CANDIDATE ID: 51

CANDIDATE ID: 51

NUMBER OF GENES: 13
AVERAGE SCORE:    9.9937653e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    2.3076923e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7342 (yphF) (b2548)
   Products of gene:
     - G7342-MONOMER (YphF)
     - ABC-60-CPLX (YphD/YphE/YphF ABC transporter)

- G7340 (yphD) (b2546)
   Products of gene:
     - YPHD-MONOMER (YphD)
     - ABC-60-CPLX (YphD/YphE/YphF ABC transporter)

- EG12517 (ytfQ) (b4227)
   Products of gene:
     - YTFQ-MONOMER (YtfQ)
     - ABC-46-CPLX (galactose ABC transporter)
       Reactions:
        ATP + beta-D-galactose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-galactose[cytosol]

- EG12275 (xylG) (b3567)
   Products of gene:
     - XYLG-MONOMER (XylG)
     - ABC-33-CPLX (XylF/XylG/XylH xylose ABC transporter)
       Reactions:
        ATP + alpha-D-xylose[periplasmic space] + H2O  ->  ADP + phosphate + alpha-D-xylose[cytosol]

- EG12028 (yeiI) (b2160)
   Products of gene:
     - EG12028-MONOMER (predicted kinase)

- EG11958 (alsC) (b4086)
   Products of gene:
     - YJCV-MONOMER (AlsC)
     - ABC-42-CPLX (D-allose ABC transporter)
       Reactions:
        D-allose[periplasmic space] + ATP + H2O  ->  D-allose[cytosol] + ADP + phosphate

- EG11646 (pscK) (b2166)
   Products of gene:
     - EG11646-MONOMER (predicted pseudouridine kinase)
       Reactions:
        pseudouridine + ATP  ->  pseudouridine 5'-phosphate + ADP + 2 H+
         In pathways
         PWY-6019 (PWY-6019)

- EG10818 (rbsK) (b3752)
   Products of gene:
     - RIBOKIN-MONOMER (ribokinase)
     - CPLX0-7647 (ribokinase)
       Reactions:
        D-ribose + ATP  ->  D-ribose-5-phosphate + ADP + 2 H+
         In pathways
         RIBOKIN-PWY (ribose degradation)

- EG10817 (rbsD) (b3748)
   Products of gene:
     - EG10817-MONOMER (ribose pyranase)
     - CPLX0-7646 (ribose pyranase)
       Reactions:
        beta-D-ribofuranose  =  beta-D-ribopyranose
         In pathways
         RIBOKIN-PWY (ribose degradation)

- EG10816 (rbsC) (b3750)
   Products of gene:
     - RBSC-MONOMER (RbsC)
     - ABC-28-CPLX (ribose ABC transporter)
       Reactions:
        ATP + beta-D-ribopyranose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-ribopyranose[cytosol]

- EG10815 (rbsB) (b3751)
   Products of gene:
     - RBSB-MONOMER (RbsB)
     - ABC-28-CPLX (ribose ABC transporter)
       Reactions:
        ATP + beta-D-ribopyranose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-ribopyranose[cytosol]

- EG10814 (rbsA) (b3749)
   Products of gene:
     - RBSA-MONOMER (RbsA)
     - ABC-28-CPLX (ribose ABC transporter)
       Reactions:
        ATP + beta-D-ribopyranose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-ribopyranose[cytosol]

- EG10592 (mglA) (b2149)
   Products of gene:
     - MGLA-MONOMER (MglA)
     - ABC-18-CPLX (galactose ABC transporter)
       Reactions:
        ATP + beta-D-galactose[periplasmic space] + H2O  ->  ADP + phosphate + beta-D-galactose[cytosol]



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ORGANISMS CONTAINING AT LEAST 11 GENES FROM THE GROUP:

Total number of orgs: 140
Effective number of orgs (counting one per cluster within 468 clusters): 86

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175813
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295313
YPES386656 ncbi Yersinia pestis Pestoides F13
YPES377628 ncbi Yersinia pestis Nepal51613
YPES360102 ncbi Yersinia pestis Antiqua13
YPES349746 ncbi Yersinia pestis Angola13
YPES214092 ncbi Yersinia pestis CO9213
YPES187410 ncbi Yersinia pestis KIM 1013
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808113
VVUL216895 ncbi Vibrio vulnificus CMCP613
VVUL196600 ncbi Vibrio vulnificus YJ01613
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 221063313
VFIS312309 ncbi Vibrio fischeri ES11413
VEIS391735 ncbi Verminephrobacter eiseniae EF01-211
VCHO345073 ncbi Vibrio cholerae O39512
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N1696112
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB413
TSP1755 Thermoanaerobacter sp.13
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 3322313
TPET390874 ncbi Thermotoga petrophila RKU-111
TMAR243274 ncbi Thermotoga maritima MSB811
TLET416591 ncbi Thermotoga lettingae TMO12
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT213
SSON300269 ncbi Shigella sonnei Ss04613
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 1530511
SPRO399741 ncbi Serratia proteamaculans 56813
SPEA398579 ncbi Shewanella pealeana ATCC 70034513
SMEL266834 ncbi Sinorhizobium meliloti 102112
SMED366394 ncbi Sinorhizobium medicae WSM41911
SHIGELLA ncbi Shigella flexneri 2a str. 2457T11
SHAL458817 ncbi Shewanella halifaxensis HAW-EB413
SFLE373384 ncbi Shigella flexneri 5 str. 840111
SFLE198214 ncbi Shigella flexneri 2a str. 30112
SERY405948 ncbi Saccharopolyspora erythraea NRRL 233812
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47613
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6713
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1813
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty213
SCO ncbi Streptomyces coelicolor A3(2)13
SBOY300268 ncbi Shigella boydii Sb22713
SAVE227882 ncbi Streptomyces avermitilis MA-468013
SAGA211110 ncbi Streptococcus agalactiae NEM31611
SAGA208435 ncbi Streptococcus agalactiae 2603V/R11
SAGA205921 ncbi Streptococcus agalactiae A90911
RXYL266117 ncbi Rubrobacter xylanophilus DSM 994113
RSOL267608 ncbi Ralstonia solanacearum GMI100011
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 384112
RETL347834 ncbi Rhizobium etli CFN 4212
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC300011
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a13
PSP117 Pirellula sp.13
PPRO298386 ncbi Photobacterium profundum SS913
PMUL272843 ncbi Pasteurella multocida multocida Pm7013
PMOB403833 ncbi Petrotoga mobilis SJ9511
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO112
PING357804 ncbi Psychromonas ingrahamii 3713
PFLU220664 ncbi Pseudomonas fluorescens Pf-512
PFLU216595 ncbi Pseudomonas fluorescens SBW2512
PFLU205922 ncbi Pseudomonas fluorescens Pf0-111
OIHE221109 ncbi Oceanobacillus iheyensis HTE83113
OANT439375 ncbi Ochrobactrum anthropi ATCC 4918811
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E12
MSP400668 ncbi Marinomonas sp. MWYL111
MLOT266835 ncbi Mesorhizobium loti MAFF30309912
LLAC272623 ncbi Lactococcus lactis lactis Il140312
LCAS321967 ncbi Lactobacillus casei ATCC 33411
LACI272621 ncbi Lactobacillus acidophilus NCFM12
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857813
HSOM228400 ncbi Haemophilus somnus 233613
HSOM205914 ncbi Haemophilus somnus 129PT12
HMOD498761 ncbi Heliobacterium modesticaldum Ice112
HINF71421 ncbi Haemophilus influenzae Rd KW2013
HINF374930 ncbi Haemophilus influenzae PittEE13
HINF281310 ncbi Haemophilus influenzae 86-028NP13
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-213
GKAU235909 ncbi Geobacillus kaustophilus HTA42613
ESP42895 Enterobacter sp.13
EFER585054 ncbi Escherichia fergusonii ATCC 3546913
ECOO157 ncbi Escherichia coli O157:H7 EDL93313
ECOL83334 Escherichia coli O157:H713
ECOL585397 ncbi Escherichia coli ED1a13
ECOL585057 ncbi Escherichia coli IAI3913
ECOL585056 ncbi Escherichia coli UMN02613
ECOL585055 ncbi Escherichia coli 5598913
ECOL585035 ncbi Escherichia coli S8813
ECOL585034 ncbi Escherichia coli IAI113
ECOL481805 ncbi Escherichia coli ATCC 873913
ECOL469008 ncbi Escherichia coli BL21(DE3)12
ECOL439855 ncbi Escherichia coli SMS-3-513
ECOL413997 ncbi Escherichia coli B str. REL60613
ECOL409438 ncbi Escherichia coli SE1113
ECOL405955 ncbi Escherichia coli APEC O113
ECOL364106 ncbi Escherichia coli UTI8913
ECOL362663 ncbi Escherichia coli 53613
ECOL331111 ncbi Escherichia coli E24377A13
ECOL316407 ncbi Escherichia coli K-12 substr. W311013
ECOL199310 ncbi Escherichia coli CFT07313
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104312
DRED349161 ncbi Desulfotomaculum reducens MI-112
CVIO243365 ncbi Chromobacterium violaceum ATCC 1247212
CTET212717 ncbi Clostridium tetani E8813
CNOV386415 ncbi Clostridium novyi NT12
CDIF272563 ncbi Clostridium difficile 63012
CBOT515621 ncbi Clostridium botulinum Ba4 str. 65712
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B12
BXEN266265 ncbi Burkholderia xenovorans LB40012
BWEI315730 ncbi Bacillus weihenstephanensis KBAB413
BVIE269482 ncbi Burkholderia vietnamiensis G412
BTHU412694 ncbi Bacillus thuringiensis Al Hakam12
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-2713
BTHA271848 ncbi Burkholderia thailandensis E26412
BSUI470137 ncbi Brucella suis ATCC 2344511
BSUI204722 ncbi Brucella suis 133011
BSUB ncbi Bacillus subtilis subtilis 16813
BSP36773 Burkholderia sp.12
BPUM315750 ncbi Bacillus pumilus SAFR-03213
BPSE320373 ncbi Burkholderia pseudomallei 66811
BPSE320372 ncbi Burkholderia pseudomallei 1710b11
BPSE272560 ncbi Burkholderia pseudomallei K9624311
BLIC279010 ncbi Bacillus licheniformis ATCC 1458013
BHAL272558 ncbi Bacillus halodurans C-12511
BCLA66692 ncbi Bacillus clausii KSM-K1612
BCER572264 ncbi Bacillus cereus 03BB10212
BCER405917 Bacillus cereus W13
BCER315749 ncbi Bacillus cytotoxicus NVH 391-9813
BCER288681 ncbi Bacillus cereus E33L13
BCEN331272 ncbi Burkholderia cenocepacia HI242412
BCEN331271 ncbi Burkholderia cenocepacia AU 105412
BCAN483179 ncbi Brucella canis ATCC 2336511
BANT592021 ncbi Bacillus anthracis A024813
BANT568206 ncbi Bacillus anthracis CDC 68413
BANT261594 ncbi Bacillus anthracis Ames Ancestor13
BANT260799 ncbi Bacillus anthracis Sterne13
BAMY326423 ncbi Bacillus amyloliquefaciens FZB4213
BAMB398577 ncbi Burkholderia ambifaria MC40-612
BAMB339670 ncbi Burkholderia ambifaria AMMD12
ASAL382245 ncbi Aeromonas salmonicida salmonicida A44913
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL0313
APLE416269 ncbi Actinobacillus pleuropneumoniae L2013
AHYD196024 Aeromonas hydrophila dhakensis13


Names of the homologs of the genes in the group in each of these orgs
  G7342   G7340   EG12517   EG12275   EG12028   EG11958   EG11646   EG10818   EG10817   EG10816   EG10815   EG10814   EG10592   
YPSE349747 YPSIP31758_1507YPSIP31758_4029YPSIP31758_0147YPSIP31758_4100YPSIP31758_0008YPSIP31758_4029YPSIP31758_0008YPSIP31758_0008YPSIP31758_0007YPSIP31758_1509YPSIP31758_1507YPSIP31758_2466YPSIP31758_2466
YPSE273123 YPTB1522YPTB3806YPTB0127YPTB3889YPTB0008YPTB3806YPTB0008YPTB0008YPTB0007YPTB2535YPTB2537YPTB1523YPTB1523
YPES386656 YPDSF_1913YPDSF_3327YPDSF_3520YPDSF_3778YPDSF_1308YPDSF_3327YPDSF_0228YPDSF_0228YPDSF_3898YPDSF_1910YPDSF_1913YPDSF_1469YPDSF_1469
YPES377628 YPN_2095YPN_3612YPN_0059YPN_3683YPN_0008YPN_3612YPN_0008YPN_0008YPN_0007YPN_2093YPN_2095YPN_2471YPN_2471
YPES360102 YPA_1996YPA_3791YPA_0114YPA_4126YPA_0011YPA_3791YPA_0011YPA_0011YPA_0010YPA_1994YPA_1996YPA_0803YPA_0803
YPES349746 YPANGOLA_A1761YPANGOLA_A4097YPANGOLA_A0475YPANGOLA_A4157YPANGOLA_A0008YPANGOLA_A4097YPANGOLA_A0008YPANGOLA_A0008YPANGOLA_A0007YPANGOLA_A1759YPANGOLA_A1761YPANGOLA_A3018YPANGOLA_A3018
YPES214092 YPO2501YPO3963YPO3908YPO4036YPO0008YPO3963YPO0008YPO0008YPO0007YPO2499YPO2501YPO1508YPO1508
YPES187410 Y1687Y3866Y0328Y4055Y0008Y3866Y0008Y0008Y0007Y1689Y1687Y2661Y2661
YENT393305 YE2815YE0010YE0141YE4120YE0012YE0010YE0012YE0012YE0008YE0010YE0011YE0009YE2814
VVUL216895 VV2_0064VV2_0063VV2_0064VV2_0062VV2_0065VV2_0063VV2_0065VV2_0065VV2_0061VV2_0063VV2_0064VV2_0062VV2_1325
VVUL196600 VVA0571VVA0570VVA0571VVA0569VVA0572VVA0570VVA0572VVA0572VVA0568VVA0570VVA0571VVA0569VVA0162
VPAR223926 VPA1084VPA1085VPA1084VPA1086VPA1083VPA1085VPA1083VPA1083VPA1087VPA1085VPA1084VPA1086VPA1086
VFIS312309 VF1447VF1446VF1447VF1445VF1448VF1446VF1448VF1448VF1444VF1446VF1447VF1445VF1445
VEIS391735 VEIS_1480VEIS_3417VEIS_2026VEIS_0738VEIS_2045VEIS_3559VEIS_2130VEIS_2045VEIS_2682VEIS_1088VEIS_0061
VCHO345073 VC0395_0008VC0395_0009VC0395_0008VC0395_0010VC0395_0007VC0395_0009VC0395_0007VC0395_0011VC0395_0009VC0395_0008VC0395_0010VC0395_A0944
VCHO VCA0130VCA0129VCA0130VCA0128VCA0131VCA0129VCA0131VCA0127VCA0129VCA0130VCA0128VC1327
TTEN273068 TTE0765TTE0205TTE0206TTE0204TTE0326TTE0764TTE0326TTE0202TTE0203TTE0205TTE0206TTE0204TTE0763
TSP1755 TETH514_0166TETH514_0158TETH514_0166TETH514_0157TETH514_0258TETH514_0165TETH514_0258TETH514_0162TETH514_0163TETH514_0165TETH514_0166TETH514_0164TETH514_0157
TPSE340099 TETH39_2038TETH39_2039TETH39_2038TETH39_2040TETH39_1953TETH39_2039TETH39_1953TETH39_2042TETH39_2041TETH39_2039TETH39_2038TETH39_2040TETH39_2040
TPET390874 TPET_1794TPET_0812TPET_1794TPET_0809TPET_1793TPET_1789TPET_1791TPET_1793TPET_1794TPET_0809TPET_0809
TMAR243274 TM_0958TM_0955TM_0958TM_0956TM_0955TM_0960TM_0959TM_0955TM_0958TM_0956TM_0956
TLET416591 TLET_0359TLET_0389TLET_1327TLET_2030TLET_0185TLET_0187TLET_1905TLET_0189TLET_1328TLET_1325TLET_1327TLET_1327
STYP99287 STM2190STM3883STM3884STM3882STM3885STM3883STM3547STM3885STM3881STM3883STM3884STM3882STM2189
SSON300269 SSO_2631SSO_2629SSO_4409SSO_3919SSO_2216SSO_3920SSO_2222SSO_3922SSO_3918SSO_3920SSO_4409SSO_3919SSO_2205
SSAP342451 SSP1392SSP1393SSP1392SSP1393SSP0744SSP0744SSP1395SSP1393SSP1392SSP1394SSP1394
SPRO399741 SPRO_4229SPRO_4227SPRO_4768SPRO_0100SPRO_4897SPRO_4899SPRO_4897SPRO_4897SPRO_4901SPRO_4899SPRO_4898SPRO_4900SPRO_1564
SPEA398579 SPEA_0517SPEA_0516SPEA_0517SPEA_0515SPEA_2951SPEA_0516SPEA_2951SPEA_0518SPEA_0514SPEA_0516SPEA_0517SPEA_0515SPEA_0515
SMEL266834 SMB21377SMB21375SMB21587SMB20894SMC00473SMC02772SMC00473SMC01103SMB20352SMB21345SMC02325SMB20713
SMED366394 SMED_4769SMED_4767SMED_4908SMED_4474SMED_4013SMED_5745SMED_0052SMED_3767SMED_4740SMED_0226SMED_4267
SHIGELLA MGLBYPHDXYLGYEIIRBSCYEICRBSKRBSDRBSCMGLAMGLA
SHAL458817 SHAL_0581SHAL_0580SHAL_0581SHAL_0579SHAL_3041SHAL_0580SHAL_3041SHAL_0582SHAL_0578SHAL_0580SHAL_0581SHAL_0579SHAL_0579
SFLE373384 SFV_2596SFV_2594SFV_3973SFV_2235SFV_3749SFV_2241SFV_3747SFV_3752SFV_3749SFV_3973SFV_2224
SFLE198214 AAN43756.1AAN44091.1AAN45681.1AAN45060.1AAN43764.1AAN45272.1AAN43770.1AAN45273.1AAN45269.1AAN45272.1AAN43755.1AAN43755.1
SERY405948 SACE_5660SACE_5660SACE_5660SACE_5659SACE_3234SACE_1882SACE_1271SACE_1271SACE_5660SACE_5660SACE_5659SACE_5659
SENT454169 SEHA_C2425SEHA_C4216SEHA_C4217SEHA_C4215SEHA_C4218SEHA_C4216SEHA_C3859SEHA_C4218SEHA_C4214SEHA_C4216SEHA_C4217SEHA_C4215SEHA_C2424
SENT321314 SCH_2206SCH_3796SCH_3797SCH_3795SCH_3798SCH_3796SCH_3477SCH_3798SCH_3794SCH_3796SCH_3797SCH_3795SCH_3795
SENT220341 STY2424STY3895STY3894STY3896STY3892STY3895STY4264STY3892STY3897STY3895STY3894STY3896STY3896
SENT209261 T0665T3636T3635T3637T3634T3636T3974T3634T3638T3636T3635T3637T3637
SCO SCO2747SCO2747SCO2747SCO2405SCO2748SCO2747SCO2748SCO2748SCO2749SCO2747SCO2747SCO2746SCO2746
SBOY300268 SBO_2574SBO_2572SBO_4218SBO_3575SBO_2167SBO_3764SBO_2167SBO_3766SBO_3762SBO_3764SBO_4218SBO_3575SBO_2178
SAVE227882 SAV971SAV1827SAV971SAV5768SAV5317SAV5318SAV5317SAV5317SAV5316SAV5318SAV5318SAV7416SAV5319
SAGA211110 GBS0113GBS0114GBS0113GBS0115GBS0114GBS0117GBS0116GBS0114GBS0113GBS0115GBS0115
SAGA208435 SAG_0114SAG_0115SAG_0114SAG_0116SAG_0115SAG_0118SAG_0117SAG_0115SAG_0114SAG_0116SAG_0116
SAGA205921 SAK_0166SAK_0167SAK_0166SAK_0168SAK_0167SAK_0170SAK_0169SAK_0167SAK_0166SAK_0168SAK_0168
RXYL266117 RXYL_0948RXYL_1889RXYL_0948RXYL_0946RXYL_0949RXYL_3002RXYL_0491RXYL_0949RXYL_0950RXYL_0947RXYL_0948RXYL_0946RXYL_0946
RSOL267608 RSC1017RSP1635RSC1241RSP1634RSC1013RSC1013RSC1013RSC1243RSC1017RSC1242RSC1242
RLEG216596 PRL90225PRL90223RL2376RL3616PRL120174RL1746PRL120174RL2747RL1746RL2721RL4654RL4654
RETL347834 RHE_CH02400RHE_CH03189RHE_CH02085RHE_CH03164RHE_CH02324RHE_CH01211RHE_CH02324RHE_PC00098RHE_PF00034RHE_CH00612RHE_CH03989RHE_CH03989
PSYR223283 PSPTO_2399PSPTO_3490PSPTO_3004PSPTO_3488PSPTO_2371PSPTO_2371PSPTO_2372PSPTO_3488PSPTO_2399PSPTO_3489PSPTO_3489
PSYR205918 PSYR_0776PSYR_2570PSYR_3265PSYR_2885PSYR_4487PSYR_2570PSYR_2155PSYR_2155PSYR_2156PSYR_2570PSYR_2151PSYR_3264PSYR_3264
PSP117 RB5973RB3497RB3493RB3496RB3499RB3497RB3499RB3499RB3491RB3497RB3493RB3496RB3496
PPRO298386 PBPRB1559PBPRB1558PBPRB1559PBPRA0463PBPRB1560PBPRB1558PBPRB1560PBPRB1560PBPRB1556PBPRB1558PBPRB1559PBPRB1557PBPRB1871
PMUL272843 PM1325PM0154PM0153PM0155PM0152PM0154PM0152PM0152PM0156PM0154PM0153PM0155PM1039
PMOB403833 PMOB_0923PMOB_1602PMOB_0923PMOB_0921PMOB_0899PMOB_1602PMOB_0899PMOB_0924PMOB_0920PMOB_0922PMOB_0923
PLUM243265 PLU0057PLU0058PLU0056PLU4352PLU0057PLU4352PLU0059PLU0055PLU0057PLU0058PLU0056PLU0056
PING357804 PING_0343PING_0342PING_0343PING_0341PING_0344PING_0342PING_0344PING_0344PING_0340PING_0342PING_0343PING_0341PING_0341
PFLU220664 PFL_2593PFL_2593PFL_2594PFL_2105PFL_2595PFL_2105PFL_2105PFL_2106PFL_2595PFL_2101PFL_2594PFL_2594
PFLU216595 PFLU3727PFLU2583PFLU2299PFLU4156PFLU3994PFLU4156PFLU4156PFLU4155PFLU3994PFLU3996PFLU2584PFLU2584
PFLU205922 PFL_1919PFL_1919PFL_2301PFL_1923PFL_4139PFL_1923PFL_1923PFL_1924PFL_1919PFL_4140PFL_4140
OIHE221109 OB2572OB2573OB2572OB2574OB2576OB2573OB2576OB2576OB2575OB2573OB2572OB2574OB2574
OANT439375 OANT_0292OANT_0290OANT_1418OANT_3415OANT_4066OANT_4447OANT_4447OANT_4066OANT_0292OANT_3347OANT_3347
MSUC221988 MS1612MS0199MS1612MS0062MS0283MS0199MS0283MS0283MS0199MS1612MS0062MS0642
MSP400668 MMWYL1_3110MMWYL1_1867MMWYL1_3535MMWYL1_1866MMWYL1_4169MMWYL1_3108MMWYL1_4169MMWYL1_1534MMWYL1_1987MMWYL1_3110MMWYL1_1986
MLOT266835 MLL7668MLL1013MLL1012MLL5657MLL0029MLL2145MLL0029MLR8492MLL7011MLL1012MLL3598MLL5657
LLAC272623 L82310L83296L82310L84240L83296L86157L86157L85737L83296L82310L84240L84240
LCAS321967 LSEI_0310LSEI_0309LSEI_0310LSEI_0309LSEI_0312LSEI_0312LSEI_0307LSEI_0309LSEI_0310LSEI_0308LSEI_0308
LACI272621 LBA1481LBA1481LBA1483LBA1485LBA1482LBA1485LBA0587LBA1484LBA1482LBA1481LBA1483LBA1483
KPNE272620 GKPORF_B0794GKPORF_B3497GKPORF_B3984GKPORF_B3283GKPORF_B3499GKPORF_B3497GKPORF_B3499GKPORF_B3499GKPORF_B3495GKPORF_B3497GKPORF_B3498GKPORF_B3496GKPORF_B1873
HSOM228400 HSM_0556HSM_0091HSM_0092HSM_0934HSM_0093HSM_0558HSM_0093HSM_0093HSM_0089HSM_0091HSM_0092HSM_0090HSM_0104
HSOM205914 HS_0767HS_0584HS_1581HS_0585HS_0225HS_0584HS_0225HS_0225HS_0223HS_0769HS_0767HS_1580
HMOD498761 HM1_2420HM1_2420HM1_2418HM1_2416HM1_2419HM1_2416HM1_2416HM1_2417HM1_2419HM1_2420HM1_2418HM1_2418
HINF71421 HI_0504HI_0503HI_0504HI_1110HI_0505HI_0503HI_0505HI_0505HI_0501HI_0503HI_0504HI_0502HI_0823
HINF374930 CGSHIEE_00470CGSHIEE_06515CGSHIEE_00470CGSHIEE_00480CGSHIEE_00465CGSHIEE_00475CGSHIEE_00465CGSHIEE_00465CGSHIEE_00485CGSHIEE_00475CGSHIEE_00470CGSHIEE_00480CGSHIEE_07945
HINF281310 NTHI0632NTHI0631NTHI0632NTHI0630NTHI0633NTHI0631NTHI0633NTHI0633NTHI0629NTHI0631NTHI0632NTHI0630NTHI0988
GTHE420246 GTNG_3170GTNG_3171GTNG_3170GTNG_1800GTNG_1231GTNG_3171GTNG_1231GTNG_3174GTNG_3173GTNG_3171GTNG_3170GTNG_3172GTNG_3172
GKAU235909 GK1896GK3227GK3226GK1880GK1372GK3227GK1372GK3230GK3229GK3227GK3226GK3228GK1894
ESP42895 ENT638_2750ENT638_4114ENT638_0412ENT638_0289ENT638_4112ENT638_0288ENT638_4112ENT638_4112ENT638_4116ENT638_4114ENT638_4113ENT638_4115ENT638_2749
EFER585054 EFER_2518EFER_4049EFER_4306EFER_4048EFER_2245EFER_4284EFER_2252EFER_4051EFER_4047EFER_4049EFER_4050EFER_4048EFER_2234
ECOO157 YPHFYPHDYTFQXYLGYEIIZ5690YEICRBSKRBSDRBSCRBSBRBSAMGLA
ECOL83334 ECS3414ECS3412ECS5205ECS4450ECS3052ECS5072ECS3058ECS4694ECS4690ECS4692ECS4693ECS4691ECS3041
ECOL585397 ECED1_2975ECED1_2973ECED1_5084ECED1_4439ECED1_2609ECED1_4820ECED1_2614ECED1_4442ECED1_4438ECED1_4440ECED1_4441ECED1_4439ECED1_2596
ECOL585057 ECIAI39_2751ECIAI39_2749ECIAI39_4698ECIAI39_4079ECIAI39_4226ECIAI39_4510ECIAI39_2306ECIAI39_4357ECIAI39_4353ECIAI39_4355ECIAI39_4356ECIAI39_4354ECIAI39_2288
ECOL585056 ECUMN_2868ECUMN_2866ECUMN_4761ECUMN_4078ECUMN_2496ECUMN_4280ECUMN_2502ECUMN_4282ECUMN_4278ECUMN_4280ECUMN_4281ECUMN_4279ECUMN_2482
ECOL585055 EC55989_2834EC55989_2832EC55989_4786EC55989_4022EC55989_2413EC55989_4225EC55989_2419EC55989_4227EC55989_4223EC55989_4225EC55989_4226EC55989_4224EC55989_2399
ECOL585035 ECS88_2718ECS88_2716ECS88_4818ECS88_3985ECS88_2309ECS88_4172ECS88_2314ECS88_4174ECS88_4170ECS88_4172ECS88_4173ECS88_4171ECS88_2295
ECOL585034 ECIAI1_2601ECIAI1_2599ECIAI1_4460ECIAI1_3732ECIAI1_2240ECIAI1_3934ECIAI1_2246ECIAI1_3936ECIAI1_3932ECIAI1_3934ECIAI1_3935ECIAI1_3933ECIAI1_2226
ECOL481805 ECOLC_1129ECOLC_1131ECOLC_3783ECOLC_0147ECOLC_1488ECOLC_3940ECOLC_1482ECOLC_4242ECOLC_4246ECOLC_4244ECOLC_4243ECOLC_4245ECOLC_1499
ECOL469008 ECBD_1136ECBD_1138ECBD_3806ECBD_4281ECBD_1498ECBD_3944ECBD_1492ECBD_4278ECBD_4280ECBD_4279ECBD_4281ECBD_1509
ECOL439855 ECSMS35_2701ECSMS35_2699ECSMS35_4705ECSMS35_3890ECSMS35_2307ECSMS35_4552ECSMS35_2313ECSMS35_4120ECSMS35_4116ECSMS35_4118ECSMS35_4119ECSMS35_4117ECSMS35_2296
ECOL413997 ECB_02440ECB_02438ECB_04096ECB_03635ECB_02089ECB_03958ECB_02095ECB_03638ECB_03634ECB_03636ECB_03637ECB_03635ECB_02078
ECOL409438 ECSE_2835ECSE_2833ECSE_4533ECSE_3842ECSE_2428ECSE_4384ECSE_2434ECSE_4042ECSE_4038ECSE_4040ECSE_4041ECSE_4039ECSE_2416
ECOL405955 APECO1_3983APECO1_3985APECO1_2164APECO1_2882APECO1_4392APECO1_2364APECO1_4388APECO1_2711APECO1_2715APECO1_2713APECO1_2712APECO1_2714APECO1_4402
ECOL364106 UTI89_C2867UTI89_C2865UTI89_C4832UTI89_C4108UTI89_C2435UTI89_C4305UTI89_C2440UTI89_C4307UTI89_C4303UTI89_C4305UTI89_C4306UTI89_C4304UTI89_C2422
ECOL362663 ECP_2549ECP_2547ECP_4477ECP_3670ECP_2200ECP_3344ECP_2206ECP_3952ECP_3947ECP_3671ECP_3951ECP_3948ECP_2188
ECOL331111 ECE24377A_2833ECE24377A_2831ECE24377A_4797ECE24377A_4063ECE24377A_2463ECE24377A_4266ECE24377A_2463ECE24377A_4268ECE24377A_4264ECE24377A_4266ECE24377A_4267ECE24377A_4265ECE24377A_2444
ECOL316407 ECK2545:JW2532:B2548ECK2543:JW2530:B2546ECK4223:JW4186:B4227ECK3556:JW3539:B3567ECK2153:JW2147:B2160ECK4079:JW4047:B4086ECK2159:JW2153:B2166ECK3746:JW3731:B3752ECK3742:JW5857:B3748ECK3744:JW3729:B3750ECK3745:JW3730:B3751ECK3743:JW3728:B3749ECK2142:JW2136:B2149
ECOL199310 C3070C3068C5325C4387C2695C5092C2701C4680C4676C4678C4679C4677C2683
ECAR218491 ECA0012ECA4236ECA0099ECA0014ECA1461ECA0014ECA0014ECA0010ECA0012ECA0013ECA0011ECA0011
DRED349161 DRED_2522DRED_2522DRED_2524DRED_2526DRED_2523DRED_2526DRED_2526DRED_2525DRED_2523DRED_2522DRED_2524DRED_2524
CVIO243365 CV_3016CV_3017CV_3016CV_3018CV_3017CV_3020CV_3020CV_3019CV_3017CV_3016CV_3018CV_3018
CTET212717 CTC_00907CTC_00906CTC_02347CTC_02350CTC_00909CTC_02349CTC_00909CTC_00909CTC_02351CTC_02349CTC_02347CTC_02350CTC_00861
CNOV386415 NT01CX_0162NT01CX_0163NT01CX_0162NT01CX_0164NT01CX_0163NT01CX_0166NT01CX_0166NT01CX_0165NT01CX_0163NT01CX_0162NT01CX_0164NT01CX_0164
CDIF272563 CD0300CD1588CD1589CD0301CD0299CD1588CD0299CD0299CD0302CD0300CD0301CD0301
CBOT515621 CLJ_B1315CLJ_B1313CLJ_B1315CLJ_B1312CLJ_B1209CLJ_B1313CLJ_B1209CLJ_B1671CLJ_B1313CLJ_B1315CLJ_B1312CLJ_B1312
CBOT508765 CLL_A1530CLL_A1531CLL_A1529CLL_A3001CLL_A1530CLL_A3004CLL_A1527CLL_A1528CLL_A1530CLL_A1531CLL_A1529CLL_A1529
BXEN266265 BXE_B0573BXE_B1397BXE_B0573BXE_B2620BXE_C1282BXE_B1397BXE_C1282BXE_B0576BXE_C1349BXE_B0894BXE_C1350BXE_C1350
BWEI315730 BCERKBAB4_0583BCERKBAB4_0582BCERKBAB4_0583BCERKBAB4_0581BCERKBAB4_0579BCERKBAB4_0582BCERKBAB4_0579BCERKBAB4_0579BCERKBAB4_0580BCERKBAB4_0582BCERKBAB4_0583BCERKBAB4_0581BCERKBAB4_0581
BVIE269482 BCEP1808_1558BCEP1808_3838BCEP1808_6552BCEP1808_6448BCEP1808_1562BCEP1808_1507BCEP1808_1562BCEP1808_1423BCEP1808_3381BCEP1808_1558BCEP1808_1389BCEP1808_1389
BTHU412694 BALH_0612BALH_0611BALH_0612BALH_0609BALH_0611BALH_0607BALH_0607BALH_0608BALH_0611BALH_0612BALH_0609BALH_0609
BTHU281309 BT9727_0580BT9727_0579BT9727_0580BT9727_0578BT9727_0576BT9727_0579BT9727_0576BT9727_0576BT9727_0577BT9727_0579BT9727_0580BT9727_0578BT9727_0578
BTHA271848 BTH_I2475BTH_I2433BTH_I2342BTH_I2340BTH_I2471BTH_I2433BTH_I2471BTH_I2471BTH_I2433BTH_I2435BTH_II0211BTH_II1627
BSUI470137 BSUIS_B0991BSUIS_A1690BSUIS_A1689BSUIS_B0929BSUIS_A1690BSUIS_B0007BSUIS_B0007BSUIS_A1690BSUIS_B0850BSUIS_A1691BSUIS_A1691
BSUI204722 BR_A0996BR_1631BR_1630BR_A1151BR_1631BR_A0005BR_A0005BR_1631BR_A0858BR_1632BR_A1151
BSUB BSU35960BSU35950BSU35960BSU35940BSU35920BSU35950BSU35920BSU35920BSU35930BSU35950BSU35960BSU35940BSU35940
BSP36773 BCEP18194_A4745BCEP18194_B0047BCEP18194_B2371BCEP18194_A4683BCEP18194_C7623BCEP18194_B0886BCEP18194_C7623BCEP18194_C7623BCEP18194_B0886BCEP18194_B0884BCEP18194_A4569BCEP18194_A4569
BPUM315750 BPUM_3268BPUM_3267BPUM_3268BPUM_3266BPUM_3264BPUM_3267BPUM_3264BPUM_3264BPUM_3265BPUM_3267BPUM_3268BPUM_3266BPUM_3266
BPSE320373 BURPS668_1853BURPS668_A0457BURPS668_A0286BURPS668_1858BURPS668_1909BURPS668_1858BURPS668_1858BURPS668_1909BURPS668_1907BURPS668_A0286BURPS668_A0286
BPSE320372 BURPS1710B_A2179BURPS1710B_B2112BURPS1710B_B1956BURPS1710B_A2184BURPS1710B_A2230BURPS1710B_A2184BURPS1710B_A2184BURPS1710B_A2230BURPS1710B_A2228BURPS1710B_B1956BURPS1710B_B1956
BPSE272560 BPSL1834BPSS0257BPSS0142BPSL1830BPSL1791BPSL1830BPSL1830BPSL1791BPSL1793BPSS0142BPSS0142
BLIC279010 BL02443BL02442BL02443BL01747BL02439BL02442BL02439BL02439BL02440BL02442BL02443BL02441BL02441
BHAL272558 BH3901BH3731BH3732BH3441BH3731BH3728BH3729BH3731BH3732BH3730BH2322
BCLA66692 ABC3545ABC3544ABC0410ABC1270ABC3545ABC3643ABC3548ABC3547ABC3545ABC3544ABC3546ABC3546
BCER572264 BCA_0707BCA_0706BCA_0707BCA_0705BCA_0706BCA_0703BCA_0703BCA_0704BCA_0706BCA_0707BCA_0705BCA_0705
BCER405917 BCE_0737BCE_0736BCE_0737BCE_0735BCE_0733BCE_0736BCE_0733BCE_0733BCE_0734BCE_0736BCE_0737BCE_0735BCE_0735
BCER315749 BCER98_0564BCER98_0563BCER98_0564BCER98_0562BCER98_0560BCER98_0563BCER98_0560BCER98_0560BCER98_0561BCER98_0563BCER98_0564BCER98_0562BCER98_0562
BCER288681 BCE33L0579BCE33L0578BCE33L0579BCE33L0577BCE33L0575BCE33L0578BCE33L0575BCE33L0575BCE33L0576BCE33L0578BCE33L0579BCE33L0577BCE33L0577
BCEN331272 BCEN2424_1606BCEN2424_5639BCEN2424_5992BCEN2424_6737BCEN2424_1733BCEN2424_4818BCEN2424_6126BCEN2424_6126BCEN2424_4818BCEN2424_4820BCEN2424_1425BCEN2424_1425
BCEN331271 BCEN_1126BCEN_5220BCEN_5627BCEN_6503BCEN_6346BCEN_3549BCEN_5761BCEN_5761BCEN_3549BCEN_3547BCEN_0943BCEN_0943
BCAN483179 BCAN_B1015BCAN_A1668BCAN_A1667BCAN_B1180BCAN_A1668BCAN_B0007BCAN_B0007BCAN_A1668BCAN_B0875BCAN_A1669BCAN_B1180
BANT592021 BAA_0753BAA_0752BAA_0753BAA_0751BAA_0749BAA_0752BAA_0749BAA_0749BAA_0750BAA_0752BAA_0753BAA_0751BAA_0751
BANT568206 BAMEG_3917BAMEG_3918BAMEG_3917BAMEG_3919BAMEG_3921BAMEG_3918BAMEG_3921BAMEG_3921BAMEG_3920BAMEG_3918BAMEG_3917BAMEG_3919BAMEG_3919
BANT261594 GBAA0669GBAA0668GBAA0669GBAA0667GBAA0665GBAA0668GBAA0665GBAA0665GBAA0666GBAA0668GBAA0669GBAA0667GBAA0667
BANT260799 BAS0636BAS0635BAS0636BAS0634BAS0632BAS0635BAS0632BAS0632BAS0633BAS0635BAS0636BAS0634BAS0634
BAMY326423 RBAM_033130RBAM_033120RBAM_033130RBAM_033110RBAM_033090RBAM_033120RBAM_033090RBAM_033090RBAM_033100RBAM_033120RBAM_033130RBAM_033110RBAM_033110
BAMB398577 BAMMC406_1522BAMMC406_1253BAMMC406_5924BAMMC406_6035BAMMC406_1383BAMMC406_4722BAMMC406_1383BAMMC406_1383BAMMC406_4722BAMMC406_4724BAMMC406_1344BAMMC406_1344
BAMB339670 BAMB_1503BAMB_6336BAMB_6193BAMB_6335BAMB_1343BAMB_4199BAMB_1343BAMB_1343BAMB_4199BAMB_4201BAMB_4447BAMB_1305
ASAL382245 ASA_1968ASA_1969ASA_2140ASA_0215ASA_0900ASA_1969ASA_0900ASA_1967ASA_1971ASA_1969ASA_1968ASA_2395ASA_0215
APLE434271 APJL_1703APJL_1702APJL_1703APJL_1957APJL_1704APJL_1702APJL_1704APJL_1704APJL_1700APJL_1702APJL_1703APJL_1701APJL_1451
APLE416269 APL_1672APL_1671APL_1672APL_1910APL_1673APL_1671APL_1673APL_1673APL_1669APL_1671APL_1672APL_1670APL_1419
AHYD196024 AHA_2312AHA_2311AHA_2312AHA_2310AHA_3406AHA_2311AHA_3406AHA_2313AHA_2309AHA_2311AHA_2312AHA_2310AHA_4099


Organism features enriched in list (features available for 133 out of the 140 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.003689136112
Disease:Anthrax 0.002614844
Disease:Bubonic_plague 0.000129066
Disease:Dysentery 0.002721456
Disease:Gastroenteritis 0.00004041013
Endospores:No 0.000060830211
Endospores:Yes 4.058e-72853
GC_Content_Range4:0-40 0.000210632213
GC_Content_Range4:40-60 3.126e-776224
GC_Content_Range7:30-40 0.004898627166
GC_Content_Range7:40-50 0.007573736117
GC_Content_Range7:50-60 0.000066640107
GC_Content_Range7:60-70 0.007144921134
Genome_Size_Range5:0-2 2.147e-136155
Genome_Size_Range5:2-4 0.000554830197
Genome_Size_Range5:4-6 9.946e-1173184
Genome_Size_Range5:6-10 6.871e-62447
Genome_Size_Range9:1-2 6.277e-106128
Genome_Size_Range9:2-3 0.006618118120
Genome_Size_Range9:4-5 0.00015623696
Genome_Size_Range9:5-6 5.980e-63788
Genome_Size_Range9:6-8 0.00009971938
Gram_Stain:Gram_Neg 0.000843491333
Habitat:Aquatic 0.00256381191
Habitat:Host-associated 0.009698037206
Habitat:Multiple 0.000439056178
Habitat:Terrestrial 0.00085261531
Motility:No 1.669e-713151
Motility:Yes 9.094e-785267
Oxygen_Req:Aerobic 0.007962632185
Oxygen_Req:Anaerobic 0.009776315102
Oxygen_Req:Facultative 4.313e-1178201
Pathogenic_in:Human 0.000162166213
Pathogenic_in:No 0.000506636226
Shape:Coccus 0.0000136582
Shape:Rod 1.538e-13114347



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ORGANISMS CONTAINING AT MOST 2 GENES FROM THE GROUP:

Total number of orgs: 359
Effective number of orgs (counting one per cluster within 468 clusters): 290

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A1
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110181
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103311
XFAS405440 ncbi Xylella fastidiosa M121
XFAS183190 ncbi Xylella fastidiosa Temecula11
XFAS160492 ncbi Xylella fastidiosa 9a5c1
XCAM487884 Xanthomonas campestris pv. paulliniae1
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-101
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80041
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339131
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3061
XAUT78245 ncbi Xanthobacter autotrophicus Py21
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/271
TWHI203267 ncbi Tropheryma whipplei Twist1
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB82
TTHE262724 ncbi Thermus thermophilus HB271
TPEN368408 ncbi Thermofilum pendens Hrk 52
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TFUS269800 ncbi Thermobifida fusca YX1
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354051
TCRU317025 ncbi Thiomicrospira crunogena XCL-21
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STRO369723 ncbi Salinispora tropica CNB-4402
STOK273063 ncbi Sulfolobus tokodaii 71
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)2
SSP321327 ncbi Synechococcus sp. JA-3-3Ab2
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P22
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SONE211586 ncbi Shewanella oneidensis MR-12
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F11
SLAC55218 Ruegeria lacuscaerulensis2
SGOR29390 Streptococcus gordonii Challis1
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2172
SDEG203122 ncbi Saccharophagus degradans 2-401
SBAL402882 ncbi Shewanella baltica OS1852
SBAL399599 ncbi Shewanella baltica OS1952
SARE391037 ncbi Salinispora arenicola CNS-2052
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-32
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316056 ncbi Rhodopseudomonas palustris BisB180
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMET266264 ncbi Ralstonia metallidurans CH340
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PRUM264731 ncbi Prevotella ruminicola 232
PNAP365044 ncbi Polaromonas naphthalenivorans CJ22
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41842
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PATL342610 ncbi Pseudoalteromonas atlantica T6c1
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM22
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM50
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-21
NSP103690 ncbi Nostoc sp. PCC 71202
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101521
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H1
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.2
MSED399549 ncbi Metallosphaera sedula DSM 53482
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP2
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2321
MHYO262722 ncbi Mycoplasma hyopneumoniae 74481
MHYO262719 ncbi Mycoplasma hyopneumoniae J1
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MFLA265072 ncbi Methylobacillus flagellatus KT1
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1042
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53342
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LMON265669 ncbi Listeria monocytogenes 4b F23652
LMON169963 ncbi Listeria monocytogenes EGD-e2
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82932
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112622
LHEL405566 ncbi Lactobacillus helveticus DPC 45712
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118422
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3652
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
JSP375286 ncbi Janthinobacterium sp. Marseille0
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HNEP81032 Hyphomonas neptunium1
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba1
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA1
GOXY290633 ncbi Gluconobacter oxydans 621H1
GMET269799 ncbi Geobacter metallireducens GS-150
GFOR411154 ncbi Gramella forsetii KT08031
GBET391165 ncbi Granulibacter bethesdensis CGDNIH11
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FMAG334413 ncbi Finegoldia magna ATCC 293281
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a1
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.1
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC31964 ncbi Clavibacter michiganensis sepedonicus2
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF82
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4111
CJAP155077 Cellvibrio japonicus1
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29012
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1111
CBUR360115 ncbi Coxiella burnetii RSA 3311
CBUR227377 ncbi Coxiella burnetii RSA 4931
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1351
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPET94624 Bordetella petrii0
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi1
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B312
BBRO257310 ncbi Bordetella bronchiseptica RB501
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1001
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs2
ANAE240017 Actinomyces oris MG11
AMAR329726 ncbi Acaryochloris marina MBIC110171
AMAR234826 ncbi Anaplasma marginale St. Maries0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N0
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7342   G7340   EG12517   EG12275   EG12028   EG11958   EG11646   EG10818   EG10817   EG10816   EG10815   EG10814   EG10592   
ZMOB264203
XORY360094 XOOORF_1122
XORY342109 XOO3565
XORY291331 XOO3785
XFAS405440 XFASM12_1863
XFAS183190 PD_1698
XFAS160492 XF0366
XCAM487884 XCC-B100_3589
XCAM316273 XCAORF_0942
XCAM314565 XC_3468
XCAM190485 XCC0764
XAXO190486 XAC0818
XAUT78245 XAUT_2413
WSUC273121
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496 TW0417
TWHI203267 TW330
TVOL273116
TTUR377629
TTHE300852 TTHA0431TTHA0431
TTHE262724 TT_C0063
TPEN368408 TPEN_1649TPEN_1649
TPAL243276 TP_0685
TKOD69014 TK1843
TFUS269800 TFU_0259
TELO197221 TLL1428
TDEN326298
TDEN292415
TDEN243275 TDE_2216
TCRU317025 TCR_0505
TACI273075
SWOL335541 SWOL_1264
STRO369723 STROP_1202STROP_1202
STOK273063 ST2328
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP387093
SSP321332 CYB_1353CYB_1353
SSP321327 CYA_2257CYA_2257
SSP1148
SSP1131
SSOL273057 SSO0004SSO0004
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SONE211586 SO_0810SO_0810
SMUT210007
SMAR399550 SMAR_0007
SLAC55218 SL1157_2716SL1157_1099
SGOR29390 SGO_1897
SFUM335543
SELO269084
SDEN318161 SDEN_0939SDEN_0939
SDEG203122 SDE_0766
SBAL402882 SHEW185_3648SHEW185_3648
SBAL399599 SBAL195_3771SBAL195_3771
SARE391037 SARE_1094SARE_1094
SALA317655
SACI56780
SACI330779 SACI_0272
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RPOM246200 SPO_2060SPO_0013
RPAL316058
RPAL316057
RPAL316056
RPAL316055
RPAL258594
RMET266264
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSTU379731
PSP56811
PSP312153
PRUM264731 GFRORF2271GFRORF2608
PNAP365044 PNAP_2604PNAP_2602
PMEN399739
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616 PISL_1117PISL_1117
PINT246198 PIN_A0148
PHOR70601
PHAL326442
PGIN242619
PFUR186497
PCRY335284
PCAR338963
PATL342610 PATL_3505
PAST100379
PARS340102 PARS_0078
PARC259536
PAER178306 PAE0835PAE0835
PABY272844
OTSU357244
OCAR504832
NWIN323098
NSP387092 NIS_1448
NSP103690 ALL1784ALL1784
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NFAR247156 NFA13700
NEUT335283
NEUR228410
NARO279238
MXAN246197
MVAN350058 MVAN_3935
MTUB419947 MRA_2462
MTUB336982 TBFG_12463
MTHE349307
MTHE187420 MTH404
MTBRV RV2436
MTBCDC MT2511
MSYN262723
MSTA339860
MSP409 M446_5850M446_3132
MSED399549 MSED_0185MSED_0185
MPUL272635 MYPU_3440MYPU_6000
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748 MMOB0140
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358 MHP512
MHYO262722 MHP7448_0514
MHYO262719 MHJ_0512
MHUN323259
MGIL350054 MFLV_2643
MGEN243273
MFLO265311 MFL642
MFLA265072 MFLA_2300
MEXT419610
MCAP340047
MCAP243233
MBUR259564
MBOV410289 BCG_2455
MBOV233413 MB2462
MBAR269797
MAVI243243 MAV_0347MAV_0347
MART243272
MAQU351348
MAER449447
MAEO419665
MACE188937
MABS561007 MAB_1617C
LWEL386043 LWE2293LWE2293
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LMON265669 LMOF2365_2311LMOF2365_2311
LMON169963 LMO2341LMO2341
LMES203120 LEUM_0691LEUM_0691
LINT363253
LINT267671
LINT189518
LINN272626 LIN2435LIN2435
LHEL405566 LHV_0611LHV_0611
LDEL390333 LDB0529LDB0529
LDEL321956 LBUL_0470LBUL_0470
LBOR355277
LBOR355276
LBIF456481
LBIF355278
JSP375286
ILOI283942
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963 JHP0792
HPYL357544 HPAG1_0841
HPY HP0858
HNEP81032 HNE_0207
HMUK485914
HMAR272569
HHEP235279
HHAL349124
HDUC233412
HBUT415426
HARS204773
HACI382638 HAC_1221
GURA351605
GSUL243231 GSU_2085
GOXY290633 GOX2084
GMET269799
GFOR411154 GFO_0006
GBET391165 GBCGDNIH1_1810
FTUL458234
FTUL418136
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855 FRANEAN1_7032
FSP106370
FRANT
FMAG334413 FMG_1548
FJOH376686
FALN326424 FRAAL3962
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DOLE96561
DNOD246195
DHAF138119
DETH243164
DDES207559
DARO159087
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSP78 CAUL_1363
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992
CMUR243161
CMIC31964 CMS0996CMS0201
CMET456442
CMAQ397948
CKOR374847 KCR_1208KCR_1208
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537 JK2077
CJAP155077 CJA_3019
CHYD246194 CHY_0076CHY_0076
CHUT269798
CHOM360107
CFET360106
CFEL264202
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922 COXBU7E912_0342
CBUR360115 COXBURSA331_A1838
CBUR227377 CBU_1655
CBLO291272
CBLO203907
CABO218497
BTUR314724 BT0630
BTRI382640
BSP107806
BQUI283165
BPET94624
BPER257313
BPAR257311
BHER314723
BHEN283166
BGAR290434 BG0651
BFRA295405 BF3339
BFRA272559 BF3174
BCIC186490
BBUR224326 BB_0630BB_0630
BBRO257310 BB2712
BBAC360095
BBAC264462 BD0720
BAPH372461
BAPH198804
BAFZ390236 BAPKO_0672
AYEL322098
AURANTIMONAS
ASP76114
ASP62928
ASP232721
APHA212042
APER272557
AORE350688 CLOS_0651CLOS_0651
ANAE240017 ANA_1770
AMAR329726 AM1_4844
AMAR234826
AFUL224325 AF_0356
AFER243159
AEHR187272
ADEH290397
ABUT367737
ABOR393595
ABAU360910
AAEO224324


Organism features enriched in list (features available for 335 out of the 359 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 8.669e-6117
Arrangment:Pairs 2.050e-1133112
Disease:Gastroenteritis 0.0099340313
Disease:Wide_range_of_infections 0.00210041111
Endospores:No 0.0015800137211
Endospores:Yes 1.742e-91053
GC_Content_Range4:0-40 0.0006223140213
GC_Content_Range7:30-40 0.0047382108166
GC_Content_Range7:50-60 0.002332449107
Genome_Size_Range5:0-2 8.611e-25140155
Genome_Size_Range5:4-6 2.026e-1267184
Genome_Size_Range5:6-10 3.278e-9847
Genome_Size_Range9:0-1 2.001e-72727
Genome_Size_Range9:1-2 2.572e-17113128
Genome_Size_Range9:4-5 1.129e-63496
Genome_Size_Range9:5-6 0.00002253388
Genome_Size_Range9:6-8 5.323e-8638
Gram_Stain:Gram_Pos 1.401e-857150
Habitat:Aquatic 0.00001507091
Habitat:Host-associated 0.0040155132206
Habitat:Multiple 3.581e-775178
Habitat:Specialized 0.00496963953
Habitat:Terrestrial 0.0001963831
Motility:Yes 0.0014944137267
Optimal_temp.:- 0.0077646160257
Optimal_temp.:25-35 0.0001021114
Optimal_temp.:30-37 0.0003509318
Oxygen_Req:Anaerobic 0.006287569102
Oxygen_Req:Facultative 2.437e-1178201
Oxygen_Req:Microaerophilic 0.00352881618
Pathogenic_in:Human 0.0012124106213
Shape:Irregular_coccus 0.00006801717
Shape:Rod 5.092e-13158347
Shape:Sphere 0.00031851819
Shape:Spiral 8.671e-83334
Temp._range:Hyperthermophilic 0.00699791923
Temp._range:Mesophilic 0.0010210258473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 53
Effective number of orgs (counting one per cluster within 468 clusters): 42

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
LACI272621 ncbi Lactobacillus acidophilus NCFM 5.100e-768412
CTET212717 ncbi Clostridium tetani E88 1.001e-6100213
PSP117 Pirellula sp. 2.115e-6106113
TLET416591 ncbi Thermotoga lettingae TMO 3.255e-679912
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 33223 0.0000105119913
LLAC272623 ncbi Lactococcus lactis lactis Il1403 0.000014990812
TSP1755 Thermoanaerobacter sp. 0.0000175124713
RXYL266117 ncbi Rubrobacter xylanophilus DSM 9941 0.0000292129713
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB4 0.0000310130313
PMOB403833 ncbi Petrotoga mobilis SJ95 0.000097580111
SCO ncbi Streptomyces coelicolor A3(2) 0.0001196144513
CNOV386415 ncbi Clostridium novyi NT 0.0001280108912
TPET390874 ncbi Thermotoga petrophila RKU-1 0.000150383411
SAVE227882 ncbi Streptomyces avermitilis MA-4680 0.0001564147513
TMAR243274 ncbi Thermotoga maritima MSB8 0.000164384111
OIHE221109 ncbi Oceanobacillus iheyensis HTE831 0.0001931149913
HINF374930 ncbi Haemophilus influenzae PittEE 0.0001965150113
BXEN266265 ncbi Burkholderia xenovorans LB400 0.0002020113212
SAGA211110 ncbi Streptococcus agalactiae NEM316 0.000224786611
SAGA208435 ncbi Streptococcus agalactiae 2603V/R 0.000233286911
SAGA205921 ncbi Streptococcus agalactiae A909 0.000236187011
HSOM228400 ncbi Haemophilus somnus 2336 0.0003475156813
HMOD498761 ncbi Heliobacterium modesticaldum Ice1 0.0003675119112
HINF281310 ncbi Haemophilus influenzae 86-028NP 0.0003806157913
BCER315749 ncbi Bacillus cytotoxicus NVH 391-98 0.0003934158313
BPUM315750 ncbi Bacillus pumilus SAFR-032 0.0004449159813
HINF71421 ncbi Haemophilus influenzae Rd KW20 0.0004672160413
GKAU235909 ncbi Geobacillus kaustophilus HTA426 0.0005626162713
LCAS321967 ncbi Lactobacillus casei ATCC 334 0.000609495111
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B 0.0006368124812
BAMY326423 ncbi Bacillus amyloliquefaciens FZB42 0.0006811165113
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-2 0.0007908167013
CDIF272563 ncbi Clostridium difficile 630 0.0011349131112
BSUB ncbi Bacillus subtilis subtilis 168 0.0012252172713
BCER288681 ncbi Bacillus cereus E33L 0.0013818174313
CBOT515621 ncbi Clostridium botulinum Ba4 str. 657 0.0013914133412
BLIC279010 ncbi Bacillus licheniformis ATCC 14580 0.0014560175013
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-27 0.0014778175213
BANT260799 ncbi Bacillus anthracis Sterne 0.0015800176113
BCER405917 Bacillus cereus W 0.0016036176313
BANT261594 ncbi Bacillus anthracis Ames Ancestor 0.0016155176413
BANT568206 ncbi Bacillus anthracis CDC 684 0.0016395176613
BWEI315730 ncbi Bacillus weihenstephanensis KBAB4 0.0016517176713
BANT592021 ncbi Bacillus anthracis A0248 0.0018308178113
DRED349161 ncbi Desulfotomaculum reducens MI-1 0.0019331137212
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL03 0.0022277180813
APLE416269 ncbi Actinobacillus pleuropneumoniae L20 0.0023598181613
PMUL272843 ncbi Pasteurella multocida multocida Pm70 0.0025350182613
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 15305 0.0030407110711
PACN267747 ncbi Propionibacterium acnes KPA171202 0.003700186710
SERY405948 ncbi Saccharopolyspora erythraea NRRL 2338 0.0037786145312
HSOM205914 ncbi Haemophilus somnus 129PT 0.0067928152812
CGLU196627 ncbi Corynebacterium glutamicum ATCC 13032 0.008109094210


Names of the homologs of the genes in the group in each of these orgs
  G7342   G7340   EG12517   EG12275   EG12028   EG11958   EG11646   EG10818   EG10817   EG10816   EG10815   EG10814   EG10592   
LACI272621 LBA1481LBA1481LBA1483LBA1485LBA1482LBA1485LBA0587LBA1484LBA1482LBA1481LBA1483LBA1483
CTET212717 CTC_00907CTC_00906CTC_02347CTC_02350CTC_00909CTC_02349CTC_00909CTC_00909CTC_02351CTC_02349CTC_02347CTC_02350CTC_00861
PSP117 RB5973RB3497RB3493RB3496RB3499RB3497RB3499RB3499RB3491RB3497RB3493RB3496RB3496
TLET416591 TLET_0359TLET_0389TLET_1327TLET_2030TLET_0185TLET_0187TLET_1905TLET_0189TLET_1328TLET_1325TLET_1327TLET_1327
TPSE340099 TETH39_2038TETH39_2039TETH39_2038TETH39_2040TETH39_1953TETH39_2039TETH39_1953TETH39_2042TETH39_2041TETH39_2039TETH39_2038TETH39_2040TETH39_2040
LLAC272623 L82310L83296L82310L84240L83296L86157L86157L85737L83296L82310L84240L84240
TSP1755 TETH514_0166TETH514_0158TETH514_0166TETH514_0157TETH514_0258TETH514_0165TETH514_0258TETH514_0162TETH514_0163TETH514_0165TETH514_0166TETH514_0164TETH514_0157
RXYL266117 RXYL_0948RXYL_1889RXYL_0948RXYL_0946RXYL_0949RXYL_3002RXYL_0491RXYL_0949RXYL_0950RXYL_0947RXYL_0948RXYL_0946RXYL_0946
TTEN273068 TTE0765TTE0205TTE0206TTE0204TTE0326TTE0764TTE0326TTE0202TTE0203TTE0205TTE0206TTE0204TTE0763
PMOB403833 PMOB_0923PMOB_1602PMOB_0923PMOB_0921PMOB_0899PMOB_1602PMOB_0899PMOB_0924PMOB_0920PMOB_0922PMOB_0923
SCO SCO2747SCO2747SCO2747SCO2405SCO2748SCO2747SCO2748SCO2748SCO2749SCO2747SCO2747SCO2746SCO2746
CNOV386415 NT01CX_0162NT01CX_0163NT01CX_0162NT01CX_0164NT01CX_0163NT01CX_0166NT01CX_0166NT01CX_0165NT01CX_0163NT01CX_0162NT01CX_0164NT01CX_0164
TPET390874 TPET_1794TPET_0812TPET_1794TPET_0809TPET_1793TPET_1789TPET_1791TPET_1793TPET_1794TPET_0809TPET_0809
SAVE227882 SAV971SAV1827SAV971SAV5768SAV5317SAV5318SAV5317SAV5317SAV5316SAV5318SAV5318SAV7416SAV5319
TMAR243274 TM_0958TM_0955TM_0958TM_0956TM_0955TM_0960TM_0959TM_0955TM_0958TM_0956TM_0956
OIHE221109 OB2572OB2573OB2572OB2574OB2576OB2573OB2576OB2576OB2575OB2573OB2572OB2574OB2574
HINF374930 CGSHIEE_00470CGSHIEE_06515CGSHIEE_00470CGSHIEE_00480CGSHIEE_00465CGSHIEE_00475CGSHIEE_00465CGSHIEE_00465CGSHIEE_00485CGSHIEE_00475CGSHIEE_00470CGSHIEE_00480CGSHIEE_07945
BXEN266265 BXE_B0573BXE_B1397BXE_B0573BXE_B2620BXE_C1282BXE_B1397BXE_C1282BXE_B0576BXE_C1349BXE_B0894BXE_C1350BXE_C1350
SAGA211110 GBS0113GBS0114GBS0113GBS0115GBS0114GBS0117GBS0116GBS0114GBS0113GBS0115GBS0115
SAGA208435 SAG_0114SAG_0115SAG_0114SAG_0116SAG_0115SAG_0118SAG_0117SAG_0115SAG_0114SAG_0116SAG_0116
SAGA205921 SAK_0166SAK_0167SAK_0166SAK_0168SAK_0167SAK_0170SAK_0169SAK_0167SAK_0166SAK_0168SAK_0168
HSOM228400 HSM_0556HSM_0091HSM_0092HSM_0934HSM_0093HSM_0558HSM_0093HSM_0093HSM_0089HSM_0091HSM_0092HSM_0090HSM_0104
HMOD498761 HM1_2420HM1_2420HM1_2418HM1_2416HM1_2419HM1_2416HM1_2416HM1_2417HM1_2419HM1_2420HM1_2418HM1_2418
HINF281310 NTHI0632NTHI0631NTHI0632NTHI0630NTHI0633NTHI0631NTHI0633NTHI0633NTHI0629NTHI0631NTHI0632NTHI0630NTHI0988
BCER315749 BCER98_0564BCER98_0563BCER98_0564BCER98_0562BCER98_0560BCER98_0563BCER98_0560BCER98_0560BCER98_0561BCER98_0563BCER98_0564BCER98_0562BCER98_0562
BPUM315750 BPUM_3268BPUM_3267BPUM_3268BPUM_3266BPUM_3264BPUM_3267BPUM_3264BPUM_3264BPUM_3265BPUM_3267BPUM_3268BPUM_3266BPUM_3266
HINF71421 HI_0504HI_0503HI_0504HI_1110HI_0505HI_0503HI_0505HI_0505HI_0501HI_0503HI_0504HI_0502HI_0823
GKAU235909 GK1896GK3227GK3226GK1880GK1372GK3227GK1372GK3230GK3229GK3227GK3226GK3228GK1894
LCAS321967 LSEI_0310LSEI_0309LSEI_0310LSEI_0309LSEI_0312LSEI_0312LSEI_0307LSEI_0309LSEI_0310LSEI_0308LSEI_0308
CBOT508765 CLL_A1530CLL_A1531CLL_A1529CLL_A3001CLL_A1530CLL_A3004CLL_A1527CLL_A1528CLL_A1530CLL_A1531CLL_A1529CLL_A1529
BAMY326423 RBAM_033130RBAM_033120RBAM_033130RBAM_033110RBAM_033090RBAM_033120RBAM_033090RBAM_033090RBAM_033100RBAM_033120RBAM_033130RBAM_033110RBAM_033110
GTHE420246 GTNG_3170GTNG_3171GTNG_3170GTNG_1800GTNG_1231GTNG_3171GTNG_1231GTNG_3174GTNG_3173GTNG_3171GTNG_3170GTNG_3172GTNG_3172
CDIF272563 CD0300CD1588CD1589CD0301CD0299CD1588CD0299CD0299CD0302CD0300CD0301CD0301
BSUB BSU35960BSU35950BSU35960BSU35940BSU35920BSU35950BSU35920BSU35920BSU35930BSU35950BSU35960BSU35940BSU35940
BCER288681 BCE33L0579BCE33L0578BCE33L0579BCE33L0577BCE33L0575BCE33L0578BCE33L0575BCE33L0575BCE33L0576BCE33L0578BCE33L0579BCE33L0577BCE33L0577
CBOT515621 CLJ_B1315CLJ_B1313CLJ_B1315CLJ_B1312CLJ_B1209CLJ_B1313CLJ_B1209CLJ_B1671CLJ_B1313CLJ_B1315CLJ_B1312CLJ_B1312
BLIC279010 BL02443BL02442BL02443BL01747BL02439BL02442BL02439BL02439BL02440BL02442BL02443BL02441BL02441
BTHU281309 BT9727_0580BT9727_0579BT9727_0580BT9727_0578BT9727_0576BT9727_0579BT9727_0576BT9727_0576BT9727_0577BT9727_0579BT9727_0580BT9727_0578BT9727_0578
BANT260799 BAS0636BAS0635BAS0636BAS0634BAS0632BAS0635BAS0632BAS0632BAS0633BAS0635BAS0636BAS0634BAS0634
BCER405917 BCE_0737BCE_0736BCE_0737BCE_0735BCE_0733BCE_0736BCE_0733BCE_0733BCE_0734BCE_0736BCE_0737BCE_0735BCE_0735
BANT261594 GBAA0669GBAA0668GBAA0669GBAA0667GBAA0665GBAA0668GBAA0665GBAA0665GBAA0666GBAA0668GBAA0669GBAA0667GBAA0667
BANT568206 BAMEG_3917BAMEG_3918BAMEG_3917BAMEG_3919BAMEG_3921BAMEG_3918BAMEG_3921BAMEG_3921BAMEG_3920BAMEG_3918BAMEG_3917BAMEG_3919BAMEG_3919
BWEI315730 BCERKBAB4_0583BCERKBAB4_0582BCERKBAB4_0583BCERKBAB4_0581BCERKBAB4_0579BCERKBAB4_0582BCERKBAB4_0579BCERKBAB4_0579BCERKBAB4_0580BCERKBAB4_0582BCERKBAB4_0583BCERKBAB4_0581BCERKBAB4_0581
BANT592021 BAA_0753BAA_0752BAA_0753BAA_0751BAA_0749BAA_0752BAA_0749BAA_0749BAA_0750BAA_0752BAA_0753BAA_0751BAA_0751
DRED349161 DRED_2522DRED_2522DRED_2524DRED_2526DRED_2523DRED_2526DRED_2526DRED_2525DRED_2523DRED_2522DRED_2524DRED_2524
APLE434271 APJL_1703APJL_1702APJL_1703APJL_1957APJL_1704APJL_1702APJL_1704APJL_1704APJL_1700APJL_1702APJL_1703APJL_1701APJL_1451
APLE416269 APL_1672APL_1671APL_1672APL_1910APL_1673APL_1671APL_1673APL_1673APL_1669APL_1671APL_1672APL_1670APL_1419
PMUL272843 PM1325PM0154PM0153PM0155PM0152PM0154PM0152PM0152PM0156PM0154PM0153PM0155PM1039
SSAP342451 SSP1392SSP1393SSP1392SSP1393SSP0744SSP0744SSP1395SSP1393SSP1392SSP1394SSP1394
PACN267747 PPA0016PPA0017PPA1211PPA0016PPA1211PPA1211PPA0019PPA0016PPA0017PPA0015
SERY405948 SACE_5660SACE_5660SACE_5660SACE_5659SACE_3234SACE_1882SACE_1271SACE_1271SACE_5660SACE_5660SACE_5659SACE_5659
HSOM205914 HS_0767HS_0584HS_1581HS_0585HS_0225HS_0584HS_0225HS_0225HS_0223HS_0769HS_0767HS_1580
CGLU196627 CG1412CG1413CG1546CG1412CG1546CG1546CG1414CG1412CG1413CG1411


Organism features enriched in list (features available for 50 out of the 53 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 9.482e-62092
Disease:Anthrax 0.000048344
Disease:Fibrinous_and_necrotizing_pleuropneumonia 0.007220622
Disease:Food_poisoning 0.004020449
Disease:Septicemia 0.002192834
Disease:and_meningitis 0.007220622
Disease:and_reproductive_problems 0.007220622
Disease:arthritis 0.007220622
Disease:chronic_bronchitis 0.000596533
Disease:myocarditis 0.007220622
Disease:otitis_media 0.002192834
Disease:sinusitis 0.002192834
Disease:speticemia 0.007220622
Endospores:Yes 9.676e-152453
GC_Content_Range4:0-40 0.000662129213
GC_Content_Range4:60-100 0.00405905145
GC_Content_Range7:30-40 0.001103024166
GC_Content_Range7:60-70 0.00001831134
GC_Content_Range7:70-100 0.0089083411
Genome_Size_Range5:0-2 0.00557226155
Genome_Size_Range5:2-4 0.000411528197
Genome_Size_Range9:2-3 0.003780418120
Genome_Size_Range9:8-10 0.004020449
Gram_Stain:Gram_Neg 0.000035415333
Gram_Stain:Gram_Pos 4.332e-1134150
Habitat:Terrestrial 0.00008381031
Optimal_temp.:65 0.007220622
Pathogenic_in:Porcine 0.007220622
Shape:Branched_filament 0.002192834
Shape:Rod 0.000813940347



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GALACTITOLCAT-PWY (galactitol degradation)73630.5571
PWY-6196 (serine racemization)102710.4997
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))121770.4842
RIBOKIN-PWY (ribose degradation)2791250.4818
GLUTAMINDEG-PWY (glutamine degradation I)191980.4594
PWY-6374 (vibriobactin biosynthesis)77560.4522
XYLCAT-PWY (xylose degradation I)2171040.4458
GLUTDEG-PWY (glutamate degradation II)194970.4435
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50420.4354
PWY0-1295 (pyrimidine ribonucleosides degradation I)2391050.4056
GLUCUROCAT-PWY (β-D-glucuronide and D-glucuronate degradation)208960.4017



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7340   EG12517   EG12275   EG12028   EG11958   EG11646   EG10818   EG10817   EG10816   EG10815   EG10814   EG10592   
G73420.9994590.9995560.9991370.9990660.9994340.999130.9992430.9992010.9994560.9996220.999360.999336
G73400.9995280.9993210.9987370.9996810.9989490.9993610.9994410.9996660.999590.9995270.999305
EG125170.9993480.9988320.9996180.9989270.9993590.9994570.9996140.9997240.9995580.999366
EG122750.9987060.999470.9987520.999210.9994240.9995260.9993470.9996310.999466
EG120280.9988480.999870.9996530.9993640.9990520.9992150.9989890.99874
EG119580.999020.9994270.9995430.9997910.9996860.9996370.999462
EG116460.9998090.9994730.9990950.9993030.9990330.998958
EG108180.9997150.9995510.9995970.9994770.999015
EG108170.9996120.9996190.9996210.999256
EG108160.9997490.9997110.999517
EG108150.9995660.999285
EG108140.999669
EG10592



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PAIRWISE BLAST SCORES:

  G7342   G7340   EG12517   EG12275   EG12028   EG11958   EG11646   EG10818   EG10817   EG10816   EG10815   EG10814   EG10592   
G73420.0f0---------9.5e-9--
G7340-0.0f0-------1.9e-33---
EG12517--0.0f0-------8.6e-29--
EG12275---0.0f0-------3.0e-1131.9e-102
EG12028----0.0f0-5.2e-541.5e-14-----
EG11958-----0.0f0---6.9e-43---
EG11646----5.2e-54-0.0f01.2e-15-----
EG10818-------0.0f0-----
EG10817--------0.0f0----
EG10816---------0.0f0---
EG10815--8.6e-29-------0.0f0--
EG10814---3.0e-113-------0.0f02.7e-112
EG10592---8.0e-97-------1.4e-1080.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- RIBOKIN-PWY (ribose degradation) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.154, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9990 EG10818 (rbsK) RIBOKIN-MONOMER (ribokinase)
   *in cand* 0.9995 0.9992 EG10817 (rbsD) EG10817-MONOMER (ribose pyranase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9987 EG10592 (mglA) MGLA-MONOMER (MglA)
   *in cand* 0.9995 0.9990 EG10814 (rbsA) RBSA-MONOMER (RbsA)
   *in cand* 0.9996 0.9992 EG10815 (rbsB) RBSB-MONOMER (RbsB)
   *in cand* 0.9996 0.9991 EG10816 (rbsC) RBSC-MONOMER (RbsC)
   *in cand* 0.9993 0.9988 EG11646 (pscK) EG11646-MONOMER (predicted pseudouridine kinase)
   *in cand* 0.9995 0.9988 EG11958 (alsC) YJCV-MONOMER (AlsC)
   *in cand* 0.9992 0.9987 EG12028 (yeiI) EG12028-MONOMER (predicted kinase)
   *in cand* 0.9993 0.9987 EG12275 (xylG) XYLG-MONOMER (XylG)
   *in cand* 0.9995 0.9988 EG12517 (ytfQ) YTFQ-MONOMER (YtfQ)
   *in cand* 0.9994 0.9987 G7340 (yphD) YPHD-MONOMER (YphD)
   *in cand* 0.9994 0.9991 G7342 (yphF) G7342-MONOMER (YphF)

- ABC-60-CPLX (YphD/YphE/YphF ABC transporter) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.154, average score: 0.999)
  Genes in pathway or complex:
             0.9991 0.9981 G7341 (yphE) YPHE-MONOMER (YphE)
   *in cand* 0.9994 0.9991 G7342 (yphF) G7342-MONOMER (YphF)
   *in cand* 0.9994 0.9987 G7340 (yphD) YPHD-MONOMER (YphD)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9987 EG10592 (mglA) MGLA-MONOMER (MglA)
   *in cand* 0.9995 0.9990 EG10814 (rbsA) RBSA-MONOMER (RbsA)
   *in cand* 0.9996 0.9992 EG10815 (rbsB) RBSB-MONOMER (RbsB)
   *in cand* 0.9996 0.9991 EG10816 (rbsC) RBSC-MONOMER (RbsC)
   *in cand* 0.9995 0.9992 EG10817 (rbsD) EG10817-MONOMER (ribose pyranase)
   *in cand* 0.9995 0.9990 EG10818 (rbsK) RIBOKIN-MONOMER (ribokinase)
   *in cand* 0.9993 0.9988 EG11646 (pscK) EG11646-MONOMER (predicted pseudouridine kinase)
   *in cand* 0.9995 0.9988 EG11958 (alsC) YJCV-MONOMER (AlsC)
   *in cand* 0.9992 0.9987 EG12028 (yeiI) EG12028-MONOMER (predicted kinase)
   *in cand* 0.9993 0.9987 EG12275 (xylG) XYLG-MONOMER (XylG)
   *in cand* 0.9995 0.9988 EG12517 (ytfQ) YTFQ-MONOMER (YtfQ)

- ABC-28-CPLX (ribose ABC transporter) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.231, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9992 EG10815 (rbsB) RBSB-MONOMER (RbsB)
   *in cand* 0.9996 0.9991 EG10816 (rbsC) RBSC-MONOMER (RbsC)
   *in cand* 0.9995 0.9990 EG10814 (rbsA) RBSA-MONOMER (RbsA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9987 EG10592 (mglA) MGLA-MONOMER (MglA)
   *in cand* 0.9995 0.9992 EG10817 (rbsD) EG10817-MONOMER (ribose pyranase)
   *in cand* 0.9995 0.9990 EG10818 (rbsK) RIBOKIN-MONOMER (ribokinase)
   *in cand* 0.9993 0.9988 EG11646 (pscK) EG11646-MONOMER (predicted pseudouridine kinase)
   *in cand* 0.9995 0.9988 EG11958 (alsC) YJCV-MONOMER (AlsC)
   *in cand* 0.9992 0.9987 EG12028 (yeiI) EG12028-MONOMER (predicted kinase)
   *in cand* 0.9993 0.9987 EG12275 (xylG) XYLG-MONOMER (XylG)
   *in cand* 0.9995 0.9988 EG12517 (ytfQ) YTFQ-MONOMER (YtfQ)
   *in cand* 0.9994 0.9987 G7340 (yphD) YPHD-MONOMER (YphD)
   *in cand* 0.9994 0.9991 G7342 (yphF) G7342-MONOMER (YphF)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10814 EG10815 EG10816 EG10817 EG10818 (centered at EG10816)
EG10592 (centered at EG10592)
EG11646 (centered at EG11646)
EG11958 (centered at EG11958)
EG12028 (centered at EG12028)
EG12275 (centered at EG12275)
EG12517 (centered at EG12517)
G7340 G7342 (centered at G7342)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7342   G7340   EG12517   EG12275   EG12028   EG11958   EG11646   EG10818   EG10817   EG10816   EG10815   EG10814   EG10592   
178/623163/623198/623192/623229/623194/623250/623306/623152/623177/623193/623176/623179/623
AAUR290340:2:Tyes515-51585132320-3232-517515--
AAVE397945:0:Tyes2-20---19091910-1905--
ABAC204669:0:Tyes---1-0-----11
ACAU438753:0:Tyes--3--1----3-0
ACEL351607:0:Tyes-425----00-----
ACRY349163:8:Tyes0-1719--2-2386-562561--
AFUL224325:0:Tyes----0--------
AHYD196024:0:Tyes3231106321063402311691
ALAI441768:0:Tyes----0-00-----
AMAR329726:9:Tyes0------------
AMET293826:0:Tyes-0-2306241129241--129-2306128
ANAE240017:0:Tyes-------0-----
AORE350688:0:Tyes----0-0------
APLE416269:0:Tyes2732722735182742722742742702722732710
APLE434271:0:Tno2732722735352742722742742702722732710
ASAL382245:5:Tyes16981699186306701699670169717001699169821100
ASP1667:3:Tyes17651767-1033937176700-1767--1848
ASP62977:0:Tyes----0-00-----
AVAR240292:3:Tyes-1931-1930-193100-1931192919301930
BABO262698:0:Tno---1017--00--34810171017
BABO262698:1:Tno-10--1---1---
BAFZ390236:2:Fyes------0------
BAMB339670:1:Tno-1430142---------
BAMB339670:2:Tno-----0---02246-
BAMB339670:3:Tno210---38-3838----0
BAMB398577:1:Tno--0110---------
BAMB398577:2:Tno-----0---02--
BAMB398577:3:Tno2720--127-127127---8888
BAMY326423:0:Tyes4342030013422
BANT260799:0:Tno4342030013422
BANT261594:2:Tno4342030013422
BANT568206:2:Tyes0102414431022
BANT592021:2:Tno4342030013422
BBAC264462:0:Tyes------0------
BBRO257310:0:Tyes0------------
BBUR224326:21:Fno----0-0------
BCAN483179:0:Tno953--1112--00--820-1112
BCAN483179:1:Tno-10--1---1-2-
BCEN331271:0:Tno--0883730-133133-----
BCEN331271:1:Tno-1657---2---20--
BCEN331271:2:Tno188----------00
BCEN331272:1:Tyes--0742--134134-----
BCEN331272:2:Tyes-820---0---02--
BCEN331272:3:Tyes181---307------00
BCER226900:1:Tyes22583-2-30013-22
BCER288681:0:Tno4342030013422
BCER315749:1:Tyes4342030013422
BCER405917:1:Tyes4342030013422
BCER572264:1:Tno4342-30013422
BCLA66692:0:Tyes-31743173086931743272317731763174317331753175
BFRA272559:1:Tyes--0----------
BFRA295405:0:Tno--0----------
BGAR290434:2:Fyes----0--------
BHAL272558:0:Tyes1594142414251134-1424-142114221424142514230
BJAP224911:0:Fyes4695020922101-1568780780-02092-1569
BLIC279010:0:Tyes3302330133020329833013298329832993301330233003300
BLON206672:0:Tyes--01649--17251380-----
BMAL243160:1:Tno-----0---021149-
BMAL320388:0:Tno--0----------
BMAL320388:1:Tno-----1211---121112130-
BMAL320389:0:Tyes--0----------
BMAL320389:1:Tyes-----2---202394-
BMEL224914:0:Tno---56--00--3585656
BMEL224914:1:Tno-01--0---0---
BMEL359391:0:Tno---999--00--334999999
BMEL359391:1:Tno-10--1---1---
BOVI236:0:Tyes---0---------
BOVI236:1:Tyes-10--1---1-22
BPSE272560:0:Tyes--1150-------00
BPSE272560:1:Tyes43---3903939-02--
BPSE320372:0:Tno--1560-------00
BPSE320372:1:Tno0---55155-5149--
BPSE320373:0:Tno--1700-------00
BPSE320373:1:Tno0---55555-5553--
BPUM315750:0:Tyes4342030013422
BSP36773:0:Tyes----0-00-----
BSP36773:1:Tyes-02324--840---840838--
BSP36773:2:Tyes182--115-------00
BSP376:0:Tyes--392403-404-1030-3943920-
BSUB:0:Tyes4342030013422
BSUI204722:0:Tyes946--1091--00--812-1091
BSUI204722:1:Tyes-10--1---1-2-
BSUI470137:0:Tno916--857--00--780--
BSUI470137:1:Tno-10--1---1-22
BTHA271848:0:Tno-----------01410
BTHA271848:1:Tno135932013193131131-9395--
BTHE226186:0:Tyes--0-1078-10781078-----
BTHU281309:1:Tno4342030013422
BTHU412694:1:Tno4342-30013422
BTUR314724:0:Fyes----0--------
BVIE269482:5:Tyes--1020---------
BVIE269482:6:Tyes-452-------0---
BVIE269482:7:Tyes168---17211717234--16800
BWEI315730:4:Tyes4342030013422
BXEN266265:0:Tyes----0-0--57-5858
BXEN266265:1:Tyes2011120120110-1201-2008--1694--
CACE272562:1:Tyes0-0-------0--
CAULO:0:Tyes-20--2-93-20--
CBEI290402:0:Tyes4425-39241892--03539--392444273895
CBOT36826:1:Tno----0-0372-----
CBOT441770:0:Tyes----0-0379-----
CBOT441771:0:Tno----0-0378-----
CBOT441772:1:Tno----0-0393-----
CBOT498213:1:Tno----0-0406-----
CBOT508765:1:Tyes-342146431467013422
CBOT515621:2:Tyes10310110310001010449-101103100100
CBOT536232:0:Tno----0-0465-----
CBUR227377:1:Tyes----0--------
CBUR360115:1:Tno----0--------
CBUR434922:2:Tno----0--------
CDIF272563:1:Tyes11322132320132200-3122
CDIP257309:0:Tyes----0-00-----
CEFF196164:0:Fyes----0-00-----
CGLU196627:0:Tyes-12-1171117117312-0
CHYD246194:0:Tyes----0-0------
CJAP155077:0:Tyes--0----------
CJEI306537:0:Tyes-------0-----
CKOR374847:0:Tyes----0--0-----
CMIC31964:2:Tyes---763---0-----
CMIC443906:2:Tyes--0839---530-----
CNOV386415:0:Tyes0102-14431022
CPER195102:1:Tyes---2891412881412912902882872890
CPER195103:0:Tno---323177322177325324322-3230
CPER289380:3:Tyes--251253118-118255254-2512530
CPHY357809:0:Tyes99--10101000777---9681197
CSAL290398:0:Tyes101--0-1519-01-681
CSP501479:2:Fyes-0-----------
CSP501479:7:Fyes---290---0-----
CSP501479:8:Fyes----0--------
CSP78:2:Tyes-------0-----
CTET212717:0:Tyes414013641366431365434313671365136413660
CVIO243365:0:Tyes0102-14431022
DGEO319795:0:Tyes-279160------279-00
DGEO319795:1:Tyes----0-0710-----
DPSY177439:2:Tyes----0-00-----
DRAD243230:2:Tyes-------0-----
DRAD243230:3:Tyes----0-0------
DRED349161:0:Tyes0-02414431022
DSHI398580:5:Tyes901----8990440---900-
ECAR218491:0:Tyes-2429491414784402311
ECOL199310:0:Tno3813792601167812237216196719631965196619640
ECOL316407:0:Tno3993972058154511191517135413581356135513570
ECOL331111:6:Tno3703682253155618175518175717531755175617540
ECOL362663:0:Tno3593572276148212115918176017571483175917580
ECOL364106:1:Tno4454432391167613187318187518711873187418720
ECOL405955:2:Tyes4284262274152810206915170316991701170217000
ECOL409438:6:Tyes4274252181145812202818165816541656165716550
ECOL413997:0:Tno3673652060157311191917157615721574157515730
ECOL439855:4:Tno3963942310153411216117176117571759176017580
ECOL469008:0:Tno022642314136627833603138-314031393141376
ECOL481805:0:Tno998100036490136038061355413241364134413341351371
ECOL585034:0:Tno3713692174148014167720167916751677167816760
ECOL585035:0:Tno4164142429164314182619182818241826182718250
ECOL585055:0:Tno4284262336159514179020179217881790179117890
ECOL585056:2:Tno3873852264158914178620178817841786178717850
ECOL585057:0:Tno455453242018021942223916207520712073207420720
ECOL585397:0:Tno3773752425180513218618180818041806180718050
ECOL83334:0:Tno3823802237144811210017169316891691169216900
ECOLI:0:Tno4114092111143811196717163016261628162916270
ECOO157:0:Tno3823802207146511206517170517011703170417020
EFAE226185:3:Tyes----1-110----
EFER585054:1:Tyes29018012048180011202718180317991801180218000
ESP42895:1:Tyes248138681271386603866386638703868386738692480
FALN326424:0:Tyes-------0-----
FMAG334413:1:Tyes-------0-----
FNOD381764:0:Tyes---8080-0------
FNUC190304:0:Tyes---0-------00
FPHI484022:1:Tyes----0-00-----
FSP1855:0:Tyes----------0--
FTUL401614:0:Tyes----0-00-----
GBET391165:0:Tyes-------0-----
GFOR411154:0:Tyes--0----------
GKAU235909:1:Tyes5371893189252101893018961895189318921894535
GOXY290633:5:Tyes-------0-----
GSUL243231:0:Tyes------0------
GTHE420246:1:Tyes191219131912557019130191619151913191219141914
GVIO251221:0:Tyes09360-152693615261526-9360--
HACI382638:1:Tyes----0--------
HAUR316274:2:Tyes-154701546135215471352---83--
HCHE349521:0:Tyes--0121512542151114-1254125211
HINF281310:0:Tyes323142440231337
HINF374930:0:Tyes1105513020042131311
HINF71421:0:Tno32359642440231319
HMOD498761:0:Tyes4-42030013422
HNEP81032:0:Tyes-------0-----
HPY:0:Tno----0--------
HPYL357544:1:Tyes----0--------
HPYL85963:0:Tno----0--------
HSOM205914:1:Tyes54736613563673366330549547-1355
HSOM228400:0:Tno47623862447844023115
JSP290400:1:Tyes984989984-1899869870--984484985
KPNE272620:2:Tyes0266131182448266326612663266326592661266226601068
KRAD266940:2:Fyes-013079-0-483-----
LACI272621:0:Tyes840-8408428448418440843841840842842
LBRE387344:2:Tyes------00148----
LCAS321967:1:Tyes323--25502311
LCHO395495:0:Tyes0-24972382-2381---2495140024962496
LDEL321956:0:Tyes------00-----
LDEL390333:0:Tyes------00-----
LGAS324831:0:Tyes------00463----
LHEL405566:0:Tyes------00-----
LINN272626:1:Tno----0-0------
LJOH257314:0:Tyes------00421----
LLAC272622:5:Tyes0-01--332-011
LLAC272623:0:Tyes0102-14431022
LMES203120:1:Tyes------00-----
LMON169963:0:Tno----0-0------
LMON265669:0:Tyes----0-0------
LPLA220668:0:Tyes----1-110----
LREU557436:0:Tyes------001----
LSAK314315:0:Tyes----55-5610----
LSPH444177:1:Tyes----508-5080-----
LWEL386043:0:Tyes----0-0------
LXYL281090:0:Tyes1808-18080---1368--1808--
MABS561007:1:Tyes-------0-----
MAVI243243:0:Tyes----0--0-----
MBOV233413:0:Tno-------0-----
MBOV410289:0:Tno-------0-----
MFLA265072:0:Tyes-------0-----
MFLO265311:0:Tyes-------0-----
MGIL350054:3:Tyes-------0-----
MHYO262719:0:Tyes---0---------
MHYO262722:0:Tno---0---------
MHYO295358:0:Tno---0---------
MLOT266835:2:Tyes607078778644050165806712-553978627904405
MMOB267748:0:Tyes---0---------
MPUL272635:0:Tyes---0----272----
MSED399549:0:Tyes------00-----
MSME246196:0:Tyes2277227970-2449-2859-24491381--
MSP164756:1:Tno1-0--2-770--0--
MSP164757:0:Tno1-0--2-746--0--
MSP189918:2:Tyes1-0--2-800--0--
MSP266779:3:Tyes--2883043528854352748--2883-0
MSP400668:0:Tyes160533720303362687160326870-4561605-455
MSP409:2:Tyes------26350-----
MSUC221988:0:Tyes160314116030225141225225-14116030603
MTBCDC:0:Tno-------0-----
MTBRV:0:Tno-------0-----
MTHE187420:0:Tyes----0--------
MTHE264732:0:Tyes02761375-2---2011
MTUB336982:0:Tno-------0-----
MTUB419947:0:Tyes-------0-----
MVAN350058:0:Tyes-------0-----
NFAR247156:2:Tyes-------0-----
NSP103690:6:Tyes------00-----
NSP35761:1:Tyes---311454604546472-----
NSP387092:0:Tyes----0--------
OANT439375:4:Tyes---68-71610941094-716-00
OANT439375:5:Tyes201150-------2--
OIHE221109:0:Tyes0102414431022
PACN267747:0:Tyes-12-1204112041204412-0
PAER178306:0:Tyes----0--0-----
PAER208963:0:Tyes4-4-0-00--4--
PAER208964:0:Tno0-0-4-44--0--
PARS340102:0:Tyes-------0-----
PATL342610:0:Tyes-------0-----
PDIS435591:0:Tyes--0-170-170170-----
PENT384676:0:Tyes0-0-4-445-0--
PFLU205922:0:Tyes0-038542231445-022322232
PFLU216595:1:Tyes1374-26301798163717981798179716371639264264
PFLU220664:0:Tyes490-49049144924454920491491
PING357804:0:Tyes3231424402311
PINT246198:1:Tyes--0----------
PISL384616:0:Tyes----0--0-----
PLUM243265:0:Fyes-231436224362402311
PMOB403833:0:Tyes2468224220682025212324--
PMUL272843:1:Tyes117321302004213887
PNAP365044:8:Tyes-----2----0--
PPEN278197:0:Tyes----440-0440439----
PPRO298386:1:Tyes323-42440231315
PPRO298386:2:Tyes---0---------
PPUT160488:0:Tno0---4-445-0--
PPUT351746:0:Tyes5---1-110-5--
PPUT76869:0:Tno5---1-110-5--
PRUM264731:0:Tyes--0-332--------
PSP117:0:Tyes1465413545504133
PSP296591:2:Tyes-----99700--996--
PSYR205918:0:Tyes0180224972114373018021388138813891802138424962496
PSYR223283:2:Tyes27-1097620-109500110952710961096
RCAS383372:0:Tyes--0-2324-23242856--0--
RDEN375451:4:Tyes--0--79914231423---800-
RETL347834:2:Tyes-------0-----
RETL347834:4:Tyes---------0---
RETL347834:5:Tyes177625531463252817005921700---033433343
REUT264198:2:Tyes0---------0--
REUT264198:3:Tyes---1-0---0-11
REUT381666:1:Tyes---0-1---1-0-
RFER338969:1:Tyes26920-2690-0---2691146426902690
RLEG216596:2:Tyes20-----------
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