CANDIDATE ID: 57

CANDIDATE ID: 57

NUMBER OF GENES: 13
AVERAGE SCORE:    9.9944927e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.5384615e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G6780 (ddpB) (b1486)
   Products of gene:
     - YDDR-MONOMER (YddR)
     - ABC-59-CPLX (YddO/YddP/YddQ/YddR/YddS ABC transporter)

- G6779 (ddpC) (b1485)
   Products of gene:
     - YDDQ-MONOMER (YddQ)
     - ABC-59-CPLX (YddO/YddP/YddQ/YddR/YddS ABC transporter)

- G6432 (gsiD) (b0832)
   Products of gene:
     - YLID-MONOMER (GsiD)
     - ABC-49-CPLX (gsiABCD glutathione ABC transporter)
       Reactions:
        glutathione[periplasmic space] + ATP + H2O  ->  glutathione[cytosol] + ADP + phosphate

- G6431 (gsiC) (b0831)
   Products of gene:
     - YLIC-MONOMER (GsiC)
     - ABC-49-CPLX (gsiABCD glutathione ABC transporter)
       Reactions:
        glutathione[periplasmic space] + ATP + H2O  ->  glutathione[cytosol] + ADP + phosphate

- G2002 (sapA) (b1294)
   Products of gene:
     - SAPA-MONOMER (SapA)
     - ABC-29-CPLX (peptide uptake ABC transporter)
       Reactions:
        ATP + a peptide[periplasmic space] + H2O  ->  ADP + phosphate + a peptide[cytosol]

- G2001 (sapB) (b1293)
   Products of gene:
     - SAPB-MONOMER (SapB)
     - ABC-29-CPLX (peptide uptake ABC transporter)
       Reactions:
        ATP + a peptide[periplasmic space] + H2O  ->  ADP + phosphate + a peptide[cytosol]

- G2000 (sapC) (b1292)
   Products of gene:
     - SAPC-MONOMER (SapC)
     - ABC-29-CPLX (peptide uptake ABC transporter)
       Reactions:
        ATP + a peptide[periplasmic space] + H2O  ->  ADP + phosphate + a peptide[cytosol]

- EG12628 (dppF) (b3540)
   Products of gene:
     - DPPF-MONOMER (DppF)
     - ABC-8-CPLX (dipeptide ABC transporter)
       Reactions:
        ATP + a dipeptide[periplasmic space] + H2O  ->  ADP + phosphate + a dipeptide[cytosol]

- EG12627 (dppD) (b3541)
   Products of gene:
     - DPPD-MONOMER (DppD)
     - ABC-8-CPLX (dipeptide ABC transporter)
       Reactions:
        ATP + a dipeptide[periplasmic space] + H2O  ->  ADP + phosphate + a dipeptide[cytosol]

- EG12626 (dppC) (b3542)
   Products of gene:
     - DPPC-MONOMER (DppC)
     - ABC-8-CPLX (dipeptide ABC transporter)
       Reactions:
        ATP + a dipeptide[periplasmic space] + H2O  ->  ADP + phosphate + a dipeptide[cytosol]

- EG12625 (dppB) (b3543)
   Products of gene:
     - DPPB-MONOMER (DppB)
     - ABC-8-CPLX (dipeptide ABC transporter)
       Reactions:
        ATP + a dipeptide[periplasmic space] + H2O  ->  ADP + phosphate + a dipeptide[cytosol]

- EG12076 (nikB) (b3477)
   Products of gene:
     - NIKB-MONOMER (NikB)
     - ABC-20-CPLX (nickel ABC transporter)
       Reactions:
        Ni2+[periplasmic space] + ATP + H2O  ->  Ni2+[cytosol] + ADP + phosphate

- EG10248 (dppA) (b3544)
   Products of gene:
     - DPPA-MONOMER (DppA)
     - ABC-8-CPLX (dipeptide ABC transporter)
       Reactions:
        ATP + a dipeptide[periplasmic space] + H2O  ->  ADP + phosphate + a dipeptide[cytosol]



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ORGANISMS CONTAINING AT LEAST 11 GENES FROM THE GROUP:

Total number of orgs: 156
Effective number of orgs (counting one per cluster within 468 clusters): 101

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175811
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295311
YPES377628 ncbi Yersinia pestis Nepal51611
YPES360102 ncbi Yersinia pestis Antiqua11
YPES214092 ncbi Yersinia pestis CO9211
YPES187410 ncbi Yersinia pestis KIM 1011
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808111
VEIS391735 ncbi Verminephrobacter eiseniae EF01-213
TTHE300852 ncbi Thermus thermophilus HB812
TTHE262724 ncbi Thermus thermophilus HB2713
TROS309801 ncbi Thermomicrobium roseum DSM 515913
TLET416591 ncbi Thermotoga lettingae TMO13
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT213
STRO369723 ncbi Salinispora tropica CNB-44012
STHE292459 ncbi Symbiobacterium thermophilum IAM 1486313
SSP644076 Silicibacter sp. TrichCH4B13
SSP292414 ncbi Ruegeria sp. TM104011
SSON300269 ncbi Shigella sonnei Ss04613
SPRO399741 ncbi Serratia proteamaculans 56813
SMEL266834 ncbi Sinorhizobium meliloti 102113
SMED366394 ncbi Sinorhizobium medicae WSM41913
SLAC55218 Ruegeria lacuscaerulensis13
SHIGELLA ncbi Shigella flexneri 2a str. 2457T13
SGLO343509 ncbi Sodalis glossinidius morsitans11
SFLE373384 ncbi Shigella flexneri 5 str. 840112
SFLE198214 ncbi Shigella flexneri 2a str. 30113
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47613
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6713
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 915013
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1813
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty213
SDYS300267 ncbi Shigella dysenteriae Sd19713
SBOY300268 ncbi Shigella boydii Sb22713
SARE391037 ncbi Salinispora arenicola CNS-20512
RXYL266117 ncbi Rubrobacter xylanophilus DSM 994113
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 1702513
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 1702913
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.113
RSOL267608 ncbi Ralstonia solanacearum GMI100011
RRUB269796 ncbi Rhodospirillum rubrum ATCC 1117013
RPOM246200 ncbi Ruegeria pomeroyi DSS-312
RMET266264 ncbi Ralstonia metallidurans CH3413
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 384113
RFER338969 ncbi Rhodoferax ferrireducens T11813
REUT381666 ncbi Ralstonia eutropha H1613
RETL347834 ncbi Rhizobium etli CFN 4213
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC300012
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a13
PSP296591 ncbi Polaromonas sp. JS66613
PPUT76869 ncbi Pseudomonas putida GB-113
PPUT351746 ncbi Pseudomonas putida F113
PPUT160488 ncbi Pseudomonas putida KT244013
PMUL272843 ncbi Pasteurella multocida multocida Pm7012
PMEN399739 ncbi Pseudomonas mendocina ymp12
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO111
PFLU220664 ncbi Pseudomonas fluorescens Pf-513
PFLU216595 ncbi Pseudomonas fluorescens SBW2512
PFLU205922 ncbi Pseudomonas fluorescens Pf0-113
PENT384676 ncbi Pseudomonas entomophila L4813
PAER208964 ncbi Pseudomonas aeruginosa PAO112
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA1411
OIHE221109 ncbi Oceanobacillus iheyensis HTE83112
OANT439375 ncbi Ochrobactrum anthropi ATCC 4918813
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-111
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E13
MSP409 Methylobacterium sp.13
MSP400668 ncbi Marinomonas sp. MWYL113
MSP266779 ncbi Chelativorans sp. BNC113
MLOT266835 ncbi Mesorhizobium loti MAFF30309913
MACE188937 ncbi Methanosarcina acetivorans C2A12
LSPH444177 ncbi Lysinibacillus sphaericus C3-4113
KRAD266940 ncbi Kineococcus radiotolerans SRS3021611
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857813
JSP290400 ncbi Jannaschia sp. CCS111
HPYL357544 ncbi Helicobacter pylori HPAG111
HPY ncbi Helicobacter pylori 2669512
HINF71421 ncbi Haemophilus influenzae Rd KW2012
HINF281310 ncbi Haemophilus influenzae 86-028NP12
HDUC233412 ncbi Haemophilus ducreyi 35000HP12
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 2377911
HACI382638 ncbi Helicobacter acinonychis Sheeba12
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-213
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 2558611
ESP42895 Enterobacter sp.13
EFER585054 ncbi Escherichia fergusonii ATCC 3546913
ECOO157 ncbi Escherichia coli O157:H7 EDL93313
ECOL83334 Escherichia coli O157:H713
ECOL585397 ncbi Escherichia coli ED1a13
ECOL585057 ncbi Escherichia coli IAI3913
ECOL585056 ncbi Escherichia coli UMN02613
ECOL585055 ncbi Escherichia coli 5598913
ECOL585035 ncbi Escherichia coli S8813
ECOL585034 ncbi Escherichia coli IAI113
ECOL481805 ncbi Escherichia coli ATCC 873913
ECOL469008 ncbi Escherichia coli BL21(DE3)13
ECOL439855 ncbi Escherichia coli SMS-3-513
ECOL413997 ncbi Escherichia coli B str. REL60613
ECOL409438 ncbi Escherichia coli SE1113
ECOL405955 ncbi Escherichia coli APEC O113
ECOL364106 ncbi Escherichia coli UTI8913
ECOL362663 ncbi Escherichia coli 53613
ECOL331111 ncbi Escherichia coli E24377A13
ECOL316407 ncbi Escherichia coli K-12 substr. W311013
ECOL199310 ncbi Escherichia coli CFT07313
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104312
DRED349161 ncbi Desulfotomaculum reducens MI-113
DRAD243230 ncbi Deinococcus radiodurans R113
DHAF138119 ncbi Desulfitobacterium hafniense Y5113
DGEO319795 ncbi Deinococcus geothermalis DSM 1130011
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G2012
CVIO243365 ncbi Chromobacterium violaceum ATCC 1247213
CSP501479 Citreicella sp. SE4512
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-290112
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C13
BVIE269482 ncbi Burkholderia vietnamiensis G413
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-2711
BTHA271848 ncbi Burkholderia thailandensis E26413
BSUI470137 ncbi Brucella suis ATCC 2344511
BSUI204722 ncbi Brucella suis 133011
BSP376 Bradyrhizobium sp.13
BSP36773 Burkholderia sp.13
BPUM315750 ncbi Bacillus pumilus SAFR-03213
BPSE320373 ncbi Burkholderia pseudomallei 66813
BPSE320372 ncbi Burkholderia pseudomallei 1710b13
BPSE272560 ncbi Burkholderia pseudomallei K9624313
BPET94624 Bordetella petrii13
BPER257313 ncbi Bordetella pertussis Tohama I11
BPAR257311 ncbi Bordetella parapertussis 1282213
BMEL359391 ncbi Brucella melitensis biovar Abortus 230812
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M13
BMAL320389 ncbi Burkholderia mallei NCTC 1024713
BMAL320388 ncbi Burkholderia mallei SAVP113
BMAL243160 ncbi Burkholderia mallei ATCC 2334413
BLIC279010 ncbi Bacillus licheniformis ATCC 1458013
BJAP224911 ncbi Bradyrhizobium japonicum USDA 11011
BHAL272558 ncbi Bacillus halodurans C-12513
BCLA66692 ncbi Bacillus clausii KSM-K1613
BCER288681 ncbi Bacillus cereus E33L11
BCEN331272 ncbi Burkholderia cenocepacia HI242413
BCEN331271 ncbi Burkholderia cenocepacia AU 105413
BCAN483179 ncbi Brucella canis ATCC 2336511
BBRO257310 ncbi Bordetella bronchiseptica RB5013
BANT592021 ncbi Bacillus anthracis A024812
BANT568206 ncbi Bacillus anthracis CDC 68411
BANT261594 ncbi Bacillus anthracis Ames Ancestor12
BANT260799 ncbi Bacillus anthracis Sterne11
BAMB398577 ncbi Burkholderia ambifaria MC40-613
BAMB339670 ncbi Burkholderia ambifaria AMMD13
BABO262698 ncbi Brucella abortus bv. 1 str. 9-94111
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL0312
APLE416269 ncbi Actinobacillus pleuropneumoniae L2012
AORE350688 ncbi Alkaliphilus oremlandii OhILAs12
AMET293826 ncbi Alkaliphilus metalliredigens QYMF13
ACAU438753 ncbi Azorhizobium caulinodans ORS 57111
ABAU360910 ncbi Bordetella avium 197N13
AAVE397945 ncbi Acidovorax citrulli AAC00-112


Names of the homologs of the genes in the group in each of these orgs
  G6780   G6779   G6432   G6431   G2002   G2001   G2000   EG12628   EG12627   EG12626   EG12625   EG12076   EG10248   
YPSE349747 YPSIP31758_4074YPSIP31758_3553YPSIP31758_4073YPSIP31758_1784YPSIP31758_1783YPSIP31758_1782YPSIP31758_4071YPSIP31758_4072YPSIP31758_4073YPSIP31758_4074YPSIP31758_4075
YPSE273123 YPTB3841YPTB0522YPTB3840YPTB2272YPTB2273YPTB2274YPTB3838YPTB3839YPTB3840YPTB3841YPTB3842
YPES377628 YPN_3651YPN_0637YPN_3650YPN_1815YPN_1816YPN_1817YPN_3648YPN_3649YPN_3650YPN_3651YPN_3652
YPES360102 YPA_2952YPA_2953YPA_3828YPA_1704YPA_1705YPA_1706YPA_3826YPA_3827YPA_3828YPA_3829YPA_3830
YPES214092 YPO3450YPO3451YPO4001YPO2355YPO2356YPO2357YPO3999YPO4000YPO4001YPO4002YPO4003
YPES187410 Y0737Y0736Y3828Y1977Y1976Y1975Y3830Y3829Y3828Y3826Y3825
YENT393305 YE0490YE0489YE4081YE2125YE2126YE2127YE4079YE4080YE4081YE4082YE4083
VEIS391735 VEIS_4120VEIS_4119VEIS_4593VEIS_4592VEIS_4121VEIS_4120VEIS_3435VEIS_4962VEIS_1298VEIS_1299VEIS_4120VEIS_0746VEIS_4591
TTHE300852 TTHA1337TTHA1338TTHA1338TTHA1337TTHA1336TTHA1337TTHA1632TTHA0473TTHA0472TTHA1338TTHA1337TTHA1336
TTHE262724 TT_C0972TT_C0973TT_C0973TT_C0972TT_C0971TT_C0972TT_C0973TT_C0102TT_C0101TT_C0973TT_C0972TT_C1270TT_C0971
TROS309801 TRD_1861TRD_1280TRD_A0701TRD_1524TRD_A0699TRD_1279TRD_A0701TRD_1630TRD_1629TRD_1280TRD_1861TRD_1279TRD_A0699
TLET416591 TLET_0854TLET_0855TLET_0200TLET_0201TLET_0202TLET_0854TLET_0073TLET_0644TLET_0648TLET_0855TLET_0854TLET_0854TLET_0071
STYP99287 STM3629STM3628STM0851STM0850STM1692STM1693STM1694STM3626STM3627STM3628STM3629STM0850STM3630
STRO369723 STROP_0217STROP_1671STROP_1671STROP_1670STROP_0217STROP_1671STROP_3819STROP_0219STROP_1671STROP_0217STROP_1670STROP_0216
STHE292459 STH2314STH2654STH2313STH2653STH2315STH1108STH2313STH1111STH2824STH2313STH2314STH1423STH2315
SSP644076 SCH4B_2930SCH4B_2931SCH4B_3405SCH4B_3732SCH4B_2895SCH4B_3822SCH4B_0505SCH4B_3702SCH4B_0504SCH4B_3405SCH4B_3406SCH4B_3732SCH4B_2895
SSP292414 TM1040_2715TM1040_2716TM1040_2716TM1040_2685TM1040_2686TM1040_0037TM1040_3601TM1040_3600TM1040_0036TM1040_0037TM1040_2686
SSON300269 SSO_1638SSO_1639SSO_0814SSO_0813SSO_1846SSO_1847SSO_1848SSO_3850SSO_3849SSO_3848SSO_3847SSO_3715SSO_3846
SPRO399741 SPRO_2348SPRO_2349SPRO_1553SPRO_1552SPRO_2629SPRO_2630SPRO_2631SPRO_0142SPRO_0141SPRO_0140SPRO_0139SPRO_2348SPRO_3431
SMEL266834 SMC01526SMC01527SMA0106SMC03127SMC00786SMC00787SMC00788SMC00790SMA1371SMC00788SMC00787SMC00787SMC00786
SMED366394 SMED_0330SMED_2324SMED_5165SMED_2854SMED_0329SMED_0330SMED_0331SMED_0333SMED_5064SMED_0331SMED_0330SMED_2854SMED_0329
SLAC55218 SL1157_0096SL1157_0095SL1157_1243SL1157_3372SL1157_0098SL1157_0096SL1157_0095SL1157_0093SL1157_0094SL1157_0095SL1157_0096SL1157_0096SL1157_0098
SHIGELLA DPPBS1873S0825S0824SAPASAPBSAPCDPPFDPPDDPPCDPPBNIKBDPPA
SGLO343509 SG0061SG0062SG0061SG1506SG1507SG1510SG0064SG0063SG0062SG0061SG0060
SFLE373384 SFV_3544SFV_1736SFV_0814SFV_1308SFV_1307SFV_1306SFV_3547SFV_3546SFV_1736SFV_3544SFV_3480SFV_3543
SFLE198214 AAN45029.1AAN45028.1AAN42416.1AAN42415.1AAN42910.1AAN42909.1AAN42908.1AAN45026.1AAN45027.1AAN45028.1AAN45029.1AAN44954.1AAN45030.1
SENT454169 SEHA_C3949SEHA_C3948SEHA_C0981SEHA_C0980SEHA_C1878SEHA_C1879SEHA_C1880SEHA_C3946SEHA_C3947SEHA_C3948SEHA_C3949SEHA_C0980SEHA_C3950
SENT321314 SCH_3560SCH_3559SCH_0846SCH_0845SCH_1685SCH_1686SCH_1687SCH_3557SCH_3558SCH_3559SCH_3560SCH_3560SCH_3561
SENT295319 SPA3486SPA3485SPA1904SPA1905SPA1192SPA1191SPA1182SPA3483SPA3484SPA3485SPA3486SPA1905SPA3487
SENT220341 STY4169STY4170STY0890STY0889STY1369STY1368STY1357STY4172STY4171STY4170STY4169STY0889STY4168
SENT209261 T3886T3887T2038T2039T1597T1598T1608T3889T3888T3887T3886T2039T3885
SDYS300267 SDY_4566SDY_4565SDY_0755SDY_0756SDY_1638SDY_1639SDY_1379SDY_4563SDY_4564SDY_4565SDY_4566SDY_3632SDY_4567
SBOY300268 SBO_1571SBO_1572SBO_0722SBO_0721SBO_1768SBO_1769SBO_1770SBO_3539SBO_3540SBO_3541SBO_3542SBO_3474SBO_1768
SARE391037 SARE_1662SARE_1663SARE_1663SARE_1662SARE_0256SARE_1663SARE_4209SARE_0258SARE_1663SARE_0256SARE_1662SARE_0255
RXYL266117 RXYL_2423RXYL_2422RXYL_2422RXYL_2423RXYL_2424RXYL_3026RXYL_2422RXYL_0876RXYL_0875RXYL_2422RXYL_2423RXYL_3026RXYL_2424
RSPH349102 RSPH17025_3964RSPH17025_0374RSPH17025_0374RSPH17025_3964RSPH17025_3963RSPH17025_3964RSPH17025_3965RSPH17025_3967RSPH17025_3966RSPH17025_3965RSPH17025_3964RSPH17025_3964RSPH17025_3963
RSPH349101 RSPH17029_3970RSPH17029_2463RSPH17029_2463RSPH17029_3970RSPH17029_3969RSPH17029_3970RSPH17029_3971RSPH17029_3973RSPH17029_4157RSPH17029_3971RSPH17029_3970RSPH17029_3970RSPH17029_3969
RSPH272943 RSP_3232RSP_0805RSP_0805RSP_3232RSP_3231RSP_3232RSP_3233RSP_3236RSP_3235RSP_3233RSP_3232RSP_3232RSP_3231
RSOL267608 RSC1381RSC1382RSC1382RSC1381RSC1380RSC1381RSC1884RSC2868RSC1381RSC1381RSC1380
RRUB269796 RRU_A2357RRU_A1919RRU_A2358RRU_A2357RRU_A2356RRU_A2357RRU_A2358RRU_A2360RRU_A2359RRU_A2358RRU_A2357RRU_A2276RRU_A2356
RPOM246200 SPO_1544SPO_1545SPO_1545SPO_1211SPO_2554SPO_1544SPO_1545SPO_3778SPO_1545SPO_1544SPO_0100SPO_2554
RMET266264 RMET_1409RMET_1410RMET_1410RMET_1409RMET_1408RMET_3157RMET_4577RMET_4580RMET_5091RMET_3156RMET_4576RMET_1409RMET_1408
RLEG216596 RL0779RL4649RL4577RL0779RL0778RL0779RL0780RL0782RL0781RL0780RL0779RL0779RL0778
RFER338969 RFER_1953RFER_1952RFER_3105RFER_3104RFER_1949RFER_1953RFER_1952RFER_1950RFER_1951RFER_1952RFER_1953RFER_0984RFER_1949
REUT381666 H16_A2099H16_A2098H16_A2098H16_A2099H16_A3298H16_A3297H16_A2098H16_B0716H16_B1125H16_A2098H16_B0720H16_A2950H16_A2100
RETL347834 RHE_CH03993RHE_CH03994RHE_PF00241RHE_PE00341RHE_CH00736RHE_CH00737RHE_CH00738RHE_CH00740RHE_CH00739RHE_CH00738RHE_CH00737RHE_CH00608RHE_CH00736
PSYR223283 PSPTO_4562PSPTO_3250PSPTO_3250PSPTO_2575PSPTO_4557PSPTO_4562PSPTO_4563PSPTO_4564PSPTO_4563PSPTO_4562PSPTO_2575PSPTO_4559
PSYR205918 PSYR_4239PSYR_2680PSYR_2680PSYR_2679PSYR_4235PSYR_4239PSYR_4240PSYR_4242PSYR_4241PSYR_4240PSYR_4239PSYR_2266PSYR_4236
PSP296591 BPRO_2812BPRO_2813BPRO_0137BPRO_0138BPRO_2816BPRO_2812BPRO_2813BPRO_2815BPRO_2814BPRO_2813BPRO_2812BPRO_2812BPRO_2816
PPUT76869 PPUTGB1_0924PPUTGB1_0923PPUTGB1_0923PPUTGB1_0924PPUTGB1_0928PPUTGB1_0924PPUTGB1_0923PPUTGB1_0921PPUTGB1_0922PPUTGB1_0923PPUTGB1_0924PPUTGB1_0924PPUTGB1_0928
PPUT351746 PPUT_0920PPUT_1881PPUT_1881PPUT_0920PPUT_0924PPUT_0920PPUT_0919PPUT_0917PPUT_0918PPUT_0919PPUT_0920PPUT_0920PPUT_0924
PPUT160488 PP_0881PP_0880PP_0880PP_4455PP_0885PP_0881PP_0880PP_0878PP_0879PP_0880PP_0881PP_3343PP_0885
PMUL272843 PM0237PM0238PM0238PM0237PM0911PM0912PM0913PM0240PM0239PM0238PM0237PM0236
PMEN399739 PMEN_0840PMEN_0839PMEN_0839PMEN_0840PMEN_0841PMEN_0840PMEN_0839PMEN_0837PMEN_0838PMEN_0839PMEN_0840PMEN_0845
PLUM243265 PLU0301PLU0302PLU0302PLU2587PLU2588PLU2589PLU0304PLU0303PLU0302PLU0301PLU0300
PFLU220664 PFL_4025PFL_4026PFL_0876PFL_4025PFL_0881PFL_0877PFL_0876PFL_0874PFL_0875PFL_0876PFL_0877PFL_4025PFL_0881
PFLU216595 PFLU0822PFLU2281PFLU2281PFLU0822PFLU0827PFLU0822PFLU0821PFLU0819PFLU0820PFLU0821PFLU0822PFLU0827
PFLU205922 PFL_0812PFL_0811PFL_0811PFL_0812PFL_0816PFL_0812PFL_0811PFL_0809PFL_0810PFL_0811PFL_0812PFL_0812PFL_0816
PENT384676 PSEEN1056PSEEN1055PSEEN1055PSEEN1056PSEEN1060PSEEN1056PSEEN1055PSEEN1053PSEEN1054PSEEN1055PSEEN1056PSEEN1056PSEEN1060
PAER208964 PA4503PA4504PA4504PA4503PA4500PA4503PA4504PA4506PA4505PA4504PA4503PA4502
PAER208963 PA14_58440PA14_58450PA14_58450PA14_58390PA14_58440PA14_58450PA14_58490PA14_58470PA14_58450PA14_58440PA14_58420
OIHE221109 OB2450OB2449OB3067OB3068OB2451OB2450OB2449OB2452OB3069OB2449OB2450OB2451
OANT439375 OANT_1583OANT_3090OANT_0628OANT_0627OANT_1582OANT_1583OANT_1584OANT_1586OANT_1585OANT_1584OANT_1583OANT_1583OANT_4405
MVAN350058 MVAN_3774MVAN_3775MVAN_3775MVAN_3774MVAN_3774MVAN_3775MVAN_0434MVAN_1021MVAN_3775MVAN_3774MVAN_3774
MSUC221988 MS1367MS1366MS1366MS1367MS0856MS0855MS0854MS1364MS1365MS1366MS1367MS0465MS2053
MSP409 M446_1691M446_1692M446_2849M446_2209M446_1690M446_1691M446_1692M446_1694M446_1693M446_1692M446_1691M446_2973M446_1690
MSP400668 MMWYL1_0113MMWYL1_2058MMWYL1_0112MMWYL1_0113MMWYL1_0114MMWYL1_0113MMWYL1_0112MMWYL1_0110MMWYL1_0111MMWYL1_0112MMWYL1_0113MMWYL1_4456MMWYL1_0114
MSP266779 MESO_0066MESO_1504MESO_1504MESO_1505MESO_0067MESO_0066MESO_0065MESO_0063MESO_0064MESO_0065MESO_0066MESO_0066MESO_0067
MLOT266835 MLR6671MLR6673MLR5515MLR5417MLR5416MLR5417MLR5418MLR5420MLR5419MLR5418MLR5417MLR5417MLR5416
MACE188937 MA4250MA0880MA0880MA4250MA4247MA4250MA1246MA0878MA0880MA4250MA4250MA3461
LSPH444177 BSPH_0319BSPH_0320BSPH_0320BSPH_0319BSPH_0318BSPH_0319BSPH_0320BSPH_2217BSPH_4235BSPH_0320BSPH_0319BSPH_2976BSPH_0318
KRAD266940 KRAD_2997KRAD_3861KRAD_3861KRAD_0146KRAD_2998KRAD_2997KRAD_3861KRAD_3861KRAD_2997KRAD_2997KRAD_2998
KPNE272620 GKPORF_B3251GKPORF_B4993GKPORF_B5300GKPORF_B5299GKPORF_B0330GKPORF_B0329GKPORF_B0316GKPORF_B3248GKPORF_B3249GKPORF_B3250GKPORF_B3251GKPORF_B3195GKPORF_B3252
JSP290400 JANN_2045JANN_2044JANN_2044JANN_4130JANN_2045JANN_4129JANN_4132JANN_4131JANN_4129JANN_4130JANN_4130
HPYL357544 HPAG1_0301HPAG1_0302HPAG1_0302HPAG1_0300HPAG1_0301HPAG1_0302HPAG1_0304HPAG1_0302HPAG1_0301HPAG1_0301HPAG1_0300
HPY HP0299HP0300HP0300HP0299HP0298HP0299HP0300HP0302HP0300HP0299HP0299HP0298
HINF71421 HI_1187HI_1186HI_1186HI_1187HI_1638HI_1639HI_1640HI_1184HI_1185HI_1186HI_1187HI_0853
HINF281310 NTHI1357NTHI1355NTHI1355NTHI1357NTHI1401NTHI1400NTHI1399NTHI1353NTHI1354NTHI1355NTHI1357NTHI1021
HDUC233412 HD_0312HD_0313HD_0313HD_0312HD_1230HD_1231HD_1232HD_0316HD_0315HD_0313HD_0312HD_0215
HAUR316274 HAUR_1606HAUR_1607HAUR_1607HAUR_1605HAUR_1606HAUR_3497HAUR_3498HAUR_1607HAUR_1606HAUR_0369HAUR_1605
HACI382638 HAC_0560HAC_0561HAC_0561HAC_0560HAC_0559HAC_0560HAC_0561HAC_0563HAC_0561HAC_0560HAC_0560HAC_0559
GTHE420246 GTNG_0479GTNG_0480GTNG_0480GTNG_0479GTNG_0478GTNG_0479GTNG_0480GTNG_3281GTNG_3282GTNG_0480GTNG_0479GTNG_0479GTNG_0478
FNUC190304 FN0397FN0398FN0398FN0397FN0396FN0397FN0398FN0399FN0398FN0397FN0396
ESP42895 ENT638_1104ENT638_2704ENT638_1326ENT638_1325ENT638_2171ENT638_2172ENT638_2173ENT638_0188ENT638_0187ENT638_0186ENT638_0185ENT638_1835ENT638_2107
EFER585054 EFER_3540EFER_3539EFER_0973EFER_0972EFER_1660EFER_1661EFER_1662EFER_3537EFER_3538EFER_3539EFER_3540EFER_0972EFER_3541
ECOO157 Z2224Z2225Z1056Z1055SAPASAPBSAPCDPPFDPPDDPPCDPPBNIKBDPPA
ECOL83334 ECS2090ECS2089ECS0911ECS0910ECS1871ECS1870ECS1869ECS4420ECS4421ECS4422ECS4423ECS4344ECS4424
ECOL585397 ECED1_4222ECED1_4809ECED1_0796ECED1_0795ECED1_1509ECED1_1508ECED1_1507ECED1_4219ECED1_4220ECED1_4221ECED1_4222ECED1_4150ECED1_4223
ECOL585057 ECIAI39_1750ECIAI39_1749ECIAI39_0809ECIAI39_0808ECIAI39_1645ECIAI39_1644ECIAI39_1643ECIAI39_4049ECIAI39_4050ECIAI39_4051ECIAI39_4052ECIAI39_3958ECIAI39_4053
ECOL585056 ECUMN_1740ECUMN_1739ECUMN_1020ECUMN_1019ECUMN_1599ECUMN_1598ECUMN_1597ECUMN_4050ECUMN_4051ECUMN_4052ECUMN_4053ECUMN_3958ECUMN_4055
ECOL585055 EC55989_1618EC55989_1617EC55989_0877EC55989_0876EC55989_1456EC55989_1455EC55989_1454EC55989_3991EC55989_3992EC55989_3993EC55989_3994EC55989_3885EC55989_3996
ECOL585035 ECS88_3963ECS88_4574ECS88_0849ECS88_0848ECS88_1440ECS88_1439ECS88_1438ECS88_3960ECS88_3961ECS88_3962ECS88_3963ECS88_3880ECS88_3964
ECOL585034 ECIAI1_1496ECIAI1_1495ECIAI1_0871ECIAI1_0870ECIAI1_1319ECIAI1_1318ECIAI1_1317ECIAI1_3698ECIAI1_3699ECIAI1_3700ECIAI1_3701ECIAI1_3624ECIAI1_3703
ECOL481805 ECOLC_2171ECOLC_2172ECOLC_2812ECOLC_2813ECOLC_2331ECOLC_2332ECOLC_2333ECOLC_0175ECOLC_0174ECOLC_0173ECOLC_0172ECOLC_0239ECOLC_0171
ECOL469008 ECBD_2153ECBD_2154ECBD_2791ECBD_2792ECBD_2323ECBD_2324ECBD_2325ECBD_0196ECBD_0195ECBD_0194ECBD_0193ECBD_0264ECBD_0192
ECOL439855 ECSMS35_1687ECSMS35_1688ECSMS35_0857ECSMS35_0856ECSMS35_1828ECSMS35_1829ECSMS35_1830ECSMS35_3859ECSMS35_3860ECSMS35_3861ECSMS35_3862ECSMS35_3761ECSMS35_3863
ECOL413997 ECB_01444ECB_01443ECB_00799ECB_00798ECB_01271ECB_01270ECB_01269ECB_03391ECB_03392ECB_03393ECB_03394ECB_03326ECB_03395
ECOL409438 ECSE_1576ECSE_1575ECSE_0890ECSE_0889ECSE_1346ECSE_1345ECSE_1344ECSE_3813ECSE_3814ECSE_3815ECSE_3816ECSE_3745ECSE_3817
ECOL405955 APECO1_2905APECO1_2375APECO1_1261APECO1_1262APECO1_457APECO1_456APECO1_455APECO1_2908APECO1_2907APECO1_2906APECO1_2905APECO1_2977APECO1_2904
ECOL364106 UTI89_C4081UTI89_C4672UTI89_C0835UTI89_C0834UTI89_C1571UTI89_C1570UTI89_C1569UTI89_C4078UTI89_C4079UTI89_C4080UTI89_C4081UTI89_C3994UTI89_C4082
ECOL362663 ECP_3644ECP_4316ECP_0846ECP_0845ECP_1352ECP_1351ECP_1350ECP_3641ECP_3642ECP_3643ECP_3644ECP_3572ECP_3646
ECOL331111 ECE24377A_1675ECE24377A_1674ECE24377A_0903ECE24377A_0902ECE24377A_1501ECE24377A_1500ECE24377A_1499ECE24377A_4032ECE24377A_4033ECE24377A_4034ECE24377A_4035ECE24377A_3959ECE24377A_4037
ECOL316407 ECK1480:JW1481:B1486ECK1479:JW1480:B1485ECK0822:JW0816:B0832ECK0821:JW0815:B0831ECK1289:JW1287:B1294ECK1288:JW1286:B1293ECK1287:JW1285:B1292ECK3527:JW3509:B3540ECK3528:JW3510:B3541ECK3529:JW3511:B3542ECK3530:JW3512:B3543ECK3461:JW3442:B3477ECK3531:JW3513:B3544
ECOL199310 C4358C5079C0917C0916C1771C1770C1769C4355C4356C4357C4358C4270C4361
ECAR218491 ECA4075ECA4074ECA2832ECA2833ECA1977ECA1976ECA1975ECA4390ECA4391ECA4392ECA4393ECA4394
DRED349161 DRED_0390DRED_0391DRED_2452DRED_2453DRED_2454DRED_2453DRED_2452DRED_2450DRED_2451DRED_2452DRED_2453DRED_2453DRED_2454
DRAD243230 DR_0959DR_0958DR_0958DR_0959DR_1290DR_0959DR_0958DR_1567DR_1568DR_0958DR_0959DR_0959DR_1290
DHAF138119 DSY0503DSY0504DSY0504DSY0503DSY0502DSY0503DSY0504DSY0506DSY0505DSY4357DSY0503DSY0503DSY0502
DGEO319795 DGEO_1190DGEO_0326DGEO_1190DGEO_1189DGEO_1190DGEO_1191DGEO_1340DGEO_1341DGEO_1190DGEO_1190DGEO_1189
DDES207559 DDE_1184DDE_1183DDE_1183DDE_1185DDE_1184DDE_1183DDE_1181DDE_1182DDE_1183DDE_1184DDE_1184DDE_1185
CVIO243365 CV_1098CV_1099CV_1099CV_1098CV_1097CV_1098CV_1099CV_1101CV_1100CV_1099CV_1098CV_1098CV_1097
CSP501479 CSE45_2493CSE45_2494CSE45_3762CSE45_4965CSE45_3619CSE45_2493CSE45_4964CSE45_4845CSE45_2494CSE45_4965CSE45_5425CSE45_3619
CHYD246194 CHY_1129CHY_1130CHY_1130CHY_1128CHY_1129CHY_1130CHY_1127CHY_1126CHY_1130CHY_1129CHY_1129CHY_1128
CDES477974 DAUD_0386DAUD_0387DAUD_0387DAUD_0386DAUD_1982DAUD_0386DAUD_0387DAUD_0389DAUD_0388DAUD_0387DAUD_0386DAUD_0386DAUD_1982
BVIE269482 BCEP1808_3129BCEP1808_5116BCEP1808_4722BCEP1808_4721BCEP1808_3130BCEP1808_3129BCEP1808_3128BCEP1808_3126BCEP1808_3127BCEP1808_3128BCEP1808_3129BCEP1808_3129BCEP1808_3130
BTHU281309 BT9727_4233BT9727_4232BT9727_4232BT9727_4233BT9727_4232BT9727_4235BT9727_4234BT9727_4232BT9727_4233BT9727_4233BT9727_4231
BTHA271848 BTH_I0221BTH_II1444BTH_II1115BTH_II1114BTH_I0220BTH_I0221BTH_I0222BTH_I0224BTH_I0223BTH_I0222BTH_I0221BTH_I0221BTH_I0220
BSUI470137 BSUIS_A1640BSUIS_A1639BSUIS_B0794BSUIS_A1640BSUIS_A1640BSUIS_A1639BSUIS_A1638BSUIS_B1089BSUIS_A1639BSUIS_A1640BSUIS_B0795
BSUI204722 BR_1585BR_A1093BR_A0802BR_1585BR_1585BR_1584BR_1582BR_A1094BR_1584BR_1585BR_A0803
BSP376 BRADO6822BRADO1799BRADO2503BRADO2921BRADO1743BRADO1742BRADO1741BRADO1739BRADO1740BRADO1741BRADO1742BRADO2921BRADO1743
BSP36773 BCEP18194_A6391BCEP18194_B1251BCEP18194_B1865BCEP18194_B1866BCEP18194_B2067BCEP18194_A6391BCEP18194_A6390BCEP18194_A6388BCEP18194_A6389BCEP18194_A6390BCEP18194_A6391BCEP18194_A6391BCEP18194_B2067
BPUM315750 BPUM_0822BPUM_0823BPUM_0823BPUM_0822BPUM_0821BPUM_0822BPUM_0823BPUM_1061BPUM_1060BPUM_0823BPUM_0822BPUM_3069BPUM_0821
BPSE320373 BURPS668_0244BURPS668_A1390BURPS668_A1850BURPS668_A1851BURPS668_0243BURPS668_0244BURPS668_0245BURPS668_0247BURPS668_0246BURPS668_0245BURPS668_0244BURPS668_0244BURPS668_0243
BPSE320372 BURPS1710B_A0462BURPS1710B_B3004BURPS1710B_B0387BURPS1710B_B0388BURPS1710B_A0461BURPS1710B_A0462BURPS1710B_A0463BURPS1710B_A0465BURPS1710B_A0464BURPS1710B_A0463BURPS1710B_A0462BURPS1710B_A0462BURPS1710B_A0461
BPSE272560 BPSL0250BPSS0952BPSS1304BPSS1305BPSL0249BPSL0250BPSL0251BPSL0253BPSL0252BPSL0251BPSL0250BPSL0250BPSL0249
BPET94624 BPET1795BPET2850BPET1796BPET1795BPET3079BPET1795BPET2850BPET0286BPET0285BPET2850BPET2851BPET0355BPET1794
BPER257313 BP2395BP2394BP2394BP2395BP2396BP2395BP2592BP2394BP2395BP3299BP2396
BPAR257311 BPP3260BPP1445BPP3259BPP3260BPP3261BPP3260BPP1445BPP3589BPP4126BPP1445BPP3260BPP4124BPP3261
BMEL359391 BAB1_1599BAB2_1051BAB2_0436BAB1_1599BAB1_1599BAB1_1598BAB1_1596BAB2_1052BAB1_1598BAB1_1599BAB2_0435BAB1_1600
BMEL224914 BMEI0435BMEI0436BMEI0436BMEI0435BMEI0433BMEI0435BMEI0436BMEI0438BMEII0206BMEI0436BMEI0435BMEII0488BMEI0433
BMAL320389 BMA10247_3377BMA10247_A1048BMA10247_A1356BMA10247_A1357BMA10247_3378BMA10247_3377BMA10247_A1048BMA10247_3374BMA10247_3375BMA10247_A1048BMA10247_3377BMA10247_3377BMA10247_3378
BMAL320388 BMASAVP1_A2970BMASAVP1_0249BMASAVP1_0399BMASAVP1_0400BMASAVP1_A2969BMASAVP1_A2970BMASAVP1_0249BMASAVP1_A2973BMASAVP1_A2972BMASAVP1_0249BMASAVP1_A2970BMASAVP1_A2970BMASAVP1_A2969
BMAL243160 BMA_3302BMA_A1276BMA_A0977BMA_A0976BMA_3301BMA_3302BMA_A1276BMA_3305BMA_3304BMA_A1276BMA_3302BMA_3302BMA_3301
BLIC279010 BL03047BL03048BL03048BL03047BL03046BL03047BL03048BL03317BL03044BL03048BL03047BL02419BL03046
BJAP224911 BLR1037BLR3339BLL0991BLL4895BLR1037BLL2866BLR1357BLR3344BLL2866BLR3342BLR3342
BHAL272558 BH3643BH3642BH0030BH0029BH3644BH3643BH3642BH3645BH0350BH3642BH3643BH0568BH3644
BCLA66692 ABC1241ABC1242ABC0032ABC0565ABC1240ABC0565ABC1242ABC0568ABC3658ABC1242ABC1241ABC1241ABC1240
BCER288681 BCE33L4245BCE33L4244BCE33L4244BCE33L4245BCE33L4244BCE33L4247BCE33L4246BCE33L4244BCE33L4245BCE33L4245BCE33L4243
BCEN331272 BCEN2424_3044BCEN2424_4593BCEN2424_4165BCEN2424_4164BCEN2424_4016BCEN2424_3044BCEN2424_3043BCEN2424_3041BCEN2424_3042BCEN2424_3043BCEN2424_3044BCEN2424_3044BCEN2424_3045
BCEN331271 BCEN_2430BCEN_3775BCEN_4201BCEN_4202BCEN_4350BCEN_2430BCEN_2429BCEN_2427BCEN_2428BCEN_2429BCEN_2430BCEN_2430BCEN_2431
BCAN483179 BCAN_A1620BCAN_B1115BCAN_B0816BCAN_A1620BCAN_A1620BCAN_A1619BCAN_A1617BCAN_B1116BCAN_A1619BCAN_A1620BCAN_B0817
BBRO257310 BB3711BB2519BB3710BB3711BB3712BB3711BB2519BB4024BB4596BB2519BB3711BB4594BB3712
BANT592021 BAA_4748BAA_4747BAA_4747BAA_4748BAA_4746BAA_4747BAA_4750BAA_4749BAA_4747BAA_4748BAA_4748BAA_4746
BANT568206 BAMEG_4767BAMEG_4766BAMEG_4766BAMEG_4767BAMEG_4766BAMEG_4769BAMEG_4768BAMEG_4766BAMEG_4767BAMEG_4767BAMEG_4765
BANT261594 GBAA4732GBAA4731GBAA4731GBAA4732GBAA4729GBAA4731GBAA4734GBAA4733GBAA4731GBAA4732GBAA4732GBAA4729
BANT260799 BAS4392BAS4391BAS4391BAS4392BAS4391BAS4394BAS4393BAS4391BAS4392BAS4392BAS4390
BAMB398577 BAMMC406_2955BAMMC406_4481BAMMC406_4054BAMMC406_4053BAMMC406_3923BAMMC406_2955BAMMC406_2954BAMMC406_2952BAMMC406_2953BAMMC406_2954BAMMC406_2955BAMMC406_2955BAMMC406_3923
BAMB339670 BAMB_3089BAMB_4019BAMB_3573BAMB_3572BAMB_3416BAMB_3089BAMB_3088BAMB_3086BAMB_3087BAMB_3088BAMB_3089BAMB_3089BAMB_3416
BABO262698 BRUAB1_1572BRUAB2_1032BRUAB2_0430BRUAB1_1572BRUAB1_1572BRUAB1_1571BRUAB1_1569BRUAB2_1033BRUAB1_1571BRUAB1_1572BRUAB2_0429
APLE434271 APJL_0065APJL_0066APJL_0066APJL_0065APJL_0064APJL_0801APJL_0800APJL_0068APJL_0067APJL_0066APJL_0065APJL_0866
APLE416269 APL_0065APL_0066APL_0066APL_0065APL_0064APL_0795APL_0794APL_0068APL_0067APL_0066APL_0065APL_2010
AORE350688 CLOS_1348CLOS_1349CLOS_1349CLOS_1348CLOS_1347CLOS_1349CLOS_1345CLOS_1344CLOS_1349CLOS_1348CLOS_1348CLOS_1347
AMET293826 AMET_2908AMET_2907AMET_2907AMET_2908AMET_2909AMET_2908AMET_2006AMET_2905AMET_2064AMET_1878AMET_2908AMET_4721AMET_2909
ACAU438753 AZC_1512AZC_2993AZC_2993AZC_2994AZC_0775AZC_0774AZC_2011AZC_2012AZC_2993AZC_2994AZC_2994
ABAU360910 BAV1160BAV1646BAV1161BAV1160BAV1159BAV1160BAV1646BAV2800BAV0998BAV1646BAV1645BAV3203BAV1159
AAVE397945 AAVE_1659AAVE_1660AAVE_1660AAVE_1659AAVE_1658AAVE_1659AAVE_0939AAVE_0938AAVE_0937AAVE_1659AAVE_1659AAVE_1658


Organism features enriched in list (features available for 147 out of the 156 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.001965340112
Disease:Anthrax 0.003919344
Disease:Brucellosis 0.000968055
Disease:Dysentery 0.000237866
Endospores:No 4.402e-827211
GC_Content_Range4:0-40 5.907e-1418213
GC_Content_Range4:40-60 0.003962269224
GC_Content_Range4:60-100 3.063e-760145
GC_Content_Range7:0-30 0.0000107147
GC_Content_Range7:30-40 1.846e-817166
GC_Content_Range7:50-60 3.823e-646107
GC_Content_Range7:60-70 7.372e-858134
Genome_Size_Range5:0-2 1.282e-156155
Genome_Size_Range5:2-4 3.386e-628197
Genome_Size_Range5:4-6 9.215e-1585184
Genome_Size_Range5:6-10 1.423e-72847
Genome_Size_Range9:1-2 1.280e-116128
Genome_Size_Range9:2-3 7.355e-711120
Genome_Size_Range9:4-5 2.320e-64396
Genome_Size_Range9:5-6 3.616e-74288
Genome_Size_Range9:6-8 6.444e-92638
Gram_Stain:Gram_Neg 5.897e-8111333
Gram_Stain:Gram_Pos 0.001522425150
Habitat:Aquatic 0.00017501091
Habitat:Multiple 0.003744657178
Motility:No 2.348e-716151
Motility:Yes 2.703e-691267
Oxygen_Req:Anaerobic 0.000015310102
Oxygen_Req:Facultative 0.000779266201
Pathogenic_in:Animal 0.00053802866
Shape:Coccus 1.565e-6582
Shape:Rod 1.695e-10119347
Temp._range:Mesophilic 0.0096857128473



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ORGANISMS CONTAINING AT MOST 2 GENES FROM THE GROUP:

Total number of orgs: 342
Effective number of orgs (counting one per cluster within 468 clusters): 270

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79011
TSP1755 Thermoanaerobacter sp.2
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX1
TERY203124 ncbi Trichodesmium erythraeum IMS1011
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252591
TDEN243275 ncbi Treponema denticola ATCC 354052
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-12
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R61
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F12
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SGOR29390 Streptococcus gordonii Challis0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB2
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SELO269084 ncbi Synechococcus elongatus PCC 63011
SDEG203122 ncbi Saccharophagus degradans 2-400
SAVE227882 ncbi Streptomyces avermitilis MA-46802
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83252
SAUR426430 ncbi Staphylococcus aureus aureus Newman2
SAUR367830 Staphylococcus aureus aureus USA3002
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4762
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2522
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW22
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP101510 ncbi Rhodococcus jostii RHA11
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI2
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP117 Pirellula sp.2
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PGIN242619 ncbi Porphyromonas gingivalis W830
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135142
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712022
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP103690 ncbi Nostoc sp. PCC 71202
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NMUL323848 ncbi Nitrosospira multiformis ATCC 251961
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197181
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16222
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM11
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT81
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-32
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby1
LPNE297246 ncbi Legionella pneumophila Paris1
LPNE297245 ncbi Legionella pneumophila Lens1
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 11
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP375286 ncbi Janthinobacterium sp. Marseille2
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HNEP81032 Hyphomonas neptunium0
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HHAL349124 ncbi Halorhodospira halophila SL10
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans1
GVIO251221 ncbi Gloeobacter violaceus PCC 74212
GOXY290633 ncbi Gluconobacter oxydans 621H0
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH12
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B12
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a2
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSHI398580 ncbi Dinoroseobacter shibae DFL 122
DPSY177439 ncbi Desulfotalea psychrophila LSv541
DOLE96561 ncbi Desulfococcus oleovorans Hxd31
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DARO159087 ncbi Dechloromonas aromatica RCB1
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E882
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg2
CPER289380 ncbi Clostridium perfringens SM1012
CPER195103 ncbi Clostridium perfringens ATCC 131242
CPER195102 ncbi Clostridium perfringens 132
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT2
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CJAP155077 Cellvibrio japonicus0
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CDIF272563 ncbi Clostridium difficile 6302
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD32
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB150
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-982
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1002
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294132
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN11
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP1667 Arthrobacter sp.0
APHA212042 ncbi Anaplasma phagocytophilum HZ0
ANAE240017 Actinomyces oris MG10
AMAR329726 ncbi Acaryochloris marina MBIC110171
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232701
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
AAUR290340 ncbi Arthrobacter aurescens TC10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G6780   G6779   G6432   G6431   G2002   G2001   G2000   EG12628   EG12627   EG12626   EG12625   EG12076   EG10248   
ZMOB264203
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
WSUC273121 WS0985
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TVOL273116
TTUR377629 TERTU_2103
TSP1755 TETH514_0621TETH514_0550
TPEN368408
TPAL243276
TKOD69014
TFUS269800 TFU_1822
TERY203124 TERY_1382
TELO197221 TLR1197
TDEN326298
TDEN292415 TBD_1668
TDEN243275 TDE_1271TDE_1272
TACI273075
SWOL335541
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP387093 SUN_0892SUN_0895
SSP321332
SSP321327
SSP1148
SSP1131
SSOL273057
SSAP342451 SSP1794
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101 SPR1193
SPNE170187
SPNE1313
SMUT210007
SMAR399550 SMAR_0342SMAR_0344
SHAE279808 SH1970
SGOR29390
SFUM335543 SFUM_3544SFUM_3545
SEPI176280 SE_0680
SEPI176279 SERP0570
SELO269084 SYC0718_C
SDEG203122
SAVE227882 SAV2765SAV3146
SAUR93062 SACOL0998
SAUR93061 SAOUHSC_00923SAOUHSC_00930
SAUR426430 NWMN_0856NWMN_0863
SAUR367830 SAUSA300_0887SAUSA300_0894
SAUR282459 SAS0856SAS0863
SAUR282458 SAR0949SAR0958
SAUR273036 SAB0852
SAUR196620 MW0868MW0875
SALA317655
SAGA211110 GBS1576
SAGA208435 SAG_1517
SAGA205921 SAK_1541
SACI330779
RTYP257363
RSP101510 RHA1_RO03931
RSAL288705
RRIC452659
RRIC392021
RPRO272947
RPAL316055
RMAS416276
RFEL315456
RDEN375451
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438 PTH_0941PTH_0941
PSTU379731
PSP312153
PSP117 RB12858RB12859
PRUM264731
PPEN278197
PMAR93060
PMAR74547
PMAR74546
PMAR59920 PMN2A_0705
PMAR167555 NATL1_15391
PMAR167546
PMAR167542 P9515ORF_1189
PMAR167540
PMAR167539
PMAR146891
PISL384616
PINT246198
PGIN242619
PDIS435591
PAST100379
PARS340102 PARS_0962PARS_1494
PARC259536
PAER178306
PACN267747 PPA2064PPA2156
OTSU357244
NWIN323098
NSP387092
NSP103690 ALR0141ALL2011
NSEN222891
NMUL323848 NMUL_A2331
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NFAR247156
NEUT335283
NEUR228410 NE2480
NARO279238
MXAN246197 MXAN_4664MXAN_4665
MTUB419947
MTUB336982
MTHE349307
MTHE264732
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPET420662 MPE_A3118
MPEN272633
MMYC272632
MMOB267748
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MGEN243273
MFLO265311
MEXT419610
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MAVI243243
MART243272
MAQU351348 MAQU_0452
MAER449447
MAEO419665 MAEO_0511MAEO_0511
MABS561007 MAB_0427
LXYL281090
LSAK314315
LREU557436
LPNE400673 LPC_2602
LPNE297246 LPP0747
LPNE297245 LPL0728
LPNE272624 LPG0692
LPLA220668
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT267671
LINT189518
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCHO395495
LCAS321967
LBRE387344 LVIS_1768
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
JSP375286 MMA_3521MMA_1402
IHOS453591
HNEP81032
HMOD498761
HHEP235279 HH_0416
HHAL349124
HBUT415426
HARS204773 HEAR3292
GVIO251221 GLL4122GLL4123
GOXY290633
GFOR411154
GBET391165 GBCGDNIH1_0124GBCGDNIH1_0125
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855 FRANEAN1_3461
FSP106370
FRANT
FPHI484022
FNOD381764 FNOD_1565FNOD_0193
FMAG334413
FJOH376686
FALN326424 FRAAL2818FRAAL2819
ERUM302409
ERUM254945
ELIT314225
EFAE226185
ECHA205920
ECAN269484
DSHI398580 DSHI_3794DSHI_0881
DPSY177439 DP0150
DOLE96561 DOLE_0941
DNOD246195
DETH243164
DARO159087 DARO_1319
CVES412965
CTRA471473
CTRA471472
CTET212717 CTC_01377CTC_01401
CSUL444179
CSP78
CRUT413404
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809 CPHY_0816CPHY_1998
CPER289380 CPR_2258CPR_2254
CPER195103 CPF_2555CPF_2551
CPER195102 CPE2273CPE2269
CPEL335992
CNOV386415 NT01CX_1742NT01CX_1743
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CJAP155077
CHUT269798
CHOM360107
CGLU196627
CFET360106
CFEL264202
CEFF196164
CDIP257309 DIP1741
CDIF272563 CD2670CD2671
CCUR360105 CCV52592_1322
CCON360104
CCHL340177 CAG_1157CAG_1883
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO291272
CBLO203907
CAULO
CABO218497
BTUR314724
BTHE226186
BSP107806
BLON206672 BL1346
BHER314723
BGAR290434
BFRA295405
BFRA272559
BCIC186490
BCER315749 BCER98_0223BCER98_0899
BBUR224326
BBAC264462 BD2190BD2189
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AVAR240292 AVA_1510AVA_0003
AURANTIMONAS
ASP76114 EBA5654
ASP62977
ASP62928
ASP1667
APHA212042
ANAE240017
AMAR329726 AM1_4650
AMAR234826
ALAI441768
AFER243159 AFE_0121
AEHR187272
ADEH290397
ACRY349163
ACEL351607
ABUT367737
ABOR393595
AAUR290340
AAEO224324


Organism features enriched in list (features available for 318 out of the 342 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000542446112
Disease:Pharyngitis 0.007524488
Disease:Wide_range_of_infections 0.00117381111
Disease:bronchitis_and_pneumonitis 0.007524488
Endospores:No 2.688e-6141211
Endospores:Yes 0.00010891653
GC_Content_Range4:0-40 5.692e-13157213
GC_Content_Range4:40-60 0.0001795102224
GC_Content_Range4:60-100 0.000021158145
GC_Content_Range7:0-30 0.00006563847
GC_Content_Range7:30-40 5.696e-8119166
GC_Content_Range7:50-60 0.001425345107
GC_Content_Range7:60-70 5.886e-651134
Genome_Size_Range5:0-2 1.594e-21133155
Genome_Size_Range5:2-4 0.0001847127197
Genome_Size_Range5:4-6 4.201e-2247184
Genome_Size_Range5:6-10 4.873e-61147
Genome_Size_Range9:0-1 4.621e-82727
Genome_Size_Range9:1-2 3.854e-14106128
Genome_Size_Range9:2-3 8.765e-686120
Genome_Size_Range9:4-5 9.226e-73196
Genome_Size_Range9:5-6 3.216e-141688
Genome_Size_Range9:6-8 2.273e-6738
Gram_Stain:Gram_Neg 0.0001615161333
Habitat:Host-associated 1.331e-6139206
Habitat:Multiple 0.000193578178
Motility:No 5.729e-10114151
Motility:Yes 1.534e-13102267
Oxygen_Req:Facultative 0.000055088201
Shape:Coccus 1.026e-76682
Shape:Rod 3.220e-16142347
Shape:Sphere 0.00102591719
Shape:Spiral 0.00037412834



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 64
Effective number of orgs (counting one per cluster within 468 clusters): 59

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
HACI382638 ncbi Helicobacter acinonychis Sheeba 1.408e-850712
HPY ncbi Helicobacter pylori 26695 1.953e-852112
TLET416591 ncbi Thermotoga lettingae TMO 5.171e-879913
MACE188937 ncbi Methanosarcina acetivorans C2A 2.929e-765312
TTHE262724 ncbi Thermus thermophilus HB27 5.717e-796013
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C 5.795e-796113
HPYL357544 ncbi Helicobacter pylori HPAG1 9.325e-752111
DRAD243230 ncbi Deinococcus radiodurans R1 1.940e-6105413
APER272557 ncbi Aeropyrum pernix K1 4.025e-62989
TROS309801 ncbi Thermomicrobium roseum DSM 5159 4.655e-6112713
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF8 0.00001853549
TTHE300852 ncbi Thermus thermophilus HB8 0.000026795412
RXYL266117 ncbi Rubrobacter xylanophilus DSM 9941 0.0000292129713
DRED349161 ncbi Desulfotomaculum reducens MI-1 0.0000608137213
STRO369723 ncbi Salinispora tropica CNB-440 0.0000760104212
SLAC55218 Ruegeria lacuscaerulensis 0.0000829140513
LSPH444177 ncbi Lysinibacillus sphaericus C3-41 0.0000927141713
SARE391037 ncbi Salinispora arenicola CNS-205 0.0000951106212
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 25586 0.000125482011
STHE292459 ncbi Symbiobacterium thermophilum IAM 14863 0.0001286145313
AMET293826 ncbi Alkaliphilus metalliredigens QYMF 0.0001754148813
AORE350688 ncbi Alkaliphilus oremlandii OhILAs 0.0002433115012
SSP644076 Silicibacter sp. TrichCH4B 0.0003091155413
DHAF138119 ncbi Desulfitobacterium hafniense Y51 0.0003683157513
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M 0.0003744157713
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 17025 0.0003806157913
BHAL272558 ncbi Bacillus halodurans C-125 0.0004167159013
BPUM315750 ncbi Bacillus pumilus SAFR-032 0.0004449159813
MSP266779 ncbi Chelativorans sp. BNC1 0.0005405162213
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.1 0.0005626162713
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-2901 0.0006489125012
BCLA66692 ncbi Bacillus clausii KSM-K16 0.0006704164913
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 17029 0.0006974165413
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-2 0.0007908167013
HMUK485914 ncbi Halomicrobium mukohataei DSM 12286 0.00097115579
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G20 0.0010468130212
RRUB269796 ncbi Rhodospirillum rubrum ATCC 11170 0.0010687170913
VEIS391735 ncbi Verminephrobacter eiseniae EF01-2 0.0012252172713
BLIC279010 ncbi Bacillus licheniformis ATCC 14580 0.0014560175013
HDUC233412 ncbi Haemophilus ducreyi 35000HP 0.0016852135612
BSP376 Bradyrhizobium sp. 0.0021643180413
RETL347834 ncbi Rhizobium etli CFN 42 0.0025350182613
MSP409 Methylobacterium sp. 0.0026084183013
PSP296591 ncbi Polaromonas sp. JS666 0.0027029183513
PABY272844 ncbi Pyrococcus abyssi GE5 0.00286674568
ABAU360910 ncbi Bordetella avium 197N 0.0032021185913
OANT439375 ncbi Ochrobactrum anthropi ATCC 49188 0.0036058187613
MLOT266835 ncbi Mesorhizobium loti MAFF303099 0.0037073188013
BPAR257311 ncbi Bordetella parapertussis 12822 0.0040840189413
DGEO319795 ncbi Deinococcus geothermalis DSM 11300 0.0043768114611
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E 0.0047478191613
RFER338969 ncbi Rhodoferax ferrireducens T118 0.0048787192013
KRAD266940 ncbi Kineococcus radiotolerans SRS30216 0.0052017116511
RPOM246200 ncbi Ruegeria pomeroyi DSS-3 0.0053505149712
OIHE221109 ncbi Oceanobacillus iheyensis HTE831 0.0054344149912
SMED366394 ncbi Sinorhizobium medicae WSM419 0.0056601194213
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 3841 0.0063837196013
BMEL359391 ncbi Brucella melitensis biovar Abortus 2308 0.0063902152012
SMEL266834 ncbi Sinorhizobium meliloti 1021 0.0067320196813
BBRO257310 ncbi Bordetella bronchiseptica RB50 0.0070046197413
HPYL85963 ncbi Helicobacter pylori J99 0.00847715268
BPET94624 Bordetella petrii 0.0096435202313
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-1 0.0096647123611
HINF281310 ncbi Haemophilus influenzae 86-028NP 0.0099508157912


Names of the homologs of the genes in the group in each of these orgs
  G6780   G6779   G6432   G6431   G2002   G2001   G2000   EG12628   EG12627   EG12626   EG12625   EG12076   EG10248   
HACI382638 HAC_0560HAC_0561HAC_0561HAC_0560HAC_0559HAC_0560HAC_0561HAC_0563HAC_0561HAC_0560HAC_0560HAC_0559
HPY HP0299HP0300HP0300HP0299HP0298HP0299HP0300HP0302HP0300HP0299HP0299HP0298
TLET416591 TLET_0854TLET_0855TLET_0200TLET_0201TLET_0202TLET_0854TLET_0073TLET_0644TLET_0648TLET_0855TLET_0854TLET_0854TLET_0071
MACE188937 MA4250MA0880MA0880MA4250MA4247MA4250MA1246MA0878MA0880MA4250MA4250MA3461
TTHE262724 TT_C0972TT_C0973TT_C0973TT_C0972TT_C0971TT_C0972TT_C0973TT_C0102TT_C0101TT_C0973TT_C0972TT_C1270TT_C0971
CDES477974 DAUD_0386DAUD_0387DAUD_0387DAUD_0386DAUD_1982DAUD_0386DAUD_0387DAUD_0389DAUD_0388DAUD_0387DAUD_0386DAUD_0386DAUD_1982
HPYL357544 HPAG1_0301HPAG1_0302HPAG1_0302HPAG1_0300HPAG1_0301HPAG1_0302HPAG1_0304HPAG1_0302HPAG1_0301HPAG1_0301HPAG1_0300
DRAD243230 DR_0959DR_0958DR_0958DR_0959DR_1290DR_0959DR_0958DR_1567DR_1568DR_0958DR_0959DR_0959DR_1290
APER272557 APE0303APE1396APE2258APE2257APE0303APE1402APE1578APE2258APE2257
TROS309801 TRD_1861TRD_1280TRD_A0701TRD_1524TRD_A0699TRD_1279TRD_A0701TRD_1630TRD_1629TRD_1280TRD_1861TRD_1279TRD_A0699
CKOR374847 KCR_0930KCR_0931KCR_0931KCR_0930KCR_0510KCR_0930KCR_0931KCR_0930KCR_0929
TTHE300852 TTHA1337TTHA1338TTHA1338TTHA1337TTHA1336TTHA1337TTHA1632TTHA0473TTHA0472TTHA1338TTHA1337TTHA1336
RXYL266117 RXYL_2423RXYL_2422RXYL_2422RXYL_2423RXYL_2424RXYL_3026RXYL_2422RXYL_0876RXYL_0875RXYL_2422RXYL_2423RXYL_3026RXYL_2424
DRED349161 DRED_0390DRED_0391DRED_2452DRED_2453DRED_2454DRED_2453DRED_2452DRED_2450DRED_2451DRED_2452DRED_2453DRED_2453DRED_2454
STRO369723 STROP_0217STROP_1671STROP_1671STROP_1670STROP_0217STROP_1671STROP_3819STROP_0219STROP_1671STROP_0217STROP_1670STROP_0216
SLAC55218 SL1157_0096SL1157_0095SL1157_1243SL1157_3372SL1157_0098SL1157_0096SL1157_0095SL1157_0093SL1157_0094SL1157_0095SL1157_0096SL1157_0096SL1157_0098
LSPH444177 BSPH_0319BSPH_0320BSPH_0320BSPH_0319BSPH_0318BSPH_0319BSPH_0320BSPH_2217BSPH_4235BSPH_0320BSPH_0319BSPH_2976BSPH_0318
SARE391037 SARE_1662SARE_1663SARE_1663SARE_1662SARE_0256SARE_1663SARE_4209SARE_0258SARE_1663SARE_0256SARE_1662SARE_0255
FNUC190304 FN0397FN0398FN0398FN0397FN0396FN0397FN0398FN0399FN0398FN0397FN0396
STHE292459 STH2314STH2654STH2313STH2653STH2315STH1108STH2313STH1111STH2824STH2313STH2314STH1423STH2315
AMET293826 AMET_2908AMET_2907AMET_2907AMET_2908AMET_2909AMET_2908AMET_2006AMET_2905AMET_2064AMET_1878AMET_2908AMET_4721AMET_2909
AORE350688 CLOS_1348CLOS_1349CLOS_1349CLOS_1348CLOS_1347CLOS_1349CLOS_1345CLOS_1344CLOS_1349CLOS_1348CLOS_1348CLOS_1347
SSP644076 SCH4B_2930SCH4B_2931SCH4B_3405SCH4B_3732SCH4B_2895SCH4B_3822SCH4B_0505SCH4B_3702SCH4B_0504SCH4B_3405SCH4B_3406SCH4B_3732SCH4B_2895
DHAF138119 DSY0503DSY0504DSY0504DSY0503DSY0502DSY0503DSY0504DSY0506DSY0505DSY4357DSY0503DSY0503DSY0502
BMEL224914 BMEI0435BMEI0436BMEI0436BMEI0435BMEI0433BMEI0435BMEI0436BMEI0438BMEII0206BMEI0436BMEI0435BMEII0488BMEI0433
RSPH349102 RSPH17025_3964RSPH17025_0374RSPH17025_0374RSPH17025_3964RSPH17025_3963RSPH17025_3964RSPH17025_3965RSPH17025_3967RSPH17025_3966RSPH17025_3965RSPH17025_3964RSPH17025_3964RSPH17025_3963
BHAL272558 BH3643BH3642BH0030BH0029BH3644BH3643BH3642BH3645BH0350BH3642BH3643BH0568BH3644
BPUM315750 BPUM_0822BPUM_0823BPUM_0823BPUM_0822BPUM_0821BPUM_0822BPUM_0823BPUM_1061BPUM_1060BPUM_0823BPUM_0822BPUM_3069BPUM_0821
MSP266779 MESO_0066MESO_1504MESO_1504MESO_1505MESO_0067MESO_0066MESO_0065MESO_0063MESO_0064MESO_0065MESO_0066MESO_0066MESO_0067
RSPH272943 RSP_3232RSP_0805RSP_0805RSP_3232RSP_3231RSP_3232RSP_3233RSP_3236RSP_3235RSP_3233RSP_3232RSP_3232RSP_3231
CHYD246194 CHY_1129CHY_1130CHY_1130CHY_1128CHY_1129CHY_1130CHY_1127CHY_1126CHY_1130CHY_1129CHY_1129CHY_1128
BCLA66692 ABC1241ABC1242ABC0032ABC0565ABC1240ABC0565ABC1242ABC0568ABC3658ABC1242ABC1241ABC1241ABC1240
RSPH349101 RSPH17029_3970RSPH17029_2463RSPH17029_2463RSPH17029_3970RSPH17029_3969RSPH17029_3970RSPH17029_3971RSPH17029_3973RSPH17029_4157RSPH17029_3971RSPH17029_3970RSPH17029_3970RSPH17029_3969
GTHE420246 GTNG_0479GTNG_0480GTNG_0480GTNG_0479GTNG_0478GTNG_0479GTNG_0480GTNG_3281GTNG_3282GTNG_0480GTNG_0479GTNG_0479GTNG_0478
HMUK485914 HMUK_0216HMUK_0539HMUK_1597HMUK_0217HMUK_1596HMUK_0537HMUK_0538HMUK_0216HMUK_0217
DDES207559 DDE_1184DDE_1183DDE_1183DDE_1185DDE_1184DDE_1183DDE_1181DDE_1182DDE_1183DDE_1184DDE_1184DDE_1185
RRUB269796 RRU_A2357RRU_A1919RRU_A2358RRU_A2357RRU_A2356RRU_A2357RRU_A2358RRU_A2360RRU_A2359RRU_A2358RRU_A2357RRU_A2276RRU_A2356
VEIS391735 VEIS_4120VEIS_4119VEIS_4593VEIS_4592VEIS_4121VEIS_4120VEIS_3435VEIS_4962VEIS_1298VEIS_1299VEIS_4120VEIS_0746VEIS_4591
BLIC279010 BL03047BL03048BL03048BL03047BL03046BL03047BL03048BL03317BL03044BL03048BL03047BL02419BL03046
HDUC233412 HD_0312HD_0313HD_0313HD_0312HD_1230HD_1231HD_1232HD_0316HD_0315HD_0313HD_0312HD_0215
BSP376 BRADO6822BRADO1799BRADO2503BRADO2921BRADO1743BRADO1742BRADO1741BRADO1739BRADO1740BRADO1741BRADO1742BRADO2921BRADO1743
RETL347834 RHE_CH03993RHE_CH03994RHE_PF00241RHE_PE00341RHE_CH00736RHE_CH00737RHE_CH00738RHE_CH00740RHE_CH00739RHE_CH00738RHE_CH00737RHE_CH00608RHE_CH00736
MSP409 M446_1691M446_1692M446_2849M446_2209M446_1690M446_1691M446_1692M446_1694M446_1693M446_1692M446_1691M446_2973M446_1690
PSP296591 BPRO_2812BPRO_2813BPRO_0137BPRO_0138BPRO_2816BPRO_2812BPRO_2813BPRO_2815BPRO_2814BPRO_2813BPRO_2812BPRO_2812BPRO_2816
PABY272844 PAB0092PAB0093PAB0093PAB0092PAB0093PAB1874PAB0093PAB0092
ABAU360910 BAV1160BAV1646BAV1161BAV1160BAV1159BAV1160BAV1646BAV2800BAV0998BAV1646BAV1645BAV3203BAV1159
OANT439375 OANT_1583OANT_3090OANT_0628OANT_0627OANT_1582OANT_1583OANT_1584OANT_1586OANT_1585OANT_1584OANT_1583OANT_1583OANT_4405
MLOT266835 MLR6671MLR6673MLR5515MLR5417MLR5416MLR5417MLR5418MLR5420MLR5419MLR5418MLR5417MLR5417MLR5416
BPAR257311 BPP3260BPP1445BPP3259BPP3260BPP3261BPP3260BPP1445BPP3589BPP4126BPP1445BPP3260BPP4124BPP3261
DGEO319795 DGEO_1190DGEO_0326DGEO_1190DGEO_1189DGEO_1190DGEO_1191DGEO_1340DGEO_1341DGEO_1190DGEO_1190DGEO_1189
MSUC221988 MS1367MS1366MS1366MS1367MS0856MS0855MS0854MS1364MS1365MS1366MS1367MS0465MS2053
RFER338969 RFER_1953RFER_1952RFER_3105RFER_3104RFER_1949RFER_1953RFER_1952RFER_1950RFER_1951RFER_1952RFER_1953RFER_0984RFER_1949
KRAD266940 KRAD_2997KRAD_3861KRAD_3861KRAD_0146KRAD_2998KRAD_2997KRAD_3861KRAD_3861KRAD_2997KRAD_2997KRAD_2998
RPOM246200 SPO_1544SPO_1545SPO_1545SPO_1211SPO_2554SPO_1544SPO_1545SPO_3778SPO_1545SPO_1544SPO_0100SPO_2554
OIHE221109 OB2450OB2449OB3067OB3068OB2451OB2450OB2449OB2452OB3069OB2449OB2450OB2451
SMED366394 SMED_0330SMED_2324SMED_5165SMED_2854SMED_0329SMED_0330SMED_0331SMED_0333SMED_5064SMED_0331SMED_0330SMED_2854SMED_0329
RLEG216596 RL0779RL4649RL4577RL0779RL0778RL0779RL0780RL0782RL0781RL0780RL0779RL0779RL0778
BMEL359391 BAB1_1599BAB2_1051BAB2_0436BAB1_1599BAB1_1599BAB1_1598BAB1_1596BAB2_1052BAB1_1598BAB1_1599BAB2_0435BAB1_1600
SMEL266834 SMC01526SMC01527SMA0106SMC03127SMC00786SMC00787SMC00788SMC00790SMA1371SMC00788SMC00787SMC00787SMC00786
BBRO257310 BB3711BB2519BB3710BB3711BB3712BB3711BB2519BB4024BB4596BB2519BB3711BB4594BB3712
HPYL85963 JHP0284JHP0284JHP0283JHP0284JHP0287JHP0284JHP0284JHP0283
BPET94624 BPET1795BPET2850BPET1796BPET1795BPET3079BPET1795BPET2850BPET0286BPET0285BPET2850BPET2851BPET0355BPET1794
MVAN350058 MVAN_3774MVAN_3775MVAN_3775MVAN_3774MVAN_3774MVAN_3775MVAN_0434MVAN_1021MVAN_3775MVAN_3774MVAN_3774
HINF281310 NTHI1357NTHI1355NTHI1355NTHI1357NTHI1401NTHI1400NTHI1399NTHI1353NTHI1354NTHI1355NTHI1357NTHI1021


Organism features enriched in list (features available for 59 out of the 64 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Endospores:No 0.002782412211
Endospores:Yes 0.00268301253
GC_Content_Range4:0-40 0.002384612213
GC_Content_Range4:60-100 0.000012429145
GC_Content_Range7:60-70 0.000026427134
Genome_Size_Range9:3-4 0.00880081477
Habitat:Specialized 0.00268301253
Optimal_temp.:- 0.009369418257
Optimal_temp.:35-37 0.0053021513
Oxygen_Req:Aerobic 0.001473329185
Oxygen_Req:Facultative 0.002547311201
Pathogenic_in:Human 0.000953311213
Pathogenic_in:No 0.000017038226



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GALACTCAT-PWY (D-galactonate degradation)104790.5261
GALACTITOLCAT-PWY (galactitol degradation)73610.4921
PWY-6196 (serine racemization)102740.4852
GLUCARDEG-PWY (D-glucarate degradation I)152940.4826
GALACTARDEG-PWY (D-galactarate degradation I)151900.4512
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)149890.4489
PWY0-823 (arginine degradation III (arginine decarboxylase/agmatinase pathway))2451190.4373
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)135820.4334
XYLCAT-PWY (xylose degradation I)2171090.4251
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951020.4248
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112720.4241
PWY-561 (superpathway of glyoxylate cycle)162890.4091
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)156860.4014



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6779   G6432   G6431   G2002   G2001   G2000   EG12628   EG12627   EG12626   EG12625   EG12076   EG10248   
G67800.9997740.9995520.9995690.999610.9997320.9995940.9993210.9993790.9997090.9998240.9994870.999723
G67790.9996950.9994570.9992070.9994220.9995510.9989790.9990590.9997230.9996260.9992860.999377
G64320.9997340.9991150.9992960.9994960.9988510.9988650.9996320.9995150.9992660.999324
G64310.9993670.999430.9993340.9987390.9986690.9994170.9996070.9995030.999413
G20020.9998390.9997430.9991040.9990060.9995260.999690.9991480.999829
G20010.9998230.999180.9990750.9996970.9997420.9994820.999732
G20000.9992060.9992790.9997970.9996710.9993490.999635
EG126280.9998440.9996010.9995750.9988150.999366
EG126270.9996420.999590.9989050.999384
EG126260.9998390.999470.999671
EG126250.9995440.999795
EG120760.99922
EG10248



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PAIRWISE BLAST SCORES:

  G6780   G6779   G6432   G6431   G2002   G2001   G2000   EG12628   EG12627   EG12626   EG12625   EG12076   EG10248   
G67800.0f0--7.4e-48------3.8e-51--
G6779-0.0f01.2e-45------1.7e-46---
G6432-5.7e-480.0f0------3.3e-52---
G64311.4e-54--0.0f0------2.2e-58--
G2002----0.0f0-------1.9e-88
G20013.6e-37--1.8e-35-0.0f0----1.7e-48--
G2000--6.5e-31---0.0f0--4.0e-47---
EG12628-------0.0f0-----
EG12627--------0.0f0----
EG12626-4.0e-478.0e-49------0.0f0---
EG126251.5e-70--9.3e-70------0.0f0--
EG12076---2.7e-57------1.4e-520.0f0-
EG10248----2.2e-94-------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- ABC-8-CPLX (dipeptide ABC transporter) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.385, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9992 EG10248 (dppA) DPPA-MONOMER (DppA)
   *in cand* 0.9997 0.9994 EG12626 (dppC) DPPC-MONOMER (DppC)
   *in cand* 0.9997 0.9995 EG12625 (dppB) DPPB-MONOMER (DppB)
   *in cand* 0.9993 0.9987 EG12628 (dppF) DPPF-MONOMER (DppF)
   *in cand* 0.9993 0.9987 EG12627 (dppD) DPPD-MONOMER (DppD)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9988 EG12076 (nikB) NIKB-MONOMER (NikB)
   *in cand* 0.9996 0.9992 G2000 (sapC) SAPC-MONOMER (SapC)
   *in cand* 0.9996 0.9991 G2001 (sapB) SAPB-MONOMER (SapB)
   *in cand* 0.9995 0.9990 G2002 (sapA) SAPA-MONOMER (SapA)
   *in cand* 0.9994 0.9987 G6431 (gsiC) YLIC-MONOMER (GsiC)
   *in cand* 0.9994 0.9989 G6432 (gsiD) YLID-MONOMER (GsiD)
   *in cand* 0.9995 0.9990 G6779 (ddpC) YDDQ-MONOMER (YddQ)
   *in cand* 0.9996 0.9993 G6780 (ddpB) YDDR-MONOMER (YddR)

- ABC-29-CPLX (peptide uptake ABC transporter) (degree of match pw to cand: 0.600, degree of match cand to pw: 0.231, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9990 G2002 (sapA) SAPA-MONOMER (SapA)
   *in cand* 0.9996 0.9992 G2000 (sapC) SAPC-MONOMER (SapC)
   *in cand* 0.9996 0.9991 G2001 (sapB) SAPB-MONOMER (SapB)
             0.9991 0.9978 EG12304 (sapD) SAPD-MONOMER (SapD)
             0.9989 0.9973 EG12305 (sapF) SAPF-MONOMER (SapF)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9992 EG10248 (dppA) DPPA-MONOMER (DppA)
   *in cand* 0.9993 0.9988 EG12076 (nikB) NIKB-MONOMER (NikB)
   *in cand* 0.9997 0.9995 EG12625 (dppB) DPPB-MONOMER (DppB)
   *in cand* 0.9997 0.9994 EG12626 (dppC) DPPC-MONOMER (DppC)
   *in cand* 0.9993 0.9987 EG12627 (dppD) DPPD-MONOMER (DppD)
   *in cand* 0.9993 0.9987 EG12628 (dppF) DPPF-MONOMER (DppF)
   *in cand* 0.9994 0.9987 G6431 (gsiC) YLIC-MONOMER (GsiC)
   *in cand* 0.9994 0.9989 G6432 (gsiD) YLID-MONOMER (GsiD)
   *in cand* 0.9995 0.9990 G6779 (ddpC) YDDQ-MONOMER (YddQ)
   *in cand* 0.9996 0.9993 G6780 (ddpB) YDDR-MONOMER (YddR)

- ABC-59-CPLX (YddO/YddP/YddQ/YddR/YddS ABC transporter) (degree of match pw to cand: 0.400, degree of match cand to pw: 0.154, average score: 0.999)
  Genes in pathway or complex:
             0.9988 0.9982 G6777 (ddpF) YDDO-MONOMER (YddO)
             0.9976 0.9943 G6778 (ddpD) YDDP-MONOMER (YddP)
             0.9980 0.9901 G6781 (ddpA) YDDS-MONOMER (YddS)
   *in cand* 0.9995 0.9990 G6779 (ddpC) YDDQ-MONOMER (YddQ)
   *in cand* 0.9996 0.9993 G6780 (ddpB) YDDR-MONOMER (YddR)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9992 EG10248 (dppA) DPPA-MONOMER (DppA)
   *in cand* 0.9993 0.9988 EG12076 (nikB) NIKB-MONOMER (NikB)
   *in cand* 0.9997 0.9995 EG12625 (dppB) DPPB-MONOMER (DppB)
   *in cand* 0.9997 0.9994 EG12626 (dppC) DPPC-MONOMER (DppC)
   *in cand* 0.9993 0.9987 EG12627 (dppD) DPPD-MONOMER (DppD)
   *in cand* 0.9993 0.9987 EG12628 (dppF) DPPF-MONOMER (DppF)
   *in cand* 0.9996 0.9992 G2000 (sapC) SAPC-MONOMER (SapC)
   *in cand* 0.9996 0.9991 G2001 (sapB) SAPB-MONOMER (SapB)
   *in cand* 0.9995 0.9990 G2002 (sapA) SAPA-MONOMER (SapA)
   *in cand* 0.9994 0.9987 G6431 (gsiC) YLIC-MONOMER (GsiC)
   *in cand* 0.9994 0.9989 G6432 (gsiD) YLID-MONOMER (GsiD)

- ABC-49-CPLX (gsiABCD glutathione ABC transporter) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.154, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9994 0.9987 G6431 (gsiC) YLIC-MONOMER (GsiC)
   *in cand* 0.9994 0.9989 G6432 (gsiD) YLID-MONOMER (GsiD)
             0.9993 0.9984 G6430 (gsiB) YLIB-MONOMER (GsiB)
             0.9469 0.8102 G6429 (gsiA) YLIA-MONOMER (GsiA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9992 EG10248 (dppA) DPPA-MONOMER (DppA)
   *in cand* 0.9993 0.9988 EG12076 (nikB) NIKB-MONOMER (NikB)
   *in cand* 0.9997 0.9995 EG12625 (dppB) DPPB-MONOMER (DppB)
   *in cand* 0.9997 0.9994 EG12626 (dppC) DPPC-MONOMER (DppC)
   *in cand* 0.9993 0.9987 EG12627 (dppD) DPPD-MONOMER (DppD)
   *in cand* 0.9993 0.9987 EG12628 (dppF) DPPF-MONOMER (DppF)
   *in cand* 0.9996 0.9992 G2000 (sapC) SAPC-MONOMER (SapC)
   *in cand* 0.9996 0.9991 G2001 (sapB) SAPB-MONOMER (SapB)
   *in cand* 0.9995 0.9990 G2002 (sapA) SAPA-MONOMER (SapA)
   *in cand* 0.9995 0.9990 G6779 (ddpC) YDDQ-MONOMER (YddQ)
   *in cand* 0.9996 0.9993 G6780 (ddpB) YDDR-MONOMER (YddR)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10248 EG12625 EG12626 EG12627 EG12628 (centered at EG12626)
G2000 G2001 G2002 (centered at G2001)
EG12076 (centered at EG12076)
G6779 G6780 (centered at G6780)
G6431 G6432 (centered at G6432)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6780   G6779   G6432   G6431   G2002   G2001   G2000   EG12628   EG12627   EG12626   EG12625   EG12076   EG10248   
219/623202/623219/623214/623200/623221/623214/623244/623236/623221/623206/623199/623204/623
AAVE397945:0:Tyes711712712711710711-210711711710
ABAC204669:0:Tyes2153002153-2153----21532153-
ABAU360910:0:Tyes161647162161160161647180606476462213160
ACAU438753:0:Tyes746224622462247-1012541255224622472247-
AFER243159:0:Tyes--------0----
AFUL224325:0:Tyes01------2-0--
AHYD196024:0:Tyes----21071415140--2
AMAR329726:9:Tyes0------------
AMET293826:0:Tyes10181017101710181019101812610151820101828371019
AORE350688:0:Tyes45543-5105443
APER272557:0:Tyes01157-205620550-11631346-2056-2055
APLE416269:0:Tyes122107317304321-1987
APLE434271:0:Tno122107047034321-769
ASAL382245:5:Tyes----1486148714887820102--1486
ASP232721:2:Tyes--201----210-202-
ASP76114:2:Tyes--------0----
AVAR240292:3:Tyes1517-----0------
BABO262698:0:Tno-5621-----563--0-
BABO262698:1:Tno3--3-320-23--
BAMB339670:2:Tno-6021571560-------0
BAMB339670:3:Tno3----3201233-
BAMB398577:2:Tno-5481301290-------0
BAMB398577:3:Tno3----3201233-
BAMY326423:0:Tyes-4-32--1043--
BANT260799:0:Tno2112--1431220
BANT261594:2:Tno21120-1431220
BANT568206:2:Tyes2112--1431220
BANT592021:2:Tno21120-1431220
BBAC264462:0:Tyes-------10----
BBAC360095:0:Tyes100---0--0---
BBRO257310:0:Tyes1200011991200120112000151820990120020971201
BCAN483179:0:Tno-2840-----285--1-
BCAN483179:1:Tno3--3-320-23--
BCEN331271:1:Tno-0421422569--------
BCEN331271:2:Tno3----32012334
BCEN331272:2:Tyes-5751491480--------
BCEN331272:3:Tyes3----32012334
BCER226900:1:Tyes-------0652--650-
BCER288681:0:Tno2112--1431220
BCER315749:1:Tyes-------0644----
BCER405917:1:Tyes-------0999--717-
BCER572264:1:Tno-------0859--589-
BCLA66692:0:Tyes1247124805581246558124856136941248124712471246
BHAL272558:0:Tyes37083707103709370837073710356370737085903709
BHEN283166:0:Tyes100---0--0---
BJAP224911:0:Fyes46236303926-4618903702368189023662366-
BLIC279010:0:Tyes344323432904318602
BLON206672:0:Tyes-----0-------
BMAL243160:0:Tno-28910--289--289---
BMAL243160:1:Tno1---01-32-110
BMAL320388:0:Tno-0148149--0--0---
BMAL320388:1:Tno1---01-43-110
BMAL320389:0:Tyes-0305306--0--0---
BMAL320389:1:Tyes3---43-01-334
BMEL224914:0:Tno--------0--288-
BMEL224914:1:Tno23320235-32-0
BMEL359391:0:Tno-5621-----563--0-
BMEL359391:1:Tno3--3-320-23-4
BOVI236:0:Tyes--3420------516343-
BOVI236:1:Tyes-1--2-1-01--2
BPAR257311:0:Tno1709017081709171017090203625580170925561710
BPER257313:0:Tyes100121195--018282
BPET94624:0:Tyes15252586152615252816152525861025862587701524
BPSE272560:0:Tyes-0346347---------
BPSE272560:1:Tyes1---012432110
BPSE320372:0:Tno-260701---------
BPSE320372:1:Tno1---012432110
BPSE320373:0:Tno-0456457---------
BPSE320373:1:Tno1---012432110
BPUM315750:0:Tyes12210122602592122680
BQUI283165:0:Tyes100---0--01--
BSP36773:1:Tyes-0614615816-------816
BSP36773:2:Tyes3----3201233-
BSP376:0:Tyes4829557111115432012311154
BSUB:0:Tyes---2---1032--
BSUI204722:0:Tyes-2790-----280--1-
BSUI204722:1:Tyes3--3-320-23--
BSUI470137:0:Tno--0-----281--1-
BSUI470137:1:Tno21-2-210-12--
BTHA271848:0:Tno-33010---------
BTHA271848:1:Tno1---012432110
BTHU281309:1:Tno2112--1431220
BTHU412694:1:Tno-------0826--609-
BTRI382640:1:Tyes100---0--0---
BVIE269482:6:Tyes-38910---------
BVIE269482:7:Tyes3---432012334
BWEI315730:4:Tyes659------0936--659-
BXEN266265:0:Tyes100---0--01--
BXEN266265:1:Tyes----0--------
CACE272562:1:Tyes---3489---34810----
CBEI290402:0:Tyes---9481--945946-0-1
CBOT36826:1:Tno0-1903--0-----0-
CBOT441770:0:Tyes0-1888--0-----0-
CBOT441771:0:Tno0-1747--0-----0-
CBOT441772:1:Tno0-1853--0-1851---0-
CBOT498213:1:Tno0-1932--0-----0-
CBOT508765:1:Tyes--23---0-----
CBOT515621:2:Tyes0-2109--0-----0-
CBOT536232:0:Tno0-2108--0-----0-
CCHL340177:0:Tyes--0-----729----
CCUR360105:0:Tyes-----------0-
CDES477974:0:Tyes0110156901321001569
CDIF272563:1:Tyes-------01----
CDIP257309:0:Tyes-----------0-
CHYD246194:0:Tyes344-234104332
CKLU431943:1:Tyes2612622622612602610--262261-260
CKOR374847:0:Tyes4134144144130413---414413-412
CNOV386415:0:Tyes--0-----1----
CPER195102:1:Tyes----4--0-----
CPER195103:0:Tno----4--0-----
CPER289380:3:Tyes----4--0-----
CPHY357809:0:Tyes-------01167----
CPSY167879:0:Tyes---1012--21-0
CSAL290398:0:Tyes---01-------1
CSP501479:2:Fyes-----------0-
CSP501479:4:Fyes---120--1190--120--
CSP501479:7:Fyes--142-0-------0
CSP501479:8:Fyes01---0---1---
CTEP194439:0:Tyes--697-----0697---
CTET212717:0:Tyes------0----23-
CVIO243365:0:Tyes1221012432110
DARO159087:0:Tyes--------0----
DDES207559:0:Tyes322-432012334
DGEO319795:1:Tyes8580-85885785885910061007-858858857
DHAF138119:0:Tyes1221012433896110
DOLE96561:0:Tyes--------0----
DPSY177439:2:Tyes--------0----
DRAD243230:3:Tyes100132710596597011327
DRED349161:0:Tyes0120652066206720662065206320642065206620662067
DSHI398580:3:Tyes--0----------
DSHI398580:5:Tyes-----------0-
DSP216389:0:Tyes--23---0---3-
DSP255470:0:Tno--23---0---3-
DVUL882:1:Tyes--2283---2283023972283---
ECAR218491:0:Tyes213921388578582102463246424652466-2467
ECOL199310:0:Tno3374408510829828827337133723373337432863377
ECOL316407:0:Tno66966810473472471290829072906290529722904
ECOL331111:6:Tno74474310576575574301330143015301629423018
ECOL362663:0:Tno2797345810506505504279427952796279727252799
ECOL364106:1:Tno3236381810737736735323332343235323631493237
ECOL405955:2:Tyes2868342010554553552286528662867286827942869
ECOL409438:6:Tyes69269110462461460297129722973297429032975
ECOL413997:0:Tno64164010471470469260326042605260625402607
ECOL439855:4:Tno80981010950951952291629172918291928182921
ECOL469008:0:Tno19631964259025912124212521264321720
ECOL481805:0:Tno20052006264526462161216221634321650
ECOL585034:0:Tno61961810448447446278627872788278927172791
ECOL585035:0:Tno2999358110570569568299629972998299929203000
ECOL585055:0:Tno74474310586585584307430753076307729793079
ECOL585056:2:Tno72272110582581580302730283029303029423032
ECOL585057:0:Tno95395210849848847324232433244324531553246
ECOL585397:0:Tno3327390910695694693332433253326332732593328
ECOL83334:0:Tno1197119610976975974358735883589359035113591
ECOLI:0:Tno67967810478477476276827692770277127032772
ECOO157:0:Tno1091109210132013211322361236133614361535323616
EFER585054:1:Tyes2556255510678679680255325542555255602557
ESP42895:1:Tyes930254311641163200920102011321016771945
FALN326424:0:Tyes-------01----
FNOD381764:0:Tyes-------13990----
FNUC190304:0:Tyes1221012-32-10
FSP1855:0:Tyes--------0----
GBET391165:0:Tyes---01--------
GKAU235909:1:Tyes-00367--0--0---
GMET269799:1:Tyes-386386---38601386-385384
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SCO:2:Fyes---2436-2436-102437-2436-
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YPSE349747:2:Tno226417522263-2102261226222632264-2265



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