CANDIDATE ID: 54

CANDIDATE ID: 54

NUMBER OF GENES: 13
AVERAGE SCORE:    9.9926204e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    7.6923077e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7843 (yjeS) (b4166)
   Products of gene:
     - G7843-MONOMER (predicted Fe-S electron transport protein)

- G7842 (orn) (b4162)
   Products of gene:
     - G7842-MONOMER (oligoribonuclease monomer)
     - CPLX0-1821 (oligoribonuclease)
       Reactions:
        EC# 3.1.13.3

- G7458 (amiC) (b2817)
   Products of gene:
     - G7458-MONOMER (N-acetylmuramyl-L-alanine amidase)
       Reactions:
        a peptidoglycan + H2O  =  N-acetylmuramate + a peptide

- EG11823 (amiA) (b2435)
   Products of gene:
     - NACMURLALAAMI1-MONOMER (N-acetylmuramoyl-L-alanine amidase 1)
       Reactions:
        a peptidoglycan + H2O  =  N-acetylmuramate + a peptide

- EG11758 (yjeF) (b4167)
   Products of gene:
     - EG11758-MONOMER (predicted carbohydrate kinase)

- EG11757 (yjeE) (b4168)
   Products of gene:
     - EG11757-MONOMER (essential protein with weak ATPase activity)
     - CPLX0-7798 (essential protein with weak ATPase activity)

- EG11363 (amiB) (b4169)
   Products of gene:
     - NACMURLALAAMI2-MONOMER (N-acetylmuramoyl-L-alanine amidase 2)
       Reactions:
        a peptidoglycan + H2O  =  N-acetylmuramate + a peptide

- EG11281 (mutL) (b4170)
   Products of gene:
     - EG11281-MONOMER (MutL)
     - MUTHLS-CPLX (MutHLS complex, methyl-directed mismatch repair)
       Reactions:
        a mismatched DNA base pair  =  a properly matched DNA base pair

- EG10595 (miaA) (b4171)
   Products of gene:
     - EG10595-MONOMER (tRNA(i6A37) synthase)
       Reactions:
        a tRNA + dimethylallyl diphosphate  =  a tRNA containing N6-dimethylallyladenosine + diphosphate
         In pathways
         PWY-2781 (PWY-2781)

- EG10438 (hfq) (b4172)
   Products of gene:
     - EG10438-MONOMER (RNA-binding protein that affects many cellular processes; homolog of mammalian Sm/Sm-like proteins)
     - CPLX0-1461 (HF-I, host factor for RNA phage Q β replication)

- EG10437 (hflX) (b4173)
   Products of gene:
     - EG10437-MONOMER (GTPase associated with the 50S subunit of the ribosome)
       Reactions:
        GTP + H2O  ->  GDP + phosphate + H+

- EG10436 (hflK) (b4174)
   Products of gene:
     - EG10436-MONOMER (regulator of FtsH protease)
     - CPLX0-1321 (HflK-HflC complex; regulator of FtsH protease)
     - CPLX0-2982 (HflB, integral membrane ATP-dependent zinc metallopeptidase)
       Reactions:
        EC# 3.4.24.-

- EG10435 (hflC) (b4175)
   Products of gene:
     - EG10435-MONOMER (regulator of FtsH protease)
     - CPLX0-1321 (HflK-HflC complex; regulator of FtsH protease)
     - CPLX0-2982 (HflB, integral membrane ATP-dependent zinc metallopeptidase)
       Reactions:
        EC# 3.4.24.-



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ORGANISMS CONTAINING AT LEAST 11 GENES FROM THE GROUP:

Total number of orgs: 206
Effective number of orgs (counting one per cluster within 468 clusters): 142

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175813
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295313
YPES386656 ncbi Yersinia pestis Pestoides F13
YPES377628 ncbi Yersinia pestis Nepal51613
YPES360102 ncbi Yersinia pestis Antiqua13
YPES349746 ncbi Yersinia pestis Angola13
YPES214092 ncbi Yersinia pestis CO9213
YPES187410 ncbi Yersinia pestis KIM 1013
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808113
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A13
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 31101813
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC1033113
XFAS405440 ncbi Xylella fastidiosa M1212
XFAS183190 ncbi Xylella fastidiosa Temecula112
XFAS160492 ncbi Xylella fastidiosa 9a5c12
XCAM487884 Xanthomonas campestris pv. paulliniae13
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-1013
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 800413
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 3391313
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 30613
XAUT78245 ncbi Xanthobacter autotrophicus Py211
VVUL216895 ncbi Vibrio vulnificus CMCP613
VVUL196600 ncbi Vibrio vulnificus YJ01613
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 221063313
VFIS312309 ncbi Vibrio fischeri ES11412
VEIS391735 ncbi Verminephrobacter eiseniae EF01-213
VCHO345073 ncbi Vibrio cholerae O39513
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N1696113
TTUR377629 ncbi Teredinibacter turnerae T790113
TDEN292415 ncbi Thiobacillus denitrificans ATCC 2525912
TCRU317025 ncbi Thiomicrospira crunogena XCL-213
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT213
SSP94122 ncbi Shewanella sp. ANA-313
SSP644076 Silicibacter sp. TrichCH4B11
SSP292414 ncbi Ruegeria sp. TM104011
SSON300269 ncbi Shigella sonnei Ss04613
SSED425104 ncbi Shewanella sediminis HAW-EB313
SPRO399741 ncbi Serratia proteamaculans 56813
SPEA398579 ncbi Shewanella pealeana ATCC 70034513
SONE211586 ncbi Shewanella oneidensis MR-113
SMEL266834 ncbi Sinorhizobium meliloti 102112
SMED366394 ncbi Sinorhizobium medicae WSM41912
SLOI323850 ncbi Shewanella loihica PV-413
SLAC55218 Ruegeria lacuscaerulensis11
SHIGELLA ncbi Shigella flexneri 2a str. 2457T13
SHAL458817 ncbi Shewanella halifaxensis HAW-EB413
SGLO343509 ncbi Sodalis glossinidius morsitans11
SFLE373384 ncbi Shigella flexneri 5 str. 840113
SFLE198214 ncbi Shigella flexneri 2a str. 30113
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47613
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6713
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 915013
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1813
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty213
SDYS300267 ncbi Shigella dysenteriae Sd19712
SDEN318161 ncbi Shewanella denitrificans OS21712
SDEG203122 ncbi Saccharophagus degradans 2-4013
SBOY300268 ncbi Shigella boydii Sb22713
SBAL402882 ncbi Shewanella baltica OS18513
SBAL399599 ncbi Shewanella baltica OS19513
SALA317655 ncbi Sphingopyxis alaskensis RB225611
RSOL267608 ncbi Ralstonia solanacearum GMI100013
RRUB269796 ncbi Rhodospirillum rubrum ATCC 1117012
RPAL316058 ncbi Rhodopseudomonas palustris HaA212
RPAL316057 ncbi Rhodopseudomonas palustris BisB512
RPAL316056 ncbi Rhodopseudomonas palustris BisB1812
RPAL316055 ncbi Rhodopseudomonas palustris BisA5312
RPAL258594 ncbi Rhodopseudomonas palustris CGA00912
RMET266264 ncbi Ralstonia metallidurans CH3413
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 384112
RFER338969 ncbi Rhodoferax ferrireducens T11813
REUT381666 ncbi Ralstonia eutropha H1613
REUT264198 ncbi Ralstonia eutropha JMP13413
RETL347834 ncbi Rhizobium etli CFN 4212
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC300013
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a13
PSTU379731 ncbi Pseudomonas stutzeri A150113
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-112
PSP296591 ncbi Polaromonas sp. JS66613
PPUT76869 ncbi Pseudomonas putida GB-113
PPUT351746 ncbi Pseudomonas putida F113
PPUT160488 ncbi Pseudomonas putida KT244013
PPRO298386 ncbi Photobacterium profundum SS913
PNAP365044 ncbi Polaromonas naphthalenivorans CJ213
PMUL272843 ncbi Pasteurella multocida multocida Pm7011
PMEN399739 ncbi Pseudomonas mendocina ymp13
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO112
PING357804 ncbi Psychromonas ingrahamii 3713
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC12512
PFLU220664 ncbi Pseudomonas fluorescens Pf-513
PFLU216595 ncbi Pseudomonas fluorescens SBW2513
PFLU205922 ncbi Pseudomonas fluorescens Pf0-113
PENT384676 ncbi Pseudomonas entomophila L4813
PCAR338963 ncbi Pelobacter carbinolicus DSM 238011
PATL342610 ncbi Pseudoalteromonas atlantica T6c13
PAER208964 ncbi Pseudomonas aeruginosa PAO113
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA1413
OCAR504832 ncbi Oligotropha carboxidovorans OM511
OANT439375 ncbi Ochrobactrum anthropi ATCC 4918812
NWIN323098 ncbi Nitrobacter winogradskyi Nb-25511
NOCE323261 ncbi Nitrosococcus oceani ATCC 1970713
NMUL323848 ncbi Nitrosospira multiformis ATCC 2519613
NHAM323097 ncbi Nitrobacter hamburgensis X1411
NEUT335283 ncbi Nitrosomonas eutropha C9112
NEUR228410 ncbi Nitrosomonas europaea ATCC 1971812
NARO279238 ncbi Novosphingobium aromaticivorans DSM 1244411
MXAN246197 ncbi Myxococcus xanthus DK 162211
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E12
MSP409 Methylobacterium sp.11
MSP400668 ncbi Marinomonas sp. MWYL113
MSP266779 ncbi Chelativorans sp. BNC112
MPET420662 ncbi Methylibium petroleiphilum PM113
MMAR394221 ncbi Maricaulis maris MCS1012
MMAG342108 ncbi Magnetospirillum magneticum AMB-112
MLOT266835 ncbi Mesorhizobium loti MAFF30309912
MFLA265072 ncbi Methylobacillus flagellatus KT13
MEXT419610 ncbi Methylobacterium extorquens PA112
MCAP243233 ncbi Methylococcus capsulatus Bath13
MAQU351348 ncbi Marinobacter aquaeolei VT813
LPNE400673 ncbi Legionella pneumophila Corby12
LPNE297246 ncbi Legionella pneumophila Paris12
LPNE297245 ncbi Legionella pneumophila Lens12
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 112
LCHO395495 ncbi Leptothrix cholodnii SP-613
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857813
JSP375286 ncbi Janthinobacterium sp. Marseille12
JSP290400 ncbi Jannaschia sp. CCS111
ILOI283942 ncbi Idiomarina loihiensis L2TR12
HSOM228400 ncbi Haemophilus somnus 233611
HSOM205914 ncbi Haemophilus somnus 129PT11
HNEP81032 Hyphomonas neptunium12
HHAL349124 ncbi Halorhodospira halophila SL113
HDUC233412 ncbi Haemophilus ducreyi 35000HP11
HCHE349521 ncbi Hahella chejuensis KCTC 239613
HARS204773 ncbi Herminiimonas arsenicoxydans12
ESP42895 Enterobacter sp.13
ELIT314225 ncbi Erythrobacter litoralis HTCC259411
EFER585054 ncbi Escherichia fergusonii ATCC 3546913
ECOO157 ncbi Escherichia coli O157:H7 EDL93313
ECOL83334 Escherichia coli O157:H713
ECOL585397 ncbi Escherichia coli ED1a13
ECOL585057 ncbi Escherichia coli IAI3913
ECOL585056 ncbi Escherichia coli UMN02613
ECOL585055 ncbi Escherichia coli 5598913
ECOL585035 ncbi Escherichia coli S8813
ECOL585034 ncbi Escherichia coli IAI113
ECOL481805 ncbi Escherichia coli ATCC 873913
ECOL469008 ncbi Escherichia coli BL21(DE3)13
ECOL439855 ncbi Escherichia coli SMS-3-513
ECOL413997 ncbi Escherichia coli B str. REL60613
ECOL409438 ncbi Escherichia coli SE1113
ECOL405955 ncbi Escherichia coli APEC O113
ECOL364106 ncbi Escherichia coli UTI8913
ECOL362663 ncbi Escherichia coli 53613
ECOL331111 ncbi Escherichia coli E24377A13
ECOL316407 ncbi Escherichia coli K-12 substr. W311013
ECOL199310 ncbi Escherichia coli CFT07313
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104313
DNOD246195 ncbi Dichelobacter nodosus VCS1703A11
DARO159087 ncbi Dechloromonas aromatica RCB13
CVIO243365 ncbi Chromobacterium violaceum ATCC 1247213
CSP78 Caulobacter sp.12
CSP501479 Citreicella sp. SE4511
CSAL290398 ncbi Chromohalobacter salexigens DSM 304313
CPSY167879 ncbi Colwellia psychrerythraea 34H13
CJAP155077 Cellvibrio japonicus13
BVIE269482 ncbi Burkholderia vietnamiensis G413
BTHA271848 ncbi Burkholderia thailandensis E26413
BSUI470137 ncbi Brucella suis ATCC 2344512
BSUI204722 ncbi Brucella suis 133012
BSP376 Bradyrhizobium sp.12
BSP36773 Burkholderia sp.13
BPSE320373 ncbi Burkholderia pseudomallei 66813
BPSE320372 ncbi Burkholderia pseudomallei 1710b12
BPSE272560 ncbi Burkholderia pseudomallei K9624313
BPET94624 Bordetella petrii12
BPER257313 ncbi Bordetella pertussis Tohama I12
BPAR257311 ncbi Bordetella parapertussis 1282212
BOVI236 Brucella ovis12
BMEL359391 ncbi Brucella melitensis biovar Abortus 230812
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M12
BMAL320389 ncbi Burkholderia mallei NCTC 1024713
BMAL320388 ncbi Burkholderia mallei SAVP113
BMAL243160 ncbi Burkholderia mallei ATCC 2334413
BJAP224911 ncbi Bradyrhizobium japonicum USDA 11012
BCEN331272 ncbi Burkholderia cenocepacia HI242413
BCEN331271 ncbi Burkholderia cenocepacia AU 105412
BCAN483179 ncbi Brucella canis ATCC 2336512
BBRO257310 ncbi Bordetella bronchiseptica RB5012
BAMB398577 ncbi Burkholderia ambifaria MC40-613
BAMB339670 ncbi Burkholderia ambifaria AMMD13
BABO262698 ncbi Brucella abortus bv. 1 str. 9-94112
ASP76114 ncbi Aromatoleum aromaticum EbN113
ASP62928 ncbi Azoarcus sp. BH7213
ASP232721 ncbi Acidovorax sp. JS4212
ASAL382245 ncbi Aeromonas salmonicida salmonicida A44912
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL0311
APLE416269 ncbi Actinobacillus pleuropneumoniae L2011
AHYD196024 Aeromonas hydrophila dhakensis13
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 2327012
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-113
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C11
ACAU438753 ncbi Azorhizobium caulinodans ORS 57111
ABOR393595 ncbi Alcanivorax borkumensis SK213
ABAU360910 ncbi Bordetella avium 197N12
AAVE397945 ncbi Acidovorax citrulli AAC00-113


Names of the homologs of the genes in the group in each of these orgs
  G7843   G7842   G7458   EG11823   EG11758   EG11757   EG11363   EG11281   EG10595   EG10438   EG10437   EG10436   EG10435   
YPSE349747 YPSIP31758_3660YPSIP31758_3661YPSIP31758_0994YPSIP31758_0994YPSIP31758_3658YPSIP31758_3657YPSIP31758_3656YPSIP31758_3655YPSIP31758_3654YPSIP31758_3653YPSIP31758_3652YPSIP31758_3651YPSIP31758_3650
YPSE273123 YPTB0419YPTB0418YPTB3022YPTB3022YPTB0420YPTB0421YPTB0422YPTB0423YPTB0424YPTB0425YPTB0426YPTB0427YPTB0428
YPES386656 YPDSF_3607YPDSF_3608YPDSF_1689YPDSF_1689YPDSF_3606YPDSF_3605YPDSF_3604YPDSF_3603YPDSF_3602YPDSF_3601YPDSF_3600YPDSF_3599YPDSF_3598
YPES377628 YPN_3304YPN_3305YPN_2978YPN_2978YPN_3303YPN_3302YPN_3301YPN_3300YPN_3299YPN_3298YPN_3297YPN_3296YPN_3295
YPES360102 YPA_3917YPA_3918YPA_0495YPA_0495YPA_3916YPA_3915YPA_3914YPA_3913YPA_3912YPA_3911YPA_3910YPA_3909YPA_3908
YPES349746 YPANGOLA_A0705YPANGOLA_A0708YPANGOLA_A3228YPANGOLA_A3228YPANGOLA_A0704YPANGOLA_A0703YPANGOLA_A0702YPANGOLA_A0701YPANGOLA_A0700YPANGOLA_A0699YPANGOLA_A0698YPANGOLA_A0697YPANGOLA_A0696
YPES214092 YPO0367YPO0366YPO1023YPO1023YPO0368YPO0369YPO0370YPO0371YPO0372YPO0373YPO0374YPO0375YPO0376
YPES187410 Y0624Y0623Y3161Y3161Y0625Y0626Y0627Y0628Y0629Y0630Y0632Y0633Y0634
YENT393305 YE0371YE0369YE3307YE3307YE0372YE0373YE0374YE0375YE0376YE0377YE0378YE0379YE0380
XORY360094 XOOORF_1976XOOORF_2465XOOORF_1979XOOORF_1979XOOORF_1977XOOORF_1978XOOORF_1979XOOORF_1980XOOORF_1720XOOORF_1721XOOORF_1722XOOORF_4490XOOORF_4489
XORY342109 XOO2581XOO2077XOO2578XOO2578XOO2580XOO2579XOO2578XOO2577XOO2799XOO2798XOO2797XOO0837XOO0838
XORY291331 XOO2736XOO2209XOO2733XOO2733XOO2735XOO2734XOO2733XOO2732XOO2947XOO2946XOO2945XOO0912XOO0913
XFAS405440 XFASM12_0591XFASM12_2082XFASM12_2082XFASM12_2084XFASM12_2083XFASM12_2082XFASM12_2081XFASM12_0071XFASM12_0070XFASM12_0069XFASM12_1787XFASM12_1786
XFAS183190 PD_0522PD_1898PD_1898PD_1900PD_1899PD_1898PD_1897PD_0067PD_0066PD_0065PD_1630PD_1629
XFAS160492 XF1257XF0759XF0759XF0757XF0758XF0759XF0760XF0090XF0089XF0088XF0452XF0453
XCAM487884 XCC-B100_1876XCC-B100_2013XCC-B100_1879XCC-B100_1879XCC-B100_1877XCC-B100_1878XCC-B100_1879XCC-B100_1880XCC-B100_2544XCC-B100_2543XCC-B100_2542XCC-B100_3294XCC-B100_3293
XCAM316273 XCAORF_2574XCAORF_2437XCAORF_2571XCAORF_2571XCAORF_2573XCAORF_2572XCAORF_2571XCAORF_2570XCAORF_1951XCAORF_1952XCAORF_1953XCAORF_1254XCAORF_1255
XCAM314565 XC_1813XC_1950XC_1816XC_1816XC_1814XC_1815XC_1816XC_1817XC_2516XC_2515XC_2514XC_3196XC_3195
XCAM190485 XCC2302XCC2168XCC2299XCC2299XCC2301XCC2300XCC2299XCC2298XCC1715XCC1716XCC1717XCC1050XCC1051
XAXO190486 XAC2409XAC2039XAC2406XAC2406XAC2408XAC2407XAC2406XAC2405XAC1734XAC1735XAC1736XAC1155XAC1156
XAUT78245 XAUT_1809XAUT_4667XAUT_4667XAUT_3587XAUT_4667XAUT_3054XAUT_1659XAUT_4393XAUT_4392XAUT_1664XAUT_3385
VVUL216895 VV1_1289VV1_1286VV1_1291VV1_1291VV2_0714VV1_1290VV1_1291VV1_1292VV1_1293VV1_1294VV1_1295VV1_1296VV1_1297
VVUL196600 VV3076VV3078VV3074VV3074VVA1183VV3075VV3074VV3073VV3072VV3071VV3070VV3069VV3068
VPAR223926 VP2822VP2823VP2820VP2820VPA1160VP2821VP2820VP2819VP2818VP2817VP2816VP2815VP2814
VFIS312309 VF2328VF2329VF2326VF2326VF2327VF2326VF2325VF2324VF2323VF2322VF2321VF2320
VEIS391735 VEIS_1713VEIS_0324VEIS_1711VEIS_1711VEIS_1426VEIS_1712VEIS_1711VEIS_4225VEIS_4227VEIS_0075VEIS_0074VEIS_0073VEIS_0072
VCHO345073 VC0395_A2753VC0395_A2743VC0395_A2755VC0395_A2755VC0395_1084VC0395_A2754VC0395_A2755VC0395_A2756VC0395_A2757VC0395_A2758VC0395_A2759VC0395_A2760VC0395_A2761
VCHO VC0342VC0341VC0344VC0344VCA0191VC0343VC0344VC0345VC0346VC0347VC0348VC0349VC0350
TTUR377629 TERTU_3564TERTU_3568TERTU_3561TERTU_3561TERTU_3563TERTU_3562TERTU_3561TERTU_3560TERTU_3559TERTU_3558TERTU_3557TERTU_3556TERTU_3554
TDEN292415 TBD_1520TBD_1839TBD_1519TBD_1519TBD_0626TBD_1519TBD_1517TBD_1512TBD_1533TBD_0602TBD_0603TBD_0604
TCRU317025 TCR_1081TCR_0633TCR_1083TCR_1083TCR_1817TCR_1082TCR_1083TCR_1084TCR_1085TCR_1086TCR_1087TCR_1090TCR_1091
STYP99287 STM4355STM4350STM2991STM2450STM4356STM4357STM4358STM4359STM4360STM4361STM4362STM4363STM4364
SSP94122 SHEWANA3_0745SHEWANA3_0590SHEWANA3_0594SHEWANA3_0594SHEWANA3_0592SHEWANA3_0593SHEWANA3_0594SHEWANA3_0595SHEWANA3_0596SHEWANA3_0597SHEWANA3_0598SHEWANA3_0599SHEWANA3_0600
SSP644076 SCH4B_3032SCH4B_4242SCH4B_4242SCH4B_4490SCH4B_3165SCH4B_4242SCH4B_3482SCH4B_2287SCH4B_2288SCH4B_1779SCH4B_1780
SSP292414 TM1040_2806TM1040_0866TM1040_0866TM1040_1024TM1040_2842TM1040_0866TM1040_0102TM1040_1356TM1040_1355TM1040_1956TM1040_1955
SSON300269 SSO_4352SSO_4347SSO_2974SSO_2524SSO_4351SSO_4353SSO_4354SSO_4355SSO_4356SSO_4357SSO_4358SSO_4359SSO_4360
SSED425104 SSED_3526SSED_0790SSED_0794SSED_0794SSED_0792SSED_0793SSED_0794SSED_0795SSED_0796SSED_0797SSED_0798SSED_0799SSED_0800
SPRO399741 SPRO_0425SPRO_0424SPRO_3811SPRO_3463SPRO_0426SPRO_0427SPRO_0428SPRO_0429SPRO_0430SPRO_0431SPRO_0432SPRO_0433SPRO_0434
SPEA398579 SPEA_3194SPEA_3547SPEA_3543SPEA_3543SPEA_3545SPEA_3544SPEA_3543SPEA_3542SPEA_3541SPEA_3540SPEA_3539SPEA_3538SPEA_3537
SONE211586 SO_3861SO_0592SO_0600SO_0600SO_0598SO_0599SO_0600SO_0601SO_0602SO_0603SO_0604SO_0605SO_0606
SMEL266834 SMC00406SMC01335SMC01335SMC00946SMC02757SMC01335SMC00932SMC01435SMC01048SMC01049SMC01441SMC01440
SMED366394 SMED_3534SMED_0959SMED_0959SMED_1387SMED_3245SMED_0959SMED_0428SMED_2011SMED_1095SMED_1096SMED_2018SMED_2017
SLOI323850 SHEW_2979SHEW_0559SHEW_0563SHEW_0563SHEW_0561SHEW_0562SHEW_0563SHEW_0564SHEW_0565SHEW_0566SHEW_0567SHEW_0568SHEW_0569
SLAC55218 SL1157_1028SL1157_2544SL1157_2544SL1157_2473SL1157_1063SL1157_2544SL1157_1337SL1157_2690SL1157_2691SL1157_2344SL1157_2345
SHIGELLA YJESYJERS3025AMIAYJEFYJEEAMIBMUTLMIAAHFQHFLXHFLKHFLC
SHAL458817 SHAL_3275SHAL_3641SHAL_3637SHAL_3637SHAL_3639SHAL_3638SHAL_3637SHAL_3636SHAL_3635SHAL_3634SHAL_3633SHAL_3632SHAL_3631
SGLO343509 SG0314SG1961SG1961SG0333SG0334SG0335SG0336SG0337SG0338SG0339SG0340
SFLE373384 SFV_4325SFV_4319SFV_2895SFV_2487SFV_4324SFV_4326SFV_4327SFV_4328SFV_4329SFV_4330SFV_4331SFV_4332SFV_4333
SFLE198214 AAN45738.1AAN45737.1AAN44315.1AAN43993.1AAN45739.1AAN45740.1AAN45741.1AAN45742.1AAN45743.1AAN45744.1AAN45745.1AAN45746.1AAN45747.1
SENT454169 SEHA_C4774SEHA_C4768SEHA_C3203SEHA_C2710SEHA_C4773SEHA_C4775SEHA_C4776SEHA_C4777SEHA_C4778SEHA_C4779SEHA_C4780SEHA_C4781SEHA_C4782
SENT321314 SCH_4231SCH_4229SCH_2929SCH_2449SCH_4232SCH_4233SCH_4234SCH_4235SCH_4236SCH_4237SCH_4238SCH_4239SCH_4240
SENT295319 SPA4172SPA4167SPA2856SPA0416SPA4173SPA4174SPA4175SPA4176SPA4177SPA4178SPA4179SPA4180SPA4181
SENT220341 STY4712STY4710STY3129STY2687STY4713STY4714STY4715STY4716STY4717STY4718STY4719STY4720STY4721
SENT209261 T4407T4402T2899T0408T4406T4408T4409T4410T4411T4412T4413T4414T4415
SDYS300267 SDY_4425SDY_4430SDY_3034SDY_2633SDY_4421SDY_4420SDY_4419SDY_4418SDY_4417SDY_4416SDY_4415SDY_4414
SDEN318161 SDEN_0733SDEN_3212SDEN_3208SDEN_3208SDEN_3209SDEN_3208SDEN_3207SDEN_3206SDEN_3205SDEN_3204SDEN_3203SDEN_3202
SDEG203122 SDE_2673SDE_2676SDE_2670SDE_2670SDE_2672SDE_2671SDE_2670SDE_2669SDE_2668SDE_2667SDE_2666SDE_2665SDE_2664
SBOY300268 SBO_4289SBO_4295SBO_2707SBO_2460SBO_4290SBO_4288SBO_4287SBO_4286SBO_4285SBO_4284SBO_4283SBO_4282SBO_4281
SBAL402882 SHEW185_3639SHEW185_3774SHEW185_3770SHEW185_3770SHEW185_3772SHEW185_3771SHEW185_3770SHEW185_3769SHEW185_3768SHEW185_3767SHEW185_3766SHEW185_3765SHEW185_3764
SBAL399599 SBAL195_3762SBAL195_3900SBAL195_3896SBAL195_3896SBAL195_3898SBAL195_3897SBAL195_3896SBAL195_3895SBAL195_3894SBAL195_3893SBAL195_3892SBAL195_3891SBAL195_3890
SALA317655 SALA_2868SALA_3173SALA_3173SALA_1191SALA_0161SALA_3173SALA_1626SALA_1469SALA_1272SALA_2249SALA_2248
RSOL267608 RSC2541RSC0942RSC2539RSC2539RSC1720RSC2540RSC2539RSC2563RSC2564RSC1220RSC1221RSC1222RSC1223
RRUB269796 RRU_A0279RRU_A2148RRU_A2148RRU_A1547RRU_A3438RRU_A2148RRU_A2946RRU_A0466RRU_A1684RRU_A1685RRU_A2203RRU_A2202
RPAL316058 RPB_0663RPB_3008RPB_3008RPB_2560RPB_0625RPB_3008RPB_4176RPB_3346RPB_2878RPB_2877RPB_2038RPB_2039
RPAL316057 RPD_0170RPD_2443RPD_2443RPD_2899RPD_0206RPD_2443RPD_4032RPD_2097RPD_2594RPD_2595RPD_3352RPD_3351
RPAL316056 RPC_0440RPC_2853RPC_2853RPC_2388RPC_0383RPC_2853RPC_1389RPC_3256RPC_2582RPC_2583RPC_3262RPC_3261
RPAL316055 RPE_0502RPE_2978RPE_2978RPE_2507RPE_0464RPE_2978RPE_1420RPE_2186RPE_2762RPE_2763RPE_2178RPE_2179
RPAL258594 RPA0042RPA2451RPA2451RPA2965RPA0078RPA2451RPA4371RPA2030RPA2597RPA2598RPA3491RPA3490
RMET266264 RMET_0524RMET_2574RMET_0526RMET_0526RMET_1878RMET_0525RMET_0526RMET_2908RMET_2909RMET_2101RMET_2100RMET_2099RMET_2098
RLEG216596 RL0326RL1742RL1742RL2394RL0029RL1742RL0910RL3249RL2284RL2285RL3254RL3253
RFER338969 RFER_3301RFER_1412RFER_3303RFER_3303RFER_1984RFER_3302RFER_3303RFER_3308RFER_1535RFER_2302RFER_2301RFER_2300RFER_2299
REUT381666 H16_A0595H16_A2709H16_A0597H16_A0597H16_A1504H16_A0596H16_A0597H16_A3069H16_A3070H16_A2359H16_A2358H16_A2357H16_A2356
REUT264198 REUT_A0582REUT_A0907REUT_A0584REUT_A0584REUT_A1387REUT_A0583REUT_A0584REUT_A2769REUT_A2770REUT_A2081REUT_A2080REUT_A2079REUT_A2078
RETL347834 RHE_CH00308RHE_CH01646RHE_CH01646RHE_CH02104RHE_CH00029RHE_CH01646RHE_CH00848RHE_CH02793RHE_CH01954RHE_CH01955RHE_CH02797RHE_CH02796
PSYR223283 PSPTO_4948PSPTO_4950PSPTO_4945PSPTO_4945PSPTO_4947PSPTO_4946PSPTO_4945PSPTO_4944PSPTO_4943PSPTO_4942PSPTO_4941PSPTO_4940PSPTO_4939
PSYR205918 PSYR_0566PSYR_0564PSYR_0569PSYR_0569PSYR_0567PSYR_0568PSYR_0569PSYR_0570PSYR_0571PSYR_0572PSYR_0573PSYR_0574PSYR_0575
PSTU379731 PST_3674PST_3793PST_3671PST_3671PST_3673PST_3672PST_3671PST_3670PST_3669PST_3668PST_3667PST_3666PST_3665
PSP312153 PNUC_0597PNUC_0525PNUC_0595PNUC_0595PNUC_1363PNUC_0596PNUC_0595PNUC_1760PNUC_1286PNUC_1285PNUC_1284PNUC_1283
PSP296591 BPRO_3197BPRO_1700BPRO_3199BPRO_3199BPRO_2698BPRO_3198BPRO_3199BPRO_3209BPRO_3212BPRO_2603BPRO_2602BPRO_2601BPRO_2600
PPUT76869 PPUTGB1_4952PPUTGB1_4954PPUTGB1_4949PPUTGB1_4949PPUTGB1_4951PPUTGB1_4950PPUTGB1_4949PPUTGB1_4948PPUTGB1_4947PPUTGB1_4946PPUTGB1_4945PPUTGB1_4944PPUTGB1_4943
PPUT351746 PPUT_4776PPUT_4778PPUT_4773PPUT_4773PPUT_4775PPUT_4774PPUT_4773PPUT_4772PPUT_4771PPUT_4770PPUT_4769PPUT_4768PPUT_4767
PPUT160488 PP_4900PP_4902PP_4897PP_4897PP_4899PP_4898PP_4897PP_4896PP_4895PP_4894PP_4893PP_4892PP_4891
PPRO298386 PBPRA3356PBPRA3370PBPRA3353PBPRA3353PBPRA3355PBPRA3354PBPRA3353PBPRA3352PBPRA3351PBPRA3350PBPRA3349PBPRA3348PBPRA3347
PNAP365044 PNAP_1172PNAP_1470PNAP_1170PNAP_1170PNAP_2436PNAP_1171PNAP_1170PNAP_1157PNAP_1155PNAP_1877PNAP_1878PNAP_1879PNAP_1880
PMUL272843 PM0900PM0903PM0903PM0902PM0903PM0904PM0905PM0906PM0907PM0117PM0118
PMEN399739 PMEN_0629PMEN_0628PMEN_0632PMEN_0632PMEN_0630PMEN_0631PMEN_0632PMEN_0633PMEN_0634PMEN_0635PMEN_0636PMEN_0637PMEN_0638
PLUM243265 PLU4586PLU4595PLU0645PLU0645PLU4585PLU4584PLU4583PLU4582PLU4581PLU4580PLU4579PLU4578
PING357804 PING_3244PING_3335PING_3241PING_3241PING_3243PING_3242PING_3241PING_3240PING_3239PING_3238PING_3237PING_3236PING_3235
PHAL326442 PSHAA2485PSHAA0488PSHAA0268PSHAA0268PSHAA0267PSHAA0268PSHAA0269PSHAA0270PSHAA0271PSHAA0272PSHAA0273PSHAA0274
PFLU220664 PFL_0560PFL_0558PFL_0563PFL_0563PFL_0561PFL_0562PFL_0563PFL_0564PFL_0565PFL_0566PFL_0567PFL_0568PFL_0569
PFLU216595 PFLU0514PFLU0512PFLU0517PFLU6087PFLU0515PFLU0516PFLU0517PFLU0518PFLU0519PFLU0520PFLU0521PFLU0522PFLU0523
PFLU205922 PFL_0517PFL_0515PFL_0520PFL_0520PFL_0518PFL_0519PFL_0520PFL_0521PFL_0522PFL_0523PFL_0524PFL_0525PFL_0526
PENT384676 PSEEN4949PSEEN4954PSEEN4946PSEEN4946PSEEN4948PSEEN4947PSEEN4946PSEEN4945PSEEN4944PSEEN4943PSEEN4942PSEEN4941PSEEN4940
PCAR338963 PCAR_1511PCAR_1511PCAR_0561PCAR_1005PCAR_1511PCAR_1304PCAR_1305PCAR_1306PCAR_2043PCAR_2262PCAR_2263
PATL342610 PATL_3972PATL_3481PATL_3975PATL_3975PATL_3973PATL_3974PATL_3975PATL_3976PATL_3977PATL_3978PATL_3979PATL_3980PATL_3981
PAER208964 PA4950PA4951PA4947PA4947PA4949PA4948PA4947PA4946PA4945PA4944PA4943PA4942PA4941
PAER208963 PA14_65400PA14_65410PA14_65370PA14_65370PA14_65390PA14_65380PA14_65370PA14_65350PA14_65320PA14_65310PA14_65300PA14_65280PA14_65270
OCAR504832 OCAR_5986OCAR_5986OCAR_5904OCAR_4486OCAR_5986OCAR_7241OCAR_5283OCAR_6100OCAR_6101OCAR_5278OCAR_5279
OANT439375 OANT_1337OANT_2267OANT_2267OANT_2089OANT_0820OANT_2267OANT_3049OANT_1801OANT_2208OANT_2207OANT_1794OANT_1795
NWIN323098 NWI_1719NWI_1719NWI_1902NWI_0046NWI_1719NWI_2548NWI_2344NWI_1449NWI_1450NWI_2349NWI_2348
NOCE323261 NOC_0340NOC_0341NOC_0337NOC_0337NOC_0339NOC_0338NOC_0337NOC_0336NOC_2591NOC_2590NOC_2589NOC_2588NOC_2587
NMUL323848 NMUL_A2530NMUL_A0714NMUL_A2532NMUL_A2532NMUL_A2384NMUL_A2531NMUL_A2532NMUL_A1144NMUL_A0092NMUL_A0447NMUL_A0446NMUL_A0445NMUL_A0444
NHAM323097 NHAM_1823NHAM_1823NHAM_2232NHAM_0054NHAM_1823NHAM_3169NHAM_2723NHAM_1841NHAM_1842NHAM_2728NHAM_2727
NEUT335283 NEUT_2290NEUT_1896NEUT_1896NEUT_0145NEUT_1895NEUT_1896NEUT_1828NEUT_0386NEUT_0961NEUT_0962NEUT_0963NEUT_0964
NEUR228410 NE0075NE0656NE0656NE0020NE0657NE0656NE1742NE1976NE1287NE1286NE1285NE1284
NARO279238 SARO_0217SARO_2317SARO_2317SARO_0182SARO_2001SARO_2317SARO_2127SARO_1931SARO_1932SARO_3333SARO_3332
MXAN246197 MXAN_5940MXAN_7151MXAN_3886MXAN_3886MXAN_4349MXAN_3886MXAN_4026MXAN_3731MXAN_1356MXAN_3171MXAN_3172
MSUC221988 MS1512MS1515MS1515MS1211MS1514MS1515MS1516MS1517MS1518MS1519MS1619MS1620
MSP409 M446_5842M446_5842M446_6586M446_0493M446_5842M446_6625M446_6189M446_5942M446_5943M446_1089M446_1088
MSP400668 MMWYL1_1317MMWYL1_2638MMWYL1_2635MMWYL1_2635MMWYL1_3063MMWYL1_2636MMWYL1_2635MMWYL1_2634MMWYL1_2633MMWYL1_2632MMWYL1_2631MMWYL1_2630MMWYL1_2629
MSP266779 MESO_3598MESO_1709MESO_1709MESO_1546MESO_3578MESO_1709MESO_0441MESO_1743MESO_1613MESO_1612MESO_1749MESO_1748
MPET420662 MPE_A2025MPE_A2911MPE_A2027MPE_A2027MPE_A1982MPE_A2026MPE_A2027MPE_A2031MPE_A2034MPE_A1991MPE_A1990MPE_A1989MPE_A1988
MMAR394221 MMAR10_0118MMAR10_1297MMAR10_1297MMAR10_1332MMAR10_0082MMAR10_1297MMAR10_0616MMAR10_2021MMAR10_1448MMAR10_1449MMAR10_2024MMAR10_2023
MMAG342108 AMB0780AMB3238AMB3238AMB2798AMB4249AMB3238AMB4416AMB3506AMB2372AMB2373AMB3489AMB3490
MLOT266835 MLR4636MLR0213MLR0213MLR0346MLL5086MLR0213MLL8278MLL1448MLR0402MLR0403MLL1455MLL1454
MFLA265072 MFLA_1379MFLA_1473MFLA_1381MFLA_1381MFLA_1912MFLA_1380MFLA_1381MFLA_1384MFLA_1385MFLA_1589MFLA_1588MFLA_1587MFLA_1586
MEXT419610 MEXT_2385MEXT_3661MEXT_3661MEXT_2373MEXT_4431MEXT_3661MEXT_4265MEXT_2654MEXT_2824MEXT_2825MEXT_2658MEXT_2657
MCAP243233 MCA_1302MCA_0539MCA_1296MCA_1296MCA_1301MCA_1300MCA_1296MCA_1692MCA_1691MCA_1983MCA_1982MCA_1981MCA_1980
MAQU351348 MAQU_2775MAQU_2776MAQU_2772MAQU_2772MAQU_2774MAQU_2773MAQU_2772MAQU_2771MAQU_2770MAQU_2769MAQU_2768MAQU_2767MAQU_2766
LPNE400673 LPC_0389LPC_0437LPC_0437LPC_0435LPC_0436LPC_0437LPC_0438LPC_0439LPC_0010LPC_0011LPC_2860LPC_2859
LPNE297246 LPP2797LPP2753LPP2753LPP2755LPP2754LPP2753LPP2752LPP2751LPP0009LPP0010LPP0548LPP0549
LPNE297245 LPL2666LPL2626LPL2626LPL2628LPL2627LPL2626LPL2625LPL2624LPL0009LPL0010LPL0524LPL0525
LPNE272624 LPG2741LPG2698LPG2698LPG2700LPG2699LPG2698LPG2697LPG2696LPG0009LPG0010LPG0484LPG0485
LCHO395495 LCHO_1131LCHO_0985LCHO_1129LCHO_1129LCHO_2854LCHO_1130LCHO_1129LCHO_1125LCHO_1285LCHO_2863LCHO_2862LCHO_2861LCHO_2860
KPNE272620 GKPORF_B3922GKPORF_B3917GKPORF_B2566GKPORF_B2097GKPORF_B3923GKPORF_B3924GKPORF_B3925GKPORF_B3926GKPORF_B3927GKPORF_B3928GKPORF_B3929GKPORF_B3930GKPORF_B3931
JSP375286 MMA_0852MMA_0464MMA_0464MMA_1539MMA_0465MMA_0464MMA_0462MMA_0461MMA_2122MMA_2121MMA_2120MMA_2119
JSP290400 JANN_0274JANN_2536JANN_2536JANN_1517JANN_4062JANN_2536JANN_4047JANN_2244JANN_2245JANN_3173JANN_3172
ILOI283942 IL2300IL0330IL0330IL0328IL0329IL0330IL0331IL0332IL0333IL0334IL0335IL0336
HSOM228400 HSM_1007HSM_1567HSM_1567HSM_1566HSM_1567HSM_1568HSM_1569HSM_1074HSM_1075HSM_1785HSM_1784
HSOM205914 HS_1100HS_1082HS_1082HS_1081HS_1082HS_1083HS_1084HS_1105HS_1104HS_0487HS_0488
HNEP81032 HNE_3103HNE_0674HNE_0674HNE_2080HNE_1887HNE_0674HNE_0913HNE_0452HNE_2006HNE_2005HNE_0469HNE_0470
HHAL349124 HHAL_0672HHAL_0225HHAL_0669HHAL_0669HHAL_0671HHAL_0670HHAL_0669HHAL_0668HHAL_0667HHAL_0666HHAL_0665HHAL_0664HHAL_0663
HDUC233412 HD_0452HD_0450HD_0450HD_0451HD_0450HD_0743HD_0742HD_0741HD_0740HD_1809HD_1808
HCHE349521 HCH_05391HCH_05390HCH_05387HCH_05387HCH_05389HCH_05388HCH_05387HCH_05385HCH_05384HCH_05383HCH_05382HCH_05381HCH_05380
HARS204773 HEAR0876HEAR0408HEAR0408HEAR1745HEAR0409HEAR0408HEAR0406HEAR0405HEAR1269HEAR1271HEAR1272HEAR1273
ESP42895 ENT638_0349ENT638_0348ENT638_3260ENT638_2956ENT638_0350ENT638_0351ENT638_0352ENT638_0353ENT638_0354ENT638_0355ENT638_0356ENT638_0357ENT638_0358
ELIT314225 ELI_12430ELI_06765ELI_06765ELI_05050ELI_06765ELI_05795ELI_05520ELI_06260ELI_06255ELI_11330ELI_11335
EFER585054 EFER_4219EFER_4216EFER_0253EFER_0737EFER_4220EFER_4221EFER_4222EFER_4223EFER_4224EFER_4225EFER_4226EFER_4227EFER_4228
ECOO157 YJESYJERZ4134AMIAYJEFYJEEAMIBMUTLMIAAHFQHFLXHFLKHFLC
ECOL83334 ECS5143ECS5141ECS3674ECS3306ECS5142ECS5144ECS5145ECS5146ECS5147ECS5148ECS5149ECS5150ECS5151
ECOL585397 ECED1_4951ECED1_4949ECED1_3273ECED1_2877ECED1_4952ECED1_4953ECED1_4954ECED1_4955ECED1_4956ECED1_4957ECED1_4958ECED1_4959ECED1_4960
ECOL585057 ECIAI39_4630ECIAI39_4627ECIAI39_3236ECIAI39_2580ECIAI39_4631ECIAI39_4632ECIAI39_4633ECIAI39_4634ECIAI39_4636ECIAI39_4637ECIAI39_4638ECIAI39_4639ECIAI39_4640
ECOL585056 ECUMN_4699ECUMN_4696ECUMN_3144ECUMN_2756ECUMN_4700ECUMN_4701ECUMN_4702ECUMN_4703ECUMN_4704ECUMN_4705ECUMN_4706ECUMN_4707ECUMN_4708
ECOL585055 EC55989_4721EC55989_4719EC55989_3093EC55989_2724EC55989_4722EC55989_4723EC55989_4724EC55989_4725EC55989_4726EC55989_4727EC55989_4728EC55989_4729EC55989_4730
ECOL585035 ECS88_4752ECS88_4750ECS88_3112ECS88_2623ECS88_4753ECS88_4754ECS88_4755ECS88_4756ECS88_4757ECS88_4758ECS88_4759ECS88_4760ECS88_4761
ECOL585034 ECIAI1_4399ECIAI1_4397ECIAI1_2925ECIAI1_2492ECIAI1_4400ECIAI1_4401ECIAI1_4402ECIAI1_4403ECIAI1_4404ECIAI1_4405ECIAI1_4406ECIAI1_4407ECIAI1_4408
ECOL481805 ECOLC_3847ECOLC_3848ECOLC_0898ECOLC_1244ECOLC_3846ECOLC_3845ECOLC_3844ECOLC_3843ECOLC_3842ECOLC_3841ECOLC_3840ECOLC_3839ECOLC_3838
ECOL469008 ECBD_3868ECBD_3869ECBD_0908ECBD_1247ECBD_3867ECBD_3866ECBD_3865ECBD_3864ECBD_3863ECBD_3862ECBD_3861ECBD_3860ECBD_3859
ECOL439855 ECSMS35_4637ECSMS35_4633ECSMS35_3140ECSMS35_2590ECSMS35_4638ECSMS35_4639ECSMS35_4640ECSMS35_4641ECSMS35_4642ECSMS35_4643ECSMS35_4644ECSMS35_4645ECSMS35_4646
ECOL413997 ECB_04033ECB_04032ECB_02665ECB_02335ECB_04034ECB_04035ECB_04036ECB_04037ECB_04038ECB_04039ECB_04040ECB_04041ECB_04042
ECOL409438 ECSE_4464ECSE_4462ECSE_3074ECSE_2725ECSE_4463ECSE_4465ECSE_4466ECSE_4467ECSE_4468ECSE_4469ECSE_4470ECSE_4471ECSE_4472
ECOL405955 APECO1_2225APECO1_2227APECO1_3688APECO1_4113APECO1_2224APECO1_2223APECO1_2222APECO1_2221APECO1_2220APECO1_2219APECO1_2218APECO1_2217APECO1_2216
ECOL364106 UTI89_C4766UTI89_C4762UTI89_C3218UTI89_C2768UTI89_C4767UTI89_C4768UTI89_C4769UTI89_C4770UTI89_C4771UTI89_C4772UTI89_C4773UTI89_C4774UTI89_C4775
ECOL362663 ECP_4411ECP_4406ECP_2829ECP_2456ECP_4412ECP_4413ECP_4414ECP_4415ECP_4416ECP_4417ECP_4418ECP_4419ECP_4420
ECOL331111 ECE24377A_4723ECE24377A_4719ECE24377A_3137ECE24377A_2721ECE24377A_4724ECE24377A_4725ECE24377A_4727ECE24377A_4728ECE24377A_4729ECE24377A_4730ECE24377A_4731ECE24377A_4732ECE24377A_4733
ECOL316407 ECK4162:JW4124:B4166ECK4158:JW5740:B4162ECK2813:JW5449:B2817ECK2430:JW2428:B2435ECK4163:JW4125:B4167ECK4164:JW4126:B4168ECK4165:JW4127:B4169ECK4166:JW4128:B4170ECK4167:JW4129:B4171ECK4168:JW4130:B4172ECK4169:JW4131:B4173ECK4170:JW4132:B4174ECK4171:JW4133:B4175
ECOL199310 C5250C5249C3411C2969C5251C5252C5253C5254C5255C5256C5257C5258C5259
ECAR218491 ECA3940ECA3964ECA1000ECA1000ECA3939ECA3938ECA3937ECA3936ECA3935ECA3934ECA3933ECA3932ECA3931
DNOD246195 DNO_0904DNO_0311DNO_0311DNO_0149DNO_0311DNO_1116DNO_1117DNO_0595DNO_0596DNO_0597DNO_0598
DARO159087 DARO_3051DARO_3001DARO_3049DARO_3049DARO_2379DARO_3050DARO_3049DARO_3164DARO_3171DARO_2980DARO_2979DARO_2978DARO_2977
CVIO243365 CV_3820CV_2368CV_3822CV_3822CV_3338CV_3821CV_3822CV_1342CV_3389CV_3533CV_3532CV_3531CV_3530
CSP78 CAUL_4944CAUL_2573CAUL_2573CAUL_2850CAUL_4849CAUL_2573CAUL_4062CAUL_3349CAUL_2610CAUL_2611CAUL_3344CAUL_3345
CSP501479 CSE45_2946CSE45_2376CSE45_2376CSE45_1907CSE45_3370CSE45_2376CSE45_3238CSE45_1387CSE45_1388CSE45_1025CSE45_1026
CSAL290398 CSAL_1271CSAL_1270CSAL_1274CSAL_1274CSAL_1272CSAL_1273CSAL_1274CSAL_1275CSAL_1276CSAL_1277CSAL_1278CSAL_1279CSAL_1280
CPSY167879 CPS_0319CPS_4379CPS_0322CPS_0322CPS_0320CPS_0321CPS_0322CPS_0323CPS_0324CPS_0325CPS_0326CPS_0327CPS_0328
CJAP155077 CJA_3093CJA_3117CJA_3082CJA_3082CJA_3087CJA_3086CJA_3082CJA_3081CJA_3080CJA_3079CJA_3078CJA_3077CJA_3076
BVIE269482 BCEP1808_2654BCEP1808_0998BCEP1808_2656BCEP1808_2656BCEP1808_1848BCEP1808_2655BCEP1808_2656BCEP1808_0724BCEP1808_0723BCEP1808_1734BCEP1808_1733BCEP1808_1732BCEP1808_1731
BTHA271848 BTH_I0724BTH_I1670BTH_I0722BTH_I0722BTH_I2133BTH_I0723BTH_I0722BTH_I1320BTH_I1319BTH_I2239BTH_I2240BTH_I2241BTH_I2242
BSUI470137 BSUIS_B1040BSUIS_A0955BSUIS_A0955BSUIS_A1049BSUIS_A1941BSUIS_A0955BSUIS_B0222BSUIS_A1441BSUIS_A1160BSUIS_A1159BSUIS_A1448BSUIS_A1447
BSUI204722 BR_A1045BR_0915BR_0915BR_1006BR_2100BR_0915BR_A0218BR_1390BR_1111BR_1110BR_1397BR_1396
BSP376 BRADO0131BRADO3513BRADO3513BRADO4203BRADO0080BRADO3513BRADO6079BRADO5567BRADO3855BRADO3854BRADO5575BRADO5574
BSP36773 BCEP18194_A5893BCEP18194_A4192BCEP18194_A5895BCEP18194_A5895BCEP18194_A5217BCEP18194_A5894BCEP18194_A5895BCEP18194_A3853BCEP18194_A3852BCEP18194_A5108BCEP18194_A5107BCEP18194_A5106BCEP18194_A5105
BPSE320373 BURPS668_0909BURPS668_2848BURPS668_0907BURPS668_0907BURPS668_2307BURPS668_0908BURPS668_0907BURPS668_3264BURPS668_3265BURPS668_2184BURPS668_2183BURPS668_2182BURPS668_2181
BPSE320372 BURPS1710B_A1124BURPS1710B_A3207BURPS1710B_A1122BURPS1710B_A1122BURPS1710B_A1123BURPS1710B_A1122BURPS1710B_A3583BURPS1710B_A3584BURPS1710B_A2551BURPS1710B_A2550BURPS1710B_A2549BURPS1710B_A2548
BPSE272560 BPSL0861BPSL2481BPSL0859BPSL0859BPSL1414BPSL0860BPSL0859BPSL2814BPSL2815BPSL1518BPSL1519BPSL1520BPSL1521
BPET94624 BPET1921BPET0830BPET0830BPET0361BPET0831BPET0830BPET0827BPET0826BPET2025BPET2026BPET2027BPET2028
BPER257313 BP2687BP0246BP0246BP3303BP0247BP0246BP0244BP0243BP2193BP2192BP2191BP2190
BPAR257311 BPP1670BPP3621BPP3621BPP4120BPP3620BPP3621BPP3623BPP3624BPP2849BPP2848BPP2847BPP2846
BOVI236 GBOORFA1076GBOORF0941GBOORF0941GBOORF1003GBOORF2094GBOORF0941GBOORFA0215GBOORF1404GBOORF1112GBOORF1111GBOORF1410GBOORF1409
BMEL359391 BAB2_1006BAB1_0931BAB1_0931BAB1_1025BAB1_2102BAB1_0931BAB2_0212BAB1_1409BAB1_1134BAB1_1133BAB1_1416BAB1_1415
BMEL224914 BMEII0255BMEI1056BMEI1056BMEI0977BMEI2026BMEI1056BMEII1026BMEI0616BMEI0872BMEI0873BMEI0610BMEI0611
BMAL320389 BMA10247_0116BMA10247_0239BMA10247_0114BMA10247_0114BMA10247_1214BMA10247_0115BMA10247_0114BMA10247_2192BMA10247_2193BMA10247_1101BMA10247_1100BMA10247_1099BMA10247_1098
BMAL320388 BMASAVP1_A0667BMASAVP1_A2535BMASAVP1_A0665BMASAVP1_A0665BMASAVP1_A1941BMASAVP1_A0666BMASAVP1_A0665BMASAVP1_A0514BMASAVP1_A0513BMASAVP1_A1829BMASAVP1_A1828BMASAVP1_A1827BMASAVP1_A1826
BMAL243160 BMA_0367BMA_0392BMA_0365BMA_0365BMA_1448BMA_0366BMA_0365BMA_2314BMA_2315BMA_1340BMA_1339BMA_1338BMA_1337
BJAP224911 BLL0714BLR4306BLR4306BLL4947BLL0756BLR4306BLR7493BLL6504BSR4491BLR4492BLL6509BLL6508
BCEN331272 BCEN2424_2561BCEN2424_1078BCEN2424_2563BCEN2424_2563BCEN2424_1916BCEN2424_2562BCEN2424_2563BCEN2424_0765BCEN2424_0764BCEN2424_1807BCEN2424_1806BCEN2424_1805BCEN2424_1804
BCEN331271 BCEN_1950BCEN_0599BCEN_1952BCEN_1952BCEN_6163BCEN_1951BCEN_1952BCEN_0281BCEN_0280BCEN_6272BCEN_6274BCEN_6275
BCAN483179 BCAN_B1066BCAN_A0927BCAN_A0927BCAN_A1022BCAN_A2145BCAN_A0927BCAN_B0219BCAN_A1422BCAN_A1130BCAN_A1129BCAN_A1429BCAN_A1428
BBRO257310 BB3438BB4056BB4056BB4590BB4055BB4056BB4058BB4059BB3170BB3169BB3168BB3167
BAMB398577 BAMMC406_2480BAMMC406_0958BAMMC406_2482BAMMC406_2482BAMMC406_1834BAMMC406_2481BAMMC406_2482BAMMC406_0685BAMMC406_0684BAMMC406_1718BAMMC406_1717BAMMC406_1716BAMMC406_1715
BAMB339670 BAMB_2609BAMB_0954BAMB_2611BAMB_2611BAMB_1904BAMB_2610BAMB_2611BAMB_0660BAMB_0659BAMB_1745BAMB_1744BAMB_1743BAMB_1742
BABO262698 BRUAB2_0985BRUAB1_0925BRUAB1_0925BRUAB1_1011BRUAB1_2075BRUAB1_0925BRUAB2_0214BRUAB1_1386BRUAB1_1117BRUAB1_1116BRUAB1_1392BRUAB1_1391
ASP76114 EBA4454EBA5206EBA4451EBA4451EBA4962EBA4453EBA4451EBA658EBA7097EBA1255EBA1254EBA1253EBA1252
ASP62928 AZO1245AZO1518AZO1243AZO1243AZO2076AZO1244AZO1243AZO3126AZO3131AZO0932AZO0933AZO0934AZO0935
ASP232721 AJS_0985AJS_3346AJS_0983AJS_0983AJS_2588AJS_0983AJS_0978AJS_3111AJS_1175AJS_1176AJS_1177AJS_1178
ASAL382245 ASA_3375ASA_0858ASA_3372ASA_3372ASA_3373ASA_3372ASA_3371ASA_3370ASA_3369ASA_3368ASA_3367ASA_3366
APLE434271 APJL_1153APJL_1155APJL_1155APJL_1154APJL_1155APJL_2005APJL_2007APJL_2008APJL_2009APJL_1093APJL_1092
APLE416269 APL_1134APL_1136APL_1136APL_1135APL_1136APL_1958APL_1960APL_1961APL_1962APL_1077APL_1076
AHYD196024 AHA_0918AHA_3459AHA_0921AHA_0921AHA_0919AHA_0920AHA_0921AHA_0922AHA_0923AHA_0924AHA_0925AHA_0926AHA_0927
AFER243159 AFE_0779AFE_0742AFE_0742AFE_1167AFE_1164AFE_0742AFE_1163AFE_1162AFE_1202AFE_1201AFE_1200AFE_1199
AEHR187272 MLG_0567MLG_1502MLG_0570MLG_0570MLG_0568MLG_0569MLG_0570MLG_0571MLG_0572MLG_0573MLG_0574MLG_0575MLG_0576
ADEH290397 ADEH_2853ADEH_1694ADEH_3362ADEH_1502ADEH_1503ADEH_1694ADEH_1715ADEH_1512ADEH_0203ADEH_3522ADEH_3523
ACAU438753 AZC_4676AZC_3626AZC_3626AZC_1603AZC_3626AZC_2393AZC_2575AZC_3080AZC_3079AZC_2569AZC_2570
ABOR393595 ABO_2209ABO_2210ABO_2206ABO_2206ABO_2208ABO_2207ABO_2206ABO_2205ABO_2204ABO_2203ABO_2202ABO_2201ABO_2200
ABAU360910 BAV1378BAV0731BAV0731BAV3200BAV0732BAV0731BAV0725BAV0724BAV2338BAV2337BAV2336BAV2335
AAVE397945 AAVE_1307AAVE_1893AAVE_1305AAVE_1305AAVE_1821AAVE_1306AAVE_1305AAVE_1300AAVE_1294AAVE_1429AAVE_1430AAVE_1431AAVE_1432


Organism features enriched in list (features available for 191 out of the 206 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00018891692
Arrangment:Singles 0.0096658105286
Disease:Brucellosis 0.003642355
Disease:Bubonic_plague 0.001172166
Disease:Dysentery 0.001172166
Disease:Gastroenteritis 0.00110661013
Endospores:No 7.034e-1135211
Endospores:Yes 9.068e-8253
GC_Content_Range4:0-40 4.104e-349213
GC_Content_Range4:40-60 3.043e-7101224
GC_Content_Range4:60-100 1.592e-1181145
GC_Content_Range7:30-40 1.985e-229166
GC_Content_Range7:50-60 1.666e-962107
GC_Content_Range7:60-70 1.228e-1380134
Genome_Size_Range5:0-2 3.546e-292155
Genome_Size_Range5:2-4 0.000018343197
Genome_Size_Range5:4-6 1.540e-25116184
Genome_Size_Range5:6-10 3.970e-63047
Genome_Size_Range9:1-2 8.487e-232128
Genome_Size_Range9:2-3 6.612e-718120
Genome_Size_Range9:4-5 2.694e-95796
Genome_Size_Range9:5-6 5.882e-135988
Genome_Size_Range9:6-8 5.433e-72738
Gram_Stain:Gram_Neg 2.402e-38177333
Habitat:Multiple 0.006379970178
Habitat:Specialized 0.0001341653
Motility:No 2.858e-1612151
Motility:Yes 1.578e-15132267
Optimal_temp.:- 0.005377797257
Optimal_temp.:25-30 2.874e-71719
Oxygen_Req:Anaerobic 1.580e-126102
Oxygen_Req:Facultative 4.393e-895201
Pathogenic_in:Plant 0.00114661115
Shape:Coccus 6.894e-10582
Shape:Rod 4.989e-18160347
Shape:Spiral 0.0029799434
Temp._range:Mesophilic 0.0020280167473
Temp._range:Thermophilic 0.0000102135



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ORGANISMS CONTAINING AT MOST 2 GENES FROM THE GROUP:

Total number of orgs: 91
Effective number of orgs (counting one per cluster within 468 clusters): 81

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I2
TWHI218496 ncbi Tropheryma whipplei TW08/271
TWHI203267 ncbi Tropheryma whipplei Twist1
TVOL273116 ncbi Thermoplasma volcanium GSS11
TPEN368408 ncbi Thermofilum pendens Hrk 52
TACI273075 ncbi Thermoplasma acidophilum DSM 17281
STOK273063 ncbi Sulfolobus tokodaii 72
SSP64471 ncbi Synechococcus sp. CC93112
SSOL273057 ncbi Sulfolobus solfataricus P22
SPNE488221 ncbi Streptococcus pneumoniae 705852
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
PTOR263820 ncbi Picrophilus torridus DSM 97901
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A2
PMAR167555 ncbi Prochlorococcus marinus NATL1A2
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR146891 ncbi Prochlorococcus marinus AS96011
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PFUR186497 ncbi Pyrococcus furiosus DSM 36382
PAST100379 Onion yellows phytoplasma0
PAER178306 ncbi Pyrobaculum aerophilum IM21
NSEN222891 ncbi Neorickettsia sennetsu Miyayama2
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30912
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP1
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go12
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR368407 ncbi Methanoculleus marisnigri JR12
MMAR267377 ncbi Methanococcus maripaludis S21
MKAN190192 ncbi Methanopyrus kandleri AV192
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-12
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62422
MBAR269797 ncbi Methanosarcina barkeri Fusaro2
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-31
LXYL281090 ncbi Leifsonia xyli xyli CTCB072
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82932
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK112
LHEL405566 ncbi Lactobacillus helveticus DPC 45712
LACI272621 ncbi Lactobacillus acidophilus NCFM2
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I1
HPYL357544 ncbi Helicobacter pylori HPAG12
HPY ncbi Helicobacter pylori 266950
HBUT415426 ncbi Hyperthermus butylicus DSM 54562
HACI382638 ncbi Helicobacter acinonychis Sheeba1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3822
CMIC31964 ncbi Clavibacter michiganensis sepedonicus2
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF81
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CCAV227941 ncbi Chlamydophila caviae GPIC2
CABO218497 ncbi Chlamydophila abortus S26/32
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1352
BLON206672 ncbi Bifidobacterium longum NCC27052
BHER314723 ncbi Borrelia hermsii DAH2
BGAR290434 ncbi Borrelia garinii PBi2
BBUR224326 ncbi Borrelia burgdorferi B312
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)2
BAFZ390236 ncbi Borrelia afzelii PKo2
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K12
ALAI441768 ncbi Acholeplasma laidlawii PG-8A2


Names of the homologs of the genes in the group in each of these orgs
  G7843   G7842   G7458   EG11823   EG11758   EG11757   EG11363   EG11281   EG10595   EG10438   EG10437   EG10436   EG10435   
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX81RCIX2357
TWHI218496 TW0342
TWHI203267 TW406
TVOL273116 TVN0127
TPEN368408 TPEN_1647TPEN_0832
TACI273075 TA1451
STOK273063 ST2103ST2208
SSP64471 GSYN0008GSYN0100
SSOL273057 SSO2254SSO2195
SPNE488221 SP70585_2023SP70585_0731
SACI330779 SACI_0057
PTOR263820 PTO0607
PMAR93060 P9215_00061
PMAR74546 PMT9312_0007
PMAR59920 PMN2A_1334PMN2A_1214
PMAR167555 NATL1_00061NATL1_20891
PMAR167546 P9301ORF_0007
PMAR167542 P9515ORF_0007
PMAR167540 PMM0007
PMAR146891 A9601_00061
PISL384616 PISL_1934
PFUR186497 PF0200PF1534
PAST100379
PAER178306 PAE2520
NSEN222891 NSE_0164NSE_0165
MSYN262723
MSTA339860 MSP_0571MSP_1501
MSED399549 MSED_0758
MPUL272635 MYPU_0680
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM2208MM1682
MMAR444158 MMARC6_1623
MMAR426368 MMARC7_0290
MMAR402880 MMARC5_0557
MMAR368407 MEMAR_1683MEMAR_0502
MMAR267377 MMP1036
MKAN190192 MK0808MK0847
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_1280MHUN_2277
MGEN243273
MFLO265311
MCAP340047
MBUR259564 MBUR_1880MBUR_1703
MBAR269797 MBAR_A0366MBAR_A1494
MART243272
MAEO419665 MAEO_0253
LXYL281090 LXX14150LXX15960
LMES203120 LEUM_1531LEUM_1575
LLAC272623 L0276
LLAC272622 LACR_0487LACR_2517
LHEL405566 LHV_0750LHV_0428
LACI272621 LBA0705LBA0409
IHOS453591 IGNI_1056
HPYL357544 HPAG1_1310HPAG1_0757
HPY
HBUT415426 HBUT_0933HBUT_1010
HACI382638 HAC_0641
CSUL444179
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CMIC443906 CMM_1440CMM_2019
CMIC31964 CMS1536CMS1214
CMET456442 MBOO_1827
CMAQ397948 CMAQ_1640
CKOR374847 KCR_0384
CFEL264202 CF0631
CCAV227941 CCA_00377CCA_00265
CABO218497 CAB364CAB364
BXEN266265
BTUR314724 BT0203BT0204
BLON206672 BL1723BL1409
BHER314723 BH0203BH0204
BGAR290434 BG0203BG0204
BBUR224326 BB_0203BB_0204
BAPH372461 BCC_373BCC_371
BAFZ390236 BAPKO_0208BAPKO_0209
AYEL322098
AURANTIMONAS
APER272557 APE2362APE2153
ALAI441768 ACL_1393ACL_0837


Organism features enriched in list (features available for 86 out of the 91 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Singles 0.003858653286
Disease:Pharyngitis 8.467e-678
Disease:bronchitis_and_pneumonitis 8.467e-678
Endospores:No 4.256e-752211
GC_Content_Range4:0-40 1.490e-855213
GC_Content_Range4:40-60 0.008890924224
GC_Content_Range4:60-100 0.00001727145
GC_Content_Range7:0-30 1.675e-72147
GC_Content_Range7:30-40 0.005468234166
GC_Content_Range7:50-60 0.00651338107
GC_Content_Range7:60-70 4.525e-65134
Genome_Size_Range5:0-2 3.973e-2262155
Genome_Size_Range5:4-6 3.163e-132184
Genome_Size_Range5:6-10 0.0035220147
Genome_Size_Range9:0-1 1.110e-122027
Genome_Size_Range9:1-2 1.128e-942128
Genome_Size_Range9:3-4 0.0038104477
Genome_Size_Range9:4-5 9.794e-6296
Gram_Stain:Gram_Neg 0.000392235333
Gram_Stain:Gram_Pos 0.000337410150
Habitat:Multiple 0.000229313178
Habitat:Specialized 0.00890401453
Optimal_temp.:- 0.001755426257
Optimal_temp.:100 0.003114833
Optimal_temp.:37 0.001288726106
Oxygen_Req:Aerobic 0.006209718185
Shape:Irregular_coccus 0.00002191017
Shape:Rod 4.086e-1222347
Shape:Sphere 9.114e-121619
Temp._range:Hyperthermophilic 0.00009991123



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 66
Effective number of orgs (counting one per cluster within 468 clusters): 50

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
TCRU317025 ncbi Thiomicrospira crunogena XCL-2 0.0000301130013
NOCE323261 ncbi Nitrosococcus oceani ATCC 19707 0.0000608137213
NMUL323848 ncbi Nitrosospira multiformis ATCC 25196 0.0000650137913
HHAL349124 ncbi Halorhodospira halophila SL1 0.0000656138013
MFLA265072 ncbi Methylobacillus flagellatus KT 0.0001982150213
MCAP243233 ncbi Methylococcus capsulatus Bath 0.0002106150913
XFAS405440 ncbi Xylella fastidiosa M12 0.0003198117712
BCIC186490 Candidatus Baumannia cicadellinicola 0.000337167510
XFAS183190 ncbi Xylella fastidiosa Temecula1 0.0003603118912
ABOR393595 ncbi Alcanivorax borkumensis SK2 0.0004167159013
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-1 0.0004271159313
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN 0.000428469210
XFAS160492 ncbi Xylella fastidiosa 9a5c 0.0004693121612
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1 0.0005069122412
DNOD246195 ncbi Dichelobacter nodosus VCS1703A 0.000595994911
MMAR394221 ncbi Maricaulis maris MCS10 0.0006017124212
SDEG203122 ncbi Saccharophagus degradans 2-40 0.0007970167113
TTUR377629 ncbi Teredinibacter turnerae T7901 0.0009236169013
HNEP81032 Hyphomonas neptunium 0.0009477129112
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 23270 0.0010189129912
NEUR228410 ncbi Nitrosomonas europaea ATCC 19718 0.0010563130312
ASP76114 ncbi Aromatoleum aromaticum EbN1 0.0010934171213
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC10331 0.0011102171413
NEUT335283 ncbi Nitrosomonas eutropha C91 0.0011148130912
CJAP155077 Cellvibrio japonicus 0.0011708172113
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A 0.0012252172713
VEIS391735 ncbi Verminephrobacter eiseniae EF01-2 0.0012252172713
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 311018 0.0012438172913
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 1 0.0014538133912
LPNE297245 ncbi Legionella pneumophila Lens 0.0016420135312
LPNE400673 ncbi Legionella pneumophila Corby 0.0017145135812
LPNE297246 ncbi Legionella pneumophila Paris 0.0017745136212
DARO159087 ncbi Dechloromonas aromatica RCB 0.0017909177813
MPET420662 ncbi Methylibium petroleiphilum PM1 0.0019552179013
PNAP365044 ncbi Polaromonas naphthalenivorans CJ2 0.0019984179313
ELIT314225 ncbi Erythrobacter litoralis HTCC2594 0.0026082109111
PSP296591 ncbi Polaromonas sp. JS666 0.0027029183513
LCHO395495 ncbi Leptothrix cholodnii SP-6 0.0028607184313
AAVE397945 ncbi Acidovorax citrulli AAC00-1 0.0035313187313
ASP62928 ncbi Azoarcus sp. BH72 0.0037073188013
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-10 0.0038646188613
CBLO203907 ncbi Candidatus Blochmannia floridanus 0.00394946569
MAQU351348 ncbi Marinobacter aquaeolei VT8 0.0040840189413
BOVI236 Brucella ovis 0.0040933146312
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 306 0.0041691189713
XCAM487884 Xanthomonas campestris pv. paulliniae 0.0041979189813
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 33913 0.0042559190013
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 8004 0.0042559190013
MMAG342108 ncbi Magnetospirillum magneticum AMB-1 0.0042935146912
RFER338969 ncbi Rhodoferax ferrireducens T118 0.0048787192013
TDEN292415 ncbi Thiobacillus denitrificans ATCC 25259 0.0057374150612
NWIN323098 ncbi Nitrobacter winogradskyi Nb-255 0.0058439117811
BMEL359391 ncbi Brucella melitensis biovar Abortus 2308 0.0063902152012
BABO262698 ncbi Brucella abortus bv. 1 str. 9-941 0.0064393152112
CPSY167879 ncbi Colwellia psychrerythraea 34H 0.0065994196513
RPAL316057 ncbi Rhodopseudomonas palustris BisB5 0.0068447152912
PATL342610 ncbi Pseudoalteromonas atlantica T6c 0.0077821199013
BSUI470137 ncbi Brucella suis ATCC 23445 0.0078432154712
BQUI283165 ncbi Bartonella quintana Toulouse 0.00840497179
BBAC360095 ncbi Bartonella bacilliformis KC583 0.00850467189
MEXT419610 ncbi Methylobacterium extorquens PA1 0.0091744156812
BCAN483179 ncbi Brucella canis ATCC 23365 0.0093113157012
BSUI204722 ncbi Brucella suis 1330 0.0097333157612
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C 0.009786696110
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M 0.0098053157712
RPAL316058 ncbi Rhodopseudomonas palustris HaA2 0.0098053157712


Names of the homologs of the genes in the group in each of these orgs
  G7843   G7842   G7458   EG11823   EG11758   EG11757   EG11363   EG11281   EG10595   EG10438   EG10437   EG10436   EG10435   
TCRU317025 TCR_1081TCR_0633TCR_1083TCR_1083TCR_1817TCR_1082TCR_1083TCR_1084TCR_1085TCR_1086TCR_1087TCR_1090TCR_1091
NOCE323261 NOC_0340NOC_0341NOC_0337NOC_0337NOC_0339NOC_0338NOC_0337NOC_0336NOC_2591NOC_2590NOC_2589NOC_2588NOC_2587
NMUL323848 NMUL_A2530NMUL_A0714NMUL_A2532NMUL_A2532NMUL_A2384NMUL_A2531NMUL_A2532NMUL_A1144NMUL_A0092NMUL_A0447NMUL_A0446NMUL_A0445NMUL_A0444
HHAL349124 HHAL_0672HHAL_0225HHAL_0669HHAL_0669HHAL_0671HHAL_0670HHAL_0669HHAL_0668HHAL_0667HHAL_0666HHAL_0665HHAL_0664HHAL_0663
MFLA265072 MFLA_1379MFLA_1473MFLA_1381MFLA_1381MFLA_1912MFLA_1380MFLA_1381MFLA_1384MFLA_1385MFLA_1589MFLA_1588MFLA_1587MFLA_1586
MCAP243233 MCA_1302MCA_0539MCA_1296MCA_1296MCA_1301MCA_1300MCA_1296MCA_1692MCA_1691MCA_1983MCA_1982MCA_1981MCA_1980
XFAS405440 XFASM12_0591XFASM12_2082XFASM12_2082XFASM12_2084XFASM12_2083XFASM12_2082XFASM12_2081XFASM12_0071XFASM12_0070XFASM12_0069XFASM12_1787XFASM12_1786
BCIC186490 BCI_0586BCI_0585BCI_0585BCI_0585BCI_0584BCI_0583BCI_0581BCI_0580BCI_0579BCI_0578
XFAS183190 PD_0522PD_1898PD_1898PD_1900PD_1899PD_1898PD_1897PD_0067PD_0066PD_0065PD_1630PD_1629
ABOR393595 ABO_2209ABO_2210ABO_2206ABO_2206ABO_2208ABO_2207ABO_2206ABO_2205ABO_2204ABO_2203ABO_2202ABO_2201ABO_2200
AEHR187272 MLG_0567MLG_1502MLG_0570MLG_0570MLG_0568MLG_0569MLG_0570MLG_0571MLG_0572MLG_0573MLG_0574MLG_0575MLG_0576
CBLO291272 BPEN_077BPEN_080BPEN_080BPEN_079BPEN_080BPEN_081BPEN_082BPEN_083BPEN_084BPEN_085
XFAS160492 XF1257XF0759XF0759XF0757XF0758XF0759XF0760XF0090XF0089XF0088XF0452XF0453
PSP312153 PNUC_0597PNUC_0525PNUC_0595PNUC_0595PNUC_1363PNUC_0596PNUC_0595PNUC_1760PNUC_1286PNUC_1285PNUC_1284PNUC_1283
DNOD246195 DNO_0904DNO_0311DNO_0311DNO_0149DNO_0311DNO_1116DNO_1117DNO_0595DNO_0596DNO_0597DNO_0598
MMAR394221 MMAR10_0118MMAR10_1297MMAR10_1297MMAR10_1332MMAR10_0082MMAR10_1297MMAR10_0616MMAR10_2021MMAR10_1448MMAR10_1449MMAR10_2024MMAR10_2023
SDEG203122 SDE_2673SDE_2676SDE_2670SDE_2670SDE_2672SDE_2671SDE_2670SDE_2669SDE_2668SDE_2667SDE_2666SDE_2665SDE_2664
TTUR377629 TERTU_3564TERTU_3568TERTU_3561TERTU_3561TERTU_3563TERTU_3562TERTU_3561TERTU_3560TERTU_3559TERTU_3558TERTU_3557TERTU_3556TERTU_3554
HNEP81032 HNE_3103HNE_0674HNE_0674HNE_2080HNE_1887HNE_0674HNE_0913HNE_0452HNE_2006HNE_2005HNE_0469HNE_0470
AFER243159 AFE_0779AFE_0742AFE_0742AFE_1167AFE_1164AFE_0742AFE_1163AFE_1162AFE_1202AFE_1201AFE_1200AFE_1199
NEUR228410 NE0075NE0656NE0656NE0020NE0657NE0656NE1742NE1976NE1287NE1286NE1285NE1284
ASP76114 EBA4454EBA5206EBA4451EBA4451EBA4962EBA4453EBA4451EBA658EBA7097EBA1255EBA1254EBA1253EBA1252
XORY291331 XOO2736XOO2209XOO2733XOO2733XOO2735XOO2734XOO2733XOO2732XOO2947XOO2946XOO2945XOO0912XOO0913
NEUT335283 NEUT_2290NEUT_1896NEUT_1896NEUT_0145NEUT_1895NEUT_1896NEUT_1828NEUT_0386NEUT_0961NEUT_0962NEUT_0963NEUT_0964
CJAP155077 CJA_3093CJA_3117CJA_3082CJA_3082CJA_3087CJA_3086CJA_3082CJA_3081CJA_3080CJA_3079CJA_3078CJA_3077CJA_3076
XORY360094 XOOORF_1976XOOORF_2465XOOORF_1979XOOORF_1979XOOORF_1977XOOORF_1978XOOORF_1979XOOORF_1980XOOORF_1720XOOORF_1721XOOORF_1722XOOORF_4490XOOORF_4489
VEIS391735 VEIS_1713VEIS_0324VEIS_1711VEIS_1711VEIS_1426VEIS_1712VEIS_1711VEIS_4225VEIS_4227VEIS_0075VEIS_0074VEIS_0073VEIS_0072
XORY342109 XOO2581XOO2077XOO2578XOO2578XOO2580XOO2579XOO2578XOO2577XOO2799XOO2798XOO2797XOO0837XOO0838
LPNE272624 LPG2741LPG2698LPG2698LPG2700LPG2699LPG2698LPG2697LPG2696LPG0009LPG0010LPG0484LPG0485
LPNE297245 LPL2666LPL2626LPL2626LPL2628LPL2627LPL2626LPL2625LPL2624LPL0009LPL0010LPL0524LPL0525
LPNE400673 LPC_0389LPC_0437LPC_0437LPC_0435LPC_0436LPC_0437LPC_0438LPC_0439LPC_0010LPC_0011LPC_2860LPC_2859
LPNE297246 LPP2797LPP2753LPP2753LPP2755LPP2754LPP2753LPP2752LPP2751LPP0009LPP0010LPP0548LPP0549
DARO159087 DARO_3051DARO_3001DARO_3049DARO_3049DARO_2379DARO_3050DARO_3049DARO_3164DARO_3171DARO_2980DARO_2979DARO_2978DARO_2977
MPET420662 MPE_A2025MPE_A2911MPE_A2027MPE_A2027MPE_A1982MPE_A2026MPE_A2027MPE_A2031MPE_A2034MPE_A1991MPE_A1990MPE_A1989MPE_A1988
PNAP365044 PNAP_1172PNAP_1470PNAP_1170PNAP_1170PNAP_2436PNAP_1171PNAP_1170PNAP_1157PNAP_1155PNAP_1877PNAP_1878PNAP_1879PNAP_1880
ELIT314225 ELI_12430ELI_06765ELI_06765ELI_05050ELI_06765ELI_05795ELI_05520ELI_06260ELI_06255ELI_11330ELI_11335
PSP296591 BPRO_3197BPRO_1700BPRO_3199BPRO_3199BPRO_2698BPRO_3198BPRO_3199BPRO_3209BPRO_3212BPRO_2603BPRO_2602BPRO_2601BPRO_2600
LCHO395495 LCHO_1131LCHO_0985LCHO_1129LCHO_1129LCHO_2854LCHO_1130LCHO_1129LCHO_1125LCHO_1285LCHO_2863LCHO_2862LCHO_2861LCHO_2860
AAVE397945 AAVE_1307AAVE_1893AAVE_1305AAVE_1305AAVE_1821AAVE_1306AAVE_1305AAVE_1300AAVE_1294AAVE_1429AAVE_1430AAVE_1431AAVE_1432
ASP62928 AZO1245AZO1518AZO1243AZO1243AZO2076AZO1244AZO1243AZO3126AZO3131AZO0932AZO0933AZO0934AZO0935
XCAM316273 XCAORF_2574XCAORF_2437XCAORF_2571XCAORF_2571XCAORF_2573XCAORF_2572XCAORF_2571XCAORF_2570XCAORF_1951XCAORF_1952XCAORF_1953XCAORF_1254XCAORF_1255
CBLO203907 BFL075BFL078BFL078BFL077BFL078BFL079BFL080BFL081BFL082
MAQU351348 MAQU_2775MAQU_2776MAQU_2772MAQU_2772MAQU_2774MAQU_2773MAQU_2772MAQU_2771MAQU_2770MAQU_2769MAQU_2768MAQU_2767MAQU_2766
BOVI236 GBOORFA1076GBOORF0941GBOORF0941GBOORF1003GBOORF2094GBOORF0941GBOORFA0215GBOORF1404GBOORF1112GBOORF1111GBOORF1410GBOORF1409
XAXO190486 XAC2409XAC2039XAC2406XAC2406XAC2408XAC2407XAC2406XAC2405XAC1734XAC1735XAC1736XAC1155XAC1156
XCAM487884 XCC-B100_1876XCC-B100_2013XCC-B100_1879XCC-B100_1879XCC-B100_1877XCC-B100_1878XCC-B100_1879XCC-B100_1880XCC-B100_2544XCC-B100_2543XCC-B100_2542XCC-B100_3294XCC-B100_3293
XCAM190485 XCC2302XCC2168XCC2299XCC2299XCC2301XCC2300XCC2299XCC2298XCC1715XCC1716XCC1717XCC1050XCC1051
XCAM314565 XC_1813XC_1950XC_1816XC_1816XC_1814XC_1815XC_1816XC_1817XC_2516XC_2515XC_2514XC_3196XC_3195
MMAG342108 AMB0780AMB3238AMB3238AMB2798AMB4249AMB3238AMB4416AMB3506AMB2372AMB2373AMB3489AMB3490
RFER338969 RFER_3301RFER_1412RFER_3303RFER_3303RFER_1984RFER_3302RFER_3303RFER_3308RFER_1535RFER_2302RFER_2301RFER_2300RFER_2299
TDEN292415 TBD_1520TBD_1839TBD_1519TBD_1519TBD_0626TBD_1519TBD_1517TBD_1512TBD_1533TBD_0602TBD_0603TBD_0604
NWIN323098 NWI_1719NWI_1719NWI_1902NWI_0046NWI_1719NWI_2548NWI_2344NWI_1449NWI_1450NWI_2349NWI_2348
BMEL359391 BAB2_1006BAB1_0931BAB1_0931BAB1_1025BAB1_2102BAB1_0931BAB2_0212BAB1_1409BAB1_1134BAB1_1133BAB1_1416BAB1_1415
BABO262698 BRUAB2_0985BRUAB1_0925BRUAB1_0925BRUAB1_1011BRUAB1_2075BRUAB1_0925BRUAB2_0214BRUAB1_1386BRUAB1_1117BRUAB1_1116BRUAB1_1392BRUAB1_1391
CPSY167879 CPS_0319CPS_4379CPS_0322CPS_0322CPS_0320CPS_0321CPS_0322CPS_0323CPS_0324CPS_0325CPS_0326CPS_0327CPS_0328
RPAL316057 RPD_0170RPD_2443RPD_2443RPD_2899RPD_0206RPD_2443RPD_4032RPD_2097RPD_2594RPD_2595RPD_3352RPD_3351
PATL342610 PATL_3972PATL_3481PATL_3975PATL_3975PATL_3973PATL_3974PATL_3975PATL_3976PATL_3977PATL_3978PATL_3979PATL_3980PATL_3981
BSUI470137 BSUIS_B1040BSUIS_A0955BSUIS_A0955BSUIS_A1049BSUIS_A1941BSUIS_A0955BSUIS_B0222BSUIS_A1441BSUIS_A1160BSUIS_A1159BSUIS_A1448BSUIS_A1447
BQUI283165 BQ05880BQ05880BQ00270BQ05880BQ02570BQ05340BQ05350BQ08610BQ08600
BBAC360095 BARBAKC583_0802BARBAKC583_0802BARBAKC583_1355BARBAKC583_0802BARBAKC583_1201BARBAKC583_0624BARBAKC583_0625BARBAKC583_0924BARBAKC583_0923
MEXT419610 MEXT_2385MEXT_3661MEXT_3661MEXT_2373MEXT_4431MEXT_3661MEXT_4265MEXT_2654MEXT_2824MEXT_2825MEXT_2658MEXT_2657
BCAN483179 BCAN_B1066BCAN_A0927BCAN_A0927BCAN_A1022BCAN_A2145BCAN_A0927BCAN_B0219BCAN_A1422BCAN_A1130BCAN_A1129BCAN_A1429BCAN_A1428
BSUI204722 BR_A1045BR_0915BR_0915BR_1006BR_2100BR_0915BR_A0218BR_1390BR_1111BR_1110BR_1397BR_1396
CDES477974 DAUD_0137DAUD_1509DAUD_1509DAUD_0471DAUD_2016DAUD_1509DAUD_0554DAUD_0556DAUD_0557DAUD_1110
BMEL224914 BMEII0255BMEI1056BMEI1056BMEI0977BMEI2026BMEI1056BMEII1026BMEI0616BMEI0872BMEI0873BMEI0610BMEI0611
RPAL316058 RPB_0663RPB_3008RPB_3008RPB_2560RPB_0625RPB_3008RPB_4176RPB_3346RPB_2878RPB_2877RPB_2038RPB_2039


Organism features enriched in list (features available for 61 out of the 66 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.00791265112
Disease:Brucellosis 0.000010855
Disease:Legionnaire's_disease 0.000109544
Disease:Rice_bacterial_blight_disease 0.001095433
Endospores:No 0.00006819211
GC_Content_Range4:0-40 0.00005499213
GC_Content_Range4:60-100 0.000239727145
GC_Content_Range7:30-40 0.00057667166
GC_Content_Range7:50-60 0.004470519107
GC_Content_Range7:60-70 0.000054527134
Genome_Size_Range5:0-2 0.00013525155
Genome_Size_Range5:2-4 0.003498730197
Genome_Size_Range9:1-2 0.00012323128
Genome_Size_Range9:3-4 0.00021181877
Gram_Stain:Gram_Neg 3.130e-955333
Gram_Stain:Gram_Pos 9.890e-81150
Motility:No 0.00020685151
Motility:Yes 0.001220939267
Optimal_temp.:25-30 0.0015216719
Oxygen_Req:Aerobic 0.000072733185
Oxygen_Req:Anaerobic 0.00005771102
Pathogenic_in:Human 0.00005499213
Pathogenic_in:Plant 0.0021086615
Pathogenic_in:Rice 0.001095433



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951650.7396
GLYCOCAT-PWY (glycogen degradation I)2461860.7305
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001990.6815
PWY-5918 (heme biosynthesis I)2721890.6815
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491340.6777
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181650.6647
TYRFUMCAT-PWY (tyrosine degradation I)1841480.6519
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251660.6507
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861890.6466
PWY-4041 (γ-glutamyl cycle)2791860.6432
PWY-1269 (CMP-KDO biosynthesis I)3252000.6320
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911880.6276
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392030.6228
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961890.6226
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901850.6095
AST-PWY (arginine degradation II (AST pathway))1201090.5998
PWY-5148 (acyl-CoA hydrolysis)2271590.5951
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482010.5904
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831390.5880
PWY-5028 (histidine degradation II)1301130.5879
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911390.5612
PWY-5913 (TCA cycle variation IV)3011810.5563
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761310.5517
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911370.5464
P344-PWY (acrylonitrile degradation)2101450.5454
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291870.5346
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551610.5321
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491580.5270
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491580.5270
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561170.5152
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96860.5127
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001740.5108
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351060.5082
REDCITCYC (TCA cycle variation II)1741240.5055
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))1381070.5042
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982020.5000
PWY-5386 (methylglyoxal degradation I)3051730.4924
DAPLYSINESYN-PWY (lysine biosynthesis I)3421840.4862
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94820.4854
GLUCONSUPER-PWY (D-gluconate degradation)2291440.4832
GALACTCAT-PWY (D-galactonate degradation)104870.4814
PWY-46 (putrescine biosynthesis III)1381040.4796
GALACTITOLCAT-PWY (galactitol degradation)73690.4759
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3651890.4732
GALACTARDEG-PWY (D-galactarate degradation I)1511090.4703
GLUCARDEG-PWY (D-glucarate degradation I)1521090.4666
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222030.4632
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112890.4617
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891630.4614
PWY-6087 (4-chlorocatechol degradation)2231380.4574
PWY0-862 (cis-dodecenoyl biosynthesis)3431800.4567
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111690.4515
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81710.4486
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3741880.4481
PWY-5340 (sulfate activation for sulfonation)3851910.4473
VALDEG-PWY (valine degradation I)2901610.4454
PWY-5669 (phosphatidylethanolamine biosynthesis I)4161990.4451
PWY-1501 (mandelate degradation I)73660.4441
P601-PWY (D-camphor degradation)95780.4422
PWY-5188 (tetrapyrrole biosynthesis I)4392040.4401
PWY-561 (superpathway of glyoxylate cycle)1621100.4390
PWY-5084 (2-ketoglutarate dehydrogenase complex)3261720.4386
GLYOXYLATE-BYPASS (glyoxylate cycle)1691130.4383
PWY-3162 (tryptophan degradation V (side chain pathway))94770.4377
PWY0-981 (taurine degradation IV)106830.4354
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)135970.4336
PWY1-3 (polyhydroxybutyrate biosynthesis)115870.4307
PWY0-1353 (succinate to cytochrome bd oxidase electron transfer)1781150.4240
PWY-2361 (3-oxoadipate degradation)82690.4227
PWY0-501 (lipoate biosynthesis and incorporation I)3851870.4192
PWY-6193 (3-chlorocatechol degradation II (ortho))1941210.4189
PWY-6268 (adenosylcobalamin salvage from cobalamin)3171660.4176
PWY-81 (toluene degradation to benzoyl-CoA (anaerobic))67600.4168
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation)2121270.4097
GLUT-REDOX-PWY (glutathione redox reactions II)2461400.4094
PWY-6134 (tyrosine biosynthesis IV)89710.4053
PWY-4302 (aerobic respiration -- electron donor III)2141270.4041



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7842   G7458   EG11823   EG11758   EG11757   EG11363   EG11281   EG10595   EG10438   EG10437   EG10436   EG10435   
G78430.9990560.9993330.9992610.9991810.9996280.999540.9991820.9989260.9986680.9986360.9986920.998618
G78420.9988220.9987440.9988340.9992760.9992770.9991640.9990260.9990420.9988350.998870.998821
G74580.9999840.9990270.9996970.9999810.9995080.9993260.9991740.9990870.9987730.998704
EG118230.9989840.9996790.9999770.9994620.9992720.9991230.9990490.9987050.998638
EG117580.9995020.9993380.9990570.9989390.9991530.9990410.9989610.998897
EG117570.9997960.999550.9994030.9990770.9988520.9990170.998982
EG113630.999660.9995550.9994480.9993930.9992540.999214
EG112810.9998930.9997060.9993530.9991630.999151
EG105950.9998850.9997360.9995390.99952
EG104380.9999610.9997030.999675
EG104370.9997730.999716
EG104360.999994
EG10435



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PAIRWISE BLAST SCORES:

  G7843   G7842   G7458   EG11823   EG11758   EG11757   EG11363   EG11281   EG10595   EG10438   EG10437   EG10436   EG10435   
G78430.0f0------------
G7842-0.0f0-----------
G7458--0.0f03.3e-52--3.5e-44------
EG11823--4.6e-460.0f0--3.0e-33------
EG11758----0.0f0--------
EG11757-----0.0f0-------
EG11363--2.7e-382.1e-32--0.0f0------
EG11281-------0.0f0-----
EG10595--------0.0f0----
EG10438---------0.0f0---
EG10437----------0.0f0--
EG10436-----------0.0f0-
EG10435------------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-2982 (HflB, integral membrane ATP-dependent zinc metallopeptidase) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.154, average score: 0.943)
  Genes in pathway or complex:
             0.7764 0.4534 EG11506 (ftsH) EG11506-MONOMER (ATP-dependent zinc metalloprotease FtsH)
   *in cand* 0.9993 0.9987 EG10436 (hflK) EG10436-MONOMER (regulator of FtsH protease)
   *in cand* 0.9992 0.9986 EG10435 (hflC) EG10435-MONOMER (regulator of FtsH protease)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9986 EG10437 (hflX) EG10437-MONOMER (GTPase associated with the 50S subunit of the ribosome)
   *in cand* 0.9994 0.9987 EG10438 (hfq) EG10438-MONOMER (RNA-binding protein that affects many cellular processes; homolog of mammalian Sm/Sm-like proteins)
   *in cand* 0.9995 0.9989 EG10595 (miaA) EG10595-MONOMER (tRNA(i6A37) synthase)
   *in cand* 0.9994 0.9991 EG11281 (mutL) EG11281-MONOMER (MutL)
   *in cand* 0.9996 0.9992 EG11363 (amiB) NACMURLALAAMI2-MONOMER (N-acetylmuramoyl-L-alanine amidase 2)
   *in cand* 0.9994 0.9989 EG11757 (yjeE) EG11757-MONOMER (essential protein with weak ATPase activity)
   *in cand* 0.9991 0.9988 EG11758 (yjeF) EG11758-MONOMER (predicted carbohydrate kinase)
   *in cand* 0.9993 0.9986 EG11823 (amiA) NACMURLALAAMI1-MONOMER (N-acetylmuramoyl-L-alanine amidase 1)
   *in cand* 0.9993 0.9987 G7458 (amiC) G7458-MONOMER (N-acetylmuramyl-L-alanine amidase)
   *in cand* 0.9991 0.9987 G7842 (orn) G7842-MONOMER (oligoribonuclease monomer)
   *in cand* 0.9991 0.9986 G7843 (yjeS) G7843-MONOMER (predicted Fe-S electron transport protein)

- CPLX0-1321 (HflK-HflC complex; regulator of FtsH protease) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.154, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9992 0.9986 EG10435 (hflC) EG10435-MONOMER (regulator of FtsH protease)
   *in cand* 0.9993 0.9987 EG10436 (hflK) EG10436-MONOMER (regulator of FtsH protease)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9986 EG10437 (hflX) EG10437-MONOMER (GTPase associated with the 50S subunit of the ribosome)
   *in cand* 0.9994 0.9987 EG10438 (hfq) EG10438-MONOMER (RNA-binding protein that affects many cellular processes; homolog of mammalian Sm/Sm-like proteins)
   *in cand* 0.9995 0.9989 EG10595 (miaA) EG10595-MONOMER (tRNA(i6A37) synthase)
   *in cand* 0.9994 0.9991 EG11281 (mutL) EG11281-MONOMER (MutL)
   *in cand* 0.9996 0.9992 EG11363 (amiB) NACMURLALAAMI2-MONOMER (N-acetylmuramoyl-L-alanine amidase 2)
   *in cand* 0.9994 0.9989 EG11757 (yjeE) EG11757-MONOMER (essential protein with weak ATPase activity)
   *in cand* 0.9991 0.9988 EG11758 (yjeF) EG11758-MONOMER (predicted carbohydrate kinase)
   *in cand* 0.9993 0.9986 EG11823 (amiA) NACMURLALAAMI1-MONOMER (N-acetylmuramoyl-L-alanine amidase 1)
   *in cand* 0.9993 0.9987 G7458 (amiC) G7458-MONOMER (N-acetylmuramyl-L-alanine amidase)
   *in cand* 0.9991 0.9987 G7842 (orn) G7842-MONOMER (oligoribonuclease monomer)
   *in cand* 0.9991 0.9986 G7843 (yjeS) G7843-MONOMER (predicted Fe-S electron transport protein)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10435 EG10436 EG10437 EG10438 EG10595 EG11281 EG11363 EG11757 EG11758 G7842 G7843 (centered at EG11281)
G7458 (centered at G7458)
EG11823 (centered at EG11823)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7843   G7842   G7458   EG11823   EG11758   EG11757   EG11363   EG11281   EG10595   EG10438   EG10437   EG10436   EG10435   
349/623241/623305/623307/623411/623410/623308/623415/623410/623332/623394/623345/623353/623
AAEO224324:0:Tyes--11111111889-1111-6690---
AAUR290340:2:Tyes-783--1263---0-3576-
AAVE397945:0:Tyes135921111520121160135136137138
ABAC204669:0:Tyes3053-002142214102079343732143213--
ABAU360910:0:Tyes-65677248587101621162016191618
ABOR393595:0:Tyes91066876543210
ABUT367737:0:Tyes--4724720-472------
ACAU438753:0:Tyes3119-204620460-204680198314941493977978
ACEL351607:0:Tyes-1302--0---1137-1135809-
ACRY349163:8:Tyes1294-19861986014021986579-17141713--
ADEH290397:0:Tyes2676-1506319013071308150615271317-033503351
AEHR187272:0:Tyes093033123456789
AFER243159:0:Tyes-37004214180417416455454453452
AFUL224325:0:Tyes1538---0-------562
AHYD196024:0:Tyes0247033123456789
ALAI441768:0:Tyes552----------0-
AMAR234826:0:Tyes----119682-0---530531
AMAR329726:9:Tyes--106810680---3033-1981--
AMET293826:0:Tyes2767--145-01145169716961695-22482247
ANAE240017:0:Tyes-0------90-95240753
AORE350688:0:Tyes0----1636-647646645878--
APER272557:0:Tyes----216-------0
APHA212042:0:Tyes----0700-----525526
APLE416269:0:Tyes-565858-575892192392492510
APLE434271:0:Tno-616363-626396096296396410
ASAL382245:5:Tyes2411024092409-24102409240824072406240524042403
ASP1667:3:Tyes-974--1460---0-3724-
ASP232721:2:Tyes62285551554-502051190191192193
ASP62928:0:Tyes3276083253251176326325223322380123
ASP62977:0:Tyes1970--0295-294293292866832-
ASP76114:2:Tyes222226642220222025312221222003747342341340339
AVAR240292:3:Tyes2121-1357135783401357-2409-1726-4931
BABO262698:0:Tno715------0-----
BABO262698:1:Tno--007611130-441176175447446
BAFZ390236:2:Fyes-----------01
BAMB339670:3:Tno200230320042004127220032004101112111111101109
BAMB398577:3:Tno182527718271827116018261827101046104510441043
BAMY326423:0:Tyes282-16091831-0-105210761077---
BANT260799:0:Tno292----0-339333363335148217141714
BANT261594:2:Tno272----0-333332763275144116691669
BANT568206:2:Tyes3658----0-399462463242621802180
BANT592021:2:Tno287----0-353734743473151617571757
BAPH198804:0:Tyes-688--82---10
BAPH372461:0:Tyes-2------0----
BBAC264462:0:Tyes448012671267--1267-210-459-1242
BBAC360095:0:Tyes--163163-676163527-01278277
BBRO257310:0:Tyes-27890490414479039049069073210
BBUR224326:21:Fno-----------01
BCAN483179:0:Tno805------0-----
BCAN483179:1:Tno--009111770-478198197485484
BCEN331271:0:Tno----0----110-111112
BCEN331271:2:Tno169532616971697-1696169710----
BCEN331272:3:Tyes179431417961796115017951796101041104010391038
BCER226900:1:Tyes256----0-340933583357335317421742
BCER288681:0:Tno248----0-332132673266326016851685
BCER315749:1:Tyes214----0-204720202019201312631263
BCER405917:1:Tyes303----0-332032613260325417711771
BCER572264:1:Tno224----0-345033893388338217421742
BCIC186490:0:Tyes-877--7653210
BCLA66692:0:Tyes1197-3041319505873195192219201919---
BFRA272559:1:Tyes0-343934398805403439------
BFRA295405:0:Tno0-3798379810276563798------
BGAR290434:2:Fyes-----------01
BHAL272558:0:Tyes834--0-335-218621842183-29872986
BHEN283166:0:Tyes--568568--5680-451452774773
BHER314723:0:Fyes-----------01
BJAP224911:0:Fyes0-361036104261443610682458303800380158355834
BLIC279010:0:Tyes337--2209-022091283131213131340--
BLON206672:0:Tyes-317------0----
BMAL243160:1:Tno226009531017201721852851850849
BMAL320388:1:Tno15419751521521400153152101289128812871286
BMAL320389:1:Tyes21220010771020292030965964963962
BMEL224914:0:Tno0------780-----
BMEL224914:1:Tno--4584583751440458-626726801
BMEL359391:0:Tno711------0-----
BMEL359391:1:Tno--007510710-425171170432431
BOVI236:0:Tyes665------0-----
BOVI236:1:Tyes--00569820-387146145393392
BPAR257311:0:Tno-018671867235118661867186918701129112811271126
BPER257313:0:Tyes-220633276043101738173717361735
BPET94624:0:Tyes-157547947904804794764751679168016811682
BPSE272560:1:Tyes21631005681019721973671672673674
BPSE320372:1:Tno2197100-10233923401411141014091408
BPSE320373:1:Tno2186300135610226222631237123612351234
BPUM315750:0:Tyes331--1871-0-1095111011111120--
BQUI283165:0:Tyes--503503-0503210-454455750749
BSP107806:2:Tyes-799--932--10
BSP36773:2:Tyes208434920862086138820852086101278127712761275
BSP376:0:Tyes51-32443244391503244569852033573357252115210
BSUB:0:Tyes324-19252274-019251179120712081217--
BSUI204722:0:Tyes789------0-----
BSUI204722:1:Tyes--008711440-461190189468467
BSUI470137:0:Tno762------0-----
BSUI470137:1:Tno--00949590-473203202480479
BTHA271848:1:Tno2931001379105905891485148614871488
BTHE226186:0:Tyes1128-002281660------
BTHU281309:1:Tno221----0-324531953194318916371637
BTHU412694:1:Tno245----0-302129692968296215411541
BTRI382640:1:Tyes--10291029-01029230-1153115213711370
BTUR314724:0:Fyes-----------01
BVIE269482:7:Tyes191127419131913111619121913101003100210011000
BWEI315730:4:Tyes257----0-326832083207320117111711
CABO218497:0:Tyes--0---0------
CACE272562:0:Tyes0------------
CACE272562:1:Tyes----02350-1338133713361793564564
CAULO:0:Tyes2993-119911991292288611990142510681069--
CBEI290402:0:Tyes3373---460527902344234323423961852-
CBLO203907:0:Tyes-033-23-4-567
CBLO291272:0:Tno-033-23-45678
CBOT36826:1:Tno0---31583077--15581557-331331
CBOT441770:0:Tyes0---31183040-145414531452-318318
CBOT441771:0:Tno0---29772900-145114501449-196196
CBOT441772:1:Tno0---31943104-148814871486-333333
CBOT498213:1:Tno0---32023109-1511151015092880349349
CBOT508765:1:Tyes2520---28070-127112701269464550-
CBOT515621:2:Tyes0---33523253-168416831682-343343
CBOT536232:0:Tno0---34603355-163216311630-366366
CBUR227377:1:Tyes-22479798281797776-0--
CBUR360115:1:Tno-48800353352023-87--
CBUR434922:2:Tno-258134134136135134132131-0--
CCAV227941:1:Tyes------109---0--
CCHL340177:0:Tyes179-0094719220701328-1106--
CCON360104:2:Tyes--146014600-1460------
CCUR360105:0:Tyes--4654650-465------
CDES477974:0:Tyes0-1340134031818451340397399400931--
CDIF272563:1:Tyes420---73602659-18641863647738-
CDIP257309:0:Tyes-370------4-0--
CEFF196164:0:Fyes-544------5-0--
CFEL264202:1:Tyes------0------
CFET360106:0:Tyes--00460-0------
CGLU196627:0:Tyes-541------4-0--
CHOM360107:1:Tyes--123412340-1234------
CHUT269798:0:Tyes354-11311131552-72902718-3767--
CHYD246194:0:Tyes--18461846058--710709---
CJAP155077:0:Tyes17416611106543210
CJEI306537:0:Tyes-0--997---619-616--
CJEJ192222:0:Tyes--00--0------
CJEJ195099:0:Tno--00--0------
CJEJ354242:2:Tyes--00--0------
CJEJ360109:0:Tyes--00--0------
CJEJ407148:0:Tno--00--0------
CKLU431943:1:Tyes----27830-803804805-222222
CKOR374847:0:Tyes----0--------
CMAQ397948:0:Tyes----0--------
CMET456442:0:Tyes----0--------
CMIC31964:2:Tyes-316--------0--
CMIC443906:2:Tyes-0--------596--
CMUR243161:1:Tyes--00--0---116--
CNOV386415:0:Tyes239-0-1101737--945946-13751375
CPEL335992:0:Tyes-----189-----10
CPER195102:1:Tyes1033---01886-8698708711678-773
CPER195103:0:Tno1225---02098--106010611894-1016
CPER289380:3:Tyes1026---01823--8808811621-839
CPHY357809:0:Tyes1683---5560--2012-18834453444
CPRO264201:0:Fyes----0154-581188-1718--
CPSY167879:0:Tyes0394433123456789
CRUT413404:0:Tyes-0---693--605-91395394
CSAL290398:0:Tyes10442345678910
CSP501479:7:Fyes0----416-285-----
CSP501479:8:Fyes--13301330867-1330--35835901
CSP78:2:Tyes2400-002832305015197913738786787
CTEP194439:0:Tyes267-001168-01946909-1310--
CTET212717:0:Tyes0---19861919--876-1719296296
CTRA471472:0:Tyes--0---0---114--
CTRA471473:0:Tno--0---0---114--
CVES412965:0:Tyes-0---637--565--359358
CVIO243365:0:Tyes2537104525392539204125382539020922245224422432242
DARO159087:0:Tyes6766266746740675674789796605604603602
DDES207559:0:Tyes--1012-1697--31381428-026082609
DETH243164:0:Tyes0---243213-979548-544--
DGEO319795:1:Tyes1916---10860--806----
DHAF138119:0:Tyes0---27632717-313311310---
DNOD246195:0:Tyes-729156156-0156933934436437438439
DOLE96561:0:Tyes2427-99499464564499401634--404405
DPSY177439:2:Tyes----1539---869-187410
DRAD243230:3:Tyes----0807--155--600-
DRED349161:0:Tyes--02082225522762082126212601259637--
DSHI398580:5:Tyes2982-822822-31108220-1224122324092408
DSP216389:0:Tyes0---230200-855503-499--
DSP255470:0:Tno1042---320-675324-301--
DVUL882:1:Tyes---18761420-187601045-2738199198
ECAN269484:0:Tyes----103--0---630631
ECAR218491:0:Tyes2982300900298129802979297829772976297529742973
ECHA205920:0:Tyes----0--130---286287
ECOL199310:0:Tno224722464350224822492250225122522253225422552256
ECOL316407:0:Tno170417003670170517061707170817091710171117121713
ECOL331111:6:Tno191619153920191719181919192119221923192419251926
ECOL362663:0:Tno194419393770194519461947194819491950195119521953
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