CANDIDATE ID: 41

CANDIDATE ID: 41

NUMBER OF GENES: 14
AVERAGE SCORE:    9.9941075e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG50003 (acpP) (b1094)
   Products of gene:
     - EG50003-MONOMER (apo-[acyl carrier protein])
       Regulatees:
     - ACP-MONOMER (holo-[acyl-carrier protein])
       Regulatees:
     - MYRISTOYL-ACP (myristoyl-ACP)
       Regulatees:
     - B-HYDROXYBUTYRYL-S-ACP (β-3-hydroxybutyryl-S-ACP)
       Regulatees:
     - LAUROYL-ACP (lauroyl-ACP)
       Regulatees:
     - TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
     - STEAROYL-ACYL-CARRIER-PROTEIN (stearoyl-ACP)
       Regulatees:
     - R-3-HYDROXYPALMITOYL-ACP (R-3-hydroxypalmitoyl-ACP)
     - BUTYRYL-ACP (butyryl-ACP)
       Regulatees:
     - OLEOYL-ACYL-CARRIER-PROTEIN (oleoyl-ACP)
       Regulatees:
     - ACETOACETYL-S-ACP (acetoacetyl-ACP)
       Regulatees:
     - MONOMER-4603 (3R-3-hydroxybutanoyl-ACP)
     - CROTONYL-ACP (crotonyl-[acp])
       Regulatees:
     - MONOMER-4565 (2-octenoyl-ACP)
     - CIS-DELTA5-DODECENOYL-ACP (cis-Δ5-dodecenoyl-ACP)
     - BUT-2-ENOYL-ACP (but-2-enoyl-ACP)
     - PALMITOLEOYL-ACP (palmitoleoyl-ACP)
       Regulatees:
     - BETA-KETO-CIS-DELTA5-DODECENOYL-ACP (β-keto-cis-Δ5-dodecenoyl-ACP)
     - TRANS-D2-DECENOYL-ACP (trans-Δ2-decenoyl-[acp])
       Regulatees:
     - BETA-HYDROXY-CIS-DELTA5-DODECENOYL-ACP (β-hydroxy-cis-Δ5-dodecenoyl-ACP)
     - LIPOYL-ACP (lipoyl-ACP)
       Regulatees:
     - 3R-3-HYDROXYOCTANOYL-ACP ((3R)-3-hydroxyoctanoyl-ACP)
     - CIS-3-4-DEHYDRODECANOYL-ACP (cis-3,4-dehydrodecanoyl-ACP)
     - 2-HEXADECENOYL-ACP (2-hexadecenoyl-ACP)
     - CIS-DELTA3-DECENOYL-ACP (cis-Δ3-decenoyl-ACP)
     - SUCC-ACP (succ-ACP)
     - BETA-HYDROXYDECANOYL-ACP (β-hydroxydecanoyl-ACP)
       Regulatees:
     - OCTANOYL-ACP (octanoyl-ACP)
       Regulatees:
     - ACETYL-ECACP (acetyl-ACP)
       Regulatees:

- EG12606 (fabF) (b1095)
   Products of gene:
     - 3-OXOACYL-ACP-SYNTHII-MONOMER (FabF)
     - 3-OXOACYL-ACP-SYNTHII-CPLX (KASII)
       Reactions:
        a palmitoleoyl-[acp] + a malonyl-[acp]  ->  a 3-oxo-cis-vaccenoyl-[acp] + CO2 + a holo-[acp]
         In pathways
         PWY-6284 (superpathway of unsaturated fatty acids biosynthesis (E. coli))
         PWY-6285 (PWY-6285)
         PWY-5973 (cis-vaccenate biosynthesis)
        a malonyl-[acp] + an acetyl-[acp]  ->  a holo-[acp] + an acetoacetyl-[acp] + CO2
         In pathways
         PWY0-881 (superpathway of fatty acid biosynthesis I (E. coli))
         FASYN-INITIAL-PWY (superpathway of fatty acid biosynthesis initiation (E. coli))
         PWY-5965 (fatty acid biosynthesis initiation III)
         PWY-5966 (fatty acid biosynthesis initiation II)
        a malonyl-[acp] + a 2,3,4-saturated fatty acyl-[acp]  ->  a holo-[acp] + a beta-ketoacyl-[acp] + CO2
         In pathways
         PWY0-881 (superpathway of fatty acid biosynthesis I (E. coli))
         FASYN-ELONG-PWY (fatty acid elongation -- saturated)

- EG12303 (ycfH) (b1100)
   Products of gene:
     - EG12303-MONOMER (predicted metallodependent hydrolase)

- EG12302 (tmk) (b1098)
   Products of gene:
     - DTMPKI-MONOMER (dTMP kinase)
       Reactions:
        dTMP + ATP  ->  dTDP + ADP + H+
         In pathways
         PWY0-166 (pyrimidine deoxyribonucleotides de novo biosynthesis I)
         PWY-6545 (PWY-6545)
         P1-PWY (P1-PWY)

- EG11500 (holB) (b1099)
   Products of gene:
     - EG11500-MONOMER (DNA polymerase III, δ prime subunit)
     - CPLX0-3801 (DNA polymerase III, preinitiation complex)
     - CPLX0-3803 (DNA polymerase III, holoenzyme)

- EG11494 (yceG) (b1097)
   Products of gene:
     - EG11494-MONOMER (predicted aminodeoxychorismate lyase)

- EG11493 (pabC) (b1096)
   Products of gene:
     - ADCLY-MONOMER (pabC)
     - ADCLY-CPLX (aminodeoxychorismate lyase)
       Reactions:
        4-amino-4-deoxychorismate  =  p-aminobenzoate + pyruvate + H+
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         FOLSYN-PWY (tetrahydrofolate biosynthesis)
         PWY-6543 (PWY-6543)
     - PABSYNMULTI-CPLX (para-aminobenzoate synthase multi-enzyme complex)

- EG11437 (plsX) (b1090)
   Products of gene:
     - EG11437-MONOMER (fatty acid/phospholipid synthesis protein)

- EG11318 (fabG) (b1093)
   Products of gene:
     - 3-OXOACYL-ACP-REDUCT-MONOMER (3-oxo-acyl-[acyl-carrier-protein] reductase)
       Reactions:
        a 3-oxo-glutaryl-[acp] methyl ester + NADPH + H+  ->  a 3-hydroxyglutaryl-[acp] methyl ester + NADP+
         In pathways
         BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I)
         PWY-6519 (7-keto-8-aminopelargonate biosynthesis I)
        a 3-oxo-pimeloyl-[acp] methyl ester + NADPH + H+  ->  a 3-hydroxypimeloyl-[acp] methyl ester + NADP+
         In pathways
         BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I)
         PWY-6519 (7-keto-8-aminopelargonate biosynthesis I)
        a 3-oxo-cis-delta9-hexadecenoyl-[acp] + NADPH + H+  ->  a 3-hydroxy cis delta9-hexadecenoyl-[acp] + NADP+
         In pathways
         PWY-6284 (superpathway of unsaturated fatty acids biosynthesis (E. coli))
         PWY-6285 (PWY-6285)
         PWY-6282 (palmitoleate biosynthesis I)
        a 3-oxo-cis-delta7-tetradecenoyl-[acp] + NADPH + H+  ->  a 3-hydroxy cis delta7-tetradecenoyl-[acp] + NADP+
         In pathways
         PWY-6284 (superpathway of unsaturated fatty acids biosynthesis (E. coli))
         PWY-6285 (PWY-6285)
         PWY-6282 (palmitoleate biosynthesis I)
        a 3-oxo-cis-delta5-dodecenoyl-[acp] + NADPH + H+  ->  a 3-hydroxy cis delta5-dodecenoyl-[acp] + NADP+
         In pathways
         PWY-6285 (PWY-6285)
         PWY-6284 (superpathway of unsaturated fatty acids biosynthesis (E. coli))
         PWY0-881 (superpathway of fatty acid biosynthesis I (E. coli))
         PWY0-862 (cis-dodecenoyl biosynthesis)
        a (3R)-3-hydroxyacyl-[acp] + NADP+  =  a beta-ketoacyl-[acp] + NADPH + H+
         In pathways
         PWY-5989 (PWY-5989)
         PWY-6284 (superpathway of unsaturated fatty acids biosynthesis (E. coli))
         PWY-5973 (cis-vaccenate biosynthesis)
         PWY-6285 (PWY-6285)
         PWY-6113 (PWY-6113)
         PWY-5156 (PWY-5156)
         PWY-5994 (PWY-5994)
         PWY-5971 (palmitate biosynthesis II (bacteria and plants))
         PWY0-881 (superpathway of fatty acid biosynthesis I (E. coli))
         FASYN-ELONG-PWY (fatty acid elongation -- saturated)

- EG11317 (fabD) (b1092)
   Products of gene:
     - MALONYL-COA-ACP-TRANSACYL-MONOMER (malonyl-CoA-ACP transacylase)
       Reactions:
        a holo-[acp] + malonyl-CoA  =  a malonyl-[acp] + coenzyme A
         In pathways
         PWY0-881 (superpathway of fatty acid biosynthesis I (E. coli))
         FASYN-INITIAL-PWY (superpathway of fatty acid biosynthesis initiation (E. coli))
         PWY-5156 (PWY-5156)
         PWY-6113 (PWY-6113)
         PWY-6285 (PWY-6285)
         PWY-4381 (fatty acid biosynthesis initiation I)

- EG11119 (yceD) (b1088)
   Products of gene:
     - EG11119-MONOMER (conserved protein)

- EG11118 (rluC) (b1086)
   Products of gene:
     - EG11118-MONOMER (23S rRNA pseudouridine synthase)
       Reactions:
        rRNA  ->  rRNA containing pseudouridine

- EG10890 (rpmF) (b1089)
   Products of gene:
     - EG10890-MONOMER (50S ribosomal subunit protein L32)
     - CPLX0-3962 (50S ribosomal subunit)
     - CPLX0-3964 (ribosome)

- EG10859 (rne) (b1084)
   Products of gene:
     - EG10859-MONOMER (RNase E)
     - CPLX0-3461 (ribonuclease E)
       Reactions:
        9S rRNA  ->  5S rRNA + 2 a single-stranded RNA
        RNase E mRNA processing substrate  ->  RNase E processing product mRNA + n a single-stranded RNA
        a polycistronic tRNA precursor  ->  a tRNA precursor with a 5' extension and a short 3' extension + a partially processed polycistronic tRNA precursor
         In pathways
         PWY0-1479 (tRNA processing pathway)
        a polycistronic tRNA precursor  ->  a tRNA precursor with a 5' extension and a long 3' trailer + a partially processed polycistronic tRNA precursor
         In pathways
         PWY0-1479 (tRNA processing pathway)
        RNase E degradation substrate mRNA  ->  n a single-stranded RNA + n a single-stranded RNA
       Regulatees:
        TU0-14273 (rne)
        TU0-14272 (rne)
        TU-8407 (rne)
     - CPLX0-2381 (degradosome)



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ORGANISMS CONTAINING AT LEAST 12 GENES FROM THE GROUP:

Total number of orgs: 194
Effective number of orgs (counting one per cluster within 468 clusters): 133

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175814
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295314
YPES386656 ncbi Yersinia pestis Pestoides F14
YPES377628 ncbi Yersinia pestis Nepal51614
YPES360102 ncbi Yersinia pestis Antiqua14
YPES349746 ncbi Yersinia pestis Angola14
YPES214092 ncbi Yersinia pestis CO9214
YPES187410 ncbi Yersinia pestis KIM 1014
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808114
XAUT78245 ncbi Xanthobacter autotrophicus Py213
VVUL216895 ncbi Vibrio vulnificus CMCP614
VVUL196600 ncbi Vibrio vulnificus YJ01614
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 221063314
VFIS312309 ncbi Vibrio fischeri ES11414
VEIS391735 ncbi Verminephrobacter eiseniae EF01-213
VCHO345073 ncbi Vibrio cholerae O39514
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N1696114
TTUR377629 ncbi Teredinibacter turnerae T790114
TDEN292415 ncbi Thiobacillus denitrificans ATCC 2525914
TCRU317025 ncbi Thiomicrospira crunogena XCL-214
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT214
STHE292459 ncbi Symbiobacterium thermophilum IAM 1486312
SSP94122 ncbi Shewanella sp. ANA-313
SSP644076 Silicibacter sp. TrichCH4B12
SSP292414 ncbi Ruegeria sp. TM104012
SSON300269 ncbi Shigella sonnei Ss04614
SSED425104 ncbi Shewanella sediminis HAW-EB314
SPRO399741 ncbi Serratia proteamaculans 56814
SPEA398579 ncbi Shewanella pealeana ATCC 70034514
SONE211586 ncbi Shewanella oneidensis MR-114
SMEL266834 ncbi Sinorhizobium meliloti 102112
SMED366394 ncbi Sinorhizobium medicae WSM41913
SLOI323850 ncbi Shewanella loihica PV-414
SHIGELLA ncbi Shigella flexneri 2a str. 2457T14
SHAL458817 ncbi Shewanella halifaxensis HAW-EB414
SGLO343509 ncbi Sodalis glossinidius morsitans14
SFLE373384 ncbi Shigella flexneri 5 str. 840113
SFLE198214 ncbi Shigella flexneri 2a str. 30114
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47613
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6714
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 915014
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1814
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty214
SDYS300267 ncbi Shigella dysenteriae Sd19714
SDEN318161 ncbi Shewanella denitrificans OS21714
SDEG203122 ncbi Saccharophagus degradans 2-4014
SBOY300268 ncbi Shigella boydii Sb22714
SBAL402882 ncbi Shewanella baltica OS18514
SBAL399599 ncbi Shewanella baltica OS19514
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 1702512
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 1702912
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.112
RSOL267608 ncbi Ralstonia solanacearum GMI100012
RPAL316058 ncbi Rhodopseudomonas palustris HaA212
RPAL316057 ncbi Rhodopseudomonas palustris BisB512
RPAL316056 ncbi Rhodopseudomonas palustris BisB1812
RPAL316055 ncbi Rhodopseudomonas palustris BisA5312
RMET266264 ncbi Ralstonia metallidurans CH3413
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 384113
RFER338969 ncbi Rhodoferax ferrireducens T11813
REUT381666 ncbi Ralstonia eutropha H1613
REUT264198 ncbi Ralstonia eutropha JMP13413
RETL347834 ncbi Rhizobium etli CFN 4213
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC300014
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a14
PSTU379731 ncbi Pseudomonas stutzeri A150114
PSP56811 Psychrobacter sp.12
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-113
PSP296591 ncbi Polaromonas sp. JS66612
PPUT76869 ncbi Pseudomonas putida GB-114
PPUT351746 ncbi Pseudomonas putida F114
PPUT160488 ncbi Pseudomonas putida KT244013
PPRO298386 ncbi Photobacterium profundum SS914
PNAP365044 ncbi Polaromonas naphthalenivorans CJ212
PMUL272843 ncbi Pasteurella multocida multocida Pm7012
PMEN399739 ncbi Pseudomonas mendocina ymp14
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO114
PING357804 ncbi Psychromonas ingrahamii 3714
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC12514
PFLU220664 ncbi Pseudomonas fluorescens Pf-514
PFLU216595 ncbi Pseudomonas fluorescens SBW2514
PFLU205922 ncbi Pseudomonas fluorescens Pf0-114
PENT384676 ncbi Pseudomonas entomophila L4814
PCRY335284 ncbi Psychrobacter cryohalolentis K513
PATL342610 ncbi Pseudoalteromonas atlantica T6c14
PARC259536 ncbi Psychrobacter arcticus 273-413
PAER208964 ncbi Pseudomonas aeruginosa PAO114
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA1414
OCAR504832 ncbi Oligotropha carboxidovorans OM513
NWIN323098 ncbi Nitrobacter winogradskyi Nb-25512
NOCE323261 ncbi Nitrosococcus oceani ATCC 1970714
NMUL323848 ncbi Nitrosospira multiformis ATCC 2519612
NMEN374833 ncbi Neisseria meningitidis 05344213
NMEN272831 ncbi Neisseria meningitidis FAM1813
NMEN122587 ncbi Neisseria meningitidis Z249113
NMEN122586 ncbi Neisseria meningitidis MC5813
NHAM323097 ncbi Nitrobacter hamburgensis X1413
NGON242231 ncbi Neisseria gonorrhoeae FA 109013
NEUT335283 ncbi Nitrosomonas eutropha C9113
NEUR228410 ncbi Nitrosomonas europaea ATCC 1971813
NARO279238 ncbi Novosphingobium aromaticivorans DSM 1244412
MTHE264732 ncbi Moorella thermoacetica ATCC 3907312
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E12
MSP409 Methylobacterium sp.12
MSP400668 ncbi Marinomonas sp. MWYL113
MSP266779 ncbi Chelativorans sp. BNC113
MPET420662 ncbi Methylibium petroleiphilum PM112
MLOT266835 ncbi Mesorhizobium loti MAFF30309912
MFLA265072 ncbi Methylobacillus flagellatus KT14
MEXT419610 ncbi Methylobacterium extorquens PA112
MCAP243233 ncbi Methylococcus capsulatus Bath14
MAQU351348 ncbi Marinobacter aquaeolei VT814
LPNE400673 ncbi Legionella pneumophila Corby12
LPNE297246 ncbi Legionella pneumophila Paris12
LPNE297245 ncbi Legionella pneumophila Lens12
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 112
LCHO395495 ncbi Leptothrix cholodnii SP-614
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857814
JSP375286 ncbi Janthinobacterium sp. Marseille13
ILOI283942 ncbi Idiomarina loihiensis L2TR13
HHAL349124 ncbi Halorhodospira halophila SL113
HDUC233412 ncbi Haemophilus ducreyi 35000HP12
HCHE349521 ncbi Hahella chejuensis KCTC 239613
ESP42895 Enterobacter sp.14
EFER585054 ncbi Escherichia fergusonii ATCC 3546914
ECOO157 ncbi Escherichia coli O157:H7 EDL93314
ECOL83334 Escherichia coli O157:H714
ECOL585397 ncbi Escherichia coli ED1a14
ECOL585057 ncbi Escherichia coli IAI3914
ECOL585056 ncbi Escherichia coli UMN02614
ECOL585055 ncbi Escherichia coli 5598914
ECOL585035 ncbi Escherichia coli S8814
ECOL585034 ncbi Escherichia coli IAI114
ECOL481805 ncbi Escherichia coli ATCC 873914
ECOL469008 ncbi Escherichia coli BL21(DE3)14
ECOL439855 ncbi Escherichia coli SMS-3-514
ECOL413997 ncbi Escherichia coli B str. REL60614
ECOL409438 ncbi Escherichia coli SE1114
ECOL405955 ncbi Escherichia coli APEC O112
ECOL364106 ncbi Escherichia coli UTI8914
ECOL362663 ncbi Escherichia coli 53614
ECOL331111 ncbi Escherichia coli E24377A13
ECOL316407 ncbi Escherichia coli K-12 substr. W311014
ECOL199310 ncbi Escherichia coli CFT07312
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104314
DARO159087 ncbi Dechloromonas aromatica RCB12
CVIO243365 ncbi Chromobacterium violaceum ATCC 1247214
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA12
CSAL290398 ncbi Chromohalobacter salexigens DSM 304314
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)12
CPSY167879 ncbi Colwellia psychrerythraea 34H14
CJAP155077 Cellvibrio japonicus14
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C12
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-11113
CBUR360115 ncbi Coxiella burnetii RSA 33113
CBUR227377 ncbi Coxiella burnetii RSA 49313
BVIE269482 ncbi Burkholderia vietnamiensis G413
BTHA271848 ncbi Burkholderia thailandensis E26414
BSUI470137 ncbi Brucella suis ATCC 2344512
BSUI204722 ncbi Brucella suis 133012
BSP376 Bradyrhizobium sp.12
BSP36773 Burkholderia sp.13
BPSE320373 ncbi Burkholderia pseudomallei 66814
BPSE272560 ncbi Burkholderia pseudomallei K9624314
BPET94624 Bordetella petrii14
BPER257313 ncbi Bordetella pertussis Tohama I14
BPAR257311 ncbi Bordetella parapertussis 1282214
BOVI236 Brucella ovis12
BMEL359391 ncbi Brucella melitensis biovar Abortus 230812
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M12
BMAL320389 ncbi Burkholderia mallei NCTC 1024713
BMAL320388 ncbi Burkholderia mallei SAVP113
BMAL243160 ncbi Burkholderia mallei ATCC 2334413
BJAP224911 ncbi Bradyrhizobium japonicum USDA 11012
BCEN331272 ncbi Burkholderia cenocepacia HI242413
BCEN331271 ncbi Burkholderia cenocepacia AU 105413
BCAN483179 ncbi Brucella canis ATCC 2336512
BBRO257310 ncbi Bordetella bronchiseptica RB5014
BAMB398577 ncbi Burkholderia ambifaria MC40-613
BAMB339670 ncbi Burkholderia ambifaria AMMD13
BABO262698 ncbi Brucella abortus bv. 1 str. 9-94112
ASP76114 ncbi Aromatoleum aromaticum EbN113
ASP62928 ncbi Azoarcus sp. BH7213
ASP232721 ncbi Acidovorax sp. JS4213
ASAL382245 ncbi Aeromonas salmonicida salmonicida A44914
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL0312
APLE416269 ncbi Actinobacillus pleuropneumoniae L2012
AHYD196024 Aeromonas hydrophila dhakensis14
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 2327012
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-113
ACAU438753 ncbi Azorhizobium caulinodans ORS 57112
ABOR393595 ncbi Alcanivorax borkumensis SK214
ABAU360910 ncbi Bordetella avium 197N13
AAVE397945 ncbi Acidovorax citrulli AAC00-113


Names of the homologs of the genes in the group in each of these orgs
  EG50003   EG12606   EG12303   EG12302   EG11500   EG11494   EG11493   EG11437   EG11318   EG11317   EG11119   EG11118   EG10890   EG10859   
YPSE349747 YPSIP31758_1579YPSIP31758_1580YPSIP31758_1585YPSIP31758_1583YPSIP31758_1584YPSIP31758_1582YPSIP31758_1581YPSIP31758_1575YPSIP31758_1578YPSIP31758_1577YPSIP31758_1573YPSIP31758_1570YPSIP31758_1574YPSIP31758_1569
YPSE273123 YPTB2470YPTB2469YPTB2464YPTB2466YPTB2465YPTB2467YPTB2468YPTB2474YPTB2471YPTB2472YPTB2476YPTB2478YPTB2475YPTB2479
YPES386656 YPDSF_1847YPDSF_1846YPDSF_1840YPDSF_1842YPDSF_1841YPDSF_1843YPDSF_1844YPDSF_1851YPDSF_1848YPDSF_1849YPDSF_1853YPDSF_1855YPDSF_1852YPDSF_1856
YPES377628 YPN_2029YPN_2028YPN_2022YPN_2024YPN_2023YPN_2025YPN_2026YPN_2033YPN_2030YPN_2031YPN_2035YPN_2037YPN_2034YPN_2038
YPES360102 YPA_1925YPA_1924YPA_1918YPA_1920YPA_1919YPA_1921YPA_1922YPA_1929YPA_1926YPA_1927YPA_1931YPA_1934YPA_1930YPA_1935
YPES349746 YPANGOLA_A3498YPANGOLA_A3497YPANGOLA_A3491YPANGOLA_A3493YPANGOLA_A3492YPANGOLA_A3494YPANGOLA_A3495YPANGOLA_A3502YPANGOLA_A3499YPANGOLA_A3500YPANGOLA_A3504YPANGOLA_A3506YPANGOLA_A3503YPANGOLA_A3507
YPES214092 YPO1600YPO1601YPO1607YPO1605YPO1606YPO1604YPO1603YPO1596YPO1599YPO1598YPO1594YPO1591YPO1595YPO1590
YPES187410 Y1759Y1760Y1766Y1764Y1765Y1763Y1762Y1755Y1758Y1757Y1752Y1750Y1753Y1749
YENT393305 YE1636YE1637YE1642YE1640YE1641YE1639YE1638YE1632YE1635YE1634YE1630YE1628YE1631YE1627
XAUT78245 XAUT_3132XAUT_3133XAUT_4330XAUT_4325XAUT_4326XAUT_3134XAUT_3581XAUT_4384XAUT_3115XAUT_3116XAUT_4767XAUT_3111XAUT_4668
VVUL216895 VV1_3008VV1_3006VV1_3000VV1_3002VV1_3001VV1_3004VV1_3005VV1_3012VV1_3009VV1_3010VV1_3014VV1_3016VV1_3013VV1_3018
VVUL196600 VV1276VV1277VV1282VV1280VV1281VV1279VV1278VV1272VV1275VV1274VV1270VV1267VV1271VV1266
VPAR223926 VP2053VP2052VP2047VP2049VP2048VP2050VP2051VP2057VP2054VP2055VP2059VP2061VP2058VP2062
VFIS312309 VF1739VF1738VF1733VF1735VF1734VF1736VF1737VF1743VF1740VF1741VF1745VF1747VF1744VF1748
VEIS391735 VEIS_3249VEIS_3248VEIS_1008VEIS_1005VEIS_0511VEIS_1004VEIS_3253VEIS_3250VEIS_3251VEIS_3263VEIS_4787VEIS_3254VEIS_4788
VCHO345073 VC0395_A1606VC0395_A1605VC0395_A1600VC0395_A1602VC0395_A1601VC0395_A1603VC0395_A1604VC0395_A1610VC0395_A1607VC0395_A1608VC0395_A1612VC0395_A1614VC0395_A1611VC0395_A1615
VCHO VC2020VC2019VC2014VC2016VC2015VC2017VC2018VC2024VC2021VC2022VC2026VC2028VC2025VC2030
TTUR377629 TERTU_1721TERTU_1722TERTU_1729TERTU_1725TERTU_1727TERTU_1724TERTU_1723TERTU_1717TERTU_1720TERTU_1718TERTU_1715TERTU_1710TERTU_1716TERTU_1708
TDEN292415 TBD_1548TBD_1547TBD_1540TBD_1543TBD_1542TBD_1544TBD_1545TBD_1552TBD_1549TBD_1550TBD_1554TBD_1563TBD_1553TBD_1564
TCRU317025 TCR_0713TCR_0714TCR_0720TCR_0718TCR_0719TCR_0717TCR_0716TCR_0709TCR_0712TCR_0711TCR_0707TCR_0704TCR_0708TCR_0703
STYP99287 STM1196STM1197STM1202STM1200STM1201STM1199STM1198STM1192STM1195STM1194STM1190STM1187STM1191STM1185
STHE292459 STH1452STH960STH3251STH3258STH13STH1992STH2686STH1447STH1451STH1450STH1243STH426
SSP94122 SHEWANA3_2557SHEWANA3_1769SHEWANA3_1766SHEWANA3_1767SHEWANA3_1765SHEWANA3_1764SHEWANA3_2561SHEWANA3_2558SHEWANA3_2559SHEWANA3_2563SHEWANA3_2566SHEWANA3_2562SHEWANA3_2567
SSP644076 SCH4B_4521SCH4B_4523SCH4B_0497SCH4B_0495SCH4B_4524SCH4B_3252SCH4B_4300SCH4B_4519SCH4B_4518SCH4B_1076SCH4B_4301SCH4B_2179
SSP292414 TM1040_1052TM1040_1054TM1040_3593TM1040_3591TM1040_1055TM1040_2926TM1040_0915TM1040_1051TM1040_1050TM1040_0291TM1040_0916TM1040_1459
SSON300269 SSO_1114SSO_1115SSO_1120SSO_1118SSO_1119SSO_1117SSO_1116SSO_1110SSO_1113SSO_1112SSO_1108SSO_1106SSO_1109SSO_1104
SSED425104 SSED_2623SSED_2622SSED_2645SSED_2648SSED_2647SSED_2649SSED_2650SSED_2627SSED_2624SSED_2625SSED_2629SSED_2633SSED_2628SSED_2634
SPRO399741 SPRO_1907SPRO_1908SPRO_1913SPRO_1911SPRO_1912SPRO_1910SPRO_1909SPRO_1903SPRO_1906SPRO_1905SPRO_1901SPRO_1899SPRO_1902SPRO_1898
SPEA398579 SPEA_2493SPEA_2492SPEA_1926SPEA_1923SPEA_1924SPEA_1922SPEA_1921SPEA_2497SPEA_2494SPEA_2495SPEA_2499SPEA_2503SPEA_2498SPEA_2504
SONE211586 SO_2775SO_2774SO_2610SO_2613SO_2612SO_2614SO_2615SO_2779SO_2776SO_2777SO_2781SO_2784SO_2780SO_2785
SMEL266834 SMC00573SMC00574SMC01193SMC01189SMC00575SMC01047SMC01784SMC00572SMC00571SMC01275SMC03881SMC01336
SMED366394 SMED_0746SMED_0747SMED_1289SMED_1292SMED_1291SMED_0748SMED_1094SMED_0828SMED_0745SMED_0744SMED_1019SMED_3119SMED_0957
SLOI323850 SHEW_1604SHEW_1605SHEW_1582SHEW_1579SHEW_1580SHEW_1578SHEW_1577SHEW_1600SHEW_1603SHEW_1602SHEW_1598SHEW_1594SHEW_1599SHEW_1593
SHIGELLA ACPPFABFYCFHTMKHOLBYCEGPABCPLSXFABGFABDYCEDYCECRPMFRNE
SHAL458817 SHAL_1778SHAL_1779SHAL_2373SHAL_2376SHAL_2375SHAL_2377SHAL_2378SHAL_1774SHAL_1777SHAL_1776SHAL_1772SHAL_1768SHAL_1773SHAL_1767
SGLO343509 SG1061SG1062SG1067SG1065SG1066SG1064SG1063SG1057SG1060SG1059SG1055SG1053SG1056SG1052
SFLE373384 SFV_1114SFV_1115SFV_1120SFV_1118SFV_1119SFV_1117SFV_1116SFV_1110SFV_1113SFV_1112SFV_1109SFV_1107SFV_1106
SFLE198214 AAN42717.1AAN42718.1AAN42723.1AAN42721.1AAN42722.1AAN42720.1AAN42719.1AAN42713.1AAN42716.1AAN42715.1AAN42711.1AAN42709.1AAN42712.1AAN42707.1
SENT454169 SEHA_C1310SEHA_C1311SEHA_C1316SEHA_C1314SEHA_C1315SEHA_C1313SEHA_C1312SEHA_C1306SEHA_C1309SEHA_C1308SEHA_C1304SEHA_C1299SEHA_C1297
SENT321314 SCH_1144SCH_1145SCH_1152SCH_1150SCH_1151SCH_1149SCH_1148SCH_1140SCH_1143SCH_1142SCH_1138SCH_1134SCH_1139SCH_1132
SENT295319 SPA1655SPA1654SPA1649SPA1651SPA1650SPA1652SPA1653SPA1659SPA1656SPA1657SPA1661SPA1664SPA1660SPA1666
SENT220341 STY1235STY1236STY1241STY1239STY1240STY1238STY1237STY1231STY1234STY1233STY1229STY1227STY1230STY1226
SENT209261 T1724T1723T1718T1720T1719T1721T1722T1728T1725T1726T1730T1732T1729T1734
SDYS300267 SDY_2056SDY_2055SDY_2050SDY_2052SDY_2051SDY_2053SDY_2054SDY_2060SDY_2057SDY_2058SDY_2062SDY_2065SDY_2061SDY_2067
SDEN318161 SDEN_2292SDEN_2291SDEN_2048SDEN_2051SDEN_2050SDEN_2052SDEN_2053SDEN_2296SDEN_2293SDEN_2294SDEN_2298SDEN_2301SDEN_2297SDEN_2302
SDEG203122 SDE_1630SDE_1631SDE_1654SDE_1634SDE_1652SDE_1633SDE_1632SDE_1627SDE_1629SDE_1628SDE_1625SDE_1620SDE_1626SDE_1619
SBOY300268 SBO_1969SBO_1968SBO_1963SBO_1965SBO_1964SBO_1966SBO_1967SBO_1973SBO_1970SBO_1971SBO_1975SBO_1977SBO_1974SBO_1980
SBAL402882 SHEW185_1717SHEW185_1718SHEW185_2449SHEW185_2452SHEW185_2451SHEW185_2453SHEW185_2454SHEW185_1713SHEW185_1716SHEW185_1715SHEW185_1711SHEW185_1708SHEW185_1712SHEW185_1707
SBAL399599 SBAL195_1760SBAL195_1761SBAL195_2569SBAL195_2572SBAL195_2571SBAL195_2573SBAL195_2574SBAL195_1756SBAL195_1759SBAL195_1758SBAL195_1754SBAL195_1751SBAL195_1755SBAL195_1750
RSPH349102 RSPH17025_1070RSPH17025_1071RSPH17025_0555RSPH17025_1236RSPH17025_1072RSPH17025_2786RSPH17025_1911RSPH17025_1069RSPH17025_1221RSPH17025_2505RSPH17025_1910RSPH17025_0716
RSPH349101 RSPH17029_1125RSPH17029_1126RSPH17029_2329RSPH17029_2202RSPH17029_1127RSPH17029_3100RSPH17029_1271RSPH17029_1124RSPH17029_1340RSPH17029_0391RSPH17029_1272RSPH17029_0806
RSPH272943 RSP_2463RSP_2464RSP_0675RSP_0551RSP_2465RSP_1215RSP_2613RSP_2461RSP_2682RSP_1745RSP_2614RSP_2131
RSOL267608 RSC1053RSC1054RSC1787RSC1784RSC1783RSC1049RSC1052RSC1051RSC1047RSC1041RSC1048RSC1040
RPAL316058 RPB_2468RPB_2469RPB_2682RPB_2679RPB_2470RPB_2879RPB_2649RPB_2467RPB_2466RPB_2335RPB_0514RPB_3009
RPAL316057 RPD_2978RPD_2977RPD_2718RPD_2715RPD_2976RPD_2593RPD_2685RPD_2979RPD_2983RPD_3129RPD_0311RPD_2442
RPAL316056 RPC_2301RPC_2302RPC_2706RPC_2703RPC_2303RPC_2581RPC_2675RPC_2300RPC_2298RPC_3403RPC_0499RPC_2854
RPAL316055 RPE_3305RPE_3304RPE_2868RPE_2865RPE_3303RPE_2761RPE_2825RPE_3306RPE_3307RPE_3547RPE_0174RPE_2979
RMET266264 RMET_2427RMET_2426RMET_1825RMET_1828RMET_1827RMET_1829RMET_2431RMET_2428RMET_2429RMET_2433RMET_2439RMET_2432RMET_2440
RLEG216596 RL1559RL1560RL2472RL2476RL2475RL1561RL2283RL1638RL1558RL1557RL2567RL4624RL1741
RFER338969 RFER_1733RFER_1734RFER_2258RFER_2255RFER_2256RFER_2254RFER_1729RFER_1732RFER_1731RFER_1727RFER_1721RFER_1728RFER_1720
REUT381666 H16_A2566H16_A2565H16_A1573H16_A1569H16_A1570H16_A1568H16_A2570H16_A2567H16_A2568H16_A2572H16_A2578H16_A2571H16_A2580
REUT264198 REUT_A2262REUT_A2261REUT_A1437REUT_A1434REUT_A1435REUT_A1433REUT_A2266REUT_A2263REUT_A2264REUT_A2268REUT_A2274REUT_A2267REUT_A2275
RETL347834 RHE_CH01444RHE_CH01445RHE_CH02156RHE_CH02160RHE_CH02159RHE_CH01446RHE_CH01953RHE_CH01531RHE_CH01443RHE_CH01442RHE_CH02236RHE_CH04015RHE_CH01645
PSYR223283 PSPTO_3831PSPTO_3830PSPTO_3824PSPTO_3827PSPTO_3826PSPTO_3828PSPTO_3829PSPTO_3834PSPTO_3832PSPTO_3833PSPTO_3836PSPTO_3840PSPTO_3835PSPTO_3841
PSYR205918 PSYR_1648PSYR_1649PSYR_1655PSYR_1652PSYR_1653PSYR_1651PSYR_1650PSYR_1645PSYR_1647PSYR_1646PSYR_1643PSYR_1639PSYR_1644PSYR_1638
PSTU379731 PST_2621PST_2620PST_2614PST_2617PST_2616PST_2618PST_2619PST_2624PST_2622PST_2623PST_2626PST_2630PST_2625PST_2631
PSP56811 PSYCPRWF_0458PSYCPRWF_0208PSYCPRWF_1914PSYCPRWF_0126PSYCPRWF_1391PSYCPRWF_0125PSYCPRWF_0121PSYCPRWF_0457PSYCPRWF_0456PSYCPRWF_0480PSYCPRWF_0455PSYCPRWF_0479
PSP312153 PNUC_0401PNUC_0402PNUC_0964PNUC_0966PNUC_0965PNUC_0967PNUC_0397PNUC_0400PNUC_0399PNUC_0395PNUC_0390PNUC_0396PNUC_0389
PSP296591 BPRO_3646BPRO_3645BPRO_2516BPRO_2518BPRO_2520BPRO_3651BPRO_3647BPRO_3648BPRO_3653BPRO_3659BPRO_3652BPRO_3660
PPUT76869 PPUTGB1_1491PPUTGB1_1492PPUTGB1_1497PPUTGB1_1495PPUTGB1_1496PPUTGB1_1494PPUTGB1_1493PPUTGB1_1488PPUTGB1_1490PPUTGB1_1489PPUTGB1_1486PPUTGB1_1482PPUTGB1_1487PPUTGB1_1481
PPUT351746 PPUT_3799PPUT_3798PPUT_3793PPUT_3795PPUT_3794PPUT_3796PPUT_3797PPUT_3802PPUT_3800PPUT_3801PPUT_3804PPUT_3808PPUT_3803PPUT_3809
PPUT160488 PP_1915PP_1916PP_1967PP_1966PP_1918PP_1917PP_1912PP_1914PP_1913PP_1910PP_1906PP_1911PP_1905
PPRO298386 PBPRA1196PBPRA1197PBPRA1202PBPRA1200PBPRA1201PBPRA1199PBPRA1198PBPRA1192PBPRA1195PBPRA1194PBPRA1190PBPRA1187PBPRA1191PBPRA1186
PNAP365044 PNAP_3071PNAP_3070PNAP_1951PNAP_1670PNAP_1947PNAP_3077PNAP_3072PNAP_3073PNAP_3079PNAP_3085PNAP_3078PNAP_3086
PMUL272843 PM1917PM1675PM1673PM1674PM1672PM1913PM1916PM1915PM1911PM0992PM1912PM0991
PMEN399739 PMEN_1629PMEN_1630PMEN_1636PMEN_1633PMEN_1634PMEN_1632PMEN_1631PMEN_1626PMEN_1628PMEN_1627PMEN_1624PMEN_1620PMEN_1625PMEN_1619
PLUM243265 PLU2832PLU2831PLU2826PLU2828PLU2827PLU2829PLU2830PLU2836PLU2833PLU2834PLU2838PLU2840PLU2837PLU2841
PING357804 PING_1090PING_1091PING_1096PING_1094PING_1095PING_1093PING_1092PING_1086PING_1089PING_1088PING_1084PING_2207PING_1085PING_2208
PHAL326442 PSHAA1807PSHAA1806PSHAA1800PSHAA1803PSHAA1802PSHAA1804PSHAA1805PSHAA1810PSHAA1808PSHAA1809PSHAA1812PSHAA1815PSHAA1811PSHAA1816
PFLU220664 PFL_1797PFL_1798PFL_1803PFL_1801PFL_1802PFL_1800PFL_1799PFL_1794PFL_1796PFL_1795PFL_1792PFL_1788PFL_1793PFL_1787
PFLU216595 PFLU4704PFLU4703PFLU4698PFLU4700PFLU4699PFLU4701PFLU4702PFLU4707PFLU4705PFLU4706PFLU4709PFLU4713PFLU4708PFLU4714
PFLU205922 PFL_4156PFL_4155PFL_4149PFL_4152PFL_4151PFL_4153PFL_4154PFL_4159PFL_4157PFL_4158PFL_4161PFL_4165PFL_4160PFL_4166
PENT384676 PSEEN1620PSEEN1621PSEEN1627PSEEN1624PSEEN1625PSEEN1623PSEEN1622PSEEN1616PSEEN1618PSEEN1617PSEEN1614PSEEN1609PSEEN1615PSEEN1608
PCRY335284 PCRYO_0517PCRYO_2271PCRYO_1532PCRYO_0155PCRYO_1065PCRYO_0154PCRYO_0152PCRYO_0516PCRYO_0515PCRYO_0513PCRYO_0283PCRYO_0514PCRYO_0282
PATL342610 PATL_2121PATL_2120PATL_2115PATL_2117PATL_2116PATL_2118PATL_2119PATL_2125PATL_2122PATL_2123PATL_2127PATL_2133PATL_2126PATL_2134
PARC259536 PSYC_0522PSYC_1972PSYC_0890PSYC_0145PSYC_1313PSYC_0144PSYC_0141PSYC_0521PSYC_0520PSYC_0518PSYC_0257PSYC_0519PSYC_0256
PAER208964 PA2966PA2965PA2959PA2962PA2961PA2963PA2964PA2969PA2967PA2968PA2971PA2975PA2970PA2976
PAER208963 PA14_25670PA14_25690PA14_25780PA14_25740PA14_25760PA14_25730PA14_25710PA14_25640PA14_25660PA14_25650PA14_25620PA14_25580PA14_25630PA14_25560
OCAR504832 OCAR_6367OCAR_6366OCAR_6124OCAR_6127OCAR_6126OCAR_6365OCAR_5218OCAR_5875OCAR_6369OCAR_6370OCAR_5710OCAR_4114OCAR_5985
NWIN323098 NWI_1687NWI_1686NWI_1461NWI_1464NWI_1685NWI_1448NWI_1406NWI_1688NWI_1690NWI_1394NWI_0497NWI_1720
NOCE323261 NOC_1664NOC_1663NOC_1657NOC_1660NOC_1659NOC_1661NOC_1662NOC_1668NOC_1665NOC_1666NOC_1670NOC_2844NOC_1669NOC_2843
NMUL323848 NMUL_A1075NMUL_A1076NMUL_A1381NMUL_A1387NMUL_A1077NMUL_A1071NMUL_A1074NMUL_A1073NMUL_A1069NMUL_A1065NMUL_A1070NMUL_A1064
NMEN374833 NMCC_1925NMCC_1926NMCC_0735NMCC_0623NMCC_0733NMCC_0622NMCC_0307NMCC_0298NMCC_0301NMCC_0310NMCC_1950NMCC_0309NMCC_1952
NMEN272831 NMC0217NMC0216NMC0724NMC0619NMC0722NMC0618NMC0310NMC0302NMC0305NMC0313NMC0190NMC0312NMC0187
NMEN122587 NMA0043NMA0044NMA0982NMA0869NMA0980NMA0868NMA0542NMA0533NMA0536NMA0545NMA0070NMA0544NMA0071
NMEN122586 NMB_0220NMB_0219NMB_0771NMB_0670NMB_0769NMB_0669NMB_1913NMB_1921NMB_1918NMB_1910NMB_0198NMB_1911NMB_0196
NHAM323097 NHAM_2352NHAM_2351NHAM_2007NHAM_2010NHAM_2009NHAM_2350NHAM_1840NHAM_1585NHAM_2353NHAM_2354NHAM_1575NHAM_0625NHAM_1822
NGON242231 NGO1762NGO1763NGO0349NGO0239NGO0347NGO0238NGO2171NGO2163NGO2166NGO2174NGO1783NGO2173NGO1785
NEUT335283 NEUT_0467NEUT_0466NEUT_1285NEUT_0536NEUT_0590NEUT_0465NEUT_0471NEUT_0468NEUT_0469NEUT_0473NEUT_1706NEUT_0472NEUT_1707
NEUR228410 NE1649NE1650NE1516NE2181NE2180NE1651NE1645NE1648NE1647NE1643NE1456NE1644NE1457
NARO279238 SARO_1339SARO_1340SARO_1938SARO_1941SARO_1357SARO_1341SARO_2367SARO_1428SARO_1427SARO_2837SARO_2368SARO_2318
MTHE264732 MOTH_0949MOTH_0950MOTH_0049MOTH_0042MOTH_0043MOTH_1637MOTH_2109MOTH_0944MOTH_0948MOTH_0947MOTH_0869MOTH_0556
MSUC221988 MS1875MS0571MS0569MS0570MS0568MS1870MS1874MS1873MS1868MS1624MS1869MS1622
MSP409 M446_3198M446_3197M446_6467M446_6278M446_3195M446_0051M446_6229M446_3199M446_3200M446_6367M446_5277M446_0393
MSP400668 MMWYL1_2133MMWYL1_2134MMWYL1_2265MMWYL1_2267MMWYL1_2266MMWYL1_2268MMWYL1_2269MMWYL1_2132MMWYL1_2131MMWYL1_2128MMWYL1_2303MMWYL1_2129MMWYL1_2304
MSP266779 MESO_1767MESO_1766MESO_1584MESO_1581MESO_1582MESO_1765MESO_2359MESO_1145MESO_1768MESO_1769MESO_1648MESO_3426MESO_1711
MPET420662 MPE_A0639MPE_A0640MPE_A1857MPE_B0240MPE_A1859MPE_A1861MPE_A0635MPE_A0638MPE_A0637MPE_A0657MPE_A0634MPE_A0656
MLOT266835 MSR7851MLR7852MLL0418MLL0424MLR7854MLR0401MLR8423MLR7850MLR7849MLR0334MSL3782MLL0212
MFLA265072 MFLA_1504MFLA_1503MFLA_1497MFLA_1500MFLA_1499MFLA_1501MFLA_1502MFLA_1508MFLA_1505MFLA_1506MFLA_1510MFLA_1322MFLA_1509MFLA_1321
MEXT419610 MEXT_0558MEXT_0559MEXT_4186MEXT_4191MEXT_0560MEXT_3905MEXT_2053MEXT_0557MEXT_0556MEXT_0278MEXT_3466MEXT_3659
MCAP243233 MCA_2000MCA_1999MCA_1993MCA_1996MCA_1995MCA_1997MCA_1998MCA_2004MCA_2001MCA_2002MCA_2006MCA_1479MCA_2005MCA_1481
MAQU351348 MAQU_1866MAQU_1865MAQU_3661MAQU_1862MAQU_1574MAQU_1863MAQU_1864MAQU_1869MAQU_1867MAQU_1868MAQU_1871MAQU_1875MAQU_1870MAQU_1876
LPNE400673 LPC_0812LPC_0813LPC_0818LPC_0815LPC_0814LPC_2707LPC_0808LPC_0811LPC_0810LPC_1761LPC_0807LPC_1762
LPNE297246 LPP1351LPP1352LPP1357LPP1354LPP1353LPP0645LPP1347LPP1350LPP1349LPP2242LPP1346LPP2244
LPNE297245 LPL1347LPL1348LPL1353LPL1350LPL1349LPL0629LPL1343LPL1346LPL1345LPL2214LPL1342LPL2216
LPNE272624 LPG1396LPG1397LPG1402LPG1399LPG1398LPG0595LPG1392LPG1395LPG1394LPG2295LPG1391LPG2297
LCHO395495 LCHO_0608LCHO_0607LCHO_1881LCHO_1878LCHO_1879LCHO_1877LCHO_1301LCHO_0612LCHO_0609LCHO_0610LCHO_0614LCHO_0591LCHO_0613LCHO_0592
KPNE272620 GKPORF_B0005GKPORF_B0006GKPORF_B0011GKPORF_B0009GKPORF_B0010GKPORF_B0008GKPORF_B0007GKPORF_B5488.42GKPORF_B0004GKPORF_B0003GKPORF_B5488.40GKPORF_B5488.38GKPORF_B5488.41GKPORF_B5488.37
JSP375286 MMA_1359MMA_1360MMA_1982MMA_1986MMA_1985MMA_1987MMA_1355MMA_1358MMA_1357MMA_1353MMA_1347MMA_1354MMA_1346
ILOI283942 IL1339IL1333IL1336IL1335IL1337IL1338IL1343IL1340IL1341IL1345IL1348IL1344IL1349
HHAL349124 HHAL_1232HHAL_0003HHAL_0006HHAL_0007HHAL_0005HHAL_0004HHAL_1236HHAL_1233HHAL_1234HHAL_1238HHAL_1241HHAL_1237HHAL_1242
HDUC233412 HD_1931HD_1936HD_1933HD_1935HD_1932HD_0773HD_0708HD_0707HD_0771HD_0645HD_0772HD_0194
HCHE349521 HCH_02145HCH_02416HCH_02148HCH_02670HCH_02147HCH_02146HCH_02142HCH_02144HCH_02143HCH_02141HCH_02136HCH_10002HCH_02135
ESP42895 ENT638_1609ENT638_1610ENT638_1615ENT638_1613ENT638_1614ENT638_1612ENT638_1611ENT638_1605ENT638_1608ENT638_1607ENT638_1603ENT638_1601ENT638_1604ENT638_1600
EFER585054 EFER_1833EFER_1832EFER_1827EFER_1829EFER_1828EFER_1830EFER_1831EFER_1837EFER_1834EFER_1835EFER_1840EFER_1843EFER_1839EFER_1844
ECOO157 ACPPFABFYCFHTMKHOLBYCEGPABCPLSXFABGFABDYCEDYCECRPMFRNE
ECOL83334 ECS1472ECS1473ECS1478ECS1476ECS1477ECS1475ECS1474ECS1468ECS1471ECS1470ECS1466ECS1464ECS1467ECS1462
ECOL585397 ECED1_1237ECED1_1238ECED1_1243ECED1_1241ECED1_1242ECED1_1240ECED1_1239ECED1_1233ECED1_1236ECED1_1235ECED1_1231ECED1_1229ECED1_1232ECED1_1228
ECOL585057 ECIAI39_2067ECIAI39_2066ECIAI39_2061ECIAI39_2063ECIAI39_2062ECIAI39_2064ECIAI39_2065ECIAI39_2071ECIAI39_2068ECIAI39_2069ECIAI39_2073ECIAI39_2075ECIAI39_2072ECIAI39_2076
ECOL585056 ECUMN_1269ECUMN_1270ECUMN_1277ECUMN_1275ECUMN_1276ECUMN_1274ECUMN_1273ECUMN_1265ECUMN_1268ECUMN_1267ECUMN_1263ECUMN_1261ECUMN_1264ECUMN_1260
ECOL585055 EC55989_1206EC55989_1207EC55989_1212EC55989_1210EC55989_1211EC55989_1209EC55989_1208EC55989_1202EC55989_1205EC55989_1204EC55989_1200EC55989_1198EC55989_1201EC55989_1197
ECOL585035 ECS88_1108ECS88_1109ECS88_1114ECS88_1112ECS88_1113ECS88_1111ECS88_1110ECS88_1104ECS88_1107ECS88_1106ECS88_1101ECS88_1099ECS88_1103ECS88_1098
ECOL585034 ECIAI1_1129ECIAI1_1130ECIAI1_1135ECIAI1_1133ECIAI1_1134ECIAI1_1132ECIAI1_1131ECIAI1_1125ECIAI1_1128ECIAI1_1127ECIAI1_1123ECIAI1_1121ECIAI1_1124ECIAI1_1120
ECOL481805 ECOLC_2507ECOLC_2506ECOLC_2501ECOLC_2503ECOLC_2502ECOLC_2504ECOLC_2505ECOLC_2511ECOLC_2508ECOLC_2509ECOLC_2513ECOLC_2515ECOLC_2512ECOLC_2516
ECOL469008 ECBD_2507ECBD_2506ECBD_2501ECBD_2503ECBD_2502ECBD_2504ECBD_2505ECBD_2511ECBD_2508ECBD_2509ECBD_2513ECBD_2515ECBD_2512ECBD_2516
ECOL439855 ECSMS35_2033ECSMS35_2032ECSMS35_2027ECSMS35_2029ECSMS35_2028ECSMS35_2030ECSMS35_2031ECSMS35_2037ECSMS35_2034ECSMS35_2035ECSMS35_2039ECSMS35_2041ECSMS35_2038ECSMS35_2042
ECOL413997 ECB_01090ECB_01091ECB_01096ECB_01094ECB_01095ECB_01093ECB_01092ECB_01086ECB_01089ECB_01088ECB_01084ECB_01082ECB_01085ECB_01080
ECOL409438 ECSE_1158ECSE_1159ECSE_1164ECSE_1162ECSE_1163ECSE_1161ECSE_1160ECSE_1154ECSE_1157ECSE_1156ECSE_1152ECSE_1149ECSE_1153ECSE_1147
ECOL405955 APECO1_176APECO1_181APECO1_179APECO1_180APECO1_178APECO1_177APECO1_171APECO1_174APECO1_173APECO1_170APECO1_168APECO1_166
ECOL364106 UTI89_C1220UTI89_C1221UTI89_C1227UTI89_C1225UTI89_C1226UTI89_C1224UTI89_C1222UTI89_C1215UTI89_C1218UTI89_C1217UTI89_C1213UTI89_C1211UTI89_C1214UTI89_C1209
ECOL362663 ECP_1086ECP_1087ECP_1092ECP_1090ECP_1091ECP_1089ECP_1088ECP_1082ECP_1085ECP_1084ECP_1080ECP_1078ECP_1081ECP_1076
ECOL331111 ECE24377A_1215ECE24377A_1216ECE24377A_1221ECE24377A_1219ECE24377A_1220ECE24377A_1218ECE24377A_1217ECE24377A_1211ECE24377A_1214ECE24377A_1213ECE24377A_1210ECE24377A_1208ECE24377A_1207
ECOL316407 ECK1080:JW1080:B1094ECK1081:JW1081:B1095ECK1086:JW1086:B1100ECK1084:JW1084:B1098ECK1085:JW1085:B1099ECK1083:JW1083:B1097ECK1082:JW1082:B1096ECK1076:JW5156:B1090ECK1079:JW1079:B1093ECK1078:JW1078:B1092ECK1074:JW1074:B1088ECK1071:JW1072:B1086ECK1075:JW1075:B1089ECK1069:JW1071:B1084
ECOL199310 C1364C1365C1372C1370C1371C1369C1366C1359C1361C1358C1355C1353
ECAR218491 ECA1798ECA1799ECA1804ECA1802ECA1803ECA1801ECA1800ECA1794ECA1797ECA1796ECA1792ECA1790ECA1793ECA1789
DARO159087 DARO_2018DARO_2019DARO_2194DARO_2197DARO_2196DARO_2198DARO_2014DARO_2017DARO_2016DARO_2006DARO_2013DARO_2005
CVIO243365 CV_3413CV_3412CV_3720CV_3723CV_3722CV_3724CV_3410CV_3417CV_3414CV_3415CV_3419CV_1818CV_3418CV_1820
CVES412965 COSY_0520COSY_0521COSY_0077COSY_0214COSY_0213COSY_0447COSY_0822COSY_0823COSY_0449COSY_0078COSY_0448COSY_0406
CSAL290398 CSAL_1602CSAL_1603CSAL_1609CSAL_1606CSAL_1607CSAL_1605CSAL_1604CSAL_1599CSAL_1601CSAL_1600CSAL_1597CSAL_1593CSAL_1598CSAL_1592
CRUT413404 RMAG_0565RMAG_0566RMAG_0071RMAG_0220RMAG_0218RMAG_0484RMAG_0916RMAG_0917RMAG_0486RMAG_0072RMAG_0485RMAG_0436
CPSY167879 CPS_2298CPS_2299CPS_2305CPS_2302CPS_2303CPS_2301CPS_2300CPS_2295CPS_2297CPS_2296CPS_2293CPS_2290CPS_2294CPS_2289
CJAP155077 CJA_1677CJA_1678CJA_1986CJA_1993CJA_1989CJA_1680CJA_1679CJA_1674CJA_1676CJA_1675CJA_1672CJA_1669CJA_1673CJA_1667
CDES477974 DAUD_0643DAUD_0644DAUD_0042DAUD_0036DAUD_0037DAUD_0918DAUD_2032DAUD_0638DAUD_0642DAUD_0641DAUD_0949DAUD_1453
CBUR434922 COXBU7E912_1580COXBU7E912_1579COXBU7E912_1574COXBU7E912_1577COXBU7E912_1576COXBU7E912_1578COXBU7E912_1654COXBU7E912_1584COXBU7E912_1581COXBU7E912_1582COXBU7E912_1589COXBU7E912_1585COXBU7E912_1590
CBUR360115 COXBURSA331_A0605COXBURSA331_A0606COXBURSA331_A0611COXBURSA331_A0608COXBURSA331_A0609COXBURSA331_A0607COXBURSA331_A0525COXBURSA331_A0601COXBURSA331_A0604COXBURSA331_A0603COXBURSA331_A0596COXBURSA331_A0600COXBURSA331_A0595
CBUR227377 CBU_0496CBU_0497CBU_0502CBU_0499CBU_0500CBU_0498CBU_0418CBU_0492CBU_0495CBU_0494CBU_0487CBU_0491CBU_0486
BVIE269482 BCEP1808_1043BCEP1808_1044BCEP1808_1815BCEP1808_1817BCEP1808_1816BCEP1808_1818BCEP1808_1039BCEP1808_1042BCEP1808_1041BCEP1808_1037BCEP1808_1031BCEP1808_1038BCEP1808_1030
BTHA271848 BTH_I1720BTH_I1721BTH_I2157BTH_I2154BTH_I2155BTH_I2153BTH_II0567BTH_I1716BTH_I1719BTH_I1718BTH_I1714BTH_I1708BTH_I1715BTH_I1707
BSUI470137 BSUIS_A0485BSUIS_A0487BSUIS_A1040BSUIS_A1036BSUIS_A0488BSUIS_B0927BSUIS_A0810BSUIS_A0484BSUIS_A0483BSUIS_A1043BSUIS_B1251BSUIS_A0953
BSUI204722 BR_0459BR_0461BR_0996BR_0992BR_0462BR_A0934BR_0776BR_0458BR_0457BR_1000BR_1775BR_0912
BSP376 BRADO3313BRADO3314BRADO3830BRADO3827BRADO3315BRADO6144BRADO4418BRADO3311BRADO3310BRADO4632BRADO0557BRADO3511
BSP36773 BCEP18194_A4236BCEP18194_A4237BCEP18194_A5191BCEP18194_A5193BCEP18194_A5192BCEP18194_A5194BCEP18194_A4232BCEP18194_A4235BCEP18194_A4234BCEP18194_A4230BCEP18194_A4224BCEP18194_A4231BCEP18194_A4223
BPSE320373 BURPS668_2789BURPS668_2788BURPS668_2278BURPS668_2281BURPS668_2280BURPS668_2282BURPS668_A2593BURPS668_2793BURPS668_2790BURPS668_2791BURPS668_2795BURPS668_2801BURPS668_2794BURPS668_2802
BPSE272560 BPSL2439BPSL2438BPSL1439BPSL1436BPSL1437BPSL1435BPSS1810BPSL2443BPSL2440BPSL2441BPSL2445BPSL2451BPSL2444BPSL2452
BPET94624 BPET1756BPET1757BPET2502BPET2504BPET3553BPET2505BPET4806BPET1752BPET1755BPET1754BPET1750BPET1743BPET1751BPET1742
BPER257313 BP2440BP2439BP1849BP1847BP1549BP1846BP0769BP2444BP2441BP2442BP2446BP0477BP2445BP0475
BPAR257311 BPP3304BPP3303BPP1561BPP1559BPP1221BPP1558BPP0330BPP3308BPP3305BPP3306BPP3310BPP3317BPP3309BPP3318
BOVI236 GBOORF0488GBOORF0489GBOORF0992GBOORF0989GBOORF0490GBOORFA0963GBOORF0801GBOORF0487GBOORF0486GBOORF0995GBOORF1779GBOORF0939
BMEL359391 BAB1_0484BAB1_0486BAB1_1015BAB1_1011BAB1_0487BAB2_0301BAB1_0797BAB1_0483BAB1_0482BAB1_1019BAB1_1785BAB1_0930
BMEL224914 BMEI1475BMEI1473BMEI0986BMEI0989BMEI1471BMEII0363BMEI1181BMEI1477BMEI1478BMEI0983BMEI0272BMEI1057
BMAL320389 BMA10247_1799BMA10247_1798BMA10247_1186BMA10247_1189BMA10247_1188BMA10247_1190BMA10247_1803BMA10247_1800BMA10247_1801BMA10247_1806BMA10247_1813BMA10247_1805BMA10247_1814
BMAL320388 BMASAVP1_A2476BMASAVP1_A2475BMASAVP1_A1913BMASAVP1_A1916BMASAVP1_A1915BMASAVP1_A1917BMASAVP1_A2480BMASAVP1_A2477BMASAVP1_A2478BMASAVP1_A2483BMASAVP1_A2490BMASAVP1_A2482BMASAVP1_A2491
BMAL243160 BMA_0533BMA_0534BMA_1422BMA_1425BMA_1424BMA_1426BMA_0529BMA_0532BMA_0531BMA_0527BMA_0521BMA_0528BMA_0520
BJAP224911 BSR4084BLR4085BLL4515BLL4518BLR4086BLL7596BLL5021BLR4083BLR4082BLL5366BSR0948BLL4305
BCEN331272 BCEN2424_1124BCEN2424_1125BCEN2424_1891BCEN2424_1893BCEN2424_1892BCEN2424_1894BCEN2424_1120BCEN2424_1123BCEN2424_1122BCEN2424_1118BCEN2424_1112BCEN2424_1119BCEN2424_1110
BCEN331271 BCEN_0644BCEN_0645BCEN_6188BCEN_6186BCEN_6187BCEN_6185BCEN_0640BCEN_0643BCEN_0642BCEN_0638BCEN_0632BCEN_0639BCEN_0631
BCAN483179 BCAN_A0464BCAN_A0466BCAN_A1013BCAN_A1009BCAN_A0467BCAN_B0954BCAN_A0788BCAN_A0463BCAN_A0462BCAN_A1016BCAN_A1813BCAN_A0925
BBRO257310 BB3755BB3754BB2639BB2637BB1438BB2636BB0333BB3759BB3756BB3757BB3761BB3768BB3760BB3769
BAMB398577 BAMMC406_1004BAMMC406_1005BAMMC406_1800BAMMC406_1802BAMMC406_1801BAMMC406_1803BAMMC406_1000BAMMC406_1003BAMMC406_1002BAMMC406_0998BAMMC406_0992BAMMC406_0999BAMMC406_0991
BAMB339670 BAMB_1000BAMB_1001BAMB_1828BAMB_1830BAMB_1829BAMB_1831BAMB_0996BAMB_0999BAMB_0998BAMB_0994BAMB_0988BAMB_0995BAMB_0986
BABO262698 BRUAB1_0481BRUAB1_0483BRUAB1_1002BRUAB1_0998BRUAB1_0484BRUAB2_0299BRUAB1_0791BRUAB1_0480BRUAB1_0479BRUAB1_1005BRUAB1_1758BRUAB1_0923
ASP76114 EBD12EBA5459EBA5421EBA5415EBA5417EBA5414EBA5454EBA5457EBA5456EBA5452EBA5443EBC5EBA5441
ASP62928 AZO1626AZO1627AZO1598AZO1595AZO1596AZO1594AZO1622AZO1625AZO1624AZO1620AZO1614AZO1621AZO1613
ASP232721 AJS_3277AJS_3276AJS_1720AJS_1717AJS_2350AJS_1716AJS_3281AJS_3278AJS_3279AJS_3283AJS_1163AJS_3282AJS_3290
ASAL382245 ASA_2053ASA_2052ASA_2047ASA_2049ASA_2048ASA_2050ASA_2051ASA_2057ASA_2054ASA_2055ASA_2059ASA_2062ASA_2058ASA_2064
APLE434271 APJL_1855APJL_1846APJL_1853APJL_1852APJL_1854APJL_1403APJL_2040APJL_2041APJL_1405APJL_1921APJL_1404APJL_1468
APLE416269 APL_1819APL_1810APL_1817APL_1816APL_1818APL_1385APL_1992APL_1993APL_1387APL_1877APL_1386APL_1436
AHYD196024 AHA_2252AHA_2253AHA_2258AHA_2256AHA_2257AHA_2255AHA_2254AHA_2248AHA_2251AHA_2250AHA_2246AHA_2240AHA_2247AHA_2239
AFER243159 AFE_1178AFE_1177AFE_2055AFE_1174AFE_1173AFE_1176AFE_1182AFE_1179AFE_1180AFE_0879AFE_1183AFE_0878
AEHR187272 MLG_1420MLG_1419MLG_1416MLG_1415MLG_1417MLG_1418MLG_1424MLG_1421MLG_1422MLG_1426MLG_1429MLG_1425MLG_1430
ACAU438753 AZC_4314AZC_4315AZC_2178AZC_2173AZC_4316AZC_1597AZC_2295AZC_4313AZC_4312AZC_2524AZC_0310AZC_3627
ABOR393595 ABO_1070ABO_1071ABO_1077ABO_1074ABO_1075ABO_1073ABO_1072ABO_1067ABO_1069ABO_1068ABO_1065ABO_1061ABO_1066ABO_1060
ABAU360910 BAV1122BAV1123BAV1766BAV1764BAV0914BAV1763BAV1118BAV1121BAV1120BAV1116BAV1109BAV1117BAV1108
AAVE397945 AAVE_1186AAVE_1187AAVE_3409AAVE_3412AAVE_3411AAVE_3413AAVE_1182AAVE_1185AAVE_1184AAVE_1180AAVE_1174AAVE_1181AAVE_1173


Organism features enriched in list (features available for 183 out of the 194 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00247431892
Arrangment:Pairs 0.004712346112
Disease:Brucellosis 0.002933955
Disease:Bubonic_plague 0.000903566
Disease:Dysentery 0.000903566
Disease:Gastroenteritis 0.00075851013
Disease:Legionnaire's_disease 0.009490344
Disease:Meningitis_and_septicemia 0.009490344
Endospores:No 3.369e-1132211
Endospores:Yes 1.847e-8153
GC_Content_Range4:0-40 8.974e-329213
GC_Content_Range4:40-60 1.588e-10105224
GC_Content_Range4:60-100 1.030e-669145
GC_Content_Range7:30-40 7.557e-219166
GC_Content_Range7:50-60 1.759e-1062107
GC_Content_Range7:60-70 1.526e-869134
Genome_Size_Range5:0-2 5.988e-263155
Genome_Size_Range5:2-4 0.000805746197
Genome_Size_Range5:4-6 7.141e-20106184
Genome_Size_Range5:6-10 0.00002182847
Genome_Size_Range9:0-1 0.0003795127
Genome_Size_Range9:1-2 1.660e-212128
Genome_Size_Range9:2-3 0.000780624120
Genome_Size_Range9:4-5 1.925e-85496
Genome_Size_Range9:5-6 3.487e-95288
Genome_Size_Range9:6-8 1.093e-62638
Gram_Stain:Gram_Neg 5.909e-32166333
Gram_Stain:Gram_Pos 8.097e-253150
Habitat:Multiple 0.000184774178
Habitat:Specialized 0.0027150853
Motility:No 2.367e-1314151
Motility:Yes 4.296e-12122267
Optimal_temp.:- 0.009078592257
Optimal_temp.:25-30 0.00291251219
Optimal_temp.:35-37 0.0043263913
Oxygen_Req:Anaerobic 1.183e-125102
Oxygen_Req:Facultative 1.853e-995201
Shape:Coccobacillus 0.00006001011
Shape:Coccus 0.00001121082
Shape:Rod 2.984e-12146347
Shape:Spiral 0.0002385234
Temp._range:Psychrophilic 0.000530289
Temp._range:Thermophilic 0.0009176335



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ORGANISMS CONTAINING AT MOST 2 GENES FROM THE GROUP:

Total number of orgs: 106
Effective number of orgs (counting one per cluster within 468 clusters): 91

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/271
TWHI203267 ncbi Tropheryma whipplei Twist1
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSOL273057 ncbi Sulfolobus solfataricus P20
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSP101510 ncbi Rhodococcus jostii RHA11
PTOR263820 ncbi Picrophilus torridus DSM 97900
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE51
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NFAR247156 ncbi Nocardia farcinica IFM 101521
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 531
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS1
MSP164757 ncbi Mycobacterium sp. JLS1
MSP164756 ncbi Mycobacterium sp. MCS1
MSME246196 ncbi Mycobacterium smegmatis MC2 1552
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1291
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S21
MLEP272631 ncbi Mycobacterium leprae TN1
MLAB410358 ncbi Methanocorpusculum labreanum Z1
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G371
MFLO265311 ncbi Mesoplasma florum L12
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-31
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
KRAD266940 ncbi Kineococcus radiotolerans SRS302162
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J992
HPYL357544 ncbi Helicobacter pylori HPAG12
HPY ncbi Helicobacter pylori 266952
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba2
FSP106370 ncbi Frankia sp. CcI32
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS1
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEI306537 ncbi Corynebacterium jeikeium K4112
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3812
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi1
BBUR224326 ncbi Borrelia burgdorferi B311
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.2
APER272557 ncbi Aeropyrum pernix K10
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
AAUR290340 ncbi Arthrobacter aurescens TC12


Names of the homologs of the genes in the group in each of these orgs
  EG50003   EG12606   EG12303   EG12302   EG11500   EG11494   EG11493   EG11437   EG11318   EG11317   EG11119   EG11118   EG10890   EG10859   
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX558
TWHI218496 TW0373
TWHI203267 TW374
TVOL273116
TPEN368408
TPAL243276 TP_0491
TKOD69014
TDEN243275 TDE_1543
TACI273075
STOK273063
SSOL273057
SMAR399550
SACI330779
RSP101510 RHA1_RO01314
PTOR263820
PISL384616
PHOR70601
PFUR186497 PF1730
PAST100379
PARS340102
PAER178306
PABY272844 PAB0319
NPHA348780 NP0798A
NFAR247156 NFA13520
MVAN350058 MVAN_5394
MTUB419947 MRA_3679
MTUB336982 TBFG_13673
MTHE349307 MTHE_1306
MTHE187420
MTBRV RV3644C
MTBCDC MT3747
MSYN262723 MS53_0052
MSTA339860
MSP189918 MKMS_4880
MSP164757 MJLS_5180
MSP164756 MMCS_4794
MSME246196 MSMEG_6153MSMEG_3150
MSED399549
MPUL272635
MPNE272634 MPN540
MPEN272633
MMYC272632 MSC_0046
MMOB267748
MMAZ192952 MM1045
MMAR444158 MMARC6_0820
MMAR426368 MMARC7_1131
MMAR402880 MMARC5_1546
MMAR368407 MEMAR_1735
MMAR267377 MMP0132
MLEP272631 ML0202
MLAB410358 MLAB_0476
MKAN190192 MK1627
MJAN243232 MJ_1008
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_0672
MGIL350054 MFLV_1396
MGEN243273 MG_363
MFLO265311 MFL676MFL230
MCAP340047 MCAP_0010
MBUR259564 MBUR_1543
MBOV410289 BCG_3702C
MBOV233413 MB3668C
MBAR269797 MBAR_A0576
MAVI243243
MART243272
MAEO419665 MAEO_1195
MACE188937 MA4349
MABS561007 MAB_0491
KRAD266940 KRAD_0489KRAD_3030
IHOS453591
HWAL362976 HQ1247A
HSP64091 VNG0387G
HSAL478009 OE1574F
HPYL85963 JHP0505JHP0187
HPYL357544 HPAG1_0536HPAG1_0195
HPY HP0558HP0201
HMUK485914 HMUK_2928
HMAR272569 RRNAC0711
HBUT415426
HACI382638 HAC_0779HAC_0386
FSP106370 FRANCCI3_3212FRANCCI3_1218
CSUL444179 SMGWSS_016
CMET456442 MBOO_1421
CMAQ397948
CKOR374847
CJEI306537 JK1951JK1873
CHOM360107 CHAB381_0229CHAB381_1491
BXEN266265
BTUR314724
BLON206672 BL0484
BHER314723
BGAR290434 BG0732
BBUR224326 BB_0709
BAFZ390236 BAPKO_0754
AYEL322098
AURANTIMONAS
ASP1667 ARTH_0717ARTH_2393
APER272557
ALAI441768 ACL_1402
AFUL224325 AF_0933
AAUR290340 AAUR_0888AAUR_2369


Organism features enriched in list (features available for 101 out of the 106 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.008730259
Arrangment:Chains 0.0000525492
Arrangment:Pairs 0.00041108112
Arrangment:Singles 0.000023568286
Disease:Tuberculosis 0.005072133
Endospores:No 1.643e-2179211
Endospores:Yes 0.0003060153
GC_Content_Range7:0-30 0.00001452047
Genome_Size_Range5:0-2 1.287e-1054155
Genome_Size_Range5:2-4 0.003088223197
Genome_Size_Range5:4-6 0.000333518184
Genome_Size_Range9:0-1 5.706e-91827
Genome_Size_Range9:1-2 0.000213636128
Genome_Size_Range9:3-4 0.0022502577
Genome_Size_Range9:5-6 0.0093749888
Gram_Stain:Gram_Neg 6.284e-1424333
Habitat:Multiple 3.197e-711178
Habitat:Specialized 0.00011202053
Motility:No 0.000026343151
Optimal_temp.:- 0.000016126257
Optimal_temp.:100 0.005072133
Optimal_temp.:35-40 0.005072133
Optimal_temp.:37 0.000125432106
Optimal_temp.:85 0.000857044
Oxygen_Req:Anaerobic 2.004e-635102
Oxygen_Req:Facultative 0.000465921201
Pathogenic_in:Animal 0.0034974466
Pathogenic_in:Human 0.007014227213
Salinity:Extreme_halophilic 0.002096057
Salinity:Non-halophilic 0.001602629106
Shape:Irregular_coccus 1.495e-101517
Shape:Pleomorphic 0.004657758
Shape:Rod 1.422e-933347
Shape:Sphere 1.375e-101619
Temp._range:Hyperthermophilic 1.328e-91723
Temp._range:Mesophilic 0.000634070473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 77
Effective number of orgs (counting one per cluster within 468 clusters): 61

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA 6.931e-673212
TCRU317025 ncbi Thiomicrospira crunogena XCL-2 8.647e-6130014
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 9.973e-675512
CBUR360115 ncbi Coxiella burnetii RSA 331 0.000010799713
CBUR227377 ncbi Coxiella burnetii RSA 493 0.0000127101113
NOCE323261 ncbi Nitrosococcus oceani ATCC 19707 0.0000185137214
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-111 0.0000215105313
CBLO203907 ncbi Candidatus Blochmannia floridanus 0.000046765611
MFLA265072 ncbi Methylobacillus flagellatus KT 0.0000659150214
TDEN292415 ncbi Thiobacillus denitrificans ATCC 25259 0.0000685150614
MCAP243233 ncbi Methylococcus capsulatus Bath 0.0000704150914
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN 0.000082469211
NGON242231 ncbi Neisseria gonorrhoeae FA 1090 0.0001028119013
NMEN374833 ncbi Neisseria meningitidis 053442 0.0001368121713
ABOR393595 ncbi Alcanivorax borkumensis SK2 0.0001468159014
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1 0.0001472122413
NMEN122586 ncbi Neisseria meningitidis MC58 0.0001535122813
NMEN272831 ncbi Neisseria meningitidis FAM18 0.0001650123513
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C 0.000167596112
NMEN122587 ncbi Neisseria meningitidis Z2491 0.0001905124913
SDEG203122 ncbi Saccharophagus degradans 2-40 0.0002952167114
NEUR228410 ncbi Nitrosomonas europaea ATCC 19718 0.0003267130313
TTUR377629 ncbi Teredinibacter turnerae T7901 0.0003461169014
NEUT335283 ncbi Nitrosomonas eutropha C91 0.0003464130913
PARC259536 ncbi Psychrobacter arcticus 273-4 0.0003566131213
CJAP155077 Cellvibrio japonicus 0.0004468172114
NHAM323097 ncbi Nitrobacter hamburgensis X14 0.0004621133913
BPER257313 ncbi Bordetella pertussis Tohama I 0.0005881175514
HHAL349124 ncbi Halorhodospira halophila SL1 0.0006779138013
OCAR504832 ncbi Oligotropha carboxidovorans OM5 0.0008748140813
BCIC186490 Candidatus Baumannia cicadellinicola 0.001036367510
LCHO395495 ncbi Leptothrix cholodnii SP-6 0.0011696184314
SRUB309807 ncbi Salinibacter ruber DSM 13855 0.001319690011
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC125 0.0013509186214
PCRY335284 ncbi Psychrobacter cryohalolentis K5 0.0013975146113
MAQU351348 ncbi Marinobacter aquaeolei VT8 0.0017162189414
BPAR257311 ncbi Bordetella parapertussis 12822 0.0017162189414
NWIN323098 ncbi Nitrobacter winogradskyi Nb-255 0.0017624117812
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-00 0.001797092711
FTUL393011 ncbi Francisella tularensis holarctica OSU18 0.001817492811
BQUI283165 ncbi Bartonella quintana Toulouse 0.001836871710
DNOD246195 ncbi Dichelobacter nodosus VCS1703A 0.002294894911
FRANT ncbi Francisella tularensis tularensis SCHU S4 0.002423995411
FTUL393115 ncbi Francisella tularensis tularensis FSC198 0.002531895811
FTUL351581 Francisella tularensis holarctica FSC200 0.002531895811
SDEN318161 ncbi Shewanella denitrificans OS217 0.0025658194914
SGLO343509 ncbi Sodalis glossinidius morsitans 0.0027968196114
CPSY167879 ncbi Colwellia psychrerythraea 34H 0.0028780196514
FTUL418136 ncbi Francisella tularensis tularensis WY96-3418 0.003040097511
BBRO257310 ncbi Bordetella bronchiseptica RB50 0.0030688197414
RAKA293614 ncbi Rickettsia akari Hartford 0.00307694168
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith 0.00307694168
PATL342610 ncbi Pseudoalteromonas atlantica T6c 0.0034373199014
RRIC452659 ncbi Rickettsia rickettsii Iowa 0.00355584248
NARO279238 ncbi Novosphingobium aromaticivorans DSM 12444 0.0036741125612
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-1 0.0041704159313
BHEN283166 ncbi Bartonella henselae Houston-1 0.004263378410
BPET94624 Bordetella petrii 0.0043305202314
BTRI382640 ncbi Bartonella tribocorum CIP 105476 0.004689479210
ILOI283942 ncbi Idiomarina loihiensis L2TR 0.0050356161713
PING357804 ncbi Psychromonas ingrahamii 37 0.0051458204814
MSP266779 ncbi Chelativorans sp. BNC1 0.0052354162213
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 23270 0.0053958129912
XAUT78245 ncbi Xanthobacter autotrophicus Py2 0.0055272162913
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum) 0.00616416219
MTHE264732 ncbi Moorella thermoacetica ATCC 39073 0.0065902132212
FTUL401614 ncbi Francisella novicida U112 0.0068128105411
CSAL290398 ncbi Chromohalobacter salexigens DSM 3043 0.0069827209314
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 1 0.0076216133912
SLOI323850 ncbi Shewanella loihica PV-4 0.0080872211514
WPIP80849 Wolbachia endosymbiont of Brugia malayi 0.00840583337
LPNE297245 ncbi Legionella pneumophila Lens 0.0085782135312
PSTU379731 ncbi Pseudomonas stutzeri A1501 0.0085841212414
HDUC233412 ncbi Haemophilus ducreyi 35000HP 0.0087968135612
LPNE400673 ncbi Legionella pneumophila Corby 0.0089454135812
LPNE297246 ncbi Legionella pneumophila Paris 0.0092492136212
ELIT314225 ncbi Erythrobacter litoralis HTCC2594 0.0097214109111


Names of the homologs of the genes in the group in each of these orgs
  EG50003   EG12606   EG12303   EG12302   EG11500   EG11494   EG11493   EG11437   EG11318   EG11317   EG11119   EG11118   EG10890   EG10859   
CVES412965 COSY_0520COSY_0521COSY_0077COSY_0214COSY_0213COSY_0447COSY_0822COSY_0823COSY_0449COSY_0078COSY_0448COSY_0406
TCRU317025 TCR_0713TCR_0714TCR_0720TCR_0718TCR_0719TCR_0717TCR_0716TCR_0709TCR_0712TCR_0711TCR_0707TCR_0704TCR_0708TCR_0703
CRUT413404 RMAG_0565RMAG_0566RMAG_0071RMAG_0220RMAG_0218RMAG_0484RMAG_0916RMAG_0917RMAG_0486RMAG_0072RMAG_0485RMAG_0436
CBUR360115 COXBURSA331_A0605COXBURSA331_A0606COXBURSA331_A0611COXBURSA331_A0608COXBURSA331_A0609COXBURSA331_A0607COXBURSA331_A0525COXBURSA331_A0601COXBURSA331_A0604COXBURSA331_A0603COXBURSA331_A0596COXBURSA331_A0600COXBURSA331_A0595
CBUR227377 CBU_0496CBU_0497CBU_0502CBU_0499CBU_0500CBU_0498CBU_0418CBU_0492CBU_0495CBU_0494CBU_0487CBU_0491CBU_0486
NOCE323261 NOC_1664NOC_1663NOC_1657NOC_1660NOC_1659NOC_1661NOC_1662NOC_1668NOC_1665NOC_1666NOC_1670NOC_2844NOC_1669NOC_2843
CBUR434922 COXBU7E912_1580COXBU7E912_1579COXBU7E912_1574COXBU7E912_1577COXBU7E912_1576COXBU7E912_1578COXBU7E912_1654COXBU7E912_1584COXBU7E912_1581COXBU7E912_1582COXBU7E912_1589COXBU7E912_1585COXBU7E912_1590
CBLO203907 BFL403BFL399BFL401BFL400BFL402BFL407BFL404BFL405BFL409BFL408BFL410
MFLA265072 MFLA_1504MFLA_1503MFLA_1497MFLA_1500MFLA_1499MFLA_1501MFLA_1502MFLA_1508MFLA_1505MFLA_1506MFLA_1510MFLA_1322MFLA_1509MFLA_1321
TDEN292415 TBD_1548TBD_1547TBD_1540TBD_1543TBD_1542TBD_1544TBD_1545TBD_1552TBD_1549TBD_1550TBD_1554TBD_1563TBD_1553TBD_1564
MCAP243233 MCA_2000MCA_1999MCA_1993MCA_1996MCA_1995MCA_1997MCA_1998MCA_2004MCA_2001MCA_2002MCA_2006MCA_1479MCA_2005MCA_1481
CBLO291272 BPEN_415BPEN_411BPEN_413BPEN_412BPEN_414BPEN_419BPEN_416BPEN_417BPEN_421BPEN_420BPEN_422
NGON242231 NGO1762NGO1763NGO0349NGO0239NGO0347NGO0238NGO2171NGO2163NGO2166NGO2174NGO1783NGO2173NGO1785
NMEN374833 NMCC_1925NMCC_1926NMCC_0735NMCC_0623NMCC_0733NMCC_0622NMCC_0307NMCC_0298NMCC_0301NMCC_0310NMCC_1950NMCC_0309NMCC_1952
ABOR393595 ABO_1070ABO_1071ABO_1077ABO_1074ABO_1075ABO_1073ABO_1072ABO_1067ABO_1069ABO_1068ABO_1065ABO_1061ABO_1066ABO_1060
PSP312153 PNUC_0401PNUC_0402PNUC_0964PNUC_0966PNUC_0965PNUC_0967PNUC_0397PNUC_0400PNUC_0399PNUC_0395PNUC_0390PNUC_0396PNUC_0389
NMEN122586 NMB_0220NMB_0219NMB_0771NMB_0670NMB_0769NMB_0669NMB_1913NMB_1921NMB_1918NMB_1910NMB_0198NMB_1911NMB_0196
NMEN272831 NMC0217NMC0216NMC0724NMC0619NMC0722NMC0618NMC0310NMC0302NMC0305NMC0313NMC0190NMC0312NMC0187
CDES477974 DAUD_0643DAUD_0644DAUD_0042DAUD_0036DAUD_0037DAUD_0918DAUD_2032DAUD_0638DAUD_0642DAUD_0641DAUD_0949DAUD_1453
NMEN122587 NMA0043NMA0044NMA0982NMA0869NMA0980NMA0868NMA0542NMA0533NMA0536NMA0545NMA0070NMA0544NMA0071
SDEG203122 SDE_1630SDE_1631SDE_1654SDE_1634SDE_1652SDE_1633SDE_1632SDE_1627SDE_1629SDE_1628SDE_1625SDE_1620SDE_1626SDE_1619
NEUR228410 NE1649NE1650NE1516NE2181NE2180NE1651NE1645NE1648NE1647NE1643NE1456NE1644NE1457
TTUR377629 TERTU_1721TERTU_1722TERTU_1729TERTU_1725TERTU_1727TERTU_1724TERTU_1723TERTU_1717TERTU_1720TERTU_1718TERTU_1715TERTU_1710TERTU_1716TERTU_1708
NEUT335283 NEUT_0467NEUT_0466NEUT_1285NEUT_0536NEUT_0590NEUT_0465NEUT_0471NEUT_0468NEUT_0469NEUT_0473NEUT_1706NEUT_0472NEUT_1707
PARC259536 PSYC_0522PSYC_1972PSYC_0890PSYC_0145PSYC_1313PSYC_0144PSYC_0141PSYC_0521PSYC_0520PSYC_0518PSYC_0257PSYC_0519PSYC_0256
CJAP155077 CJA_1677CJA_1678CJA_1986CJA_1993CJA_1989CJA_1680CJA_1679CJA_1674CJA_1676CJA_1675CJA_1672CJA_1669CJA_1673CJA_1667
NHAM323097 NHAM_2352NHAM_2351NHAM_2007NHAM_2010NHAM_2009NHAM_2350NHAM_1840NHAM_1585NHAM_2353NHAM_2354NHAM_1575NHAM_0625NHAM_1822
BPER257313 BP2440BP2439BP1849BP1847BP1549BP1846BP0769BP2444BP2441BP2442BP2446BP0477BP2445BP0475
HHAL349124 HHAL_1232HHAL_0003HHAL_0006HHAL_0007HHAL_0005HHAL_0004HHAL_1236HHAL_1233HHAL_1234HHAL_1238HHAL_1241HHAL_1237HHAL_1242
OCAR504832 OCAR_6367OCAR_6366OCAR_6124OCAR_6127OCAR_6126OCAR_6365OCAR_5218OCAR_5875OCAR_6369OCAR_6370OCAR_5710OCAR_4114OCAR_5985
BCIC186490 BCI_0433BCI_0429BCI_0431BCI_0430BCI_0432BCI_0434BCI_0435BCI_0439BCI_0438BCI_0440
LCHO395495 LCHO_0608LCHO_0607LCHO_1881LCHO_1878LCHO_1879LCHO_1877LCHO_1301LCHO_0612LCHO_0609LCHO_0610LCHO_0614LCHO_0591LCHO_0613LCHO_0592
SRUB309807 SRU_2754SRU_2753SRU_1299SRU_2701SRU_0857SRU_2544SRU_2317SRU_0041SRU_0045SRU_0043SRU_1189
PHAL326442 PSHAA1807PSHAA1806PSHAA1800PSHAA1803PSHAA1802PSHAA1804PSHAA1805PSHAA1810PSHAA1808PSHAA1809PSHAA1812PSHAA1815PSHAA1811PSHAA1816
PCRY335284 PCRYO_0517PCRYO_2271PCRYO_1532PCRYO_0155PCRYO_1065PCRYO_0154PCRYO_0152PCRYO_0516PCRYO_0515PCRYO_0513PCRYO_0283PCRYO_0514PCRYO_0282
MAQU351348 MAQU_1866MAQU_1865MAQU_3661MAQU_1862MAQU_1574MAQU_1863MAQU_1864MAQU_1869MAQU_1867MAQU_1868MAQU_1871MAQU_1875MAQU_1870MAQU_1876
BPAR257311 BPP3304BPP3303BPP1561BPP1559BPP1221BPP1558BPP0330BPP3308BPP3305BPP3306BPP3310BPP3317BPP3309BPP3318
NWIN323098 NWI_1687NWI_1686NWI_1461NWI_1464NWI_1685NWI_1448NWI_1406NWI_1688NWI_1690NWI_1394NWI_0497NWI_1720
FTUL458234 FTA_1201FTA_1200FTA_0653FTA_1757FTA_1205FTA_1202FTA_1203FTA_1207FTA_1911FTA_1206FTA_0757
FTUL393011 FTH_1113FTH_1112FTH_0623FTH_1601FTH_1117FTH_1114FTH_1115FTH_1119FTH_1741FTH_1118FTH_0719
BQUI283165 BQ04540BQ04550BQ06080BQ04560BQ05470BQ04530BQ04520BQ07920BQ12160BQ05870
DNOD246195 DNO_1210DNO_1211DNO_1213DNO_1212DNO_1206DNO_1209DNO_1208DNO_1204DNO_1001DNO_1205DNO_0302
FRANT ACPPFABFFT.1441CTMKPLSXFABGFT.1376FT.1372RLUCRMPFRNE
FTUL393115 FTF1376FTF1377FTF1439CFTF0117FTF1372FTF1375FTF1374FTF1370FTF0055FTF1371FTF1227
FTUL351581 FTL_1138FTL_1137FTL_0620FTL_1660FTL_1142FTL_1139FTL_1140FTL_1144FTL_1804FTL_1143FTL_0717
SDEN318161 SDEN_2292SDEN_2291SDEN_2048SDEN_2051SDEN_2050SDEN_2052SDEN_2053SDEN_2296SDEN_2293SDEN_2294SDEN_2298SDEN_2301SDEN_2297SDEN_2302
SGLO343509 SG1061SG1062SG1067SG1065SG1066SG1064SG1063SG1057SG1060SG1059SG1055SG1053SG1056SG1052
CPSY167879 CPS_2298CPS_2299CPS_2305CPS_2302CPS_2303CPS_2301CPS_2300CPS_2295CPS_2297CPS_2296CPS_2293CPS_2290CPS_2294CPS_2289
FTUL418136 FTW_0515FTW_0514FTW_0442FTW_0202FTW_0519FTW_0516FTW_0517FTW_0521FTW_0131FTW_0520FTW_0719
BBRO257310 BB3755BB3754BB2639BB2637BB1438BB2636BB0333BB3759BB3756BB3757BB3761BB3768BB3760BB3769
RAKA293614 A1C_05940A1C_05945A1C_05325A1C_02390A1C_05935A1C_05845A1C_06020A1C_01860
RRIC392021 A1G_06505A1G_06510A1G_05805A1G_02500A1G_06495A1G_06190A1G_06575A1G_01950
PATL342610 PATL_2121PATL_2120PATL_2115PATL_2117PATL_2116PATL_2118PATL_2119PATL_2125PATL_2122PATL_2123PATL_2127PATL_2133PATL_2126PATL_2134
RRIC452659 RRIOWA_1393RRIOWA_1394RRIOWA_1246RRIOWA_0527RRIOWA_1392RRIOWA_1330RRIOWA_1408RRIOWA_0411
NARO279238 SARO_1339SARO_1340SARO_1938SARO_1941SARO_1357SARO_1341SARO_2367SARO_1428SARO_1427SARO_2837SARO_2368SARO_2318
AEHR187272 MLG_1420MLG_1419MLG_1416MLG_1415MLG_1417MLG_1418MLG_1424MLG_1421MLG_1422MLG_1426MLG_1429MLG_1425MLG_1430
BHEN283166 BH05360BH05370BH08490BH05380BH07620BH05350BH05340BH10200BH15250BH08720
BPET94624 BPET1756BPET1757BPET2502BPET2504BPET3553BPET2505BPET4806BPET1752BPET1755BPET1754BPET1750BPET1743BPET1751BPET1742
BTRI382640 BT_0818BT_0819BT_1168BT_0820BT_1310BT_0817BT_0816BT_1487BT_2450BT_1193
ILOI283942 IL1339IL1333IL1336IL1335IL1337IL1338IL1343IL1340IL1341IL1345IL1348IL1344IL1349
PING357804 PING_1090PING_1091PING_1096PING_1094PING_1095PING_1093PING_1092PING_1086PING_1089PING_1088PING_1084PING_2207PING_1085PING_2208
MSP266779 MESO_1767MESO_1766MESO_1584MESO_1581MESO_1582MESO_1765MESO_2359MESO_1145MESO_1768MESO_1769MESO_1648MESO_3426MESO_1711
AFER243159 AFE_1178AFE_1177AFE_2055AFE_1174AFE_1173AFE_1176AFE_1182AFE_1179AFE_1180AFE_0879AFE_1183AFE_0878
XAUT78245 XAUT_3132XAUT_3133XAUT_4330XAUT_4325XAUT_4326XAUT_3134XAUT_3581XAUT_4384XAUT_3115XAUT_3116XAUT_4767XAUT_3111XAUT_4668
BAPH198804 BUSG340BUSG343BUSG341BUSG342BUSG339BUSG338BUSG336BUSG337BUSG335
MTHE264732 MOTH_0949MOTH_0950MOTH_0049MOTH_0042MOTH_0043MOTH_1637MOTH_2109MOTH_0944MOTH_0948MOTH_0947MOTH_0869MOTH_0556
FTUL401614 FTN_1340FTN_1341FTN_1408FTN_1598FTN_1336FTN_1339FTN_1338FTN_1334FTN_1655FTN_1335FTN_1246
CSAL290398 CSAL_1602CSAL_1603CSAL_1609CSAL_1606CSAL_1607CSAL_1605CSAL_1604CSAL_1599CSAL_1601CSAL_1600CSAL_1597CSAL_1593CSAL_1598CSAL_1592
LPNE272624 LPG1396LPG1397LPG1402LPG1399LPG1398LPG0595LPG1392LPG1395LPG1394LPG2295LPG1391LPG2297
SLOI323850 SHEW_1604SHEW_1605SHEW_1582SHEW_1579SHEW_1580SHEW_1578SHEW_1577SHEW_1600SHEW_1603SHEW_1602SHEW_1598SHEW_1594SHEW_1599SHEW_1593
WPIP80849 WB_1145WB_0380WB_0943WB_0599WB_0330WB_0944WB_0747
LPNE297245 LPL1347LPL1348LPL1353LPL1350LPL1349LPL0629LPL1343LPL1346LPL1345LPL2214LPL1342LPL2216
PSTU379731 PST_2621PST_2620PST_2614PST_2617PST_2616PST_2618PST_2619PST_2624PST_2622PST_2623PST_2626PST_2630PST_2625PST_2631
HDUC233412 HD_1931HD_1936HD_1933HD_1935HD_1932HD_0773HD_0708HD_0707HD_0771HD_0645HD_0772HD_0194
LPNE400673 LPC_0812LPC_0813LPC_0818LPC_0815LPC_0814LPC_2707LPC_0808LPC_0811LPC_0810LPC_1761LPC_0807LPC_1762
LPNE297246 LPP1351LPP1352LPP1357LPP1354LPP1353LPP0645LPP1347LPP1350LPP1349LPP2242LPP1346LPP2244
ELIT314225 ELI_03985ELI_03990ELI_06230ELI_06215ELI_03995ELI_06190ELI_08625ELI_07335ELI_07340ELI_01345ELI_06775


Organism features enriched in list (features available for 72 out of the 77 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0037762492
Disease:Legionnaire's_disease 0.000215944
Disease:Meningitis_and_septicemia 0.000215944
Disease:Tularemia 0.000025455
Endospores:No 0.000069912211
Endospores:Yes 0.0053828153
Genome_Size_Range5:2-4 0.001024336197
Gram_Stain:Gram_Neg 3.146e-963333
Gram_Stain:Gram_Pos 4.042e-82150
Optimal_temp.:- 0.001792643257
Optimal_temp.:35-37 0.0000270813
Oxygen_Req:Aerobic 4.106e-742185
Oxygen_Req:Anaerobic 0.00410225102
Oxygen_Req:Facultative 0.000217012201
Salinity:Non-halophilic 0.00018603106
Temp._range:Psychrophilic 0.001949559



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951520.6823
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181600.6695
GLYCOCAT-PWY (glycogen degradation I)2461670.6410
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001850.6353
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491220.6143
PWY-5918 (heme biosynthesis I)2721720.6101
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831370.6089
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251520.5913
PWY-1269 (CMP-KDO biosynthesis I)3251860.5884
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761310.5866
PWY-4041 (γ-glutamyl cycle)2791710.5864
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911370.5828
PWY-5913 (TCA cycle variation IV)3011770.5776
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861720.5769
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391880.5737
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911710.5585
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961720.5541
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901700.5538
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911330.5527
TYRFUMCAT-PWY (tyrosine degradation I)1841300.5524
AST-PWY (arginine degradation II (AST pathway))1201000.5505
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481870.5489
P344-PWY (acrylonitrile degradation)2101400.5471
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551570.5470
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291740.4968
DAPLYSINESYN-PWY (lysine biosynthesis I)3421770.4911
PWY-5148 (acyl-CoA hydrolysis)2271380.4848
PWY-46 (putrescine biosynthesis III)1381010.4844
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3981910.4840
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81720.4821
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491450.4774
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491450.4774
CHOLINE-BETAINE-ANA-PWY (choline degradation I)135980.4708
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))138990.4677
GALACTITOLCAT-PWY (galactitol degradation)73660.4663
GLUCARDEG-PWY (D-glucarate degradation I)1521050.4654
REDCITCYC (TCA cycle variation II)1741140.4622
GLUCONSUPER-PWY (D-gluconate degradation)2291350.4579
P601-PWY (D-camphor degradation)95770.4572
PWY-5028 (histidine degradation II)130940.4565
GALACTARDEG-PWY (D-galactarate degradation I)1511030.4528
PWY-3162 (tryptophan degradation V (side chain pathway))94760.4525
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001580.4480
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3651770.4457
PWY0-862 (cis-dodecenoyl biosynthesis)3431700.4403
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation)2121260.4388
PWY-5386 (methylglyoxal degradation I)3051580.4370
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561030.4354
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4221900.4344
PWY-1501 (mandelate degradation I)73630.4340
PWY-5669 (phosphatidylethanolamine biosynthesis I)4161880.4302
PWY-5340 (sulfate activation for sulfonation)3851800.4288
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)135930.4288
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112820.4254
PWY-6193 (3-chlorocatechol degradation II (ortho))1941160.4161
GLUT-REDOX-PWY (glutathione redox reactions II)2461350.4141
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111560.4101
LIPASYN-PWY (phospholipases)2121220.4096
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3741740.4072
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94710.4041
PWY-5938 ((R)-acetoin biosynthesis I)3761740.4033
PWY-6087 (4-chlorocatechol degradation)2231250.4017



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12606   EG12303   EG12302   EG11500   EG11494   EG11493   EG11437   EG11318   EG11317   EG11119   EG11118   EG10890   EG10859   
EG500030.999990.9989790.9992310.9992710.9997410.9993250.9998560.999990.9999710.99970.9995140.9997240.999432
EG126060.9989420.9992160.9992970.9997660.9993830.9997080.9999520.9999230.9996470.9993440.9996520.999375
EG123030.9998730.9998290.9995840.9993410.998760.9988210.9987850.999040.9987080.9988330.9988
EG123020.9999010.999770.9995740.9992470.99910.999090.9991650.9988420.9990490.998882
EG115000.9996940.9994920.9990110.9991930.9991440.9991470.9989440.999150.998753
EG114940.9995680.9992360.999680.9996480.9992980.9987370.9991310.998944
EG114930.9991740.9992470.9992270.9993240.9989590.999190.999078
EG114370.9998680.9999050.9997980.9995790.9998850.999554
EG113180.9999950.9997350.9995320.9997670.999442
EG113170.999760.9995170.9997710.999468
EG111190.9995990.9998750.999584
EG111180.9994920.999846
EG108900.999514
EG10859



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PAIRWISE BLAST SCORES:

  EG50003   EG12606   EG12303   EG12302   EG11500   EG11494   EG11493   EG11437   EG11318   EG11317   EG11119   EG11118   EG10890   EG10859   
EG500030.0f0-------------
EG12606-0.0f0------------
EG12303--0.0f0-----------
EG12302---0.0f0----------
EG11500----0.0f0---------
EG11494-----0.0f0--------
EG11493------0.0f0-------
EG11437-------0.0f0------
EG11318--------0.0f0-----
EG11317---------0.0f0----
EG11119----------0.0f0---
EG11118-----------0.0f0--
EG10890------------0.0f0-
EG10859-------------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- PWY-5973 (cis-vaccenate biosynthesis) (degree of match pw to cand: 0.600, degree of match cand to pw: 0.214, average score: 0.960)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9989 EG12606 (fabF) 3-OXOACYL-ACP-SYNTHII-MONOMER (FabF)
   *in cand* 0.9996 0.9988 EG11318 (fabG) 3-OXOACYL-ACP-REDUCT-MONOMER (3-oxo-acyl-[acyl-carrier-protein] reductase)
             0.8214 0.4066 EG11284 (fabZ) FABZ-MONOMER (FabZ)
             0.9461 0.8336 EG10273 (fabA) FABA-MONOMER (FabA)
   *in cand* 0.9996 0.9990 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9988 EG10859 (rne) EG10859-MONOMER (RNase E)
   *in cand* 0.9995 0.9988 EG10890 (rpmF) EG10890-MONOMER (50S ribosomal subunit protein L32)
   *in cand* 0.9993 0.9987 EG11118 (rluC) EG11118-MONOMER (23S rRNA pseudouridine synthase)
   *in cand* 0.9995 0.9990 EG11119 (yceD) EG11119-MONOMER (conserved protein)
   *in cand* 0.9996 0.9988 EG11317 (fabD) MALONYL-COA-ACP-TRANSACYL-MONOMER (malonyl-CoA-ACP transacylase)
   *in cand* 0.9995 0.9988 EG11437 (plsX) EG11437-MONOMER (fatty acid/phospholipid synthesis protein)
   *in cand* 0.9993 0.9990 EG11493 (pabC) ADCLY-MONOMER (pabC)
   *in cand* 0.9995 0.9987 EG11494 (yceG) EG11494-MONOMER (predicted aminodeoxychorismate lyase)
   *in cand* 0.9993 0.9988 EG11500 (holB) EG11500-MONOMER (DNA polymerase III, δ prime subunit)
   *in cand* 0.9994 0.9988 EG12302 (tmk) DTMPKI-MONOMER (dTMP kinase)
   *in cand* 0.9992 0.9987 EG12303 (ycfH) EG12303-MONOMER (predicted metallodependent hydrolase)

- PWY0-881 (superpathway of fatty acid biosynthesis I (E. coli)) (degree of match pw to cand: 0.308, degree of match cand to pw: 0.286, average score: 0.874)
  Genes in pathway or complex:
             0.9994 0.9984 EG10277 (fabH) FABH-MONOMER (FabH)
             0.4660 0.0003 EG10275 (accB) BCCP-BIOTIN (biotinylated biotin-carboxyl carrier protein)
             0.4905 0.0009 EG10276 (accC) BIOTIN-CARBOXYL-MONOMER (AccC)
             0.6521 0.2232 EG11647 (accA) CARBOXYL-TRANSFERASE-ALPHA-MONOMER (acetyl-CoA carboxyltransferase, α subunit)
             0.8917 0.6362 EG10217 (accD) CARBOXYL-TRANSFERASE-BETA-MONOMER (acetyl-CoA carboxyltransferase, β subunit)
   *in cand* 0.9996 0.9988 EG11317 (fabD) MALONYL-COA-ACP-TRANSACYL-MONOMER (malonyl-CoA-ACP transacylase)
   *in cand* 0.9996 0.9989 EG12606 (fabF) 3-OXOACYL-ACP-SYNTHII-MONOMER (FabF)
             0.8794 0.2315 EG10274 (fabB) FABB-MONOMER (FabB)
   *in cand* 0.9996 0.9988 EG11318 (fabG) 3-OXOACYL-ACP-REDUCT-MONOMER (3-oxo-acyl-[acyl-carrier-protein] reductase)
             0.9114 0.5416 EG11528 (fabI) ENOYL-ACP-REDUCT-NADH-MONOMER (enoyl-[acyl-carrier-protein] reductase)
             0.8214 0.4066 EG11284 (fabZ) FABZ-MONOMER (FabZ)
             0.9461 0.8336 EG10273 (fabA) FABA-MONOMER (FabA)
   *in cand* 0.9996 0.9990 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9988 EG10859 (rne) EG10859-MONOMER (RNase E)
   *in cand* 0.9995 0.9988 EG10890 (rpmF) EG10890-MONOMER (50S ribosomal subunit protein L32)
   *in cand* 0.9993 0.9987 EG11118 (rluC) EG11118-MONOMER (23S rRNA pseudouridine synthase)
   *in cand* 0.9995 0.9990 EG11119 (yceD) EG11119-MONOMER (conserved protein)
   *in cand* 0.9995 0.9988 EG11437 (plsX) EG11437-MONOMER (fatty acid/phospholipid synthesis protein)
   *in cand* 0.9993 0.9990 EG11493 (pabC) ADCLY-MONOMER (pabC)
   *in cand* 0.9995 0.9987 EG11494 (yceG) EG11494-MONOMER (predicted aminodeoxychorismate lyase)
   *in cand* 0.9993 0.9988 EG11500 (holB) EG11500-MONOMER (DNA polymerase III, δ prime subunit)
   *in cand* 0.9994 0.9988 EG12302 (tmk) DTMPKI-MONOMER (dTMP kinase)
   *in cand* 0.9992 0.9987 EG12303 (ycfH) EG12303-MONOMER (predicted metallodependent hydrolase)

- FASYN-INITIAL-PWY (superpathway of fatty acid biosynthesis initiation (E. coli)) (degree of match pw to cand: 0.333, degree of match cand to pw: 0.214, average score: 0.877)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9988 EG11317 (fabD) MALONYL-COA-ACP-TRANSACYL-MONOMER (malonyl-CoA-ACP transacylase)
             0.4660 0.0003 EG10275 (accB) BCCP-BIOTIN (biotinylated biotin-carboxyl carrier protein)
             0.4905 0.0009 EG10276 (accC) BIOTIN-CARBOXYL-MONOMER (AccC)
             0.6521 0.2232 EG11647 (accA) CARBOXYL-TRANSFERASE-ALPHA-MONOMER (acetyl-CoA carboxyltransferase, α subunit)
             0.8917 0.6362 EG10217 (accD) CARBOXYL-TRANSFERASE-BETA-MONOMER (acetyl-CoA carboxyltransferase, β subunit)
             0.9994 0.9984 EG10277 (fabH) FABH-MONOMER (FabH)
             0.8794 0.2315 EG10274 (fabB) FABB-MONOMER (FabB)
   *in cand* 0.9996 0.9989 EG12606 (fabF) 3-OXOACYL-ACP-SYNTHII-MONOMER (FabF)
   *in cand* 0.9996 0.9990 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9988 EG10859 (rne) EG10859-MONOMER (RNase E)
   *in cand* 0.9995 0.9988 EG10890 (rpmF) EG10890-MONOMER (50S ribosomal subunit protein L32)
   *in cand* 0.9993 0.9987 EG11118 (rluC) EG11118-MONOMER (23S rRNA pseudouridine synthase)
   *in cand* 0.9995 0.9990 EG11119 (yceD) EG11119-MONOMER (conserved protein)
   *in cand* 0.9996 0.9988 EG11318 (fabG) 3-OXOACYL-ACP-REDUCT-MONOMER (3-oxo-acyl-[acyl-carrier-protein] reductase)
   *in cand* 0.9995 0.9988 EG11437 (plsX) EG11437-MONOMER (fatty acid/phospholipid synthesis protein)
   *in cand* 0.9993 0.9990 EG11493 (pabC) ADCLY-MONOMER (pabC)
   *in cand* 0.9995 0.9987 EG11494 (yceG) EG11494-MONOMER (predicted aminodeoxychorismate lyase)
   *in cand* 0.9993 0.9988 EG11500 (holB) EG11500-MONOMER (DNA polymerase III, δ prime subunit)
   *in cand* 0.9994 0.9988 EG12302 (tmk) DTMPKI-MONOMER (dTMP kinase)
   *in cand* 0.9992 0.9987 EG12303 (ycfH) EG12303-MONOMER (predicted metallodependent hydrolase)

- FASYN-ELONG-PWY (fatty acid elongation -- saturated) (degree of match pw to cand: 0.429, degree of match cand to pw: 0.214, average score: 0.919)
  Genes in pathway or complex:
             0.9461 0.8336 EG10273 (fabA) FABA-MONOMER (FabA)
             0.8214 0.4066 EG11284 (fabZ) FABZ-MONOMER (FabZ)
             0.9114 0.5416 EG11528 (fabI) ENOYL-ACP-REDUCT-NADH-MONOMER (enoyl-[acyl-carrier-protein] reductase)
   *in cand* 0.9996 0.9988 EG11318 (fabG) 3-OXOACYL-ACP-REDUCT-MONOMER (3-oxo-acyl-[acyl-carrier-protein] reductase)
             0.8794 0.2315 EG10274 (fabB) FABB-MONOMER (FabB)
   *in cand* 0.9996 0.9989 EG12606 (fabF) 3-OXOACYL-ACP-SYNTHII-MONOMER (FabF)
   *in cand* 0.9996 0.9990 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9988 EG10859 (rne) EG10859-MONOMER (RNase E)
   *in cand* 0.9995 0.9988 EG10890 (rpmF) EG10890-MONOMER (50S ribosomal subunit protein L32)
   *in cand* 0.9993 0.9987 EG11118 (rluC) EG11118-MONOMER (23S rRNA pseudouridine synthase)
   *in cand* 0.9995 0.9990 EG11119 (yceD) EG11119-MONOMER (conserved protein)
   *in cand* 0.9996 0.9988 EG11317 (fabD) MALONYL-COA-ACP-TRANSACYL-MONOMER (malonyl-CoA-ACP transacylase)
   *in cand* 0.9995 0.9988 EG11437 (plsX) EG11437-MONOMER (fatty acid/phospholipid synthesis protein)
   *in cand* 0.9993 0.9990 EG11493 (pabC) ADCLY-MONOMER (pabC)
   *in cand* 0.9995 0.9987 EG11494 (yceG) EG11494-MONOMER (predicted aminodeoxychorismate lyase)
   *in cand* 0.9993 0.9988 EG11500 (holB) EG11500-MONOMER (DNA polymerase III, δ prime subunit)
   *in cand* 0.9994 0.9988 EG12302 (tmk) DTMPKI-MONOMER (dTMP kinase)
   *in cand* 0.9992 0.9987 EG12303 (ycfH) EG12303-MONOMER (predicted metallodependent hydrolase)

- PWY-6284 (superpathway of unsaturated fatty acids biosynthesis (E. coli)) (degree of match pw to cand: 0.375, degree of match cand to pw: 0.214, average score: 0.885)
  Genes in pathway or complex:
             0.8362 0.4855 EG11542 (tesA) THIOESTERI-MONOMER (TesA)
             0.8794 0.2315 EG10274 (fabB) FABB-MONOMER (FabB)
             0.9114 0.5416 EG11528 (fabI) ENOYL-ACP-REDUCT-NADH-MONOMER (enoyl-[acyl-carrier-protein] reductase)
             0.9461 0.8336 EG10273 (fabA) FABA-MONOMER (FabA)
             0.8214 0.4066 EG11284 (fabZ) FABZ-MONOMER (FabZ)
   *in cand* 0.9996 0.9988 EG11318 (fabG) 3-OXOACYL-ACP-REDUCT-MONOMER (3-oxo-acyl-[acyl-carrier-protein] reductase)
   *in cand* 0.9996 0.9989 EG12606 (fabF) 3-OXOACYL-ACP-SYNTHII-MONOMER (FabF)
   *in cand* 0.9996 0.9990 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9988 EG10859 (rne) EG10859-MONOMER (RNase E)
   *in cand* 0.9995 0.9988 EG10890 (rpmF) EG10890-MONOMER (50S ribosomal subunit protein L32)
   *in cand* 0.9993 0.9987 EG11118 (rluC) EG11118-MONOMER (23S rRNA pseudouridine synthase)
   *in cand* 0.9995 0.9990 EG11119 (yceD) EG11119-MONOMER (conserved protein)
   *in cand* 0.9996 0.9988 EG11317 (fabD) MALONYL-COA-ACP-TRANSACYL-MONOMER (malonyl-CoA-ACP transacylase)
   *in cand* 0.9995 0.9988 EG11437 (plsX) EG11437-MONOMER (fatty acid/phospholipid synthesis protein)
   *in cand* 0.9993 0.9990 EG11493 (pabC) ADCLY-MONOMER (pabC)
   *in cand* 0.9995 0.9987 EG11494 (yceG) EG11494-MONOMER (predicted aminodeoxychorismate lyase)
   *in cand* 0.9993 0.9988 EG11500 (holB) EG11500-MONOMER (DNA polymerase III, δ prime subunit)
   *in cand* 0.9994 0.9988 EG12302 (tmk) DTMPKI-MONOMER (dTMP kinase)
   *in cand* 0.9992 0.9987 EG12303 (ycfH) EG12303-MONOMER (predicted metallodependent hydrolase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10859 EG10890 EG11118 EG11119 EG11317 EG11318 EG11437 EG11493 EG11494 EG11500 EG12302 EG12303 EG12606 EG50003 (centered at EG50003)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG50003   EG12606   EG12303   EG12302   EG11500   EG11494   EG11493   EG11437   EG11318   EG11317   EG11119   EG11118   EG10890   EG10859   
413/623409/623417/623410/623271/623413/623292/623419/623411/623407/623176/623383/623299/623330/623
AAEO224324:0:Tyes6666679091367670-22366576----
AAUR290340:2:Tyes---0---------1447
AAVE397945:0:Tyes13142201220422032205-912117180
ABAC204669:0:Tyes4280428117802985-297-391404349----
ABAU360910:0:Tyes2062078508480847-202205204200193201192
ABOR393595:0:Tyes101117141513127985160
ABUT367737:0:Tyes17591758---1017-0-1289----
ACAU438753:0:Tyes4057405818921887-40591303201140564055-224103356
ACEL351607:0:Tyes--0179217911149--972----577
ACRY349163:8:Tyes12541255634--12562289012531252---117
ADEH290397:0:Tyes271527141266--11822620271927162717-0-642
AEHR187272:0:Tyes54-102396711141015
AFER243159:0:Tyes2972961164294293-295301298299-13020
AFUL224325:0:Tyes------0-------
AHYD196024:0:Tyes13141917181615912117180
ALAI441768:0:Tyes----0---------
AMAR234826:0:Tyes-170246----548-0-264549527
AMAR329726:9:Tyes5431543035135934-037336065541-----
AMET293826:0:Tyes-26446436-02057265026462647---2198
ANAE240017:0:Tyes---1892-333-------0
AORE350688:0:Tyes-13902664350-138413881387---1684
APHA212042:0:Tyes-585202----1---222027
APLE416269:0:Tyes459-449454453455-06306312521151
APLE434271:0:Tno474-462469468470-06616622545161
ASAL382245:5:Tyes6502134107812151117
ASP1667:3:Tyes---0---------1684
ASP232721:2:Tyes203820375295261137525-2042203920402044020432050
ASP62928:0:Tyes34354120-30333228222921
ASP62977:0:Tyes409-17992012-20132014-40840740524060
ASP76114:2:Tyes33344120-29323127232821
AVAR240292:3:Tyes1689168822440---7671805-----
BABO262698:0:Tno------0-------
BABO262698:1:Tno24490486-5-28910-4931231421
BAFZ390236:2:Fyes-----0--------
BAMB339670:3:Tno1415859861860862-1013128290
BAMB398577:3:Tno1314816818817819-912117180
BAMY326423:0:Tyes15341093110-240550153115331532-1488--
BANT260799:0:Tno3719113590-42962131372237203721-3761--
BANT261594:2:Tno3624106990-42242052362736253626----
BANT568206:2:Tyes539327390-44602226536538537----
BANT592021:2:Tno3841111790-44502157384438423843-3883--
BAPH198804:0:Tyes5-867---43-120
BAPH372461:0:Tyes--6-5---3--01-
BBAC264462:0:Tyes1735173483783583601475-17361737--1739-
BBAC360095:0:Tyes354355649--357-482353352-5700-
BBRO257310:0:Tyes34513450232523231113232203455345234533457346434563465
BBUR224326:21:Fno-----0--------
BCAN483179:0:Tno------0-------
BCAN483179:1:Tno24534530-5-31810-5371305450
BCEN331271:0:Tno--3120--------
BCEN331271:2:Tno1314-----912117180
BCEN331272:3:Tyes1314779781780782-912117180
BCER226900:1:Tyes3735112380-42582139373837363737-3778--
BCER288681:0:Tno363011110--41472068363336313632-3672--
BCER315749:1:Tyes233882690-29211564234123392340-2375--
BCER405917:1:Tyes364512020---2139364836463647-3690--
BCER572264:1:Tno3749104790-42842153375237503751-3792--
BCIC186490:0:Tyes4-021-3-56-10911
BCLA66692:0:Tyes23042561170-159563230723052306-2343--
BFRA272559:1:Tyes10---1441---2083---1311
BFRA295405:0:Tno10---1492---2060---1351
BGAR290434:2:Fyes-----0--------
BHAL272558:0:Tyes25232927120-13002846252625242525-2575-3059
BHEN283166:0:Tyes23295--4-21210-451895317
BJAP224911:0:Fyes3151315235873590-31536690409931503149-444703372
BLIC279010:0:Tyes17201155110327432840171717191718-1673--
BLON206672:0:Tyes---0----------
BMAL243160:1:Tno1213788791790792-811106170
BMAL320388:1:Tno5455440324-549546547552559551560
BMAL320389:1:Tyes5965950324-600597598603610602611
BMEL224914:0:Tno------0-------
BMEL224914:1:Tno12331231733736-1229-93612351236-7300808
BMEL359391:0:Tno------0-------
BMEL359391:1:Tno24479475-5-28810-4831190413
BOVI236:0:Tyes------0-------
BOVI236:1:Tyes23450447-4-27410-4531114403
BPAR257311:0:Tno2825282411751173862117202829282628272831283828302839
BPER257313:0:Tyes176617651233123196812302571770176717681772117710
BPET94624:0:Tyes1415759761183876230981013128190
BPSE272560:0:Tyes------0-------
BPSE272560:1:Tyes9989974120-100299910001004101010031011
BPSE320372:0:Tno------0-------
BPSE320372:1:Tno484483--0--488485486490496489497
BPSE320373:0:Tno------0-------
BPSE320373:1:Tno4814800324-485482483487493486494
BPUM315750:0:Tyes15181085110-23862483151515171516-1472--
BQUI283165:0:Tyes23134--4-8110-299653116
BSP107806:2:Tyes4-756---3--120
BSP36773:2:Tyes1314980982981983-912117180
BSP376:0:Tyes2619262031063103-26215318367526172616-387602800
BSUB:0:Tyes169811991103287950169516971696-1648--
BSUI204722:0:Tyes------0-------
BSUI204722:1:Tyes24522518-5-30810-5261277442
BSUI470137:0:Tno------0-----314-
BSUI470137:1:Tno24540536-5-31410-543-453
BTHA271848:0:Tno------0-------
BTHA271848:1:Tno1314437434435433-912117180
BTHE226186:0:Tyes29922991---0--3408366---1097
BTHU281309:1:Tno351810220--40421975352135193520-3561--
BTHU412694:1:Tno3340102390-38151953334333413342-3381--
BTRI382640:1:Tyes23313--4-44810-6071207338
BVIE269482:7:Tyes1314778780779781-912117180
BWEI315730:4:Tyes365511418-042022115365836563657-3699--
CABO218497:0:Tyes1--22----0----300
CACE272562:1:Tyes95127832202--889095027842785-1310--
CAULO:0:Tyes315316-460-31716100313312-621-514
CBEI290402:0:Tyes-809---84637839038080-1322--
CBLO203907:0:Tyes4-021-3856-10911
CBLO291272:0:Tno4-021-3856-10911
CBOT36826:1:Tno01135---102-111361137-525--
CBOT441770:0:Tyes01281---167-112821283-669--
CBOT441771:0:Tno01175---116-111761177-560--
CBOT441772:1:Tno01203---101-112041205-505--
CBOT498213:1:Tno01239---174-112401241-617--
CBOT508765:1:Tyes-9790--1009-1066978--2249--
CBOT515621:2:Tyes01174---107-111751176-547--
CBOT536232:0:Tno01253---107-112541255-602--
CBUR227377:1:Tyes7576817879770717473-667065
CBUR360115:1:Tno8081858384820767978-717570
CBUR434922:2:Tno54021379967-141015
CCAV227941:1:Tyes154--1750---153152---474
CCHL340177:0:Tyes16281627-884-0-163216291630---1955
CCON360104:2:Tyes-1170945--6283960------
CCUR360105:0:Tyes-0264----1257------
CDES477974:0:Tyes5825836018401963577581580-872-1381
CDIF272563:1:Tyes-62391--48277043----
CDIP257309:0:Tyes----01002-------1432
CEFF196164:0:Fyes----0------18-1997
CFEL264202:1:Tyes330--310----331----0
CFET360106:0:Tyes-1096935--671-0------
CGLU196627:0:Tyes----0------76-2102
CHOM360107:1:Tyes-0-----1234------
CHUT269798:0:Tyes320319---0225545131376----
CHYD246194:0:Tyes13601359-0-4832540136513611362-1419--
CJAP155077:0:Tyes101130831531113127985260
CJEI306537:0:Tyes----79------0--
CJEJ192222:0:Tyes-117---204-0------
CJEJ195099:0:Tno-120---255-0------
CJEJ354242:2:Tyes-111---189-0------
CJEJ360109:0:Tyes-86---0-205------
CJEJ407148:0:Tno-116---195-0------
CKLU431943:1:Tyes126003596--1196-1259-1597-1064--
CMET456442:0:Tyes------0-------
CMIC31964:2:Tyes---0-531-------1575
CMIC443906:2:Tyes---0-896-------574
CMUR243161:1:Tyes312--265415---313----0
CNOV386415:0:Tyes1272221312206-13241849127310-1004--
CPEL335992:0:Tyes2-293----328-0--32925
CPER195102:1:Tyes65121522--705--10-782--
CPER195103:0:Tno63621437--689-63710-763--
CPER289380:3:Tyes54621321--598-54710-673--
CPHY357809:0:Tyes-2-----191010----
CPNE115711:1:Tyes0--22---------430
CPNE115713:0:Tno22--0---------699
CPNE138677:0:Tno22--0---------706
CPNE182082:0:Tno24--0---------737
CPRO264201:0:Fyes---0--255-654-----
CPSY167879:0:Tyes91016131412116874150
CRUT413404:0:Tyes4624630140--1393857877883871386339
CSAL290398:0:Tyes101117141513127985160
CSP501479:2:Fyes------0-------
CSP501479:8:Fyes67725501584-256-578676675---311
CSP78:2:Tyes863864-1043-86525751389862861-0-916
CSUL444179:0:Tyes0-------------
CTEP194439:0:Tyes794795-0-900--793792---936
CTET212717:0:Tyes-2110--863-102910-1376--
CTRA471472:0:Tyes310--257----311----0
CTRA471473:0:Tno310--257----311----0
CVES412965:0:Tyes4264270131--1303537157163551354312
CVIO243365:0:Tyes16281627194819511950195216251632162916301634016332
DARO159087:0:Tyes1213186189188190-81110-170
DDES207559:0:Tyes24052406-2308-254024022404----476
DETH243164:0:Tyes703399-223---0701700-798--
DGEO319795:1:Tyes422423-19602112403-1812421420--0-
DHAF138119:0:Tyes257225700--23281251257725732574-1175--
DNOD246195:0:Tyes879880-882-881-8758788778736758740
DOLE96561:0:Tyes1558--632090565-1559----1920
DPSY177439:2:Tyes277927782769-72429100-2780----3001
DRAD243230:3:Tyes17961795-022592395--17971799--2215-
DRED349161:0:Tyes20272026701858-203220282029-1636-2502
DSHI398580:0:Tyes------0-------
DSHI398580:5:Tyes1279127802-1277-80612801281--8051440
DSP216389:0:Tyes594351-194---0592591-690--
DSP255470:0:Tno606365-214---0604603-703--
DVUL882:1:Tyes10-930-1856198342---51842
ECAN269484:0:Tyes-065----358158---359338
ECAR218491:0:Tyes101116141513126984250
ECHA205920:0:Tyes-413327----1----022
ECOL199310:0:Tno101118161715126-852-0
ECOL316407:0:Tno1112171516141371095260
ECOL331111:6:Tno89141213111047631-0
ECOL362663:0:Tno101116141513126984250
ECOL364106:1:Tno111218161715136984250
ECOL405955:2:Tyes-10151314121158742-0
ECOL409438:6:Tyes1112171516141371095260
ECOL413997:0:Tno101116141513126984250
ECOL439855:4:Tno6502134107812141115
ECOL469008:0:Tno6502134107812141115
ECOL481805:0:Tno6502134107812141115
ECOL585034:0:Tno1112171516141371095260
ECOL585035:0:Tno1112171516141371095260
ECOL585055:0:Tno1112171516141371095260
ECOL585056:2:Tno101118161715146984150
ECOL585057:0:Tno6502134107812151117
ECOL585397:0:Tno1112171516141371095260
ECOL83334:0:Tno101116141513126984250
ECOLI:0:Tno1112171516141371095260
ECOO157:0:Tno101116141513126984250
EFAE226185:3:Tyes-06022328-2469-2659-2438-1361279-
EFER585054:1:Tyes6502134107812151116
ELIT314225:0:Tyes538539996993-540988147912181219-0-1106
ERUM254945:0:Tyes-093----400186---401375
ERUM302409:0:Tno-092----395----396369
ESP42895:1:Tyes91015131412115873140
FALN326424:0:Tyes4799-4267--3260-------0
FJOH376686:0:Tyes11391140---0134-29211742-2649--
FMAG334413:1:Tyes--0619--536-------
FNOD381764:0:Tyes334--4190--566---847--
FNUC190304:0:Tyes5505511743--2470547894549----
FPHI484022:1:Tyes41141033768---4154124134170416502
FRANT:0:Tno12411242129958---1237124012391235012361084
FSP106370:0:Tyes-----1986-------0
FSP1855:0:Tyes4516-0--921--1457----4424
FSUC59374:0:Tyes--918366271376--24170-616--
FTUL351581:0:Tno4444430909---448445446450104644992
FTUL393011:0:Tno4014000801---40540240340792740684
FTUL393115:0:Tyes12181219127558---1214121712161212012131072
FTUL401614:0:Tyes9394160349---89929187405880
FTUL418136:0:Tno32732625860---3313283293330332510
FTUL458234:0:Tno4164150834---42041741842296142193
GBET391165:0:Tyes19261925795792-192483873019281929---0
GFOR411154:0:Tyes31063107--30193501165-14910-2406--
GKAU235909:1:Tyes123384680126142724123012321231-1188--
GMET269799:1:Tyes4587472818261424-032-1841-950
GOXY290633:5:Tyes2012201303-2014-10120112010-16361021702
GSUL243231:0:Tyes151215132395213512422-150815111510-0-833
GTHE420246:1:Tyes101065580124202526100710091008-971--
GURA351605:0:Tyes99299316282260-2725-988991990-0-383
GVIO251221:0:Tyes22633989-611-1066253873434752096-0--
HACI382638:1:Tyes-355-----0------
HARS204773:0:Tyes63363251-0-637634635-645638647
HAUR316274:2:Tyes7-220--3753-11230-2171--
HCHE349521:0:Tyes11-26814505131281096170
HDUC233412:0:Tyes1515-1520151815191517-5084534525063995070
HHAL349124:0:Tyes12470-34211251124812491253125612521257
HHEP235279:0:Tyes4847-----0------
HINF281310:0:Tyes0-303307304308--1252624263
HINF374930:0:Tyes315-3120--3143133094431043
HINF71421:0:Tno0-289291290292--1252474248
HMAR272569:8:Tyes------0-------
HMOD498761:0:Tyes1906190896996196201252190119051904-1844--
HMUK485914:1:Tyes------0-------
HNEP81032:0:Tyes14581457-1121-1456166647914591461--12850
HPY:0:Tno-365-----0------
HPYL357544:1:Tyes-346-----0------
HPYL85963:0:Tno-313-----0------
HSAL478009:4:Tyes------0-------
HSOM205914:1:Tyes6-1326132813271329--5405571558
HSOM228400:0:Tno6-494492493491--540111811119
HSP64091:2:Tno------0-------
HWAL362976:1:Tyes------0-------
ILOI283942:0:Tyes6-03245107812151116
JSP290400:1:Tyes35435602-3571597513353351--5141281
JSP375286:0:Tyes1314647651650652-912117180
KPNE272620:2:Tyes23867545426105424542254255421
KRAD266940:2:Fyes---0-2011--------
LACI272621:0:Tyes--0166---1075---928742-
LBIF355278:2:Tyes2476-3308-330132070-------
LBIF456481:2:Tno0-869-8627688795------
LBOR355276:1:Tyes0-1833--1363--------
LBOR355277:1:Tno1851-0--541--------
LBRE387344:2:Tyes--0135-528-475---361--
LCAS321967:1:Tyes--1208882---254---1000-
LCHO395495:0:Tyes17161302129913001298714211819230221
LDEL321956:0:Tyes--01044---858---544405-
LDEL390333:0:Tyes--0980---795---551406-
LGAS324831:0:Tyes---0-975-386---613--
LHEL405566:0:Tyes---0---820---707540-
LINN272626:1:Tno1734212202682-13221448173717351736-1771278-
LINT189518:0:Tyes0-------------
LINT189518:1:Tyes--3820--0--------
LINT267671:0:Tno0-------------
LINT267671:1:Tno--462--0--------
LINT363253:3:Tyes-0-598-3417533-----609
LJOH257314:0:Tyes--0239-1230-1131---839--
LLAC272622:5:Tyes--602352353549---702-9430-
LLAC272623:0:Tyes--593304305541---679-9040-
LMES203120:1:Tyes--13010---245---1060--
LMON169963:0:Tno1665206502582-13301450166816661667-1702313-
LMON265669:0:Tyes1622201902455-13111433162516231624-1659315-
LPLA220668:0:Tyes---0-727-788---916--
LPNE272624:0:Tno800801806803-8020796799798-16987951700
LPNE297245:1:Fno711712717714-7130707710709-15837061585
LPNE297246:1:Fyes698699704701-7000694697696-15976931599
LPNE400673:0:Tno56118-71859143-9310932
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