CANDIDATE ID: 81

CANDIDATE ID: 81

NUMBER OF GENES: 11
AVERAGE SCORE:    9.9922295e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    0.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7769 (insH-11) (b3505)
   Products of gene:
     - G7769-MONOMER (IS5 transposase and trans-activator)

- G7672 (insH-10) (b3218)
   Products of gene:
     - G7769-MONOMER (IS5 transposase and trans-activator)

- G7548 (insH-9) (b2982)
   Products of gene:
     - G7769-MONOMER (IS5 transposase and trans-activator)

- G7150 (insH-8) (b2192)
   Products of gene:
     - G7769-MONOMER (IS5 transposase and trans-activator)

- G7092 (insH-7) (b2030)
   Products of gene:
     - G7769-MONOMER (IS5 transposase and trans-activator)

- G7074 (insH-6) (b1994)
   Products of gene:
     - G7074-MONOMER (IS5 transposase and trans-activator)

- G6693 (insH-5) (b1370)
   Products of gene:
     - G6693-MONOMER (IS5 transposase and trans-activator)

- G6667 (insH-4) (b1331)
   Products of gene:
     - G7769-MONOMER (IS5 transposase and trans-activator)

- G6360 (insH-3) (b0656)
   Products of gene:
     - G7769-MONOMER (IS5 transposase and trans-activator)

- G6308 (insH-2) (b0552)
   Products of gene:
     - G7769-MONOMER (IS5 transposase and trans-activator)

- G6134 (insH-1) (b0259)
   Products of gene:
     - G7769-MONOMER (IS5 transposase and trans-activator)



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ORGANISMS CONTAINING AT LEAST 9 GENES FROM THE GROUP:

Total number of orgs: 49
Effective number of orgs (counting one per cluster within 468 clusters): 35

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A11
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 31101811
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC1033111
XCAM487884 Xanthomonas campestris pv. paulliniae11
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-1011
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 800411
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 3391311
VVUL196600 ncbi Vibrio vulnificus YJ01611
VEIS391735 ncbi Verminephrobacter eiseniae EF01-211
VCHO345073 ncbi Vibrio cholerae O39511
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N1696111
SSP94122 ncbi Shewanella sp. ANA-311
SLOI323850 ncbi Shewanella loihica PV-411
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47611
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 832511
RSOL267608 ncbi Ralstonia solanacearum GMI100011
RPAL316055 ncbi Rhodopseudomonas palustris BisA5311
RFER338969 ncbi Rhodoferax ferrireducens T11811
REUT381666 ncbi Ralstonia eutropha H1611
RALB246199 Ruminococcus albus 811
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC300011
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a11
PSTU379731 ncbi Pseudomonas stutzeri A150111
PSP296591 ncbi Polaromonas sp. JS66611
PPUT76869 ncbi Pseudomonas putida GB-111
PPUT351746 ncbi Pseudomonas putida F111
PPUT160488 ncbi Pseudomonas putida KT244011
PNAP365044 ncbi Polaromonas naphthalenivorans CJ211
NHAM323097 ncbi Nitrobacter hamburgensis X1411
MPET420662 ncbi Methylibium petroleiphilum PM111
MCAP243233 ncbi Methylococcus capsulatus Bath11
MAQU351348 ncbi Marinobacter aquaeolei VT811
ECOL585397 ncbi Escherichia coli ED1a11
ECOL585056 ncbi Escherichia coli UMN02611
ECOL481805 ncbi Escherichia coli ATCC 873911
ECOL469008 ncbi Escherichia coli BL21(DE3)11
ECOL439855 ncbi Escherichia coli SMS-3-511
ECOL409438 ncbi Escherichia coli SE1111
ECOL405955 ncbi Escherichia coli APEC O111
ECOL316407 ncbi Escherichia coli K-12 substr. W311011
BVIE269482 ncbi Burkholderia vietnamiensis G411
BTHA271848 ncbi Burkholderia thailandensis E26411
BPET94624 Bordetella petrii11
BAMB339670 ncbi Burkholderia ambifaria AMMD11
ASP76114 ncbi Aromatoleum aromaticum EbN111
ASP232721 ncbi Acidovorax sp. JS4211
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 2327011
AAVE397945 ncbi Acidovorax citrulli AAC00-111
AAUR290340 ncbi Arthrobacter aurescens TC111


Names of the homologs of the genes in the group in each of these orgs
  G7769   G7672   G7548   G7150   G7092   G7074   G6693   G6667   G6360   G6308   G6134   
XORY360094 XOOORF_4135XOOORF_4135XOOORF_4135XOOORF_4135XOOORF_4135XOOORF_4135XOOORF_4135XOOORF_4135XOOORF_4135XOOORF_4135XOOORF_4135
XORY342109 XOO0108XOO0108XOO0108XOO0108XOO0108XOO0108XOO0108XOO0108XOO0108XOO0108XOO0108
XORY291331 XOO3089XOO3089XOO3089XOO3089XOO3089XOO3089XOO3089XOO3089XOO3089XOO3089XOO3089
XCAM487884 XCC-B100_1774XCC-B100_1774XCC-B100_1774XCC-B100_1774XCC-B100_1774XCC-B100_1774XCC-B100_1774XCC-B100_1774XCC-B100_1774XCC-B100_1774XCC-B100_1774
XCAM316273 XCAORF_2686XCAORF_2686XCAORF_2686XCAORF_2686XCAORF_2686XCAORF_2686XCAORF_2686XCAORF_2686XCAORF_2686XCAORF_2686XCAORF_2686
XCAM314565 XC_2012XC_2012XC_2012XC_2012XC_2012XC_2012XC_2012XC_2012XC_2012XC_2012XC_2012
XCAM190485 XCC1248XCC1248XCC1248XCC1248XCC1248XCC1248XCC1248XCC1248XCC1248XCC1248XCC1248
VVUL196600 VV0531VV0531VV0531VV0531VV0531VV0531VV0531VV0531VV0531VV0531VV0531
VEIS391735 VEIS_1283VEIS_1283VEIS_1283VEIS_1283VEIS_1283VEIS_1283VEIS_1283VEIS_1283VEIS_1283VEIS_1283VEIS_1283
VCHO345073 VC0395_0947VC0395_0947VC0395_0947VC0395_0947VC0395_0947VC0395_0947VC0395_0947VC0395_0947VC0395_0947VC0395_0947VC0395_0947
VCHO VCA0472VCA0472VCA0472VCA0472VCA0472VCA0472VCA0472VCA0472VCA0472VCA0472VCA0472
SSP94122 SHEWANA3_4142SHEWANA3_4142SHEWANA3_4142SHEWANA3_4142SHEWANA3_4142SHEWANA3_4142SHEWANA3_4142SHEWANA3_4142SHEWANA3_4142SHEWANA3_4142SHEWANA3_4142
SLOI323850 SHEW_3838SHEW_3838SHEW_3838SHEW_3838SHEW_3838SHEW_3838SHEW_3838SHEW_3838SHEW_3838SHEW_3838SHEW_3838
SENT454169 SEHA_C0023SEHA_C0023SEHA_C0023SEHA_C0023SEHA_C0023SEHA_C0023SEHA_C0023SEHA_C0023SEHA_C0023SEHA_C0023SEHA_C0023
SAUR93061 SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778
RSOL267608 RSC1704RSC1704RSC1704RSC1704RSC1704RSC1704RSC1704RSC1704RSC1704RSC1704RSC1704
RPAL316055 RPE_3042RPE_3042RPE_3042RPE_3042RPE_3042RPE_3042RPE_3042RPE_3042RPE_3042RPE_3042RPE_3042
RFER338969 RFER_0942RFER_0942RFER_0942RFER_0942RFER_0942RFER_0942RFER_0942RFER_0942RFER_0942RFER_0942RFER_0942
REUT381666 PHG062PHG062PHG062PHG062PHG062PHG062PHG062PHG062PHG062PHG062PHG062
RALB246199 GRAORF_4090GRAORF_4090GRAORF_4090GRAORF_4090GRAORF_4090GRAORF_4090GRAORF_4090GRAORF_4090GRAORF_4090GRAORF_4090GRAORF_4090
PSYR223283 PSPTO_3208PSPTO_3208PSPTO_3208PSPTO_3208PSPTO_3208PSPTO_2887PSPTO_2887PSPTO_3208PSPTO_3208PSPTO_3208PSPTO_3208
PSYR205918 PSYR_0096PSYR_0096PSYR_0096PSYR_0096PSYR_0096PSYR_0096PSYR_0096PSYR_0096PSYR_0096PSYR_0096PSYR_0096
PSTU379731 PST_1164PST_1164PST_1164PST_1164PST_1164PST_1164PST_1164PST_1164PST_1164PST_1164PST_1164
PSP296591 BPRO_5532BPRO_5532BPRO_5532BPRO_5532BPRO_5532BPRO_5532BPRO_5532BPRO_5532BPRO_5532BPRO_5532BPRO_5532
PPUT76869 PPUTGB1_4823PPUTGB1_4823PPUTGB1_4823PPUTGB1_4823PPUTGB1_4823PPUTGB1_4823PPUTGB1_4823PPUTGB1_4823PPUTGB1_4823PPUTGB1_4823PPUTGB1_4823
PPUT351746 PPUT_1356PPUT_1356PPUT_1356PPUT_1356PPUT_1356PPUT_1356PPUT_1356PPUT_1356PPUT_1356PPUT_1356PPUT_1356
PPUT160488 PP_3793PP_3793PP_3793PP_3793PP_3793PP_3793PP_3793PP_3793PP_3793PP_3793PP_3793
PNAP365044 PNAP_4648PNAP_4648PNAP_4648PNAP_4648PNAP_4648PNAP_4648PNAP_4648PNAP_4648PNAP_4648PNAP_4648PNAP_4648
NHAM323097 NHAM_3889NHAM_3889NHAM_3889NHAM_3889NHAM_3889NHAM_3889NHAM_3889NHAM_3889NHAM_3889NHAM_3889NHAM_3889
MPET420662 MPE_B0605MPE_B0605MPE_B0605MPE_B0605MPE_B0605MPE_B0605MPE_B0605MPE_B0605MPE_B0605MPE_B0605MPE_B0605
MCAP243233 MCA_0887MCA_0887MCA_0887MCA_0887MCA_0887MCA_0887MCA_0887MCA_0887MCA_0887MCA_0887MCA_0887
MAQU351348 MAQU_4027MAQU_4027MAQU_4027MAQU_4027MAQU_4027MAQU_3832MAQU_3832MAQU_4027MAQU_4027MAQU_4027MAQU_4027
ECOL585397 ECED1_5129ECED1_5129ECED1_5129ECED1_5129ECED1_5129ECED1_5129ECED1_5129ECED1_5129ECED1_5129ECED1_5129ECED1_5129
ECOL585056 ECUMN_2980ECUMN_2980ECUMN_2980ECUMN_2980ECUMN_2980ECUMN_2980ECUMN_2980ECUMN_2980ECUMN_2980ECUMN_2980ECUMN_2980
ECOL481805 ECOLC_3892ECOLC_3892ECOLC_3892ECOLC_3892ECOLC_3892ECOLC_3892ECOLC_3892ECOLC_3892ECOLC_3892ECOLC_3892ECOLC_3892
ECOL469008 ECBD_0756ECBD_0756ECBD_0756ECBD_0756ECBD_0756ECBD_0756ECBD_0756ECBD_0756ECBD_0756ECBD_0756ECBD_0756
ECOL439855 ECSMS35_0642ECSMS35_0642ECSMS35_0642ECSMS35_0642ECSMS35_0642ECSMS35_0642ECSMS35_0642ECSMS35_0642ECSMS35_0642ECSMS35_0642ECSMS35_0642
ECOL409438 ECSE_2079ECSE_2079ECSE_2079ECSE_2079ECSE_2079ECSE_2079ECSE_2079ECSE_2079ECSE_2079ECSE_2079ECSE_2079
ECOL405955 APECO1_O1R21APECO1_O1R21APECO1_O1R21APECO1_O1R21APECO1_O1R21APECO1_O1R21APECO1_O1R21APECO1_O1R21APECO1_O1R21APECO1_O1R21APECO1_O1R21
ECOL316407 ECK0261:JW0250:B0259ECK0261:JW0250:B0259ECK0261:JW0250:B0259ECK0261:JW0250:B0259ECK0261:JW0250:B0259ECK0261:JW0250:B0259ECK0261:JW0250:B0259ECK0261:JW0250:B0259ECK0261:JW0250:B0259ECK0261:JW0250:B0259ECK0261:JW0250:B0259
BVIE269482 BCEP1808_2049BCEP1808_2049BCEP1808_2049BCEP1808_2049BCEP1808_2049BCEP1808_2049BCEP1808_2049BCEP1808_2049BCEP1808_2049BCEP1808_2049BCEP1808_2049
BTHA271848 BTH_I2350BTH_I2350BTH_I2350BTH_I2350BTH_I2350BTH_I2350BTH_I2350BTH_I2350BTH_I2350BTH_I2350BTH_I2350
BPET94624 BPET4179BPET4179BPET4179BPET4179BPET4179BPET4179BPET4179BPET4179BPET4179BPET4179BPET4179
BAMB339670 BAMB_2016BAMB_2016BAMB_2016BAMB_2016BAMB_2016BAMB_2016BAMB_2016BAMB_2016BAMB_2016BAMB_2016BAMB_2016
ASP76114 C1A74C1A74C1A74C1A74C1A74C1A74C1A74C1A74C1A74C1A74C1A74
ASP232721 AJS_2927AJS_2927AJS_2927AJS_2927AJS_2927AJS_2927AJS_2927AJS_2927AJS_2927AJS_2927AJS_2927
AFER243159 AFE_3147AFE_3147AFE_3147AFE_3147AFE_3147AFE_3147AFE_3147AFE_3147AFE_3147AFE_3147AFE_3147
AAVE397945 AAVE_3460AAVE_3460AAVE_3460AAVE_3460AAVE_3460AAVE_3460AAVE_3460AAVE_3460AAVE_3460AAVE_3460AAVE_3460
AAUR290340 AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211


Organism features enriched in list (features available for 46 out of the 49 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Cholera 0.006100722
Disease:Plant_rot 0.000462033
Disease:Rice_bacterial_blight_disease 0.000462033
GC_Content_Range4:0-40 8.312e-91213
GC_Content_Range4:60-100 1.311e-626145
GC_Content_Range7:30-40 1.951e-61166
GC_Content_Range7:50-60 0.007019115107
GC_Content_Range7:60-70 2.269e-726134
Genome_Size_Range5:2-4 6.265e-63197
Genome_Size_Range5:4-6 1.032e-1035184
Genome_Size_Range9:2-3 0.00128782120
Genome_Size_Range9:3-4 0.0085384177
Genome_Size_Range9:4-5 0.00086881696
Genome_Size_Range9:5-6 4.628e-61988
Gram_Stain:Gram_Neg 1.496e-843333
Gram_Stain:Gram_Pos 0.00009092150
Habitat:Multiple 0.009914221178
Motility:No 0.00046493151
Motility:Yes 5.070e-737267
Oxygen_Req:Facultative 0.004587624201
Pathogenic_in:Human 0.00196818213
Pathogenic_in:Plant 0.0004599615
Pathogenic_in:Rice 0.000462033
Shape:Rod 0.000022440347
Temp._range:Mesophilic 0.002899144473



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ORGANISMS CONTAINING AT MOST 2 GENES FROM THE GROUP:

Total number of orgs: 573
Effective number of orgs (counting one per cluster within 468 clusters): 439

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317580
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329530
YPES386656 ncbi Yersinia pestis Pestoides F0
YPES377628 ncbi Yersinia pestis Nepal5160
YPES360102 ncbi Yersinia pestis Antiqua0
YPES349746 ncbi Yersinia pestis Angola0
YPES214092 ncbi Yersinia pestis CO920
YPES187410 ncbi Yersinia pestis KIM 100
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80810
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
XAUT78245 ncbi Xanthobacter autotrophicus Py20
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VVUL216895 ncbi Vibrio vulnificus CMCP60
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106330
VFIS312309 ncbi Vibrio fischeri ES1140
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT20
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP292414 ncbi Ruegeria sp. TM10400
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSON300269 ncbi Shigella sonnei Ss0460
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPRO399741 ncbi Serratia proteamaculans 5680
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SPEA398579 ncbi Shewanella pealeana ATCC 7003450
SONE211586 ncbi Shewanella oneidensis MR-10
SMUT210007 ncbi Streptococcus mutans UA1590
SMEL266834 ncbi Sinorhizobium meliloti 10210
SMED366394 ncbi Sinorhizobium medicae WSM4190
SMAR399550 ncbi Staphylothermus marinus F10
SLAC55218 Ruegeria lacuscaerulensis0
SHIGELLA ncbi Shigella flexneri 2a str. 2457T0
SHAL458817 ncbi Shewanella halifaxensis HAW-EB40
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SGLO343509 ncbi Sodalis glossinidius morsitans0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SFLE373384 ncbi Shigella flexneri 5 str. 84010
SFLE198214 ncbi Shigella flexneri 2a str. 3010
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B670
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91500
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT180
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty20
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDYS300267 ncbi Shigella dysenteriae Sd1970
SDEN318161 ncbi Shewanella denitrificans OS2170
SDEG203122 ncbi Saccharophagus degradans 2-400
SCO ncbi Streptomyces coelicolor A3(2)0
SBOY300268 ncbi Shigella boydii Sb2270
SBAL402882 ncbi Shewanella baltica OS1850
SBAL399599 ncbi Shewanella baltica OS1950
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170250
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170290
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.10
RSP357808 ncbi Roseiflexus sp. RS-10
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111700
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316056 ncbi Rhodopseudomonas palustris BisB180
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMET266264 ncbi Ralstonia metallidurans CH340
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38410
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT264198 ncbi Ralstonia eutropha JMP1340
RETL347834 ncbi Rhizobium etli CFN 420
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPRO298386 ncbi Photobacterium profundum SS90
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ950
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO10
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 370
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PFLU220664 ncbi Pseudomonas fluorescens Pf-50
PFLU216595 ncbi Pseudomonas fluorescens SBW250
PFLU205922 ncbi Pseudomonas fluorescens Pf0-10
PENT384676 ncbi Pseudomonas entomophila L480
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER208964 ncbi Pseudomonas aeruginosa PAO10
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8310
OCAR504832 ncbi Oligotropha carboxidovorans OM50
OANT439375 ncbi Ochrobactrum anthropi ATCC 491880
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSP400668 ncbi Marinomonas sp. MWYL10
MSP266779 ncbi Chelativorans sp. BNC10
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLOT266835 ncbi Mesorhizobium loti MAFF3030990
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785780
JSP375286 ncbi Janthinobacterium sp. Marseille0
JSP290400 ncbi Jannaschia sp. CCS10
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HCHE349521 ncbi Hahella chejuensis KCTC 23960
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GURA351605 ncbi Geobacter uraniireducens Rf40
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-20
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GKAU235909 ncbi Geobacillus kaustophilus HTA4260
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ESP42895 Enterobacter sp.0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFER585054 ncbi Escherichia fergusonii ATCC 354690
EFAE226185 ncbi Enterococcus faecalis V5830
ECOO157 ncbi Escherichia coli O157:H7 EDL9330
ECOL83334 Escherichia coli O157:H70
ECOL585057 ncbi Escherichia coli IAI390
ECOL585055 ncbi Escherichia coli 559890
ECOL585035 ncbi Escherichia coli S880
ECOL585034 ncbi Escherichia coli IAI10
ECOL413997 ncbi Escherichia coli B str. REL6060
ECOL364106 ncbi Escherichia coli UTI890
ECOL362663 ncbi Escherichia coli 5360
ECOL331111 ncbi Escherichia coli E24377A0
ECOL199310 ncbi Escherichia coli CFT0730
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10430
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DRED349161 ncbi Desulfotomaculum reducens MI-10
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVIO243365 ncbi Chromobacterium violaceum ATCC 124720
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CSP501479 Citreicella sp. SE450
CSAL290398 ncbi Chromohalobacter salexigens DSM 30430
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CJAP155077 Cellvibrio japonicus0
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80520
CAULO ncbi Caulobacter crescentus CB150
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BWEI315730 ncbi Bacillus weihenstephanensis KBAB40
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHU412694 ncbi Bacillus thuringiensis Al Hakam0
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-270
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSUB ncbi Bacillus subtilis subtilis 1680
BSP376 Bradyrhizobium sp.0
BSP36773 Burkholderia sp.0
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BPSE320373 ncbi Burkholderia pseudomallei 6680
BPSE320372 ncbi Burkholderia pseudomallei 1710b0
BPSE272560 ncbi Burkholderia pseudomallei K962430
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BMAL320389 ncbi Burkholderia mallei NCTC 102470
BMAL320388 ncbi Burkholderia mallei SAVP10
BMAL243160 ncbi Burkholderia mallei ATCC 233440
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145800
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1100
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BHAL272558 ncbi Bacillus halodurans C-1250
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1020
BCER405917 Bacillus cereus W0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-980
BCER288681 ncbi Bacillus cereus E33L0
BCER226900 ncbi Bacillus cereus ATCC 145790
BCEN331272 ncbi Burkholderia cenocepacia HI24240
BCEN331271 ncbi Burkholderia cenocepacia AU 10540
BCAN483179 ncbi Brucella canis ATCC 233650
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02480
BANT568206 ncbi Bacillus anthracis CDC 6840
BANT261594 ncbi Bacillus anthracis Ames Ancestor0
BANT260799 ncbi Bacillus anthracis Sterne0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAMB398577 ncbi Burkholderia ambifaria MC40-60
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP1667 Arthrobacter sp.0
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4490
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG10
AMET293826 ncbi Alkaliphilus metalliredigens QYMF0
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AHYD196024 Aeromonas hydrophila dhakensis0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N0
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7769   G7672   G7548   G7150   G7092   G7074   G6693   G6667   G6360   G6308   G6134   
ZMOB264203
YPSE349747
YPSE273123
YPES386656
YPES377628
YPES360102
YPES349746
YPES214092
YPES187410
YENT393305
XFAS405440
XFAS183190
XFAS160492
XAXO190486
XAUT78245
WSUC273121
WPIP955
WPIP80849
VVUL216895
VPAR223926
VFIS312309
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTUR377629
TTHE300852
TTHE262724
TTEN273068
TSP28240
TSP1755
TROS309801
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TFUS269800
TERY203124
TELO197221
TDEN326298
TDEN292415
TDEN243275
TCRU317025
TACI273075
SWOL335541
STYP99287
STRO369723
STOK273063
STHE322159
STHE299768
STHE292459
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP644076
SSP387093
SSP321332
SSP321327
SSP292414
SSP1148
SSP1131
SSON300269
SSOL273057
SSED425104
SSAP342451
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPRO399741
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SPEA398579
SONE211586
SMUT210007
SMEL266834
SMED366394
SMAR399550
SLAC55218
SHIGELLA
SHAL458817
SHAE279808
SGOR29390
SGLO343509
SFUM335543
SFLE373384
SFLE198214
SERY405948
SEPI176280
SEPI176279
SENT321314
SENT295319
SENT220341
SENT209261
SELO269084
SDYS300267
SDEN318161
SDEG203122
SCO
SBOY300268
SBAL402882
SBAL399599
SAVE227882
SAUR93062
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SALA317655
SAGA211110
SAGA208435
SAGA205921
SACI56780
SACI330779
RXYL266117
RTYP257363
RSPH349102
RSPH349101
RSPH272943
RSP357808
RSP101510
RSAL288705
RRUB269796
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057
RPAL316056
RPAL258594
RMET266264
RMAS416276
RLEG216596
RFEL315456
REUT264198
RETL347834
RDEN375451
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PTOR263820
PTHE370438
PSP56811
PSP312153
PSP117
PRUM264731
PPRO298386
PPEN278197
PMUL272843
PMOB403833
PMEN399739
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PLUM243265
PISL384616
PINT246198
PING357804
PHOR70601
PHAL326442
PGIN242619
PFUR186497
PFLU220664
PFLU216595
PFLU205922
PENT384676
PDIS435591
PCRY335284
PCAR338963
PATL342610
PAST100379
PARS340102
PARC259536
PAER208964
PAER208963
PAER178306
PACN267747
PABY272844
OTSU357244
OIHE221109
OCAR504832
OANT439375
NWIN323098
NSP387092
NSP35761
NSP103690
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NGON242231
NFAR247156
NEUT335283
NEUR228410
NARO279238
MXAN246197
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE264732
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSUC221988
MSTA339860
MSP409
MSP400668
MSP266779
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLOT266835
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAER449447
MAEO419665
MACE188937
MABS561007
LXYL281090
LWEL386043
LSPH444177
LSAK314315
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668
LMON265669
LMON169963
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINT267671
LINT189518
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCHO395495
LCAS321967
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
KRAD266940
KPNE272620
JSP375286
JSP290400
ILOI283942
IHOS453591
HWAL362976
HSP64091
HSOM228400
HSOM205914
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HMOD498761
HMAR272569
HINF71421
HINF374930
HINF281310
HHEP235279
HHAL349124
HDUC233412
HCHE349521
HBUT415426
HAUR316274
HARS204773
HACI382638
GVIO251221
GURA351605
GTHE420246
GSUL243231
GOXY290633
GMET269799
GKAU235909
GFOR411154
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855
FSP106370
FRANT
FPHI484022
FNUC190304
FNOD381764
FMAG334413
FJOH376686
FALN326424
ESP42895
ERUM302409
ERUM254945
ELIT314225
EFER585054
EFAE226185
ECOO157
ECOL83334
ECOL585057
ECOL585055
ECOL585035
ECOL585034
ECOL413997
ECOL364106
ECOL362663
ECOL331111
ECOL199310
ECHA205920
ECAR218491
ECAN269484
DVUL882
DSP255470
DSP216389
DSHI398580
DRED349161
DRAD243230
DPSY177439
DOLE96561
DNOD246195
DHAF138119
DGEO319795
DETH243164
DDES207559
DARO159087
CVIO243365
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439
CSUL444179
CSP78
CSP501479
CSAL290398
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPER289380
CPER195103
CPER195102
CPEL335992
CNOV386415
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CJAP155077
CHYD246194
CHUT269798
CHOM360107
CGLU196627
CFET360106
CFEL264202
CEFF196164
CDIP257309
CDIF272563
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT536232
CBOT515621
CBOT508765
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBLO291272
CBLO203907
CBEI290402
CAULO
CACE272562
CABO218497
BXEN266265
BWEI315730
BTUR314724
BTRI382640
BTHU412694
BTHU281309
BTHE226186
BSUI470137
BSUI204722
BSUB
BSP376
BSP36773
BSP107806
BQUI283165
BPUM315750
BPSE320373
BPSE320372
BPSE272560
BPER257313
BPAR257311
BOVI236
BMEL359391
BMEL224914
BMAL320389
BMAL320388
BMAL243160
BLON206672
BLIC279010
BJAP224911
BHER314723
BHEN283166
BHAL272558
BGAR290434
BFRA295405
BFRA272559
BCLA66692
BCIC186490
BCER572264
BCER405917
BCER315749
BCER288681
BCER226900
BCEN331272
BCEN331271
BCAN483179
BBUR224326
BBRO257310
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BANT592021
BANT568206
BANT261594
BANT260799
BAMY326423
BAMB398577
BAFZ390236
BABO262698
AYEL322098
AVAR240292
AURANTIMONAS
ASP62977
ASP62928
ASP1667
ASAL382245
APLE434271
APLE416269
APHA212042
APER272557
AORE350688
ANAE240017
AMET293826
AMAR329726
AMAR234826
ALAI441768
AHYD196024
AFUL224325
AEHR187272
ADEH290397
ACRY349163
ACEL351607
ACAU438753
ABUT367737
ABOR393595
ABAU360910
ABAC204669
AAEO224324


Organism features enriched in list (features available for 536 out of the 573 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00021589292
Endospores:Yes 0.00931575353
GC_Content_Range4:0-40 5.140e-9212213
GC_Content_Range4:60-100 2.284e-6119145
GC_Content_Range7:30-40 1.381e-6165166
GC_Content_Range7:50-60 0.003532491107
GC_Content_Range7:60-70 4.056e-7108134
Genome_Size_Range5:0-2 2.399e-7155155
Genome_Size_Range5:2-4 4.275e-6194197
Genome_Size_Range5:4-6 3.739e-11148184
Genome_Size_Range9:1-2 4.998e-6128128
Genome_Size_Range9:2-3 0.0010495118120
Genome_Size_Range9:3-4 0.00748937677
Genome_Size_Range9:4-5 0.00035787996
Genome_Size_Range9:5-6 6.770e-66988
Gram_Stain:Gram_Neg 8.628e-9289333
Gram_Stain:Gram_Pos 0.0000688148150
Motility:No 0.0003597148151
Motility:Yes 2.686e-7229267
Oxygen_Req:Anaerobic 0.0000781102102
Oxygen_Req:Facultative 0.0028428176201
Pathogenic_in:Human 0.0014664205213
Pathogenic_in:Plant 0.0005184915
Shape:Rod 0.0000147306347
Temp._range:Mesophilic 0.0024190428473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 13
Effective number of orgs (counting one per cluster within 468 clusters): 11

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
RALB246199 Ruminococcus albus 8 2.013e-766011
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 8325 0.0000666111511
AAUR290340 ncbi Arthrobacter aurescens TC1 0.0002440125411
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 23270 0.0003601129911
NHAM323097 ncbi Nitrobacter hamburgensis X14 0.0005033133911
MCAP243233 ncbi Methylococcus capsulatus Bath 0.0018830150911
RPAL316055 ncbi Rhodopseudomonas palustris BisA53 0.0032386158511
ASP76114 ncbi Aromatoleum aromaticum EbN1 0.0075805171211
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC10331 0.0076788171411
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A 0.0083463172711
VEIS391735 ncbi Verminephrobacter eiseniae EF01-2 0.0083463172711
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 311018 0.0084536172911
ASP232721 ncbi Acidovorax sp. JS42 0.0099666175511


Names of the homologs of the genes in the group in each of these orgs
  G7769   G7672   G7548   G7150   G7092   G7074   G6693   G6667   G6360   G6308   G6134   
RALB246199 GRAORF_4090GRAORF_4090GRAORF_4090GRAORF_4090GRAORF_4090GRAORF_4090GRAORF_4090GRAORF_4090GRAORF_4090GRAORF_4090GRAORF_4090
SAUR93061 SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778SAOUHSC_00778
AAUR290340 AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211AAUR_PTC10211
AFER243159 AFE_3147AFE_3147AFE_3147AFE_3147AFE_3147AFE_3147AFE_3147AFE_3147AFE_3147AFE_3147AFE_3147
NHAM323097 NHAM_3889NHAM_3889NHAM_3889NHAM_3889NHAM_3889NHAM_3889NHAM_3889NHAM_3889NHAM_3889NHAM_3889NHAM_3889
MCAP243233 MCA_0887MCA_0887MCA_0887MCA_0887MCA_0887MCA_0887MCA_0887MCA_0887MCA_0887MCA_0887MCA_0887
RPAL316055 RPE_3042RPE_3042RPE_3042RPE_3042RPE_3042RPE_3042RPE_3042RPE_3042RPE_3042RPE_3042RPE_3042
ASP76114 C1A74C1A74C1A74C1A74C1A74C1A74C1A74C1A74C1A74C1A74C1A74
XORY291331 XOO3089XOO3089XOO3089XOO3089XOO3089XOO3089XOO3089XOO3089XOO3089XOO3089XOO3089
XORY360094 XOOORF_4135XOOORF_4135XOOORF_4135XOOORF_4135XOOORF_4135XOOORF_4135XOOORF_4135XOOORF_4135XOOORF_4135XOOORF_4135XOOORF_4135
VEIS391735 VEIS_1283VEIS_1283VEIS_1283VEIS_1283VEIS_1283VEIS_1283VEIS_1283VEIS_1283VEIS_1283VEIS_1283VEIS_1283
XORY342109 XOO0108XOO0108XOO0108XOO0108XOO0108XOO0108XOO0108XOO0108XOO0108XOO0108XOO0108
ASP232721 AJS_2927AJS_2927AJS_2927AJS_2927AJS_2927AJS_2927AJS_2927AJS_2927AJS_2927AJS_2927AJS_2927


Organism features enriched in list (features available for 12 out of the 13 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Rice_bacterial_blight_disease 6.696e-633
GC_Content_Range4:60-100 0.000027510145
GC_Content_Range7:60-70 0.000012810134
Genome_Size_Range5:4-6 0.00199809184
Habitat:Terrestrial 0.0022259431
Pathogenic_in:Rice 6.696e-633



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ORGANISMS DEPLETED FOR GROUP:

Total number of orgs: 36
Effective number of orgs (counting one per cluster within 468 clusters): 13

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
YPES349746 ncbi Yersinia pestis Angola 0.003618228880
YPES187410 ncbi Yersinia pestis KIM 10 0.003544128910
YPES214092 ncbi Yersinia pestis CO92 0.003353128990
YPES386656 ncbi Yersinia pestis Pestoides F 0.002916029190
YPES377628 ncbi Yersinia pestis Nepal516 0.002604329350
YPES360102 ncbi Yersinia pestis Antiqua 0.002339929500
YPSE273123 ncbi Yersinia pseudotuberculosis IP 32953 0.001883029800
YPSE349747 ncbi Yersinia pseudotuberculosis IP 31758 0.001869329810
ECAR218491 ncbi Pectobacterium atrosepticum SCRI1043 0.001475230130
YENT393305 ncbi Yersinia enterocolitica enterocolitica 8081 0.000947730710
SPRO399741 ncbi Serratia proteamaculans 568 0.000122333110
ESP42895 Enterobacter sp. 0.000088533450
SDYS300267 ncbi Shigella dysenteriae Sd197 0.000056233910
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 78578 0.000051334000
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 9150 0.000036234340
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty2 0.000029034550
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT18 0.000023334750
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B67 0.000022134800
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT2 0.000010735440
SHIGELLA ncbi Shigella flexneri 2a str. 2457T 0.000010135490
SFLE198214 ncbi Shigella flexneri 2a str. 301 7.582e-635730
SBOY300268 ncbi Shigella boydii Sb227 6.088e-635910
SFLE373384 ncbi Shigella flexneri 5 str. 8401 6.013e-635920
EFER585054 ncbi Escherichia fergusonii ATCC 35469 2.447e-636620
SSON300269 ncbi Shigella sonnei Ss046 1.063e-637220
ECOL362663 ncbi Escherichia coli 536 2.712e-738110
ECOL199310 ncbi Escherichia coli CFT073 2.013e-738290
ECOL585057 ncbi Escherichia coli IAI39 1.100e-738640
ECOL585035 ncbi Escherichia coli S88 9.198e-838740
ECOL364106 ncbi Escherichia coli UTI89 6.027e-838970
ECOL585034 ncbi Escherichia coli IAI1 3.452e-839260
ECOL413997 ncbi Escherichia coli B str. REL606 2.358e-839450
ECOL331111 ncbi Escherichia coli E24377A 1.919e-839550
ECOL585055 ncbi Escherichia coli 55989 1.556e-839650
ECOO157 ncbi Escherichia coli O157:H7 EDL933 1.398e-839700
ECOL83334 Escherichia coli O157:H7 1.102e-839810


Organism features enriched in list (features available for 34 out of the 36 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 4.489e-618112
Arrangment:Singles 0.000149327286
Disease:Bubonic_plague 2.531e-866
Disease:Dysentery 2.531e-866
Disease:Gastroenteritis 0.0004289513
Disease:Typhoid_fever 0.003306822
GC_Content_Range4:40-60 1.431e-1534224
GC_Content_Range7:50-60 5.475e-1224107
Genome_Size_Range5:4-6 9.650e-1934184
Genome_Size_Range9:4-5 6.314e-112296
Genome_Size_Range9:5-6 0.00158851288
Gram_Stain:Gram_Neg 7.101e-833333
Habitat:Multiple 0.002798618178
Motility:Yes 0.000524325267
Optimal_temp.:28-30 0.000290447
Optimal_temp.:37 0.000788014106
Oxygen_Req:Facultative 2.608e-1734201
Pathogenic_in:Human 1.133e-1131213
Pathogenic_in:Rodent 0.000290447
Shape:Rod 1.093e-834347
Temp._range:Mesophilic 0.000647134473



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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7672   G7548   G7150   G7092   G7074   G6693   G6667   G6360   G6308   G6134   
G77690.9992370.9992370.9992370.9992370.9991930.9991930.9992370.9992370.9992370.999237
G76720.9992370.9992370.9992370.9991930.9991930.9992370.9992370.9992370.999237
G75480.9992370.9992370.9991930.9991930.9992370.9992370.9992370.999237
G71500.9992370.9991930.9991930.9992370.9992370.9992370.999237
G70920.9991930.9991930.9992370.9992370.9992370.999237
G70740.9992560.9991930.9991930.9991930.999193
G66930.9991930.9991930.9991930.999193
G66670.9992370.9992370.999237
G63600.9992370.999237
G63080.999237
G6134



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PAIRWISE BLAST SCORES:

  G7769   G7672   G7548   G7150   G7092   G7074   G6693   G6667   G6360   G6308   G6134   
G77690.0f00000000000
G767200.0f0000000000
G7548000.0f000000000
G71500000.0f00000000
G709200000.0f0000000
G7074000000.0f000000
G66930000000.0f00000
G666700000000.0f0000
G6360000000000.0f000
G63080000000000.0f00
G613400000000000.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- G7769-MONOMER (IS5 transposase and trans-activator) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.818, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9993 0.9992 G7092 (insH-7) G7769-MONOMER (IS5 transposase and trans-activator)
   *in cand* 0.9993 0.9992 G7548 (insH-9) G7769-MONOMER (IS5 transposase and trans-activator)
   *in cand* 0.9993 0.9992 G7150 (insH-8) G7769-MONOMER (IS5 transposase and trans-activator)
   *in cand* 0.9993 0.9992 G7672 (insH-10) G7769-MONOMER (IS5 transposase and trans-activator)
   *in cand* 0.9993 0.9992 G6134 (insH-1) G7769-MONOMER (IS5 transposase and trans-activator)
   *in cand* 0.9993 0.9992 G6308 (insH-2) G7769-MONOMER (IS5 transposase and trans-activator)
   *in cand* 0.9993 0.9992 G6360 (insH-3) G7769-MONOMER (IS5 transposase and trans-activator)
   *in cand* 0.9993 0.9992 G6667 (insH-4) G7769-MONOMER (IS5 transposase and trans-activator)
   *in cand* 0.9993 0.9992 G7769 (insH-11) G7769-MONOMER (IS5 transposase and trans-activator)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9992 G6693 (insH-5) G6693-MONOMER (IS5 transposase and trans-activator)
   *in cand* 0.9993 0.9992 G7074 (insH-6) G7074-MONOMER (IS5 transposase and trans-activator)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G7769 (centered at G7769)
G7672 (centered at G7672)
G7548 (centered at G7548)
G7150 (centered at G7150)
G7092 (centered at G7092)
G7074 (centered at G7074)
G6693 (centered at G6693)
G6667 (centered at G6667)
G6360 (centered at G6360)
G6308 (centered at G6308)
G6134 (centered at G6134)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7769   G7672   G7548   G7150   G7092   G7074   G6693   G6667   G6360   G6308   G6134   
50/62350/62350/62350/62350/62350/62350/62350/62350/62350/62350/623
AAUR290340:1:Tyes00000000000
AAVE397945:0:Tyes00000000000
AFER243159:0:Tyes00000000000
ASP232721:2:Tyes00000000000
ASP76114:2:Tyes00000000000
BAMB339670:3:Tno00000000000
BPET94624:0:Tyes00000000000
BTHA271848:1:Tno00000000000
BVIE269482:7:Tyes00000000000
ECOL316407:0:Tno00000000000
ECOL405955:1:Tyes00000000000
ECOL409438:6:Tyes00000000000
ECOL439855:4:Tno00000000000
ECOL469008:0:Tno00000000000
ECOL481805:0:Tno00000000000
ECOL585056:2:Tno00000000000
ECOL585397:0:Tno00000000000
ECOLI:0:Tno330730232786198018151774113710954042970
MAQU351348:0:Tyes00000--0000
MAQU351348:2:Tyes-----00----
MCAP243233:0:Tyes00000000000
MPET420662:0:Tyes00000000000
NHAM323097:2:Tyes00000000000
PNAP365044:4:Tyes00000000000
PPUT160488:0:Tno00000000000
PPUT351746:0:Tyes00000000000
PPUT76869:0:Tno00000000000
PSP296591:0:Tyes00000000000
PSTU379731:0:Tyes00000000000
PSYR205918:0:Tyes00000000000
PSYR223283:2:Tyes31531531531531500315315315315
RALB246199:0:Tyes00000000000
REUT381666:0:Tyes00000000000
RFER338969:1:Tyes00000000000
RPAL316055:0:Tyes00000000000
RSOL267608:1:Tyes00000000000
SAUR93061:0:Fno00000000000
SENT454169:2:Tno00000000000
SLOI323850:0:Tyes00000000000
SSP94122:0:Tyes00000000000
VCHO:1:Fyes00000000000
VCHO345073:0:Tno00000000000
VEIS391735:1:Tyes00000000000
VVUL196600:2:Tyes00000000000
XCAM190485:0:Tyes00000000000
XCAM314565:0:Tno00000000000
XCAM316273:0:Tno00000000000
XCAM487884:0:Tno00000000000
XORY291331:0:Tno00000000000
XORY342109:0:Tyes00000000000
XORY360094:0:Tno00000000000



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