CANDIDATE ID: 50

CANDIDATE ID: 50

NUMBER OF GENES: 13
AVERAGE SCORE:    9.9934347e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    2.3076923e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7342 (yphF) (b2548)
   Products of gene:
     - G7342-MONOMER (YphF)
     - ABC-60-CPLX (YphD/YphE/YphF ABC transporter)

- G7340 (yphD) (b2546)
   Products of gene:
     - YPHD-MONOMER (YphD)
     - ABC-60-CPLX (YphD/YphE/YphF ABC transporter)

- G6959 (ydjH) (b1772)
   Products of gene:
     - G6959-MONOMER (predicted kinase)

- EG12517 (ytfQ) (b4227)
   Products of gene:
     - YTFQ-MONOMER (YtfQ)
     - ABC-46-CPLX (galactose ABC transporter)
       Reactions:
        ATP + beta-D-galactose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-galactose[cytosol]

- EG12275 (xylG) (b3567)
   Products of gene:
     - XYLG-MONOMER (XylG)
     - ABC-33-CPLX (XylF/XylG/XylH xylose ABC transporter)
       Reactions:
        ATP + alpha-D-xylose[periplasmic space] + H2O  ->  ADP + phosphate + alpha-D-xylose[cytosol]

- EG12028 (yeiI) (b2160)
   Products of gene:
     - EG12028-MONOMER (predicted kinase)

- EG11958 (alsC) (b4086)
   Products of gene:
     - YJCV-MONOMER (AlsC)
     - ABC-42-CPLX (D-allose ABC transporter)
       Reactions:
        D-allose[periplasmic space] + ATP + H2O  ->  D-allose[cytosol] + ADP + phosphate

- EG11646 (pscK) (b2166)
   Products of gene:
     - EG11646-MONOMER (predicted pseudouridine kinase)
       Reactions:
        pseudouridine + ATP  ->  pseudouridine 5'-phosphate + ADP + 2 H+
         In pathways
         PWY-6019 (PWY-6019)

- EG10818 (rbsK) (b3752)
   Products of gene:
     - RIBOKIN-MONOMER (ribokinase)
     - CPLX0-7647 (ribokinase)
       Reactions:
        D-ribose + ATP  ->  D-ribose-5-phosphate + ADP + 2 H+
         In pathways
         RIBOKIN-PWY (ribose degradation)

- EG10817 (rbsD) (b3748)
   Products of gene:
     - EG10817-MONOMER (ribose pyranase)
     - CPLX0-7646 (ribose pyranase)
       Reactions:
        beta-D-ribofuranose  =  beta-D-ribopyranose
         In pathways
         RIBOKIN-PWY (ribose degradation)

- EG10816 (rbsC) (b3750)
   Products of gene:
     - RBSC-MONOMER (RbsC)
     - ABC-28-CPLX (ribose ABC transporter)
       Reactions:
        ATP + beta-D-ribopyranose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-ribopyranose[cytosol]

- EG10815 (rbsB) (b3751)
   Products of gene:
     - RBSB-MONOMER (RbsB)
     - ABC-28-CPLX (ribose ABC transporter)
       Reactions:
        ATP + beta-D-ribopyranose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-ribopyranose[cytosol]

- EG10814 (rbsA) (b3749)
   Products of gene:
     - RBSA-MONOMER (RbsA)
     - ABC-28-CPLX (ribose ABC transporter)
       Reactions:
        ATP + beta-D-ribopyranose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-ribopyranose[cytosol]



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ORGANISMS CONTAINING AT LEAST 11 GENES FROM THE GROUP:

Total number of orgs: 135
Effective number of orgs (counting one per cluster within 468 clusters): 84

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175813
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295313
YPES386656 ncbi Yersinia pestis Pestoides F13
YPES377628 ncbi Yersinia pestis Nepal51613
YPES360102 ncbi Yersinia pestis Antiqua13
YPES349746 ncbi Yersinia pestis Angola13
YPES214092 ncbi Yersinia pestis CO9213
YPES187410 ncbi Yersinia pestis KIM 1013
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808113
VVUL216895 ncbi Vibrio vulnificus CMCP613
VVUL196600 ncbi Vibrio vulnificus YJ01613
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 221063313
VFIS312309 ncbi Vibrio fischeri ES11413
VEIS391735 ncbi Verminephrobacter eiseniae EF01-211
VCHO345073 ncbi Vibrio cholerae O39512
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N1696112
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB413
TSP1755 Thermoanaerobacter sp.13
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 3322313
TMAR243274 ncbi Thermotoga maritima MSB811
TLET416591 ncbi Thermotoga lettingae TMO11
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT213
SSON300269 ncbi Shigella sonnei Ss04613
SPRO399741 ncbi Serratia proteamaculans 56813
SPEA398579 ncbi Shewanella pealeana ATCC 70034513
SMEL266834 ncbi Sinorhizobium meliloti 102112
SMED366394 ncbi Sinorhizobium medicae WSM41911
SHIGELLA ncbi Shigella flexneri 2a str. 2457T11
SHAL458817 ncbi Shewanella halifaxensis HAW-EB413
SFLE373384 ncbi Shigella flexneri 5 str. 840111
SFLE198214 ncbi Shigella flexneri 2a str. 30112
SERY405948 ncbi Saccharopolyspora erythraea NRRL 233812
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47613
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6713
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1813
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty213
SCO ncbi Streptomyces coelicolor A3(2)13
SBOY300268 ncbi Shigella boydii Sb22713
SAVE227882 ncbi Streptomyces avermitilis MA-468013
RXYL266117 ncbi Rubrobacter xylanophilus DSM 994112
RSOL267608 ncbi Ralstonia solanacearum GMI100011
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 384112
RETL347834 ncbi Rhizobium etli CFN 4211
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC300011
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a13
PSP117 Pirellula sp.13
PPRO298386 ncbi Photobacterium profundum SS913
PMUL272843 ncbi Pasteurella multocida multocida Pm7013
PMOB403833 ncbi Petrotoga mobilis SJ9512
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO112
PING357804 ncbi Psychromonas ingrahamii 3713
PFLU220664 ncbi Pseudomonas fluorescens Pf-512
PFLU216595 ncbi Pseudomonas fluorescens SBW2512
PFLU205922 ncbi Pseudomonas fluorescens Pf0-111
OIHE221109 ncbi Oceanobacillus iheyensis HTE83113
OANT439375 ncbi Ochrobactrum anthropi ATCC 4918811
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E12
MSP400668 ncbi Marinomonas sp. MWYL111
MLOT266835 ncbi Mesorhizobium loti MAFF30309912
LLAC272623 ncbi Lactococcus lactis lactis Il140312
LCAS321967 ncbi Lactobacillus casei ATCC 33411
LACI272621 ncbi Lactobacillus acidophilus NCFM12
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857813
HSOM228400 ncbi Haemophilus somnus 233613
HSOM205914 ncbi Haemophilus somnus 129PT12
HMOD498761 ncbi Heliobacterium modesticaldum Ice112
HINF71421 ncbi Haemophilus influenzae Rd KW2013
HINF374930 ncbi Haemophilus influenzae PittEE13
HINF281310 ncbi Haemophilus influenzae 86-028NP13
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-213
GKAU235909 ncbi Geobacillus kaustophilus HTA42613
ESP42895 Enterobacter sp.13
EFER585054 ncbi Escherichia fergusonii ATCC 3546913
ECOO157 ncbi Escherichia coli O157:H7 EDL93313
ECOL83334 Escherichia coli O157:H713
ECOL585397 ncbi Escherichia coli ED1a13
ECOL585057 ncbi Escherichia coli IAI3913
ECOL585056 ncbi Escherichia coli UMN02613
ECOL585055 ncbi Escherichia coli 5598913
ECOL585035 ncbi Escherichia coli S8813
ECOL585034 ncbi Escherichia coli IAI113
ECOL481805 ncbi Escherichia coli ATCC 873913
ECOL469008 ncbi Escherichia coli BL21(DE3)12
ECOL439855 ncbi Escherichia coli SMS-3-513
ECOL413997 ncbi Escherichia coli B str. REL60613
ECOL409438 ncbi Escherichia coli SE1113
ECOL405955 ncbi Escherichia coli APEC O113
ECOL364106 ncbi Escherichia coli UTI8913
ECOL362663 ncbi Escherichia coli 53613
ECOL331111 ncbi Escherichia coli E24377A13
ECOL316407 ncbi Escherichia coli K-12 substr. W311013
ECOL199310 ncbi Escherichia coli CFT07313
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104312
DRED349161 ncbi Desulfotomaculum reducens MI-112
CVIO243365 ncbi Chromobacterium violaceum ATCC 1247211
CTET212717 ncbi Clostridium tetani E8813
CNOV386415 ncbi Clostridium novyi NT12
CDIF272563 ncbi Clostridium difficile 63011
CBOT515621 ncbi Clostridium botulinum Ba4 str. 65711
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B12
BXEN266265 ncbi Burkholderia xenovorans LB40012
BWEI315730 ncbi Bacillus weihenstephanensis KBAB412
BVIE269482 ncbi Burkholderia vietnamiensis G412
BTHU412694 ncbi Bacillus thuringiensis Al Hakam12
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-2713
BTHA271848 ncbi Burkholderia thailandensis E26412
BSUI470137 ncbi Brucella suis ATCC 2344511
BSUI204722 ncbi Brucella suis 133011
BSUB ncbi Bacillus subtilis subtilis 16813
BSP36773 Burkholderia sp.12
BPUM315750 ncbi Bacillus pumilus SAFR-03213
BPSE320373 ncbi Burkholderia pseudomallei 66811
BPSE320372 ncbi Burkholderia pseudomallei 1710b11
BPSE272560 ncbi Burkholderia pseudomallei K9624311
BLIC279010 ncbi Bacillus licheniformis ATCC 1458013
BHAL272558 ncbi Bacillus halodurans C-12511
BCLA66692 ncbi Bacillus clausii KSM-K1612
BCER572264 ncbi Bacillus cereus 03BB10212
BCER405917 Bacillus cereus W12
BCER315749 ncbi Bacillus cytotoxicus NVH 391-9812
BCER288681 ncbi Bacillus cereus E33L12
BCEN331272 ncbi Burkholderia cenocepacia HI242412
BCEN331271 ncbi Burkholderia cenocepacia AU 105412
BCAN483179 ncbi Brucella canis ATCC 2336511
BANT592021 ncbi Bacillus anthracis A024813
BANT568206 ncbi Bacillus anthracis CDC 68413
BANT261594 ncbi Bacillus anthracis Ames Ancestor13
BANT260799 ncbi Bacillus anthracis Sterne13
BAMY326423 ncbi Bacillus amyloliquefaciens FZB4213
BAMB398577 ncbi Burkholderia ambifaria MC40-612
BAMB339670 ncbi Burkholderia ambifaria AMMD12
ASAL382245 ncbi Aeromonas salmonicida salmonicida A44913
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL0313
APLE416269 ncbi Actinobacillus pleuropneumoniae L2013
AHYD196024 Aeromonas hydrophila dhakensis13


Names of the homologs of the genes in the group in each of these orgs
  G7342   G7340   G6959   EG12517   EG12275   EG12028   EG11958   EG11646   EG10818   EG10817   EG10816   EG10815   EG10814   
YPSE349747 YPSIP31758_1507YPSIP31758_4029YPSIP31758_2306YPSIP31758_0147YPSIP31758_4100YPSIP31758_0008YPSIP31758_4029YPSIP31758_0008YPSIP31758_0008YPSIP31758_0007YPSIP31758_1509YPSIP31758_1507YPSIP31758_2466
YPSE273123 YPTB1522YPTB3806YPTB1689YPTB0127YPTB3889YPTB0008YPTB3806YPTB0008YPTB0008YPTB0007YPTB2535YPTB2537YPTB1523
YPES386656 YPDSF_1913YPDSF_3327YPDSF_1308YPDSF_3520YPDSF_3778YPDSF_1308YPDSF_3327YPDSF_0228YPDSF_0228YPDSF_3898YPDSF_1910YPDSF_1913YPDSF_1469
YPES377628 YPN_2095YPN_3612YPN_2308YPN_0059YPN_3683YPN_0008YPN_3612YPN_0008YPN_0008YPN_0007YPN_2093YPN_2095YPN_2471
YPES360102 YPA_1996YPA_3791YPA_1191YPA_0114YPA_4126YPA_0011YPA_3791YPA_0011YPA_0011YPA_0010YPA_1994YPA_1996YPA_0803
YPES349746 YPANGOLA_A1761YPANGOLA_A4097YPANGOLA_A0008YPANGOLA_A0475YPANGOLA_A4157YPANGOLA_A0008YPANGOLA_A4097YPANGOLA_A0008YPANGOLA_A0008YPANGOLA_A0007YPANGOLA_A1759YPANGOLA_A1761YPANGOLA_A3018
YPES214092 YPO2501YPO3963YPO1816YPO3908YPO4036YPO0008YPO3963YPO0008YPO0008YPO0007YPO2499YPO2501YPO1508
YPES187410 Y1687Y3866Y2491Y0328Y4055Y0008Y3866Y0008Y0008Y0007Y1689Y1687Y2661
YENT393305 YE2815YE0010YE2605YE0141YE4120YE0012YE0010YE0012YE0012YE0008YE0010YE0011YE0009
VVUL216895 VV2_0064VV2_0063VV2_0065VV2_0064VV2_0062VV2_0065VV2_0063VV2_0065VV2_0065VV2_0061VV2_0063VV2_0064VV2_0062
VVUL196600 VVA0571VVA0570VVA0572VVA0571VVA0569VVA0572VVA0570VVA0572VVA0572VVA0568VVA0570VVA0571VVA0569
VPAR223926 VPA1084VPA1085VPA1083VPA1084VPA1086VPA1083VPA1085VPA1083VPA1083VPA1087VPA1085VPA1084VPA1086
VFIS312309 VF1447VF1446VF1448VF1447VF1445VF1448VF1446VF1448VF1448VF1444VF1446VF1447VF1445
VEIS391735 VEIS_1480VEIS_3417VEIS_3416VEIS_2026VEIS_0738VEIS_2045VEIS_3559VEIS_2130VEIS_2045VEIS_2682VEIS_1088
VCHO345073 VC0395_0008VC0395_0009VC0395_0007VC0395_0008VC0395_0010VC0395_0007VC0395_0009VC0395_0007VC0395_0011VC0395_0009VC0395_0008VC0395_0010
VCHO VCA0130VCA0129VCA0131VCA0130VCA0128VCA0131VCA0129VCA0131VCA0127VCA0129VCA0130VCA0128
TTEN273068 TTE0765TTE0205TTE0202TTE0206TTE0204TTE0326TTE0764TTE0326TTE0202TTE0203TTE0205TTE0206TTE0204
TSP1755 TETH514_0166TETH514_0158TETH514_0162TETH514_0166TETH514_0157TETH514_0258TETH514_0165TETH514_0258TETH514_0162TETH514_0163TETH514_0165TETH514_0166TETH514_0164
TPSE340099 TETH39_2038TETH39_2039TETH39_1972TETH39_2038TETH39_2040TETH39_1953TETH39_2039TETH39_1953TETH39_2042TETH39_2041TETH39_2039TETH39_2038TETH39_2040
TMAR243274 TM_0958TM_0955TM_0960TM_0958TM_0956TM_0955TM_0960TM_0959TM_0955TM_0958TM_0956
TLET416591 TLET_0359TLET_0389TLET_1327TLET_2030TLET_0185TLET_0187TLET_1905TLET_0189TLET_1328TLET_1325TLET_1327
STYP99287 STM2190STM3883STM3885STM3884STM3882STM3885STM3883STM3547STM3885STM3881STM3883STM3884STM3882
SSON300269 SSO_2631SSO_2629SSO_3922SSO_4409SSO_3919SSO_2216SSO_3920SSO_2222SSO_3922SSO_3918SSO_3920SSO_4409SSO_3919
SPRO399741 SPRO_4229SPRO_4227SPRO_0059SPRO_4768SPRO_0100SPRO_4897SPRO_4899SPRO_4897SPRO_4897SPRO_4901SPRO_4899SPRO_4898SPRO_4900
SPEA398579 SPEA_0517SPEA_0516SPEA_0518SPEA_0517SPEA_0515SPEA_2951SPEA_0516SPEA_2951SPEA_0518SPEA_0514SPEA_0516SPEA_0517SPEA_0515
SMEL266834 SMB21377SMB21375SMC02846SMB21587SMB20894SMC00473SMC02772SMC00473SMC01103SMB20352SMB21345SMC02325
SMED366394 SMED_4769SMED_4767SMED_4013SMED_4908SMED_4474SMED_4013SMED_5745SMED_0052SMED_3767SMED_4740SMED_0226
SHIGELLA MGLBYPHDS1566XYLGYEIIRBSCYEICRBSKRBSDRBSCMGLA
SHAL458817 SHAL_0581SHAL_0580SHAL_0582SHAL_0581SHAL_0579SHAL_3041SHAL_0580SHAL_3041SHAL_0582SHAL_0578SHAL_0580SHAL_0581SHAL_0579
SFLE373384 SFV_2596SFV_2594SFV_1443SFV_3973SFV_2235SFV_3749SFV_2241SFV_3747SFV_3752SFV_3749SFV_3973
SFLE198214 AAN43756.1AAN44091.1AAN43048.1AAN45681.1AAN45060.1AAN43764.1AAN45272.1AAN43770.1AAN45273.1AAN45269.1AAN45272.1AAN43755.1
SERY405948 SACE_5660SACE_5660SACE_3234SACE_5660SACE_5659SACE_3234SACE_1882SACE_1271SACE_1271SACE_5660SACE_5660SACE_5659
SENT454169 SEHA_C2425SEHA_C4216SEHA_C4218SEHA_C4217SEHA_C4215SEHA_C4218SEHA_C4216SEHA_C3859SEHA_C4218SEHA_C4214SEHA_C4216SEHA_C4217SEHA_C4215
SENT321314 SCH_2206SCH_3796SCH_1311SCH_3797SCH_3795SCH_3798SCH_3796SCH_3477SCH_3798SCH_3794SCH_3796SCH_3797SCH_3795
SENT220341 STY2424STY3895STY3892STY3894STY3896STY3892STY3895STY4264STY3892STY3897STY3895STY3894STY3896
SENT209261 T0665T3636T3634T3635T3637T3634T3636T3974T3634T3638T3636T3635T3637
SCO SCO2747SCO2747SCO2748SCO2747SCO2405SCO2748SCO2747SCO2748SCO2748SCO2749SCO2747SCO2747SCO2746
SBOY300268 SBO_2574SBO_2572SBO_3766SBO_4218SBO_3575SBO_2167SBO_3764SBO_2167SBO_3766SBO_3762SBO_3764SBO_4218SBO_3575
SAVE227882 SAV971SAV1827SAV5317SAV971SAV5768SAV5317SAV5318SAV5317SAV5317SAV5316SAV5318SAV5318SAV7416
RXYL266117 RXYL_0948RXYL_1889RXYL_0948RXYL_0946RXYL_0949RXYL_3002RXYL_0491RXYL_0949RXYL_0950RXYL_0947RXYL_0948RXYL_0946
RSOL267608 RSC1017RSP1635RSP1184RSC1241RSP1634RSC1013RSC1013RSC1013RSC1243RSC1017RSC1242
RLEG216596 PRL90225PRL90223RL2747RL2376RL3616PRL120174RL1746PRL120174RL2747RL1746RL2721RL4654
RETL347834 RHE_CH02400RHE_CH03189RHE_CH02085RHE_CH03164RHE_CH02324RHE_CH01211RHE_CH02324RHE_PC00098RHE_PF00034RHE_CH00612RHE_CH03989
PSYR223283 PSPTO_2399PSPTO_2371PSPTO_3490PSPTO_3004PSPTO_3488PSPTO_2371PSPTO_2371PSPTO_2372PSPTO_3488PSPTO_2399PSPTO_3489
PSYR205918 PSYR_0776PSYR_2570PSYR_2155PSYR_3265PSYR_2885PSYR_4487PSYR_2570PSYR_2155PSYR_2155PSYR_2156PSYR_2570PSYR_2151PSYR_3264
PSP117 RB5973RB3497RB3499RB3493RB3496RB3499RB3497RB3499RB3499RB3491RB3497RB3493RB3496
PPRO298386 PBPRB1559PBPRB1558PBPRB1560PBPRB1559PBPRA0463PBPRB1560PBPRB1558PBPRB1560PBPRB1560PBPRB1556PBPRB1558PBPRB1559PBPRB1557
PMUL272843 PM1325PM0154PM0152PM0153PM0155PM0152PM0154PM0152PM0152PM0156PM0154PM0153PM0155
PMOB403833 PMOB_0923PMOB_1602PMOB_0025PMOB_0923PMOB_0921PMOB_0899PMOB_1602PMOB_0899PMOB_0924PMOB_0920PMOB_0922PMOB_0923
PLUM243265 PLU0057PLU0059PLU0058PLU0056PLU4352PLU0057PLU4352PLU0059PLU0055PLU0057PLU0058PLU0056
PING357804 PING_0343PING_0342PING_0344PING_0343PING_0341PING_0344PING_0342PING_0344PING_0344PING_0340PING_0342PING_0343PING_0341
PFLU220664 PFL_2593PFL_2719PFL_2593PFL_2594PFL_2105PFL_2595PFL_2105PFL_2105PFL_2106PFL_2595PFL_2101PFL_2594
PFLU216595 PFLU3727PFLU2714PFLU2583PFLU2299PFLU4156PFLU3994PFLU4156PFLU4156PFLU4155PFLU3994PFLU3996PFLU2584
PFLU205922 PFL_1919PFL_2902PFL_1919PFL_2301PFL_1923PFL_4139PFL_1923PFL_1923PFL_1924PFL_1919PFL_4140
OIHE221109 OB2572OB2573OB2213OB2572OB2574OB2576OB2573OB2576OB2576OB2575OB2573OB2572OB2574
OANT439375 OANT_0292OANT_0290OANT_4060OANT_1418OANT_3415OANT_4066OANT_4447OANT_4447OANT_4066OANT_0292OANT_3347
MSUC221988 MS1612MS0199MS0283MS1612MS0062MS0283MS0199MS0283MS0283MS0199MS1612MS0062
MSP400668 MMWYL1_3110MMWYL1_1867MMWYL1_4169MMWYL1_3535MMWYL1_1866MMWYL1_4169MMWYL1_3108MMWYL1_4169MMWYL1_1534MMWYL1_1987MMWYL1_3110
MLOT266835 MLL7668MLL1013MLL5335MLL1012MLL5657MLL0029MLL2145MLL0029MLR8492MLL7011MLL1012MLL3598
LLAC272623 L82310L83296L0021L82310L84240L83296L86157L86157L85737L83296L82310L84240
LCAS321967 LSEI_0310LSEI_0309LSEI_0312LSEI_0310LSEI_0309LSEI_0312LSEI_0312LSEI_0307LSEI_0309LSEI_0310LSEI_0308
LACI272621 LBA1481LBA0587LBA1481LBA1483LBA1485LBA1482LBA1485LBA0587LBA1484LBA1482LBA1481LBA1483
KPNE272620 GKPORF_B0794GKPORF_B3497GKPORF_B3265GKPORF_B3984GKPORF_B3283GKPORF_B3499GKPORF_B3497GKPORF_B3499GKPORF_B3499GKPORF_B3495GKPORF_B3497GKPORF_B3498GKPORF_B3496
HSOM228400 HSM_0556HSM_0091HSM_0093HSM_0092HSM_0934HSM_0093HSM_0558HSM_0093HSM_0093HSM_0089HSM_0091HSM_0092HSM_0090
HSOM205914 HS_0767HS_0584HS_0225HS_1581HS_0585HS_0225HS_0584HS_0225HS_0225HS_0223HS_0769HS_0767
HMOD498761 HM1_2420HM1_2416HM1_2420HM1_2418HM1_2416HM1_2419HM1_2416HM1_2416HM1_2417HM1_2419HM1_2420HM1_2418
HINF71421 HI_0504HI_0503HI_0505HI_0504HI_1110HI_0505HI_0503HI_0505HI_0505HI_0501HI_0503HI_0504HI_0502
HINF374930 CGSHIEE_00470CGSHIEE_06515CGSHIEE_00465CGSHIEE_00470CGSHIEE_00480CGSHIEE_00465CGSHIEE_00475CGSHIEE_00465CGSHIEE_00465CGSHIEE_00485CGSHIEE_00475CGSHIEE_00470CGSHIEE_00480
HINF281310 NTHI0632NTHI0631NTHI0633NTHI0632NTHI0630NTHI0633NTHI0631NTHI0633NTHI0633NTHI0629NTHI0631NTHI0632NTHI0630
GTHE420246 GTNG_3170GTNG_3171GTNG_1486GTNG_3170GTNG_1800GTNG_1231GTNG_3171GTNG_1231GTNG_3174GTNG_3173GTNG_3171GTNG_3170GTNG_3172
GKAU235909 GK1896GK3227GK1957GK3226GK1880GK1372GK3227GK1372GK3230GK3229GK3227GK3226GK3228
ESP42895 ENT638_2750ENT638_4114ENT638_0169ENT638_0412ENT638_0289ENT638_4112ENT638_0288ENT638_4112ENT638_4112ENT638_4116ENT638_4114ENT638_4113ENT638_4115
EFER585054 EFER_2518EFER_4049EFER_3552EFER_4306EFER_4048EFER_2245EFER_4284EFER_2252EFER_4051EFER_4047EFER_4049EFER_4050EFER_4048
ECOO157 YPHFYPHDZ2810YTFQXYLGYEIIZ5690YEICRBSKRBSDRBSCRBSBRBSA
ECOL83334 ECS3414ECS3412ECS2481ECS5205ECS4450ECS3052ECS5072ECS3058ECS4694ECS4690ECS4692ECS4693ECS4691
ECOL585397 ECED1_2975ECED1_2973ECED1_1976ECED1_5084ECED1_4439ECED1_2609ECED1_4820ECED1_2614ECED1_4442ECED1_4438ECED1_4440ECED1_4441ECED1_4439
ECOL585057 ECIAI39_2751ECIAI39_2749ECIAI39_1281ECIAI39_4698ECIAI39_4079ECIAI39_4226ECIAI39_4510ECIAI39_2306ECIAI39_4357ECIAI39_4353ECIAI39_4355ECIAI39_4356ECIAI39_4354
ECOL585056 ECUMN_2868ECUMN_2866ECUMN_2061ECUMN_4761ECUMN_4078ECUMN_2496ECUMN_4280ECUMN_2502ECUMN_4282ECUMN_4278ECUMN_4280ECUMN_4281ECUMN_4279
ECOL585055 EC55989_2834EC55989_2832EC55989_1941EC55989_4786EC55989_4022EC55989_2413EC55989_4225EC55989_2419EC55989_4227EC55989_4223EC55989_4225EC55989_4226EC55989_4224
ECOL585035 ECS88_2718ECS88_2716ECS88_1824ECS88_4818ECS88_3985ECS88_2309ECS88_4172ECS88_2314ECS88_4174ECS88_4170ECS88_4172ECS88_4173ECS88_4171
ECOL585034 ECIAI1_2601ECIAI1_2599ECIAI1_1835ECIAI1_4460ECIAI1_3732ECIAI1_2240ECIAI1_3934ECIAI1_2246ECIAI1_3936ECIAI1_3932ECIAI1_3934ECIAI1_3935ECIAI1_3933
ECOL481805 ECOLC_1129ECOLC_1131ECOLC_1860ECOLC_3783ECOLC_0147ECOLC_1488ECOLC_3940ECOLC_1482ECOLC_4242ECOLC_4246ECOLC_4244ECOLC_4243ECOLC_4245
ECOL469008 ECBD_1136ECBD_1138ECBD_1872ECBD_3806ECBD_4281ECBD_1498ECBD_3944ECBD_1492ECBD_4278ECBD_4280ECBD_4279ECBD_4281
ECOL439855 ECSMS35_2701ECSMS35_2699ECSMS35_1419ECSMS35_4705ECSMS35_3890ECSMS35_2307ECSMS35_4552ECSMS35_2313ECSMS35_4120ECSMS35_4116ECSMS35_4118ECSMS35_4119ECSMS35_4117
ECOL413997 ECB_02440ECB_02438ECB_01741ECB_04096ECB_03635ECB_02089ECB_03958ECB_02095ECB_03638ECB_03634ECB_03636ECB_03637ECB_03635
ECOL409438 ECSE_2835ECSE_2833ECSE_1943ECSE_4533ECSE_3842ECSE_2428ECSE_4384ECSE_2434ECSE_4042ECSE_4038ECSE_4040ECSE_4041ECSE_4039
ECOL405955 APECO1_3983APECO1_3985APECO1_841APECO1_2164APECO1_2882APECO1_4392APECO1_2364APECO1_4388APECO1_2711APECO1_2715APECO1_2713APECO1_2712APECO1_2714
ECOL364106 UTI89_C2867UTI89_C2865UTI89_C1968UTI89_C4832UTI89_C4108UTI89_C2435UTI89_C4305UTI89_C2440UTI89_C4307UTI89_C4303UTI89_C4305UTI89_C4306UTI89_C4304
ECOL362663 ECP_2549ECP_2547ECP_1720ECP_4477ECP_3670ECP_2200ECP_3344ECP_2206ECP_3952ECP_3947ECP_3671ECP_3951ECP_3948
ECOL331111 ECE24377A_2833ECE24377A_2831ECE24377A_1996ECE24377A_4797ECE24377A_4063ECE24377A_2463ECE24377A_4266ECE24377A_2463ECE24377A_4268ECE24377A_4264ECE24377A_4266ECE24377A_4267ECE24377A_4265
ECOL316407 ECK2545:JW2532:B2548ECK2543:JW2530:B2546ECK1770:JW5289:B1772ECK4223:JW4186:B4227ECK3556:JW3539:B3567ECK2153:JW2147:B2160ECK4079:JW4047:B4086ECK2159:JW2153:B2166ECK3746:JW3731:B3752ECK3742:JW5857:B3748ECK3744:JW3729:B3750ECK3745:JW3730:B3751ECK3743:JW3728:B3749
ECOL199310 C3070C3068C2176C5325C4387C2695C5092C2701C4680C4676C4678C4679C4677
ECAR218491 ECA0012ECA0014ECA4236ECA0099ECA0014ECA1461ECA0014ECA0014ECA0010ECA0012ECA0013ECA0011
DRED349161 DRED_2522DRED_2526DRED_2522DRED_2524DRED_2526DRED_2523DRED_2526DRED_2526DRED_2525DRED_2523DRED_2522DRED_2524
CVIO243365 CV_3016CV_3017CV_3016CV_3018CV_3017CV_3020CV_3020CV_3019CV_3017CV_3016CV_3018
CTET212717 CTC_00907CTC_00906CTC_00909CTC_02347CTC_02350CTC_00909CTC_02349CTC_00909CTC_00909CTC_02351CTC_02349CTC_02347CTC_02350
CNOV386415 NT01CX_0162NT01CX_0163NT01CX_0166NT01CX_0162NT01CX_0164NT01CX_0163NT01CX_0166NT01CX_0166NT01CX_0165NT01CX_0163NT01CX_0162NT01CX_0164
CDIF272563 CD0300CD1588CD1589CD0301CD0299CD1588CD0299CD0299CD0302CD0300CD0301
CBOT515621 CLJ_B1315CLJ_B1313CLJ_B1315CLJ_B1312CLJ_B1209CLJ_B1313CLJ_B1209CLJ_B1671CLJ_B1313CLJ_B1315CLJ_B1312
CBOT508765 CLL_A1530CLL_A1527CLL_A1531CLL_A1529CLL_A3001CLL_A1530CLL_A3004CLL_A1527CLL_A1528CLL_A1530CLL_A1531CLL_A1529
BXEN266265 BXE_B0573BXE_B1397BXE_C1282BXE_B0573BXE_B2620BXE_C1282BXE_B1397BXE_C1282BXE_B0576BXE_C1349BXE_B0894BXE_C1350
BWEI315730 BCERKBAB4_0583BCERKBAB4_0582BCERKBAB4_0583BCERKBAB4_0581BCERKBAB4_0579BCERKBAB4_0582BCERKBAB4_0579BCERKBAB4_0579BCERKBAB4_0580BCERKBAB4_0582BCERKBAB4_0583BCERKBAB4_0581
BVIE269482 BCEP1808_1558BCEP1808_3838BCEP1808_1677BCEP1808_6552BCEP1808_6448BCEP1808_1562BCEP1808_1507BCEP1808_1562BCEP1808_1423BCEP1808_3381BCEP1808_1558BCEP1808_1389
BTHU412694 BALH_0612BALH_0611BALH_0688BALH_0612BALH_0609BALH_0611BALH_0607BALH_0607BALH_0608BALH_0611BALH_0612BALH_0609
BTHU281309 BT9727_0580BT9727_0579BT9727_0666BT9727_0580BT9727_0578BT9727_0576BT9727_0579BT9727_0576BT9727_0576BT9727_0577BT9727_0579BT9727_0580BT9727_0578
BTHA271848 BTH_I2475BTH_I2433BTH_I2296BTH_I2342BTH_I2340BTH_I2471BTH_I2433BTH_I2471BTH_I2471BTH_I2433BTH_I2435BTH_II0211
BSUI470137 BSUIS_B0991BSUIS_A1690BSUIS_A0170BSUIS_A1689BSUIS_B0929BSUIS_A1690BSUIS_B0007BSUIS_B0007BSUIS_A1690BSUIS_B0850BSUIS_A1691
BSUI204722 BR_A0996BR_1631BR_0169BR_1630BR_A1151BR_1631BR_A0005BR_A0005BR_1631BR_A0858BR_1632
BSUB BSU35960BSU35950BSU22110BSU35960BSU35940BSU35920BSU35950BSU35920BSU35920BSU35930BSU35950BSU35960BSU35940
BSP36773 BCEP18194_A4745BCEP18194_B0047BCEP18194_A5029BCEP18194_B2371BCEP18194_A4683BCEP18194_C7623BCEP18194_B0886BCEP18194_C7623BCEP18194_C7623BCEP18194_B0886BCEP18194_B0884BCEP18194_A4569
BPUM315750 BPUM_3268BPUM_3267BPUM_3244BPUM_3268BPUM_3266BPUM_3264BPUM_3267BPUM_3264BPUM_3264BPUM_3265BPUM_3267BPUM_3268BPUM_3266
BPSE320373 BURPS668_1853BURPS668_2096BURPS668_A0457BURPS668_A0286BURPS668_1858BURPS668_1909BURPS668_1858BURPS668_1858BURPS668_1909BURPS668_1907BURPS668_A0286
BPSE320372 BURPS1710B_A2179BURPS1710B_A2486BURPS1710B_B2112BURPS1710B_B1956BURPS1710B_A2184BURPS1710B_A2230BURPS1710B_A2184BURPS1710B_A2184BURPS1710B_A2230BURPS1710B_A2228BURPS1710B_B1956
BPSE272560 BPSL1834BPSL1575BPSS0257BPSS0142BPSL1830BPSL1791BPSL1830BPSL1830BPSL1791BPSL1793BPSS0142
BLIC279010 BL02443BL02442BL02471BL02443BL01747BL02439BL02442BL02439BL02439BL02440BL02442BL02443BL02441
BHAL272558 BH3901BH3731BH3724BH3732BH3441BH3731BH3728BH3729BH3731BH3732BH3730
BCLA66692 ABC3545ABC3352ABC3544ABC0410ABC1270ABC3545ABC3643ABC3548ABC3547ABC3545ABC3544ABC3546
BCER572264 BCA_0707BCA_0706BCA_0819BCA_0707BCA_0705BCA_0706BCA_0703BCA_0703BCA_0704BCA_0706BCA_0707BCA_0705
BCER405917 BCE_0737BCE_0736BCE_0737BCE_0735BCE_0733BCE_0736BCE_0733BCE_0733BCE_0734BCE_0736BCE_0737BCE_0735
BCER315749 BCER98_0564BCER98_0563BCER98_0564BCER98_0562BCER98_0560BCER98_0563BCER98_0560BCER98_0560BCER98_0561BCER98_0563BCER98_0564BCER98_0562
BCER288681 BCE33L0579BCE33L0578BCE33L0579BCE33L0577BCE33L0575BCE33L0578BCE33L0575BCE33L0575BCE33L0576BCE33L0578BCE33L0579BCE33L0577
BCEN331272 BCEN2424_1606BCEN2424_5639BCEN2424_1733BCEN2424_5992BCEN2424_6737BCEN2424_1733BCEN2424_4818BCEN2424_6126BCEN2424_6126BCEN2424_4818BCEN2424_4820BCEN2424_1425
BCEN331271 BCEN_1126BCEN_5220BCEN_6346BCEN_5627BCEN_6503BCEN_6346BCEN_3549BCEN_5761BCEN_5761BCEN_3549BCEN_3547BCEN_0943
BCAN483179 BCAN_B1015BCAN_A1668BCAN_A0174BCAN_A1667BCAN_B1180BCAN_A1668BCAN_B0007BCAN_B0007BCAN_A1668BCAN_B0875BCAN_A1669
BANT592021 BAA_0753BAA_0752BAA_0860BAA_0753BAA_0751BAA_0749BAA_0752BAA_0749BAA_0749BAA_0750BAA_0752BAA_0753BAA_0751
BANT568206 BAMEG_3917BAMEG_3918BAMEG_3806BAMEG_3917BAMEG_3919BAMEG_3921BAMEG_3918BAMEG_3921BAMEG_3921BAMEG_3920BAMEG_3918BAMEG_3917BAMEG_3919
BANT261594 GBAA0669GBAA0668GBAA0752GBAA0669GBAA0667GBAA0665GBAA0668GBAA0665GBAA0665GBAA0666GBAA0668GBAA0669GBAA0667
BANT260799 BAS0636BAS0635BAS0716BAS0636BAS0634BAS0632BAS0635BAS0632BAS0632BAS0633BAS0635BAS0636BAS0634
BAMY326423 RBAM_033130RBAM_033120RBAM_033090RBAM_033130RBAM_033110RBAM_033090RBAM_033120RBAM_033090RBAM_033090RBAM_033100RBAM_033120RBAM_033130RBAM_033110
BAMB398577 BAMMC406_1522BAMMC406_1253BAMMC406_1654BAMMC406_5924BAMMC406_6035BAMMC406_1383BAMMC406_4722BAMMC406_1383BAMMC406_1383BAMMC406_4722BAMMC406_4724BAMMC406_1344
BAMB339670 BAMB_1503BAMB_6336BAMB_1654BAMB_6193BAMB_6335BAMB_1343BAMB_4199BAMB_1343BAMB_1343BAMB_4199BAMB_4201BAMB_4447
ASAL382245 ASA_1968ASA_1969ASA_1967ASA_2140ASA_0215ASA_0900ASA_1969ASA_0900ASA_1967ASA_1971ASA_1969ASA_1968ASA_2395
APLE434271 APJL_1703APJL_1702APJL_1037APJL_1703APJL_1957APJL_1704APJL_1702APJL_1704APJL_1704APJL_1700APJL_1702APJL_1703APJL_1701
APLE416269 APL_1672APL_1671APL_1019APL_1672APL_1910APL_1673APL_1671APL_1673APL_1673APL_1669APL_1671APL_1672APL_1670
AHYD196024 AHA_2312AHA_2311AHA_2313AHA_2312AHA_2310AHA_3406AHA_2311AHA_3406AHA_2313AHA_2309AHA_2311AHA_2312AHA_2310


Organism features enriched in list (features available for 128 out of the 135 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.001852936112
Disease:Anthrax 0.002239244
Disease:Bubonic_plague 0.000102166
Disease:Dysentery 0.002265056
Disease:Gastroenteritis 0.00002801013
Endospores:No 2.437e-625211
Endospores:Yes 1.619e-72853
GC_Content_Range4:0-40 0.000029728213
GC_Content_Range4:40-60 8.696e-875224
GC_Content_Range7:30-40 0.000864923166
GC_Content_Range7:40-50 0.007179835117
GC_Content_Range7:50-60 0.000024040107
Genome_Size_Range5:0-2 1.242e-135155
Genome_Size_Range5:2-4 0.000079326197
Genome_Size_Range5:4-6 6.891e-1273184
Genome_Size_Range5:6-10 3.241e-62447
Genome_Size_Range9:1-2 3.148e-105128
Genome_Size_Range9:2-3 0.000664414120
Genome_Size_Range9:4-5 0.00006373696
Genome_Size_Range9:5-6 2.066e-63788
Genome_Size_Range9:6-8 0.00005641938
Gram_Stain:Gram_Neg 0.000213790333
Habitat:Aquatic 0.00188551091
Habitat:Host-associated 0.002992233206
Habitat:Multiple 0.000129656178
Habitat:Terrestrial 0.00055551531
Motility:No 1.394e-99151
Motility:Yes 1.822e-784267
Oxygen_Req:Aerobic 0.009966531185
Oxygen_Req:Anaerobic 0.008505814102
Oxygen_Req:Facultative 1.372e-1075201
Pathogenic_in:Animal 0.00858802266
Pathogenic_in:Human 0.000611962213
Pathogenic_in:No 0.000827135226
Shape:Coccus 6.920e-9182
Shape:Rod 1.485e-15113347



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ORGANISMS CONTAINING AT MOST 2 GENES FROM THE GROUP:

Total number of orgs: 345
Effective number of orgs (counting one per cluster within 468 clusters): 277

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A1
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110181
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103311
XFAS405440 ncbi Xylella fastidiosa M121
XFAS183190 ncbi Xylella fastidiosa Temecula11
XFAS160492 ncbi Xylella fastidiosa 9a5c1
XCAM487884 Xanthomonas campestris pv. paulliniae1
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-101
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80041
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339131
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3061
XAUT78245 ncbi Xanthobacter autotrophicus Py21
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/271
TWHI203267 ncbi Tropheryma whipplei Twist1
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE262724 ncbi Thermus thermophilus HB272
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TFUS269800 ncbi Thermobifida fusca YX2
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-21
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STRO369723 ncbi Salinispora tropica CNB-4402
STOK273063 ncbi Sulfolobus tokodaii 71
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93111
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)2
SSP321327 ncbi Synechococcus sp. JA-3-3Ab2
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96051
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F12
SLAC55218 Ruegeria lacuscaerulensis2
SGOR29390 Streptococcus gordonii Challis1
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2172
SDEG203122 ncbi Saccharophagus degradans 2-402
SARE391037 ncbi Salinispora arenicola CNS-2052
SALA317655 ncbi Sphingopyxis alaskensis RB22561
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPAL316058 ncbi Rhodopseudomonas palustris HaA21
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316056 ncbi Rhodopseudomonas palustris BisB181
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RPAL258594 ncbi Rhodopseudomonas palustris CGA0091
RMET266264 ncbi Ralstonia metallidurans CH341
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.1
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PRUM264731 ncbi Prevotella ruminicola 232
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96011
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT31
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PCRY335284 ncbi Psychrobacter cryohalolentis K51
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PATL342610 ncbi Pseudoalteromonas atlantica T6c2
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135142
PARC259536 ncbi Psychrobacter arcticus 273-41
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM51
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-21
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X141
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101521
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-12
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H2
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30911
MSP409 Methylobacterium sp.2
MSED399549 ncbi Metallosphaera sedula DSM 53482
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP2
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-11
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2321
MHYO262722 ncbi Mycoplasma hyopneumoniae 74481
MHYO262719 ncbi Mycoplasma hyopneumoniae J1
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK2
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MFLA265072 ncbi Methylobacillus flagellatus KT1
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath1
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1042
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53342
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LMON265669 ncbi Listeria monocytogenes 4b F23652
LMON169963 ncbi Listeria monocytogenes EGD-e2
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112622
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
JSP375286 ncbi Janthinobacterium sp. Marseille0
ILOI283942 ncbi Idiomarina loihiensis L2TR1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HNEP81032 Hyphomonas neptunium2
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba1
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA1
GOXY290633 ncbi Gluconobacter oxydans 621H2
GMET269799 ncbi Geobacter metallireducens GS-150
GFOR411154 ncbi Gramella forsetii KT08031
GBET391165 ncbi Granulibacter bethesdensis CGDNIH12
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255862
FMAG334413 ncbi Finegoldia magna ATCC 293281
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a1
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DETH243164 ncbi Dehalococcoides ethenogenes 1951
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.1
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC31964 ncbi Clavibacter michiganensis sepedonicus2
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF82
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4111
CJAP155077 Cellvibrio japonicus1
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29012
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1111
CBUR360115 ncbi Coxiella burnetii RSA 3311
CBUR227377 ncbi Coxiella burnetii RSA 4931
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1351
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPET94624 Bordetella petrii1
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi1
BFRA295405 ncbi Bacteroides fragilis YCH462
BFRA272559 ncbi Bacteroides fragilis NCTC 93432
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B312
BBRO257310 ncbi Bordetella bronchiseptica RB501
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1001
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K11
AORE350688 ncbi Alkaliphilus oremlandii OhILAs2
ANAE240017 Actinomyces oris MG12
AMAR329726 ncbi Acaryochloris marina MBIC110171
AMAR234826 ncbi Anaplasma marginale St. Maries0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43042
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C1
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N0
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7342   G7340   G6959   EG12517   EG12275   EG12028   EG11958   EG11646   EG10818   EG10817   EG10816   EG10815   EG10814   
ZMOB264203
XORY360094 XOOORF_1122
XORY342109 XOO3565
XORY291331 XOO3785
XFAS405440 XFASM12_1863
XFAS183190 PD_1698
XFAS160492 XF0366
XCAM487884 XCC-B100_3589
XCAM316273 XCAORF_0942
XCAM314565 XC_3468
XCAM190485 XCC0764
XAXO190486 XAC0818
XAUT78245 XAUT_2413
WSUC273121
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX2669
TWHI218496 TW0417
TWHI203267 TW330
TVOL273116
TTUR377629
TTHE262724 TT_C0063TT_C0063
TPAL243276
TKOD69014 TK1843
TFUS269800 TFU_0189TFU_0259
TELO197221 TLL1428
TDEN326298
TDEN292415
TDEN243275
TCRU317025 TCR_0505
TACI273075
SWOL335541 SWOL_1264
STRO369723 STROP_1202STROP_1202
STOK273063 ST2328
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471 GSYN0113
SSP387093
SSP321332 CYB_1353CYB_1353
SSP321327 CYA_2257CYA_2257
SSP1148
SSP1131 SYNCC9605_0690
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550 SMAR_0007SMAR_0007
SLAC55218 SL1157_2716SL1157_1099
SGOR29390 SGO_1897
SFUM335543
SELO269084
SDEN318161 SDEN_0939SDEN_0939
SDEG203122 SDE_3280SDE_0766
SARE391037 SARE_1094SARE_1094
SALA317655 SALA_2872
SACI56780
SACI330779 SACI_0272
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RPAL316058 RPB_0671
RPAL316057
RPAL316056 RPC_4851
RPAL316055 RPE_4816
RPAL258594 RPA4656
RMET266264 RMET_4769
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSTU379731
PSP56811 PSYCPRWF_1845
PSP312153
PRUM264731 GFRORF2271GFRORF2608
PMEN399739
PMAR93060 P9215_05871
PMAR74547 PMT1262
PMAR74546 PMT9312_0506
PMAR59920
PMAR167555
PMAR167546 P9301ORF_0545
PMAR167542
PMAR167540
PMAR167539
PMAR146891 A9601_05621
PLUT319225
PINT246198 PIN_A0148
PHOR70601 PH1459
PHAL326442
PGIN242619
PFUR186497
PCRY335284 PCRYO_2200
PCAR338963
PATL342610 PATL_4122PATL_3505
PAST100379
PARS340102 PARS_0078PARS_0078
PARC259536 PSYC_1910
PABY272844
OTSU357244
OCAR504832 OCAR_7547
NWIN323098
NSP387092 NIS_1448
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097 NHAM_0460
NGON242231
NFAR247156 NFA13700
NEUT335283
NEUR228410
NARO279238
MXAN246197
MVAN350058 MVAN_4016MVAN_3935
MTUB419947 MRA_2462
MTUB336982 TBFG_12463
MTHE349307
MTHE187420 MTH404MTH404
MTBRV RV2436
MTBCDC MT2511
MSYN262723
MSTA339860 MSP_0071
MSP409 M446_5850M446_3132
MSED399549 MSED_0185MSED_0185
MPUL272635 MYPU_3440MYPU_6000
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748 MMOB0140
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108 AMB4184
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358 MHP512
MHYO262722 MHP7448_0514
MHYO262719 MHJ_0512
MHUN323259
MGIL350054 MFLV_2602MFLV_2643
MGEN243273
MFLO265311 MFL642
MFLA265072 MFLA_2300
MEXT419610
MCAP340047
MCAP243233 MCA_0970
MBUR259564
MBOV410289 BCG_2455
MBOV233413 MB2462
MBAR269797
MAVI243243 MAV_0347MAV_0347
MART243272
MAQU351348
MAER449447
MAEO419665
MACE188937
MABS561007 MAB_1617C
LWEL386043 LWE2293LWE2293
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LMON265669 LMOF2365_2311LMOF2365_2311
LMON169963 LMO2341LMO2341
LINT363253
LINT267671
LINT189518
LINN272626 LIN2435LIN2435
LBOR355277
LBOR355276
LBIF456481 LEPBI_I0501
LBIF355278 LBF_0481
JSP375286
ILOI283942 IL0486
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963 JHP0792
HPYL357544 HPAG1_0841
HPY HP0858
HNEP81032 HNE_2419HNE_0207
HMUK485914
HMAR272569
HHEP235279
HHAL349124
HDUC233412
HBUT415426
HARS204773
HACI382638 HAC_1221
GURA351605
GSUL243231 GSU_2085
GOXY290633 GOX0612GOX2084
GMET269799
GFOR411154 GFO_0006
GBET391165 GBCGDNIH1_0400GBCGDNIH1_1810
FTUL458234
FTUL418136
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855 FRANEAN1_7032
FSP106370
FRANT
FNUC190304 FN1166FN1166
FMAG334413 FMG_1548
FJOH376686
FALN326424 FRAAL3962
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAN269484
DVUL882
DSP255470 CBDBA667
DSP216389 DEHABAV1_0646
DOLE96561
DNOD246195
DHAF138119
DETH243164 DET_0711
DDES207559
DARO159087
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSP78 CAUL_1363
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992
CMUR243161
CMIC31964 CMS0996CMS0201
CMET456442
CMAQ397948
CKOR374847 KCR_1208KCR_1208
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537 JK2077
CJAP155077 CJA_3019
CHYD246194 CHY_0076CHY_0076
CHUT269798
CHOM360107
CFET360106
CFEL264202
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922 COXBU7E912_0342
CBUR360115 COXBURSA331_A1838
CBUR227377 CBU_1655
CBLO291272
CBLO203907
CABO218497
BTUR314724 BT0630
BTRI382640
BSP107806
BQUI283165
BPET94624 BPET0876
BPER257313
BPAR257311
BHER314723
BHEN283166
BGAR290434 BG0651
BFRA295405 BF4375BF3339
BFRA272559 BF4173BF3174
BCIC186490
BBUR224326 BB_0630BB_0630
BBRO257310 BB2712
BBAC360095
BBAC264462 BD0720
BAPH372461
BAPH198804
BAFZ390236 BAPKO_0672
AYEL322098
AURANTIMONAS
ASP76114
ASP62928
ASP232721
APHA212042
APER272557 APE0012
AORE350688 CLOS_0651CLOS_0651
ANAE240017 ANA_0121ANA_1770
AMAR329726 AM1_4844
AMAR234826
AFUL224325 AF_0356AF_0356
AFER243159
AEHR187272
ADEH290397 ADEH_1304
ABUT367737
ABOR393595
ABAU360910
AAEO224324


Organism features enriched in list (features available for 321 out of the 345 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.0000205117
Arrangment:Pairs 5.359e-1131112
Disease:Pharyngitis 0.008118288
Disease:Wide_range_of_infections 0.00130371111
Disease:bronchitis_and_pneumonitis 0.008118288
Endospores:No 0.0005778134211
Endospores:Yes 1.492e-81053
GC_Content_Range4:0-40 0.0001085138213
GC_Content_Range4:40-60 0.0073938111224
GC_Content_Range7:30-40 0.0031353105166
GC_Content_Range7:50-60 0.003289847107
Genome_Size_Range5:0-2 1.066e-23136155
Genome_Size_Range5:4-6 1.096e-1262184
Genome_Size_Range5:6-10 3.353e-9747
Genome_Size_Range9:0-1 6.020e-82727
Genome_Size_Range9:1-2 5.035e-16109128
Genome_Size_Range9:4-5 4.495e-63396
Genome_Size_Range9:5-6 3.424e-62988
Genome_Size_Range9:6-8 3.545e-8538
Gram_Stain:Gram_Pos 9.780e-953150
Habitat:Aquatic 0.00023576591
Habitat:Host-associated 0.0002013133206
Habitat:Multiple 7.925e-869178
Habitat:Terrestrial 0.0005209831
Motility:Yes 0.0011807130267
Optimal_temp.:25-35 0.0002033114
Optimal_temp.:30-37 0.0007201318
Oxygen_Req:Anaerobic 0.002949968102
Oxygen_Req:Facultative 5.910e-1370201
Oxygen_Req:Microaerophilic 0.00195791618
Shape:Irregular_coccus 0.00047181617
Shape:Rod 3.385e-13149347
Shape:Sphere 0.00015291819
Shape:Spiral 2.080e-83334
Temp._range:Mesophilic 0.0071800250473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 46
Effective number of orgs (counting one per cluster within 468 clusters): 36

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
LACI272621 ncbi Lactobacillus acidophilus NCFM 5.100e-768412
CTET212717 ncbi Clostridium tetani E88 1.001e-6100213
PSP117 Pirellula sp. 2.115e-6106113
PMOB403833 ncbi Petrotoga mobilis SJ95 3.353e-680112
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 33223 0.0000105119913
LLAC272623 ncbi Lactococcus lactis lactis Il1403 0.000014990812
TSP1755 Thermoanaerobacter sp. 0.0000175124713
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB4 0.0000310130313
TLET416591 ncbi Thermotoga lettingae TMO 0.000094979911
SCO ncbi Streptomyces coelicolor A3(2) 0.0001196144513
CNOV386415 ncbi Clostridium novyi NT 0.0001280108912
SAVE227882 ncbi Streptomyces avermitilis MA-4680 0.0001564147513
TMAR243274 ncbi Thermotoga maritima MSB8 0.000164384111
OIHE221109 ncbi Oceanobacillus iheyensis HTE831 0.0001931149913
HINF374930 ncbi Haemophilus influenzae PittEE 0.0001965150113
BXEN266265 ncbi Burkholderia xenovorans LB400 0.0002020113212
HSOM228400 ncbi Haemophilus somnus 2336 0.0003475156813
HMOD498761 ncbi Heliobacterium modesticaldum Ice1 0.0003675119112
HINF281310 ncbi Haemophilus influenzae 86-028NP 0.0003806157913
BPUM315750 ncbi Bacillus pumilus SAFR-032 0.0004449159813
HINF71421 ncbi Haemophilus influenzae Rd KW20 0.0004672160413
GKAU235909 ncbi Geobacillus kaustophilus HTA426 0.0005626162713
LCAS321967 ncbi Lactobacillus casei ATCC 334 0.000609495111
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B 0.0006368124812
BAMY326423 ncbi Bacillus amyloliquefaciens FZB42 0.0006811165113
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-2 0.0007908167013
RXYL266117 ncbi Rubrobacter xylanophilus DSM 9941 0.0010007129712
BSUB ncbi Bacillus subtilis subtilis 168 0.0012252172713
BLIC279010 ncbi Bacillus licheniformis ATCC 14580 0.0014560175013
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-27 0.0014778175213
BANT260799 ncbi Bacillus anthracis Sterne 0.0015800176113
BANT261594 ncbi Bacillus anthracis Ames Ancestor 0.0016155176413
BANT568206 ncbi Bacillus anthracis CDC 684 0.0016395176613
BANT592021 ncbi Bacillus anthracis A0248 0.0018308178113
DRED349161 ncbi Desulfotomaculum reducens MI-1 0.0019331137212
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL03 0.0022277180813
APLE416269 ncbi Actinobacillus pleuropneumoniae L20 0.0023598181613
PMUL272843 ncbi Pasteurella multocida multocida Pm70 0.0025350182613
TPET390874 ncbi Thermotoga petrophila RKU-1 0.002559183410
SAGA211110 ncbi Streptococcus agalactiae NEM316 0.003659886610
PACN267747 ncbi Propionibacterium acnes KPA171202 0.003700186710
SERY405948 ncbi Saccharopolyspora erythraea NRRL 2338 0.0037786145312
SAGA208435 ncbi Streptococcus agalactiae 2603V/R 0.003781986910
SAGA205921 ncbi Streptococcus agalactiae A909 0.003823487010
HSOM205914 ncbi Haemophilus somnus 129PT 0.0067928152812
CGLU196627 ncbi Corynebacterium glutamicum ATCC 13032 0.008109094210


Names of the homologs of the genes in the group in each of these orgs
  G7342   G7340   G6959   EG12517   EG12275   EG12028   EG11958   EG11646   EG10818   EG10817   EG10816   EG10815   EG10814   
LACI272621 LBA1481LBA0587LBA1481LBA1483LBA1485LBA1482LBA1485LBA0587LBA1484LBA1482LBA1481LBA1483
CTET212717 CTC_00907CTC_00906CTC_00909CTC_02347CTC_02350CTC_00909CTC_02349CTC_00909CTC_00909CTC_02351CTC_02349CTC_02347CTC_02350
PSP117 RB5973RB3497RB3499RB3493RB3496RB3499RB3497RB3499RB3499RB3491RB3497RB3493RB3496
PMOB403833 PMOB_0923PMOB_1602PMOB_0025PMOB_0923PMOB_0921PMOB_0899PMOB_1602PMOB_0899PMOB_0924PMOB_0920PMOB_0922PMOB_0923
TPSE340099 TETH39_2038TETH39_2039TETH39_1972TETH39_2038TETH39_2040TETH39_1953TETH39_2039TETH39_1953TETH39_2042TETH39_2041TETH39_2039TETH39_2038TETH39_2040
LLAC272623 L82310L83296L0021L82310L84240L83296L86157L86157L85737L83296L82310L84240
TSP1755 TETH514_0166TETH514_0158TETH514_0162TETH514_0166TETH514_0157TETH514_0258TETH514_0165TETH514_0258TETH514_0162TETH514_0163TETH514_0165TETH514_0166TETH514_0164
TTEN273068 TTE0765TTE0205TTE0202TTE0206TTE0204TTE0326TTE0764TTE0326TTE0202TTE0203TTE0205TTE0206TTE0204
TLET416591 TLET_0359TLET_0389TLET_1327TLET_2030TLET_0185TLET_0187TLET_1905TLET_0189TLET_1328TLET_1325TLET_1327
SCO SCO2747SCO2747SCO2748SCO2747SCO2405SCO2748SCO2747SCO2748SCO2748SCO2749SCO2747SCO2747SCO2746
CNOV386415 NT01CX_0162NT01CX_0163NT01CX_0166NT01CX_0162NT01CX_0164NT01CX_0163NT01CX_0166NT01CX_0166NT01CX_0165NT01CX_0163NT01CX_0162NT01CX_0164
SAVE227882 SAV971SAV1827SAV5317SAV971SAV5768SAV5317SAV5318SAV5317SAV5317SAV5316SAV5318SAV5318SAV7416
TMAR243274 TM_0958TM_0955TM_0960TM_0958TM_0956TM_0955TM_0960TM_0959TM_0955TM_0958TM_0956
OIHE221109 OB2572OB2573OB2213OB2572OB2574OB2576OB2573OB2576OB2576OB2575OB2573OB2572OB2574
HINF374930 CGSHIEE_00470CGSHIEE_06515CGSHIEE_00465CGSHIEE_00470CGSHIEE_00480CGSHIEE_00465CGSHIEE_00475CGSHIEE_00465CGSHIEE_00465CGSHIEE_00485CGSHIEE_00475CGSHIEE_00470CGSHIEE_00480
BXEN266265 BXE_B0573BXE_B1397BXE_C1282BXE_B0573BXE_B2620BXE_C1282BXE_B1397BXE_C1282BXE_B0576BXE_C1349BXE_B0894BXE_C1350
HSOM228400 HSM_0556HSM_0091HSM_0093HSM_0092HSM_0934HSM_0093HSM_0558HSM_0093HSM_0093HSM_0089HSM_0091HSM_0092HSM_0090
HMOD498761 HM1_2420HM1_2416HM1_2420HM1_2418HM1_2416HM1_2419HM1_2416HM1_2416HM1_2417HM1_2419HM1_2420HM1_2418
HINF281310 NTHI0632NTHI0631NTHI0633NTHI0632NTHI0630NTHI0633NTHI0631NTHI0633NTHI0633NTHI0629NTHI0631NTHI0632NTHI0630
BPUM315750 BPUM_3268BPUM_3267BPUM_3244BPUM_3268BPUM_3266BPUM_3264BPUM_3267BPUM_3264BPUM_3264BPUM_3265BPUM_3267BPUM_3268BPUM_3266
HINF71421 HI_0504HI_0503HI_0505HI_0504HI_1110HI_0505HI_0503HI_0505HI_0505HI_0501HI_0503HI_0504HI_0502
GKAU235909 GK1896GK3227GK1957GK3226GK1880GK1372GK3227GK1372GK3230GK3229GK3227GK3226GK3228
LCAS321967 LSEI_0310LSEI_0309LSEI_0312LSEI_0310LSEI_0309LSEI_0312LSEI_0312LSEI_0307LSEI_0309LSEI_0310LSEI_0308
CBOT508765 CLL_A1530CLL_A1527CLL_A1531CLL_A1529CLL_A3001CLL_A1530CLL_A3004CLL_A1527CLL_A1528CLL_A1530CLL_A1531CLL_A1529
BAMY326423 RBAM_033130RBAM_033120RBAM_033090RBAM_033130RBAM_033110RBAM_033090RBAM_033120RBAM_033090RBAM_033090RBAM_033100RBAM_033120RBAM_033130RBAM_033110
GTHE420246 GTNG_3170GTNG_3171GTNG_1486GTNG_3170GTNG_1800GTNG_1231GTNG_3171GTNG_1231GTNG_3174GTNG_3173GTNG_3171GTNG_3170GTNG_3172
RXYL266117 RXYL_0948RXYL_1889RXYL_0948RXYL_0946RXYL_0949RXYL_3002RXYL_0491RXYL_0949RXYL_0950RXYL_0947RXYL_0948RXYL_0946
BSUB BSU35960BSU35950BSU22110BSU35960BSU35940BSU35920BSU35950BSU35920BSU35920BSU35930BSU35950BSU35960BSU35940
BLIC279010 BL02443BL02442BL02471BL02443BL01747BL02439BL02442BL02439BL02439BL02440BL02442BL02443BL02441
BTHU281309 BT9727_0580BT9727_0579BT9727_0666BT9727_0580BT9727_0578BT9727_0576BT9727_0579BT9727_0576BT9727_0576BT9727_0577BT9727_0579BT9727_0580BT9727_0578
BANT260799 BAS0636BAS0635BAS0716BAS0636BAS0634BAS0632BAS0635BAS0632BAS0632BAS0633BAS0635BAS0636BAS0634
BANT261594 GBAA0669GBAA0668GBAA0752GBAA0669GBAA0667GBAA0665GBAA0668GBAA0665GBAA0665GBAA0666GBAA0668GBAA0669GBAA0667
BANT568206 BAMEG_3917BAMEG_3918BAMEG_3806BAMEG_3917BAMEG_3919BAMEG_3921BAMEG_3918BAMEG_3921BAMEG_3921BAMEG_3920BAMEG_3918BAMEG_3917BAMEG_3919
BANT592021 BAA_0753BAA_0752BAA_0860BAA_0753BAA_0751BAA_0749BAA_0752BAA_0749BAA_0749BAA_0750BAA_0752BAA_0753BAA_0751
DRED349161 DRED_2522DRED_2526DRED_2522DRED_2524DRED_2526DRED_2523DRED_2526DRED_2526DRED_2525DRED_2523DRED_2522DRED_2524
APLE434271 APJL_1703APJL_1702APJL_1037APJL_1703APJL_1957APJL_1704APJL_1702APJL_1704APJL_1704APJL_1700APJL_1702APJL_1703APJL_1701
APLE416269 APL_1672APL_1671APL_1019APL_1672APL_1910APL_1673APL_1671APL_1673APL_1673APL_1669APL_1671APL_1672APL_1670
PMUL272843 PM1325PM0154PM0152PM0153PM0155PM0152PM0154PM0152PM0152PM0156PM0154PM0153PM0155
TPET390874 TPET_1794TPET_0812TPET_1794TPET_0809TPET_1793TPET_1789TPET_1791TPET_1793TPET_1794TPET_0809
SAGA211110 GBS0113GBS0114GBS0113GBS0115GBS0114GBS0117GBS0116GBS0114GBS0113GBS0115
PACN267747 PPA0016PPA1211PPA0017PPA1211PPA0016PPA1211PPA1211PPA0019PPA0016PPA0017
SERY405948 SACE_5660SACE_5660SACE_3234SACE_5660SACE_5659SACE_3234SACE_1882SACE_1271SACE_1271SACE_5660SACE_5660SACE_5659
SAGA208435 SAG_0114SAG_0115SAG_0114SAG_0116SAG_0115SAG_0118SAG_0117SAG_0115SAG_0114SAG_0116
SAGA205921 SAK_0166SAK_0167SAK_0166SAK_0168SAK_0167SAK_0170SAK_0169SAK_0167SAK_0166SAK_0168
HSOM205914 HS_0767HS_0584HS_0225HS_1581HS_0585HS_0225HS_0584HS_0225HS_0225HS_0223HS_0769HS_0767
CGLU196627 CG1412CG0197CG1413CG1546CG1412CG1546CG1546CG1414CG1412CG1413


Organism features enriched in list (features available for 44 out of the 46 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00008191792
Disease:Anthrax 0.000028544
Disease:Fibrinous_and_necrotizing_pleuropneumonia 0.005576122
Disease:Pneumonia 0.0079263412
Disease:Septicemia 0.001498434
Disease:and_meningitis 0.005576122
Disease:and_reproductive_problems 0.005576122
Disease:arthritis 0.005576122
Disease:chronic_bronchitis 0.000403133
Disease:myocarditis 0.005576122
Disease:otitis_media 0.001498434
Disease:sinusitis 0.001498434
Disease:speticemia 0.005576122
Endospores:Yes 1.332e-112053
GC_Content_Range7:30-40 0.005674320166
GC_Content_Range7:60-70 0.00008881134
GC_Content_Range7:70-100 0.0056815411
Genome_Size_Range5:2-4 0.000067027197
Genome_Size_Range5:4-6 0.00809857184
Genome_Size_Range9:2-3 0.002161017120
Genome_Size_Range9:8-10 0.002506849
Gram_Stain:Gram_Neg 0.000793015333
Gram_Stain:Gram_Pos 4.837e-929150
Habitat:Terrestrial 0.0045192731
Optimal_temp.:65 0.005576122
Pathogenic_in:Porcine 0.005576122
Shape:Branched_filament 0.001498434
Shape:Rod 0.002061235347



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GALACTITOLCAT-PWY (galactitol degradation)73630.5715
PWY-6196 (serine racemization)102700.5043
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))121770.5001
GLUTAMINDEG-PWY (glutamine degradation I)191980.4784
RIBOKIN-PWY (ribose degradation)2791210.4743
PWY-6374 (vibriobactin biosynthesis)77560.4654
GLUTDEG-PWY (glutamate degradation II)194970.4624
XYLCAT-PWY (xylose degradation I)2171030.4578
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50420.4469



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7340   G6959   EG12517   EG12275   EG12028   EG11958   EG11646   EG10818   EG10817   EG10816   EG10815   EG10814   
G73420.9994590.9986030.9995560.9991370.9990660.9994340.999130.9992430.9992010.9994560.9996220.99936
G73400.9987570.9995280.9993210.9987370.9996810.9989490.9993610.9994410.9996660.999590.999527
G69590.9988380.9987250.9994160.9989920.999480.9996220.9992760.9990420.9990980.998948
EG125170.9993480.9988320.9996180.9989270.9993590.9994570.9996140.9997240.999558
EG122750.9987060.999470.9987520.999210.9994240.9995260.9993470.999631
EG120280.9988480.999870.9996530.9993640.9990520.9992150.998989
EG119580.999020.9994270.9995430.9997910.9996860.999637
EG116460.9998090.9994730.9990950.9993030.999033
EG108180.9997150.9995510.9995970.999477
EG108170.9996120.9996190.999621
EG108160.9997490.999711
EG108150.999566
EG10814



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PAIRWISE BLAST SCORES:

  G7342   G7340   G6959   EG12517   EG12275   EG12028   EG11958   EG11646   EG10818   EG10817   EG10816   EG10815   EG10814   
G73420.0f0----------9.5e-9-
G7340-0.0f0--------1.9e-33--
G6959--0.0f0-----3.0e-19----
EG12517---0.0f0-------8.6e-29-
EG12275----0.0f0-------3.0e-113
EG12028--5.5e-8--0.0f0-5.2e-541.5e-14----
EG11958------0.0f0---6.9e-43--
EG11646-----5.2e-54-0.0f01.2e-15----
EG10818--------0.0f0----
EG10817---------0.0f0---
EG10816----------0.0f0--
EG10815---8.6e-29-------0.0f0-
EG10814----3.0e-113-------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- RIBOKIN-PWY (ribose degradation) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.154, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9992 EG10818 (rbsK) RIBOKIN-MONOMER (ribokinase)
   *in cand* 0.9995 0.9992 EG10817 (rbsD) EG10817-MONOMER (ribose pyranase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9989 EG10814 (rbsA) RBSA-MONOMER (RbsA)
   *in cand* 0.9995 0.9991 EG10815 (rbsB) RBSB-MONOMER (RbsB)
   *in cand* 0.9995 0.9990 EG10816 (rbsC) RBSC-MONOMER (RbsC)
   *in cand* 0.9993 0.9988 EG11646 (pscK) EG11646-MONOMER (predicted pseudouridine kinase)
   *in cand* 0.9995 0.9988 EG11958 (alsC) YJCV-MONOMER (AlsC)
   *in cand* 0.9992 0.9987 EG12028 (yeiI) EG12028-MONOMER (predicted kinase)
   *in cand* 0.9993 0.9987 EG12275 (xylG) XYLG-MONOMER (XylG)
   *in cand* 0.9994 0.9988 EG12517 (ytfQ) YTFQ-MONOMER (YtfQ)
   *in cand* 0.9991 0.9986 G6959 (ydjH) G6959-MONOMER (predicted kinase)
   *in cand* 0.9994 0.9987 G7340 (yphD) YPHD-MONOMER (YphD)
   *in cand* 0.9993 0.9986 G7342 (yphF) G7342-MONOMER (YphF)

- ABC-60-CPLX (YphD/YphE/YphF ABC transporter) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.154, average score: 0.999)
  Genes in pathway or complex:
             0.9987 0.9945 G7341 (yphE) YPHE-MONOMER (YphE)
   *in cand* 0.9993 0.9986 G7342 (yphF) G7342-MONOMER (YphF)
   *in cand* 0.9994 0.9987 G7340 (yphD) YPHD-MONOMER (YphD)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9989 EG10814 (rbsA) RBSA-MONOMER (RbsA)
   *in cand* 0.9995 0.9991 EG10815 (rbsB) RBSB-MONOMER (RbsB)
   *in cand* 0.9995 0.9990 EG10816 (rbsC) RBSC-MONOMER (RbsC)
   *in cand* 0.9995 0.9992 EG10817 (rbsD) EG10817-MONOMER (ribose pyranase)
   *in cand* 0.9995 0.9992 EG10818 (rbsK) RIBOKIN-MONOMER (ribokinase)
   *in cand* 0.9993 0.9988 EG11646 (pscK) EG11646-MONOMER (predicted pseudouridine kinase)
   *in cand* 0.9995 0.9988 EG11958 (alsC) YJCV-MONOMER (AlsC)
   *in cand* 0.9992 0.9987 EG12028 (yeiI) EG12028-MONOMER (predicted kinase)
   *in cand* 0.9993 0.9987 EG12275 (xylG) XYLG-MONOMER (XylG)
   *in cand* 0.9994 0.9988 EG12517 (ytfQ) YTFQ-MONOMER (YtfQ)
   *in cand* 0.9991 0.9986 G6959 (ydjH) G6959-MONOMER (predicted kinase)

- ABC-28-CPLX (ribose ABC transporter) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.231, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9991 EG10815 (rbsB) RBSB-MONOMER (RbsB)
   *in cand* 0.9995 0.9990 EG10816 (rbsC) RBSC-MONOMER (RbsC)
   *in cand* 0.9995 0.9989 EG10814 (rbsA) RBSA-MONOMER (RbsA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9992 EG10817 (rbsD) EG10817-MONOMER (ribose pyranase)
   *in cand* 0.9995 0.9992 EG10818 (rbsK) RIBOKIN-MONOMER (ribokinase)
   *in cand* 0.9993 0.9988 EG11646 (pscK) EG11646-MONOMER (predicted pseudouridine kinase)
   *in cand* 0.9995 0.9988 EG11958 (alsC) YJCV-MONOMER (AlsC)
   *in cand* 0.9992 0.9987 EG12028 (yeiI) EG12028-MONOMER (predicted kinase)
   *in cand* 0.9993 0.9987 EG12275 (xylG) XYLG-MONOMER (XylG)
   *in cand* 0.9994 0.9988 EG12517 (ytfQ) YTFQ-MONOMER (YtfQ)
   *in cand* 0.9991 0.9986 G6959 (ydjH) G6959-MONOMER (predicted kinase)
   *in cand* 0.9994 0.9987 G7340 (yphD) YPHD-MONOMER (YphD)
   *in cand* 0.9993 0.9986 G7342 (yphF) G7342-MONOMER (YphF)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10814 EG10815 EG10816 EG10817 EG10818 (centered at EG10816)
EG11646 (centered at EG11646)
EG11958 (centered at EG11958)
EG12028 (centered at EG12028)
EG12275 (centered at EG12275)
EG12517 (centered at EG12517)
G6959 (centered at G6959)
G7340 G7342 (centered at G7342)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7342   G7340   G6959   EG12517   EG12275   EG12028   EG11958   EG11646   EG10818   EG10817   EG10816   EG10815   EG10814   
178/623163/623271/623198/623192/623229/623194/623250/623306/623152/623177/623193/623176/623
AAUR290340:2:Tyes515--51585132320-3232-517515-
AAVE397945:0:Tyes2--20---19091910-1905-
ABAC204669:0:Tyes--0-247-246-----247
ACAU438753:0:Tyes--0871--869----871-
ACEL351607:0:Tyes-4251178----00----
ACRY349163:8:Tyes46-01765--48-2432-608607-
ADEH290397:0:Tyes--0----------
AFUL224325:0:Tyes--0--0-------
AHYD196024:0:Tyes3243110632106340231
ALAI441768:0:Tyes--0--954-954954----
AMAR329726:9:Tyes0------------
AMET293826:0:Tyes-0428-2306241129241--129-2306
ANAE240017:0:Tyes--0-----1525----
AORE350688:0:Tyes-----0-0-----
APER272557:0:Tyes--0----------
APLE416269:0:Tyes6896880689934690688690690686688689687
APLE434271:0:Tno7087070708970709707709709705707708706
ASAL382245:5:Tyes16981699169718630670169967016971700169916982110
ASP1667:3:Tyes17651767--1033937176700-1767--
ASP62977:0:Tyes--0--0-00----
AVAR240292:3:Tyes-19310-1930-193100-193119291930
BABO262698:0:Tno----1017--00--3481017
BABO262698:1:Tno-139101390--1391---1391--
BAFZ390236:2:Fyes-------0-----
BAMB339670:1:Tno-143-0142--------
BAMB339670:2:Tno------0---02246
BAMB339670:3:Tno172-322--0-00----
BAMB398577:1:Tno---0110--------
BAMB398577:2:Tno------0---02-
BAMB398577:3:Tno2720404--127-127127---88
BAMY326423:0:Tyes4304203001342
BANT260799:0:Tno431054203001342
BANT261594:2:Tno43844203001342
BANT568206:2:Tyes8384083858784878786848385
BANT592021:2:Tno43864203001342
BBAC264462:0:Tyes-------0-----
BBRO257310:0:Tyes0------------
BBUR224326:21:Fno-----0-0-----
BCAN483179:0:Tno953---1112--00--820-
BCAN483179:1:Tno-144101440--1441---1441-1442
BCEN331271:0:Tno--7300883730-133133----
BCEN331271:1:Tno-1657----2---20-
BCEN331271:2:Tno188-----------0
BCEN331272:1:Tyes---0742--134134----
BCEN331272:2:Tyes-820----0---02-
BCEN331272:3:Tyes181-307--307------0
BCER226900:1:Tyes22583111-2-30013-2
BCER288681:0:Tno43-4203001342
BCER315749:1:Tyes43-4203001342
BCER405917:1:Tyes43-4203001342
BCER572264:1:Tno438942-3001342
BCLA66692:0:Tyes-31742981317308693174327231773176317431733175
BFRA272559:1:Tyes--9850---------
BFRA295405:0:Tno--10660---------
BGAR290434:2:Fyes-----0-------
BHAL272558:0:Tyes4602902832910-290-287288290291289
BJAP224911:0:Fyes46950172420922101-1568780780-02092-
BLIC279010:0:Tyes3302330132843302032983301329832983299330133023300
BLON206672:0:Tyes---01649--17251380----
BMAL243160:1:Tno--0---200---2002021349
BMAL320388:0:Tno---0---------
BMAL320388:1:Tno--1373---1211---121112130
BMAL320389:0:Tyes---0---------
BMAL320389:1:Tyes--217---2---202394
BMEL224914:0:Tno----56--00--35856
BMEL224914:1:Tno-014141--0---0--
BMEL359391:0:Tno----999--00--334999
BMEL359391:1:Tno-134201341--1342---1342--
BOVI236:0:Tyes----0--------
BOVI236:1:Tyes-125701256--1257---1257-1258
BPET94624:0:Tyes--0----------
BPSE272560:0:Tyes---1150-------0
BPSE272560:1:Tyes241-0--237198237237-198200-
BPSE320372:0:Tno---1560-------0
BPSE320372:1:Tno0-306--55155-5149-
BPSE320373:0:Tno---1700-------0
BPSE320373:1:Tno0-239--55555-5553-
BPUM315750:0:Tyes2423024222023202021232422
BSP36773:0:Tyes-----0-00----
BSP36773:1:Tyes-0-2324--840---840838-
BSP36773:2:Tyes182-466-115-------0
BSP376:0:Tyes---392403-404-1030-3943920
BSUB:0:Tyes1450144901450144814461449144614461447144914501448
BSUI204722:0:Tyes946---1091--00--812-
BSUI204722:1:Tyes-141301412--1413---1413-1414
BSUI470137:0:Tno916---857--00--780-
BSUI470137:1:Tno-147101470--1471---1471-1472
BTHA271848:0:Tno------------0
BTHA271848:1:Tno17913704644175137175175-137139-
BTHE226186:0:Tyes--10720-1078-10781078----
BTHU281309:1:Tno43894203001342
BTHU412694:1:Tno439542-3001342
BTUR314724:0:Fyes-----0-------
BVIE269482:5:Tyes---1020--------
BVIE269482:6:Tyes-452--------0--
BVIE269482:7:Tyes168-284--17211717234--1680
BWEI315730:4:Tyes43-4203001342
BXEN266265:0:Tyes--0--0-0--57-58
BXEN266265:1:Tyes20111201-20110-1201-2008--1694-
CACE272562:1:Tyes952-0952-------952-
CAULO:0:Tyes-2-0--2-93-20-
CBEI290402:0:Tyes4425-039241892--03539--39244427
CBOT36826:1:Tno-----0-0372----
CBOT441770:0:Tyes-----0-0379----
CBOT441771:0:Tno-----0-0378----
CBOT441772:1:Tno-----0-0393----
CBOT498213:1:Tno-----0-0406----
CBOT508765:1:Tyes-304214643146701342
CBOT515621:2:Tyes103101-10310001010449-101103100
CBOT536232:0:Tno-----0-0465----
CBUR227377:1:Tyes-----0-------
CBUR360115:1:Tno-----0-------
CBUR434922:2:Tno-----0-------
CDIF272563:1:Tyes11322-132320132200-312
CDIP257309:0:Tyes-----0-00----
CEFF196164:0:Fyes-----0-00----
CGLU196627:0:Tyes-110801109-1224110812241224111011081109-
CHYD246194:0:Tyes-----0-0-----
CJAP155077:0:Tyes---0---------
CJEI306537:0:Tyes--------0----
CKOR374847:0:Tyes-----0--0----
CMIC31964:2:Tyes----763---0----
CMIC443906:2:Tyes---0839---530----
CNOV386415:0:Tyes01402-1443102
CPER195102:1:Tyes--150-14801470150149147146148
CPER195103:0:Tno--148-14601450148147145-146
CPER289380:3:Tyes--1371331350-0137136-133135
CPHY357809:0:Tyes99---10101000777---968
CSAL290398:0:Tyes8887088--87-1606-8788-
CSP501479:2:Fyes-0-----------
CSP501479:7:Fyes----290---0----
CSP501479:8:Fyes-----0-------
CSP78:2:Tyes--------0----
CTET212717:0:Tyes1031324132631325331327132513241326
CVIO243365:0:Tyes01-02-1443102
DETH243164:0:Tyes--0----------
DGEO319795:0:Tyes-279-160------279-0
DGEO319795:1:Tyes--778--0-0710----
DPSY177439:2:Tyes-----0-00----
DRAD243230:2:Tyes--------0----
DRAD243230:3:Tyes--0--772-772-----
DRED349161:0:Tyes0-40241443102
DSHI398580:5:Tyes901-----8990440---900
DSP216389:0:Tyes--0----------
DSP255470:0:Tno--0----------
ECAR218491:0:Tyes-2442949141478440231
ECOL199310:0:Tno882880031022179513287351724682464246624672465
ECOL316407:0:Tno776774024351922388229239417311735173317321734
ECOL331111:6:Tno802800026851988450218745021892185218721882186
ECOL362663:0:Tno831829027481954484163149022322229195522312230
ECOL364106:1:Tno899897028452130467232747223292325232723282326
ECOL405955:2:Tyes847845026931947429248843421222118212021212119
ECOL409438:6:Tyes909907026631940494251050021402136213821392137
ECOL413997:0:Tno708706024011914352226035819171913191519161914
ECOL439855:4:Tno12631261031772401878302888426282624262626272625
ECOL469008:0:Tno027332642314136627833603138-314031393141
ECOL481805:0:Tno998100017273649013603806135541324136413441334135
ECOL585034:0:Tno766764025691875409207241520742070207220732071
ECOL585035:0:Tno865863028782092463227546822772273227522762274
ECOL585055:0:Tno879877027872046465224147122432239224122422240
ECOL585056:2:Tno814812026912016441221344722152211221322142212
ECOL585057:0:Tno1442144003407278929293226100330623058306030613059
ECOL585397:0:Tno983981030312411619279262424142410241224132411
ECOL83334:0:Tno954952028092020583267258922652261226322642262
ECOLI:0:Tno799797024991826399235540520182014201620172015
ECOO157:0:Tno919917027442002548260255422422238224022412239
EFAE226185:3:Tyes-----1-110---
EFER585054:1:Tyes279179013122037178902016717921788179017911789
ESP42895:1:Tyes2605399202511253990124399039903994399239913993
FALN326424:0:Tyes--------0----
FMAG334413:1:Tyes--------0----
FNOD381764:0:Tyes----8080-0-----
FNUC190304:0:Tyes----0-------0
FPHI484022:1:Tyes--0--0-00----
FSP1855:0:Tyes-----------0-
FTUL401614:0:Tyes--0--0-00----
GBET391165:0:Tyes--0-----1410----
GFOR411154:0:Tyes---0---------
GKAU235909:1:Tyes5371893598189252101893018961895189318921894
GOXY290633:5:Tyes--0-----1463----
GSUL243231:0:Tyes-------0-----
GTHE420246:1:Tyes19121913253191255701913019161915191319121914
GVIO251221:0:Tyes31112470311-1837124718371837-1247311-
HACI382638:1:Tyes-----0-------
HAUR316274:2:Tyes-1547269901546135215471352---83-
HCHE349521:0:Tyes--2150121512542151114-125412521
HINF281310:0:Tyes3243142440231
HINF374930:0:Tyes1105501302004213
HINF71421:0:Tno324359642440231
HMOD498761:0:Tyes4-04203001342
HNEP81032:0:Tyes--2180-----0----
HPY:0:Tno-----0-------
HPYL357544:1:Tyes-----0-------
HPYL85963:0:Tno-----0-------
HSOM205914:1:Tyes547366313563673366330549547-
HSOM228400:0:Tno4762438624478440231
ILOI283942:0:Tyes--0----------
JSP290400:1:Tyes9849890984-1899869870--984484
KPNE272620:2:Tyes0266124303118244826632661266326632659266126622660
KRAD266940:2:Fyes-0-13079-0-483----
LACI272621:0:Tyes840-08408428448418440843841840842
LBIF355278:2:Tyes--0----------
LBIF456481:2:Tno--0----------
LBRE387344:2:Tyes--0----122512251373---
LCAS321967:1:Tyes3253--2550231
LCHO395495:0:Tyes0--24972382-2381---249514002496
LDEL321956:0:Tyes--0----00----
LDEL390333:0:Tyes--0----00----
LGAS324831:0:Tyes--0----00463---
LHEL405566:0:Tyes--0----00----
LINN272626:1:Tno-----0-0-----
LJOH257314:0:Tyes--0----00421---
LLAC272622:5:Tyes56-05657--595958-5657
LLAC272623:0:Tyes890810-91212119810
LMES203120:1:Tyes--0----183183----
LMON169963:0:Tno-----0-0-----
LMON265669:0:Tyes-----0-0-----
LPLA220668:0:Tyes--0--1128-112811281127---
LREU557436:0:Tyes-------001---
LSAK314315:0:Tyes--1--55-5610---
LSPH444177:1:Tyes-----508-5080----
LWEL386043:0:Tyes-----0-0-----
LXYL281090:0:Tyes1808--18080---1368--1808-
MABS561007:1:Tyes--------0----
MAVI243243:0:Tyes-----0--0----
MBOV233413:0:Tno--------0----
MBOV410289:0:Tno--------0----
MCAP243233:0:Tyes--0----------
MFLA265072:0:Tyes--------0----
MFLO265311:0:Tyes--------0----
MGIL350054:3:Tyes--0-----41----
MHYO262719:0:Tyes----0--------
MHYO262722:0:Tno----0--------
MHYO295358:0:Tno----0--------
MLOT266835:2:Tyes6070787414378644050165806712-55397862790
MMAG342108:0:Tyes--0----------
MMOB267748:0:Tyes----0--------
MPUL272635:0:Tyes----0----272---
MSED399549:0:Tyes-------00----
MSME246196:0:Tyes34713473012011194-3643-4053-36432575-
MSP164756:1:Tno1--0--2-770--0-
MSP164757:0:Tno1--0--2-746--0-
MSP189918:2:Tyes1--0--2-800--0-
MSP266779:3:Tyes--32022883043528854352748--2883-
MSP400668:0:Tyes1605337268720303362687160326870-4561605-
MSP409:2:Tyes-------26350----
MSTA339860:0:Tyes--0----------
MSUC221988:0:Tyes160314122516030225141225225-14116030
MTBCDC:0:Tno--------0----
MTBRV:0:Tno--------0----
MTHE187420:0:Tyes--0--0-------
MTHE264732:0:Tyes02-761375-2---201
MTUB336982:0:Tno--------0----
MTUB419947:0:Tyes--------0----
MVAN350058:0:Tyes--81-----0----
NFAR247156:2:Tyes--------0----
NHAM323097:2:Tyes--0----------
NSP103690:6:Tyes--0----00----
NSP35761:1:Tyes--3918-311454604546472----
NSP387092:0:Tyes-----0-------
OANT439375:4:Tyes--710-68-71610941094-716-0
OANT439375:5:Tyes20-1150-------2-
OCAR504832:0:Tyes--0----------
OIHE221109:0:Tyes3633640363365367364367367366364363365
PACN267747:0:Tyes-012031-1203012031203301-
PAER178306:0:Tyes--0--0--0----
PAER208963:0:Tyes319-0319-315-315315--319-
PAER208964:0:Tno0-3150-4-44--0-
PARC259536:0:Tyes--0----------
PARS340102:0:Tyes--0-----0----
PATL342610:0:Tyes--621-----0----
PCRY335284:1:Tyes--0----------
PDIS435591:0:Tyes--1700-170-170170----
PENT384676:0:Tyes0-40-4-445-0-
PFLU205922:0:Tyes0-987038542231445-02232
PFLU216595:1:Tyes1374-39026301798163717981798179716371639264
PFLU220664:0:Tyes490-61649049144924454920491
PHOR70601:0:Tyes--0----------
PING357804:0:Tyes3243142440231
PINT246198:1:Tyes---0---------
PISL384616:0:Tyes--0--0--0----
PLUM243265:0:Fyes-243143622436240231
PMAR146891:0:Tyes--0----------
PMAR167546:0:Tyes--0----------
PMAR74546:0:Tyes--0----------
PMAR74547:0:Tyes--0----------
PMAR93060:0:Tyes--0----------
PMOB403833:0:Tyes905156309059038811563881906902904905-
PMUL272843:1:Tyes1173201302004213
PNAP365044:8:Tyes--0---533----531-
PPEN278197:0:Tyes--0--440-0440439---
PPRO298386:1:Tyes3243-42440231
PPRO298386:2:Tyes----0--------
PPUT160488:0:Tno0-922--4-445-0-
PPUT351746:0:Tyes844-0--840-840840839-844-
PPUT76869:0:Tno920-0--916-916916915-920-
PRUM264731:0:Tyes---0-332-------
PSP117:0:Tyes1465451354550413
PSP296591:2:Tyes--0---99700--996-
PSP56811:2:Tyes--0----------
PSYR205918:0:Tyes0180213882497211437301802138813881389180213842496
PSYR223283:2:Tyes27-01097620-10950011095271096
RCAS383372:0:Tyes--800-2324-23242856--0-
RDEN375451:4:Tyes--15550--79914231423---800
RETL347834:2:Tyes--------0----
RETL347834:4:Tyes----------0--
RETL347834:5:Tyes17762553-1463252817005921700---03343
REUT264198:2:Tyes111-0--------111-
REUT264198:3:Tyes----1-0---0-1
REUT381666:1:Tyes--309-0-1---1-0
RFER338969:1:Tyes26920524-2690-0---269114642690
RLEG216596:2:Tyes20-----------
RLEG216596:5:Tyes-----0-0-----
RLEG216596:6:Tyes--9976301863-0-997-09722901
RMET266264:1:Tyes--0----------
RPAL258594:0:Tyes--0----------
RPAL316055:0:Tyes--0----------
RPAL316056:0:Tyes--0----------
RPAL316058:0:Tyes--0----------
RPOM246200:0:Tyes--0----------
RPOM246200:1:Tyes-----2004--0----
RRUB269796:1:Tyes-0---1718020442044-0--
RSAL288705:0:Tyes-0--1--29362936----
RSOL267608:0:Tyes-4490-448--------
RSOL267608:1:Tyes4--242-0-00-2444243
RSP101510:3:Fyes02----2-481-203253
RSP357808:0:Tyes--9631741-1192-1192550--17410
RSPH272943:3:Tyes02-----4848----
RSPH272943:4:Tyes--0--0-------
RSPH349101:1:Tno02-----4848----
RSPH349101:2:Tno--0--0-------
RSPH349102:4:Tyes-------00----
RSPH349102:5:Tyes---0-1259-------
RXYL266117:0:Tyes4561400-45645445725010457458455456454
SACI330779:0:Tyes--------0----
SAGA205921:0:Tno01-02-1-43102
SAGA208435:0:Tno01-02-1-43102
SAGA211110:0:Tyes01-02-1-43102
SALA317655:1:Tyes--0----------
SARE391037:0:Tyes-------00----
SAUR158878:1:Tno--0--43-4301---
SAUR158879:1:Tno--0--41-4101---
SAUR196620:0:Tno--0--44-4401---
SAUR273036:0:Tno--0--37-3701---
SAUR282458:0:Tno--0--38-128801---
SAUR282459:0:Tno--0--44-4401---
SAUR359786:1:Tno--0--41-4101---
SAUR359787:1:Tno--0--42-4201---
SAUR367830:3:Tno--0--49-4901---
SAUR418127:0:Tyes--0--41-4101---
SAUR426430:0:Tno--0--51-5101---
SAUR93061:0:Fno--0--47-4701---
SAUR93062:1:Tno--0--53-5301---
SAVE227882:1:Fyes086144100486944104411441044104409441144116533
SBAL399599:3:Tyes--0----00----
SBAL402882:1:Tno--0----00----
SBOY300268:1:Tyes38438215211945134201520015211519152019451342
SCO:2:Fyes3493493503490350349350350351349349348
SDEG203122:0:Tyes--25460---------
SDEN318161:0:Tyes-------00----
SDYS300267:1:Tyes9512685359--92826859282684-268528080
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