3230176912-068
CBOT508765:1:Tyes--1795---546---7612796-0-29652522
CBOT515621:2:Tyes-----------336519370--53
CBOT536232:0:Tno-----------3482192611-062
CBUR227377:1:Tyes629-631632-4680610--625--627628633-
CBUR360115:1:Tno956-954953-4870974--960--958957952-
CBUR434922:2:Tno17-1920-70712140--13--151621-
CCAV227941:1:Tyes---200----603---328-0-960
CCHL340177:0:Tyes--828225--704237238-1630---01044535
CCON360104:2:Tyes368-3701059----------0-1
CCUR360105:0:Tyes--5830----920-----1022-1021
CDES477974:0:Tyes------0----173-1920-1271-
CDIF272563:1:Tyes---2954--645---2680333129432366-03104
CDIP257309:0:Tyes----------1250-----
CEFF196164:0:Fyes------0---14111284-----
CFEL264202:1:Tyes---784----360---652-996-0
CFET360106:0:Tyes--6951291----0-----361397362
CGLU196627:0:Tyes-------0--1273962-----
CHOM360107:1:Tyes--0139916--265------746599-
CHUT269798:0:Tyes--29650----2640-----3316-2831
CHYD246194:0:Tyes------20602195---116-020182311123
CJAP155077:0:Tyes1177-11751174117211712750--1184118311821181117811701180
CJEI306537:0:Tyes-------734---0-----
CJEJ192222:0:Tyes--0774708---968-----16-17
CJEJ195099:0:Tno--0837786---1027-----18-19
CJEJ354242:2:Tyes--0738678---933-----19-20
CJEJ360109:0:Tyes--100914050---1623-----988-987
CJEJ407148:0:Tno--0763704---965-----1820419
CKLU431943:1:Tyes-----------3381-3435257902847
CKOR374847:0:Tyes--------------0--
CMIC31964:2:Tyes----------0179-----
CMIC443906:2:Tyes----------0249-----
CMUR243161:1:Tyes---646------583-533-0-865
CNOV386415:0:Tyes----------8250-1615-1626117
CPEL335992:0:Tyes---4680---------466--
CPER195102:1:Tyes------1217---13210-1832-2328957
CPER195103:0:Tno------1451---155602162051-24971156
CPER289380:3:Tyes------1187---12890-1780-2201958
CPHY357809:0:Tyes----------150376-032473593-
CPNE115711:1:Tyes---202--------683-0-1065
CPNE115713:0:Tno---468--------0-677-726
CPNE138677:0:Tno---473--------0-684-735
CPNE182082:0:Tno---495--------0-712-762
CPRO264201:0:Fyes---1551----1518-935-075105-1674
CPSY167879:0:Tyes1110983176541716151412013
CRUT413404:0:Tyes0-90072-40718------344834486-
CSAL290398:0:Tyes229-2272262222200225224223235234233232230219231
CSP501479:1:Fyes--0--------------
CSP501479:6:Fyes------333-48-300298---0-
CSP501479:7:Fyes668--4080-------665-667--
CSP501479:8:Fyes-------1381-0------154
CSP78:2:Tyes---0370--23803723713452-3789-378524193786
CTEP194439:0:Tyes--5450---5657-1913---1605-908
CTET212717:0:Tyes---680--1901----2138-146-0193
CTRA471472:0:Tyes---647------584-535-0-870
CTRA471473:0:Tno---647------584-535-0-870
CVES412965:0:Tyes--7490377-593------247691378-
CVIO243365:0:Tyes2969-296729667020551098383297529732972297012971
DARO159087:0:Tyes3381-3379337833583354-3362336133604043041084109411133534110
DDES207559:0:Tyes--145201996-154219941993199576614591458145714552121456
DGEO319795:1:Tyes-----------136-7900--
DHAF138119:0:Tyes------0----1658-1684-17221655
DNOD246195:0:Tyes405--407716-9587197187170274-484404713403
DOLE96561:0:Tyes--716241798-1883526--2224012420733
DPSY177439:2:Tyes--343381---190119021900----023511
DRAD243230:3:Tyes-----------350-01029--
DRED349161:0:Tyes------22012900--02745-2770-28392684
DSHI398580:5:Tyes3486--34880-142122772276127066683482348334858533484
DVUL882:1:Tyes--145901077--10791080107866614651464-146130821462
ECAN269484:0:Tyes--------078-------
ECAR218491:0:Tyes678914161011121301235174
ECHA205920:0:Tyes--------094-------
ECOL199310:0:Tno131211105198761918171614015
ECOL316407:0:Tno1110983176541716151412013
ECOL331111:6:Tno131211105198761918171614015
ECOL362663:0:Tno12111093176541817161513014
ECOL364106:1:Tno131211105198761918171614015
ECOL405955:2:Tyes109872165431615141311012
ECOL409438:6:Tyes1110983176541716151412013
ECOL413997:0:Tno1110983176541716151412013
ECOL439855:4:Tno1110983176541716151412013
ECOL469008:0:Tno678914161011121301235174
ECOL481805:0:Tno678914161011121301235174
ECOL585034:0:Tno1110983176541716151412013
ECOL585035:0:Tno1110983176541716151412013
ECOL585055:0:Tno1110983176541716151412013
ECOL585056:2:Tno1110983176541716151412013
ECOL585057:0:Tno1110983176541716151412013
ECOL585397:0:Tno1110983176541716151412013
ECOL83334:0:Tno1110983176541716151412013
ECOLI:0:Tno1110983176541716151412013
ECOO157:0:Tno1110983176541716151412013
EFAE226185:3:Tyes-----------6701026--81
EFER585054:1:Tyes1110983176541716151412013
ELIT314225:0:Tyes------200-0-1641662368-262522322624
ERUM254945:0:Tyes--------079-------
ERUM302409:0:Tno--------076-------
ESP42895:1:Tyes1110983176541716151412013
FALN326424:0:Tyes-----------0-----
FJOH376686:0:Tyes--27080---40634062-----3-307
FMAG334413:1:Tyes----------6517159210-1140-
FNOD381764:0:Tyes------652----1093--0-1119
FNUC190304:0:Tyes--8221512------27416982100107013040-
FPHI484022:1:Tyes--1255100635-012---9241258--
FRANT:0:Tno--2260770772-768769----453223--
FSP106370:0:Tyes-----------0-----
FSP1855:0:Tyes-----------0-----
FSUC59374:0:Tyes------0913914-1178-1769-14283471427
FTUL351581:0:Tno--47680420-543---579479--
FTUL393011:0:Tno--44073320-543---531443--
FTUL393115:0:Tyes--2240752754-750751----449221--
FTUL401614:0:Tyes--57789220-543---966574--
FTUL418136:0:Tno--53523520-543---210532--
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