CANDIDATE ID: 94

CANDIDATE ID: 94

NUMBER OF GENES: 11
AVERAGE SCORE:    9.9940458e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7348 (rseB) (b2571)
   Products of gene:
     - G7348-MONOMER (rseB)
     - CPLX0-7648 (anti-sigma factor)

- G7347 (rseC) (b2570)
   Products of gene:
     - G7347-MONOMER (SoxR and Sigma-E factor regulatory protein RseC)

- EG12341 (rseA) (b2572)
   Products of gene:
     - EG12341-MONOMER (anti-sigma factor)

- EG11897 (rpoE) (b2573)
   Products of gene:
     - RPOE-MONOMER (RNA polymerase, sigma 24 (sigma E) factor)
     - RNAPE-CPLX (RNA polymerase sigma 24)

- EG10857 (rnc) (b2567)
   Products of gene:
     - EG10857-MONOMER (RNase III)
     - CPLX0-3281 (RNase III)
       Reactions:
        RNase III mRNA processing substrate  ->  RNase III processing product mRNA + 2 a single-stranded RNA

- EG10832 (recO) (b2565)
   Products of gene:
     - EG10832-MONOMER (protein interacts with RecR and possibly RecF proteins)
     - RECFOR-CPLX (RecFOR complex)
       Reactions:
        an unstable RecA filament-DNA complex  =  a stabilized RecA filament-DNA complex

- EG10693 (pdxJ) (b2564)
   Products of gene:
     - PDXJ-MONOMER (PdxJ)
     - CPLX0-321 (pyridoxine 5'-phosphate synthase)
       Reactions:
        3-amino-1-hydroxyacetone-1-phosphate + 1-deoxy-D-xylulose 5-phosphate  ->  pyridoxine-5'-phosphate + phosphate + 2 H2O + H+
         In pathways
         PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)
         PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)

- EG10631 (nadB) (b2574)
   Products of gene:
     - L-ASPARTATE-OXID-MONOMER (L-aspartate oxidase)
       Reactions:
        L-aspartate + fumarate  ->  alpha-iminosuccinate + succinate + H+
        L-aspartate + oxygen  ->  hydrogen peroxide + alpha-iminosuccinate + H+
         In pathways
         PWY0-781 (aspartate superpathway)
         PYRIDNUCSYN-PWY (NAD biosynthesis I (from aspartate))

- EG10530 (lepB) (b2568)
   Products of gene:
     - EG10530-MONOMER (leader peptidase (signal peptidase I))
       Reactions:
        a peptide with a leader sequence  ->  a peptide + a leader sequence

- EG10529 (lepA) (b2569)
   Products of gene:
     - EG10529-MONOMER (elongation factor 4)

- EG10270 (era) (b2566)
   Products of gene:
     - EG10270-MONOMER (GTP-binding protein)



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ORGANISMS CONTAINING AT LEAST 9 GENES FROM THE GROUP:

Total number of orgs: 135
Effective number of orgs (counting one per cluster within 468 clusters): 87

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175811
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295311
YPES386656 ncbi Yersinia pestis Pestoides F11
YPES377628 ncbi Yersinia pestis Nepal51611
YPES360102 ncbi Yersinia pestis Antiqua11
YPES349746 ncbi Yersinia pestis Angola11
YPES214092 ncbi Yersinia pestis CO9211
YPES187410 ncbi Yersinia pestis KIM 1011
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808111
VVUL216895 ncbi Vibrio vulnificus CMCP610
VVUL196600 ncbi Vibrio vulnificus YJ01610
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 221063310
VFIS312309 ncbi Vibrio fischeri ES11411
VCHO345073 ncbi Vibrio cholerae O39510
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N1696110
TTUR377629 ncbi Teredinibacter turnerae T79019
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252599
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT211
SSP94122 ncbi Shewanella sp. ANA-310
SSON300269 ncbi Shigella sonnei Ss04610
SSED425104 ncbi Shewanella sediminis HAW-EB311
SPRO399741 ncbi Serratia proteamaculans 56811
SPEA398579 ncbi Shewanella pealeana ATCC 70034511
SONE211586 ncbi Shewanella oneidensis MR-110
SLOI323850 ncbi Shewanella loihica PV-411
SHIGELLA ncbi Shigella flexneri 2a str. 2457T10
SHAL458817 ncbi Shewanella halifaxensis HAW-EB411
SGLO343509 ncbi Sodalis glossinidius morsitans11
SFLE373384 ncbi Shigella flexneri 5 str. 840110
SFLE198214 ncbi Shigella flexneri 2a str. 30110
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47611
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6711
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 915011
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1811
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty211
SDYS300267 ncbi Shigella dysenteriae Sd19711
SDEN318161 ncbi Shewanella denitrificans OS21710
SDEG203122 ncbi Saccharophagus degradans 2-4010
SBOY300268 ncbi Shigella boydii Sb22710
SBAL402882 ncbi Shewanella baltica OS18510
SBAL399599 ncbi Shewanella baltica OS19510
RSOL267608 ncbi Ralstonia solanacearum GMI10009
RMET266264 ncbi Ralstonia metallidurans CH349
RFER338969 ncbi Rhodoferax ferrireducens T1189
REUT381666 ncbi Ralstonia eutropha H169
REUT264198 ncbi Ralstonia eutropha JMP1349
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC300010
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a10
PSTU379731 ncbi Pseudomonas stutzeri A15019
PSP296591 ncbi Polaromonas sp. JS6669
PPUT76869 ncbi Pseudomonas putida GB-19
PPUT351746 ncbi Pseudomonas putida F19
PPUT160488 ncbi Pseudomonas putida KT24409
PPRO298386 ncbi Photobacterium profundum SS911
PNAP365044 ncbi Polaromonas naphthalenivorans CJ29
PMUL272843 ncbi Pasteurella multocida multocida Pm7010
PMEN399739 ncbi Pseudomonas mendocina ymp9
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO111
PING357804 ncbi Psychromonas ingrahamii 3710
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC12510
PFLU220664 ncbi Pseudomonas fluorescens Pf-510
PFLU216595 ncbi Pseudomonas fluorescens SBW2510
PFLU205922 ncbi Pseudomonas fluorescens Pf0-110
PENT384676 ncbi Pseudomonas entomophila L489
PATL342610 ncbi Pseudoalteromonas atlantica T6c11
PAER208964 ncbi Pseudomonas aeruginosa PAO110
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA1410
NOCE323261 ncbi Nitrosococcus oceani ATCC 1970710
NMUL323848 ncbi Nitrosospira multiformis ATCC 251969
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E9
MSP400668 ncbi Marinomonas sp. MWYL19
MPET420662 ncbi Methylibium petroleiphilum PM19
MFLA265072 ncbi Methylobacillus flagellatus KT10
MCAP243233 ncbi Methylococcus capsulatus Bath9
MAQU351348 ncbi Marinobacter aquaeolei VT89
LCHO395495 ncbi Leptothrix cholodnii SP-69
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857811
JSP375286 ncbi Janthinobacterium sp. Marseille9
ILOI283942 ncbi Idiomarina loihiensis L2TR10
HSOM228400 ncbi Haemophilus somnus 23369
HSOM205914 ncbi Haemophilus somnus 129PT9
HINF71421 ncbi Haemophilus influenzae Rd KW209
HINF281310 ncbi Haemophilus influenzae 86-028NP9
HHAL349124 ncbi Halorhodospira halophila SL19
HCHE349521 ncbi Hahella chejuensis KCTC 239610
HARS204773 ncbi Herminiimonas arsenicoxydans9
ESP42895 Enterobacter sp.11
EFER585054 ncbi Escherichia fergusonii ATCC 3546911
ECOO157 ncbi Escherichia coli O157:H7 EDL93311
ECOL83334 Escherichia coli O157:H711
ECOL585397 ncbi Escherichia coli ED1a11
ECOL585057 ncbi Escherichia coli IAI3911
ECOL585056 ncbi Escherichia coli UMN02610
ECOL585055 ncbi Escherichia coli 5598911
ECOL585035 ncbi Escherichia coli S8811
ECOL585034 ncbi Escherichia coli IAI111
ECOL481805 ncbi Escherichia coli ATCC 873911
ECOL469008 ncbi Escherichia coli BL21(DE3)11
ECOL439855 ncbi Escherichia coli SMS-3-511
ECOL413997 ncbi Escherichia coli B str. REL60611
ECOL409438 ncbi Escherichia coli SE1111
ECOL405955 ncbi Escherichia coli APEC O111
ECOL364106 ncbi Escherichia coli UTI8911
ECOL362663 ncbi Escherichia coli 53611
ECOL331111 ncbi Escherichia coli E24377A11
ECOL316407 ncbi Escherichia coli K-12 substr. W311011
ECOL199310 ncbi Escherichia coli CFT07311
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104311
CVIO243365 ncbi Chromobacterium violaceum ATCC 1247210
CSAL290398 ncbi Chromohalobacter salexigens DSM 30439
CPSY167879 ncbi Colwellia psychrerythraea 34H11
CJAP155077 Cellvibrio japonicus10
BVIE269482 ncbi Burkholderia vietnamiensis G49
BTHA271848 ncbi Burkholderia thailandensis E2649
BSP36773 Burkholderia sp.9
BPSE320372 ncbi Burkholderia pseudomallei 1710b9
BPSE272560 ncbi Burkholderia pseudomallei K962439
BPET94624 Bordetella petrii9
BMAL320389 ncbi Burkholderia mallei NCTC 102479
BMAL320388 ncbi Burkholderia mallei SAVP19
BMAL243160 ncbi Burkholderia mallei ATCC 233449
BCEN331272 ncbi Burkholderia cenocepacia HI24249
BCEN331271 ncbi Burkholderia cenocepacia AU 10549
BAMB398577 ncbi Burkholderia ambifaria MC40-69
BAMB339670 ncbi Burkholderia ambifaria AMMD9
ASP76114 ncbi Aromatoleum aromaticum EbN110
ASP62928 ncbi Azoarcus sp. BH7210
ASP232721 ncbi Acidovorax sp. JS429
ASAL382245 ncbi Aeromonas salmonicida salmonicida A44910
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL039
APLE416269 ncbi Actinobacillus pleuropneumoniae L209
AHYD196024 Aeromonas hydrophila dhakensis10
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-19
ABOR393595 ncbi Alcanivorax borkumensis SK29
AAVE397945 ncbi Acidovorax citrulli AAC00-19


Names of the homologs of the genes in the group in each of these orgs
  G7348   G7347   EG12341   EG11897   EG10857   EG10832   EG10693   EG10631   EG10530   EG10529   EG10270   
YPSE349747 YPSIP31758_1131YPSIP31758_1132YPSIP31758_1130YPSIP31758_1129YPSIP31758_1136YPSIP31758_1138YPSIP31758_1139YPSIP31758_1128YPSIP31758_1135YPSIP31758_1134YPSIP31758_1137
YPSE273123 YPTB2895YPTB2894YPTB2896YPTB2897YPTB2890YPTB2888YPTB2887YPTB2898YPTB2891YPTB2892YPTB2889
YPES386656 YPDSF_1558YPDSF_1557YPDSF_1559YPDSF_1560YPDSF_1553YPDSF_1551YPDSF_1550YPDSF_1561YPDSF_1554YPDSF_1555YPDSF_1552
YPES377628 YPN_1201YPN_1202YPN_1200YPN_1199YPN_1206YPN_1208YPN_1209YPN_1198YPN_1205YPN_1204YPN_1207
YPES360102 YPA_2447YPA_2448YPA_2446YPA_2445YPA_2452YPA_2454YPA_2369YPA_2444YPA_2451YPA_2450YPA_2453
YPES349746 YPANGOLA_A3606YPANGOLA_A3607YPANGOLA_A3605YPANGOLA_A3604YPANGOLA_A3611YPANGOLA_A3613YPANGOLA_A3614YPANGOLA_A3603YPANGOLA_A3610YPANGOLA_A3609YPANGOLA_A3612
YPES214092 YPO2713YPO2714YPO2712YPO2711YPO2718YPO2720YPO2930YPO2710YPO2717YPO2716YPO2719
YPES187410 Y1292Y1293Y1291Y1290Y1297Y1299Y1300Y1289Y1296Y1295Y1298
YENT393305 YE1012YE1013YE1011YE1010YE1017YE1019YE1020YE1009YE1016YE1015YE1018
VVUL216895 VV1_1561VV1_1560VV1_1559VV1_1565VV1_1567VV1_1568VV1_1558VV1_1564VV1_1563VV1_1566
VVUL196600 VV2836VV2837VV2838VV2831VV2829VV2828VV2839VV2832VV2833VV2830
VPAR223926 VP2576VP2577VP2578VP2572VP2570VP2569VP2580VP2573VP2574VP2571
VFIS312309 VF2091VF2090VF2092VF2093VF2087VF2085VF2084VF2094VF2088VF2089VF2086
VCHO345073 VC0395_A2043VC0395_A2044VC0395_A2045VC0395_A2039VC0395_A2037VC0395_A2036VC0395_A2046VC0395_A2040VC0395_A2041VC0395_A2038
VCHO VC2465VC2466VC2467VC2461VC2459VC2458VC2469VC2462VC2463VC2460
TTUR377629 TERTU_1182TERTU_1180TERTU_1188TERTU_1190TERTU_2478TERTU_1178TERTU_1186TERTU_1185TERTU_1189
TDEN292415 TBD_2093TBD_2095TBD_2086TBD_2084TBD_2083TBD_2096TBD_2088TBD_2089TBD_2085
STYP99287 STM2638STM2637STM2639STM2640STM2581STM2579STM2578STM2641STM2582STM2583STM2580
SSP94122 SHEWANA3_3030SHEWANA3_3031SHEWANA3_3032SHEWANA3_3026SHEWANA3_3024SHEWANA3_3023SHEWANA3_3033SHEWANA3_3027SHEWANA3_3028SHEWANA3_3025
SSON300269 SSO_2695SSO_2694SSO_2696SSO_2697SSO_2691SSO_2689SSO_2688SSO_2692SSO_2693SSO_2690
SSED425104 SSED_1144SSED_1145SSED_1143SSED_1142SSED_1148SSED_1150SSED_1151SSED_1141SSED_1147SSED_1146SSED_1149
SPRO399741 SPRO_3674SPRO_3673SPRO_3675SPRO_3676SPRO_3669SPRO_3667SPRO_3666SPRO_3677SPRO_3670SPRO_3671SPRO_3668
SPEA398579 SPEA_1033SPEA_1034SPEA_1032SPEA_1031SPEA_1037SPEA_1039SPEA_1040SPEA_1030SPEA_1036SPEA_1035SPEA_1038
SONE211586 SO_1344SO_1343SO_1342SO_1348SO_1350SO_1351SO_1341SO_1347SO_1346SO_1349
SLOI323850 SHEW_1050SHEW_1051SHEW_1049SHEW_1048SHEW_1054SHEW_1056SHEW_1057SHEW_1047SHEW_1053SHEW_1052SHEW_1055
SHIGELLA RSEBRSECRSEARPOERNCRECOPDXJLEPBLEPAERA
SHAL458817 SHAL_1079SHAL_1080SHAL_1078SHAL_1077SHAL_1083SHAL_1085SHAL_1086SHAL_1076SHAL_1082SHAL_1081SHAL_1084
SGLO343509 SG1791SG1790SG1792SG1793SG1787SG1785SG1784SG1794SG1788SG1789SG1786
SFLE373384 SFV_2634SFV_2633SFV_2635SFV_2636SFV_2630SFV_2628SFV_2627SFV_2631SFV_2632SFV_2629
SFLE198214 AAN44130.1AAN44129.1AAN44131.1AAN44132.1AAN44126.1AAN44124.1AAN44123.1AAN44127.1AAN44128.1AAN44125.1
SENT454169 SEHA_C2852SEHA_C2851SEHA_C2853SEHA_C2854SEHA_C2847SEHA_C2845SEHA_C2844SEHA_C2856SEHA_C2849SEHA_C2850SEHA_C2846
SENT321314 SCH_2643SCH_2642SCH_2644SCH_2645SCH_2576SCH_2574SCH_2573SCH_2646SCH_2577SCH_2578SCH_2575
SENT295319 SPA0280SPA0281SPA0279SPA0278SPA0284SPA0286SPA0287SPA0277SPA0283SPA0282SPA0285
SENT220341 STY2831STY2830STY2832STY2833STY2827STY2825STY2824STY2834STY2828STY2829STY2826
SENT209261 T0272T0273T0271T0270T0277T0278T0279T0269T0275T0274T0276
SDYS300267 SDY_2812SDY_2811SDY_2813SDY_2814SDY_2808SDY_2806SDY_2805SDY_2815SDY_2809SDY_2810SDY_2807
SDEN318161 SDEN_2770SDEN_2771SDEN_2772SDEN_2766SDEN_2764SDEN_2763SDEN_2773SDEN_2767SDEN_2768SDEN_2765
SDEG203122 SDE_2249SDE_2250SDE_2251SDE_2243SDE_2241SDE_1713SDE_2252SDE_2245SDE_2246SDE_2242
SBOY300268 SBO_2599SBO_2598SBO_2600SBO_2601SBO_2595SBO_2593SBO_2592SBO_2596SBO_2597SBO_2594
SBAL402882 SHEW185_1241SHEW185_1240SHEW185_1239SHEW185_1245SHEW185_1247SHEW185_1248SHEW185_1238SHEW185_1244SHEW185_1243SHEW185_1246
SBAL399599 SBAL195_1274SBAL195_1273SBAL195_1272SBAL195_1278SBAL195_1280SBAL195_1281SBAL195_1271SBAL195_1277SBAL195_1276SBAL195_1279
RSOL267608 RSC1057RSC1055RSC1063RSC1065RSC1066RSC2447RSC1061RSC1060RSC1064
RMET266264 RMET_2423RMET_2425RMET_2418RMET_2416RMET_2415RMET_2872RMET_2420RMET_2421RMET_2417
RFER338969 RFER_1738RFER_1736RFER_1743RFER_1751RFER_1752RFER_3031RFER_1741RFER_1740RFER_1744
REUT381666 H16_A2561H16_A2563H16_A2555H16_A2553H16_A2552H16_A3036H16_A2557H16_A2558H16_A2554
REUT264198 REUT_A2257REUT_A2259REUT_A2252REUT_A2250REUT_A2249REUT_A2735REUT_A2254REUT_A2255REUT_A2251
PSYR223283 PSPTO_4222PSPTO_4223PSPTO_4224PSPTO_4217PSPTO_4215PSPTO_4214PSPTO_4225PSPTO_4219PSPTO_4220PSPTO_4216
PSYR205918 PSYR_3956PSYR_3957PSYR_3958PSYR_3951PSYR_3949PSYR_3948PSYR_3959PSYR_3953PSYR_3954PSYR_3950
PSTU379731 PST_1225PST_1223PST_1231PST_1233PST_1234PST_1222PST_1229PST_1228PST_1232
PSP296591 BPRO_3641BPRO_3643BPRO_3635BPRO_3633BPRO_3632BPRO_0905BPRO_3637BPRO_3638BPRO_3634
PPUT76869 PPUTGB1_4378PPUTGB1_4380PPUTGB1_4374PPUTGB1_4372PPUTGB1_4371PPUTGB1_4381PPUTGB1_4375PPUTGB1_4376PPUTGB1_4373
PPUT351746 PPUT_4292PPUT_4294PPUT_4288PPUT_4286PPUT_4285PPUT_4295PPUT_4289PPUT_4290PPUT_4287
PPUT160488 PP_1429PP_1427PP_1433PP_1435PP_1436PP_1426PP_1432PP_1431PP_1434
PPRO298386 PBPRA3093PBPRA3092PBPRA3094PBPRA3095PBPRA3089PBPRA3087PBPRA3086PBPRA3097PBPRA3090PBPRA3091PBPRA3088
PNAP365044 PNAP_3066PNAP_3068PNAP_3061PNAP_3059PNAP_3058PNAP_0956PNAP_3063PNAP_3064PNAP_3060
PMUL272843 PM1787PM1786PM1788PM1789PM0061PM1867PM0201PM0062PM0063PM0060
PMEN399739 PMEN_1469PMEN_1467PMEN_1475PMEN_1477PMEN_1478PMEN_1466PMEN_1473PMEN_1472PMEN_1476
PLUM243265 PLU3344PLU3343PLU3345PLU3346PLU3340PLU3338PLU3337PLU3347PLU3341PLU3342PLU3339
PING357804 PING_0067PING_0066PING_0065PING_0640PING_0642PING_0643PING_0064PING_0639PING_0638PING_0641
PHAL326442 PSHAA0728PSHAA0727PSHAA0726PSHAA0732PSHAA0734PSHAA0735PSHAA0725PSHAA0731PSHAA0730PSHAA0733
PFLU220664 PFL_1450PFL_1449PFL_1448PFL_1071PFL_1073PFL_1074PFL_1447PFL_1070PFL_1069PFL_1072
PFLU216595 PFLU1469PFLU1468PFLU1467PFLU1060PFLU1062PFLU1063PFLU1465PFLU1059PFLU1058PFLU1061
PFLU205922 PFL_1364PFL_1363PFL_1362PFL_0994PFL_0996PFL_0997PFL_1360PFL_0993PFL_0992PFL_0995
PENT384676 PSEEN4294PSEEN4296PSEEN4290PSEEN4288PSEEN4287PSEEN4297PSEEN4291PSEEN4292PSEEN4289
PATL342610 PATL_3153PATL_3152PATL_3154PATL_3155PATL_3149PATL_3710PATL_3709PATL_3156PATL_3150PATL_3151PATL_3148
PAER208964 PA0764PA0763PA0762PA0770PA0772PA0773PA0761PA0768PA0767PA0771
PAER208963 PA14_54410PA14_54420PA14_54430PA14_54330PA14_54300PA14_54290PA14_54450PA14_54350PA14_54370PA14_54320
NOCE323261 NOC_2464NOC_2465NOC_2466NOC_2458NOC_0794NOC_0795NOC_2467NOC_2460NOC_2461NOC_2457
NMUL323848 NMUL_A1748NMUL_A1746NMUL_A1753NMUL_A1757NMUL_A1759NMUL_A1743NMUL_A1752NMUL_A1751NMUL_A1754
MSUC221988 MS2230MS2231MS2229MS2228MS0368MS0239MS0370MS0371MS0367
MSP400668 MMWYL1_1100MMWYL1_1098MMWYL1_1246MMWYL1_1248MMWYL1_2830MMWYL1_1097MMWYL1_1245MMWYL1_1244MMWYL1_1247
MPET420662 MPE_A0644MPE_A0642MPE_A0650MPE_A0652MPE_A0653MPE_A1551MPE_A0648MPE_A0647MPE_A0651
MFLA265072 MFLA_1002MFLA_1001MFLA_1000MFLA_1007MFLA_1010MFLA_1011MFLA_0999MFLA_1005MFLA_1004MFLA_1008
MCAP243233 MCA_1469MCA_1471MCA_1463MCA_1461MCA_1667MCA_1472MCA_1465MCA_1466MCA_1462
MAQU351348 MAQU_2261MAQU_2263MAQU_2245MAQU_2243MAQU_2242MAQU_2264MAQU_2247MAQU_2248MAQU_2244
LCHO395495 LCHO_0603LCHO_0605LCHO_0598LCHO_0596LCHO_0595LCHO_2017LCHO_0600LCHO_0601LCHO_0597
KPNE272620 GKPORF_B2227GKPORF_B2226GKPORF_B2228GKPORF_B2229GKPORF_B2223GKPORF_B2221GKPORF_B2220GKPORF_B2232GKPORF_B2224GKPORF_B2225GKPORF_B2222
JSP375286 MMA_1364MMA_1362MMA_1370MMA_1372MMA_1373MMA_1997MMA_1368MMA_1367MMA_1371
ILOI283942 IL0814IL0815IL0816IL0810IL0808IL0807IL0817IL0811IL0812IL0809
HSOM228400 HSM_0404HSM_0403HSM_0405HSM_0406HSM_0838HSM_1984HSM_0837HSM_0836HSM_0839
HSOM205914 HS_1607HS_1608HS_1606HS_1605HS_1240HS_0093HS_1241HS_1242HS_1239
HINF71421 HI_0630HI_0850HI_0629HI_0628HI_0014HI_0332HI_0015HI_0016HI_0013
HINF281310 NTHI0716NTHI1016NTHI0718NTHI0719NTHI0019NTHI0450NTHI0020NTHI0021NTHI0018
HHAL349124 HHAL_0038HHAL_0040HHAL_0034HHAL_0032HHAL_0031HHAL_0041HHAL_0035HHAL_0036HHAL_0033
HCHE349521 HCH_01792HCH_01791HCH_01790HCH_01800HCH_01803HCH_00130HCH_01789HCH_01798HCH_01797HCH_01801
HARS204773 HEAR2069HEAR2071HEAR2063HEAR2061HEAR2060HEAR1385HEAR2065HEAR2066HEAR2062
ESP42895 ENT638_3058ENT638_3057ENT638_3059ENT638_3060ENT638_3054ENT638_3052ENT638_3051ENT638_3061ENT638_3055ENT638_3056ENT638_3053
EFER585054 EFER_0503EFER_0504EFER_0502EFER_0501EFER_0507EFER_0509EFER_0510EFER_0499EFER_0506EFER_0505EFER_0508
ECOO157 RSEBRSECRSEARPOERNCRECOPDXJNADBLEPBLEPAERA
ECOL83334 ECS3437ECS3436ECS3438ECS3439ECS3433ECS3431ECS3430ECS3440ECS3434ECS3435ECS3432
ECOL585397 ECED1_3001ECED1_3000ECED1_3002ECED1_3003ECED1_2996ECED1_2994ECED1_2993ECED1_3005ECED1_2998ECED1_2999ECED1_2995
ECOL585057 ECIAI39_2776ECIAI39_2775ECIAI39_2777ECIAI39_2778ECIAI39_2772ECIAI39_2770ECIAI39_2769ECIAI39_2779ECIAI39_2773ECIAI39_2774ECIAI39_2771
ECOL585056 ECUMN_2893ECUMN_2892ECUMN_2894ECUMN_2895ECUMN_2888ECUMN_2886ECUMN_2885ECUMN_2890ECUMN_2891ECUMN_2887
ECOL585055 EC55989_2860EC55989_2859EC55989_2861EC55989_2862EC55989_2855EC55989_2853EC55989_2852EC55989_2863EC55989_2857EC55989_2858EC55989_2854
ECOL585035 ECS88_2745ECS88_2744ECS88_2746ECS88_2747ECS88_2740ECS88_2738ECS88_2737ECS88_2748ECS88_2742ECS88_2743ECS88_2739
ECOL585034 ECIAI1_2684ECIAI1_2683ECIAI1_2685ECIAI1_2686ECIAI1_2678ECIAI1_2676ECIAI1_2675ECIAI1_2688ECIAI1_2680ECIAI1_2681ECIAI1_2677
ECOL481805 ECOLC_1106ECOLC_1107ECOLC_1105ECOLC_1104ECOLC_1110ECOLC_1112ECOLC_1113ECOLC_1103ECOLC_1109ECOLC_1108ECOLC_1111
ECOL469008 ECBD_1110ECBD_1111ECBD_1109ECBD_1108ECBD_1114ECBD_1116ECBD_1117ECBD_1106ECBD_1113ECBD_1112ECBD_1115
ECOL439855 ECSMS35_2724ECSMS35_2723ECSMS35_2725ECSMS35_2726ECSMS35_2720ECSMS35_2718ECSMS35_2717ECSMS35_2728ECSMS35_2721ECSMS35_2722ECSMS35_2719
ECOL413997 ECB_02465ECB_02464ECB_02466ECB_02467ECB_02461ECB_02459ECB_02458ECB_02468ECB_02462ECB_02463ECB_02460
ECOL409438 ECSE_2859ECSE_2858ECSE_2860ECSE_2861ECSE_2855ECSE_2853ECSE_2852ECSE_2862ECSE_2856ECSE_2857ECSE_2854
ECOL405955 APECO1_3960APECO1_3961APECO1_3959APECO1_3958APECO1_3964APECO1_3966APECO1_3967APECO1_3957APECO1_3963APECO1_3962APECO1_3965
ECOL364106 UTI89_C2893UTI89_C2892UTI89_C2894UTI89_C2895UTI89_C2888UTI89_C2886UTI89_C2885UTI89_C2896UTI89_C2890UTI89_C2891UTI89_C2887
ECOL362663 ECP_2573ECP_2572ECP_2574ECP_2575ECP_2569ECP_2567ECP_2566ECP_2576ECP_2570ECP_2571ECP_2568
ECOL331111 ECE24377A_2857ECE24377A_2856ECE24377A_2858ECE24377A_2859ECE24377A_2853ECE24377A_2851ECE24377A_2850ECE24377A_2862ECE24377A_2854ECE24377A_2855ECE24377A_2852
ECOL316407 ECK2569:JW2555:B2571ECK2568:JW2554:B2570ECK2570:JW2556:B2572ECK2571:JW2557:B2573ECK2565:JW2551:B2567ECK2563:JW2549:B2565ECK2562:JW2548:B2564ECK2572:JW2558:B2574ECK2566:JW2552:B2568ECK2567:JW2553:B2569ECK2564:JW2550:B2566
ECOL199310 C3095C3094C3096C3097C3091C3089C3088C3098C3092C3093C3090
ECAR218491 ECA3282ECA3281ECA3283ECA3284ECA3278ECA3276ECA3275ECA3285ECA3279ECA3280ECA3277
CVIO243365 CV_2060CV_2059CV_2058CV_2066CV_2069CV_2070CV_3930CV_2064CV_2063CV_2067
CSAL290398 CSAL_1627CSAL_1626CSAL_1631CSAL_1633CSAL_1634CSAL_1215CSAL_1630CSAL_1629CSAL_1632
CPSY167879 CPS_4127CPS_4126CPS_4128CPS_4129CPS_4122CPS_4120CPS_4119CPS_4130CPS_4123CPS_4124CPS_4121
CJAP155077 CJA_2211CJA_2212CJA_2213CJA_2581CJA_2578CJA_1791CJA_2214CJA_2583CJA_2584CJA_2580
BVIE269482 BCEP1808_1048BCEP1808_1046BCEP1808_1053BCEP1808_1055BCEP1808_1056BCEP1808_2582BCEP1808_1052BCEP1808_1051BCEP1808_1054
BTHA271848 BTH_I1725BTH_I1723BTH_I1730BTH_I1732BTH_I1733BTH_I0778BTH_I1729BTH_I1728BTH_I1731
BSP36773 BCEP18194_A4241BCEP18194_A4239BCEP18194_A4246BCEP18194_A4248BCEP18194_A4249BCEP18194_A5836BCEP18194_A4245BCEP18194_A4244BCEP18194_A4247
BPSE320372 BURPS1710B_A3147BURPS1710B_A3149BURPS1710B_A3141BURPS1710B_A3139BURPS1710B_A3138BURPS1710B_A1190BURPS1710B_A3142BURPS1710B_A3143BURPS1710B_A3140
BPSE272560 BPSL2434BPSL2436BPSL2429BPSL2427BPSL2426BPSL0914BPSL2430BPSL2431BPSL2428
BPET94624 BPET1760BPET1758BPET1764BPET1766BPET3259BPET4878BPET1763BPET1762BPET1765
BMAL320389 BMA10247_1794BMA10247_1796BMA10247_1789BMA10247_1787BMA10247_1786BMA10247_2103BMA10247_1790BMA10247_1791BMA10247_1788
BMAL320388 BMASAVP1_A2471BMASAVP1_A2473BMASAVP1_A2466BMASAVP1_A2464BMASAVP1_A2463BMASAVP1_A2649BMASAVP1_A2467BMASAVP1_A2468BMASAVP1_A2465
BMAL243160 BMA_0538BMA_0536BMA_0543BMA_0545BMA_0546BMA_2233BMA_0542BMA_0541BMA_0544
BCEN331272 BCEN2424_1129BCEN2424_1127BCEN2424_1134BCEN2424_1136BCEN2424_1137BCEN2424_2504BCEN2424_1133BCEN2424_1132BCEN2424_1135
BCEN331271 BCEN_0649BCEN_0647BCEN_0654BCEN_0656BCEN_0657BCEN_1893BCEN_0653BCEN_0652BCEN_0655
BAMB398577 BAMMC406_1009BAMMC406_1007BAMMC406_1014BAMMC406_1016BAMMC406_1017BAMMC406_2422BAMMC406_1013BAMMC406_1012BAMMC406_1015
BAMB339670 BAMB_1005BAMB_1003BAMB_1010BAMB_1012BAMB_1013BAMB_2551BAMB_1009BAMB_1008BAMB_1011
ASP76114 EBA5465EBA5464EBA5463EBA5539EBA5541EBA5544EBA5461EBA5536EBA5535EBA5540
ASP62928 AZO1632AZO1631AZO1630AZO1642AZO1644AZO1645AZO1629AZO1640AZO1639AZO1643
ASP232721 AJS_3272AJS_3274AJS_3267AJS_3265AJS_3263AJS_3493AJS_3269AJS_3270AJS_3266
ASAL382245 ASA_3490ASA_3491ASA_3492ASA_3486ASA_3484ASA_3483ASA_3493ASA_3487ASA_3488ASA_3485
APLE434271 APJL_0417APJL_0416APJL_0415APJL_0536APJL_0538APJL_1556APJL_0535APJL_0534APJL_0537
APLE416269 APL_0396APL_0395APL_0394APL_0543APL_0545APL_1529APL_0542APL_0541APL_0544
AHYD196024 AHA_0796AHA_0795AHA_0794AHA_0800AHA_0802AHA_0803AHA_0793AHA_0799AHA_0798AHA_0801
AEHR187272 MLG_1341MLG_1339MLG_1347MLG_1349MLG_1350MLG_1338MLG_1345MLG_1344MLG_1348
ABOR393595 ABO_1637ABO_1639ABO_1631ABO_1629ABO_1628ABO_1641ABO_1633ABO_1634ABO_1630
AAVE397945 AAVE_1191AAVE_1189AAVE_1196AAVE_1198AAVE_1199AAVE_3840AAVE_1194AAVE_1193AAVE_1197


Organism features enriched in list (features available for 129 out of the 135 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0000122692
Disease:Bubonic_plague 0.000107066
Disease:Dysentery 0.000107066
Disease:Gastroenteritis 0.00003021013
Endospores:No 0.000032028211
GC_Content_Range4:0-40 3.095e-216213
GC_Content_Range4:40-60 8.785e-1283224
GC_Content_Range7:30-40 3.051e-146166
GC_Content_Range7:40-50 0.008077435117
GC_Content_Range7:50-60 2.644e-948107
GC_Content_Range7:60-70 0.005061440134
Genome_Size_Range5:0-2 2.057e-172155
Genome_Size_Range5:2-4 9.083e-918197
Genome_Size_Range5:4-6 5.595e-2287184
Genome_Size_Range5:6-10 0.00005682247
Genome_Size_Range9:1-2 1.319e-132128
Genome_Size_Range9:2-3 7.497e-610120
Genome_Size_Range9:3-4 0.0025552877
Genome_Size_Range9:4-5 2.777e-84396
Genome_Size_Range9:5-6 1.855e-104488
Genome_Size_Range9:6-8 3.250e-62138
Gram_Stain:Gram_Neg 8.740e-22118333
Habitat:Multiple 0.003889651178
Motility:No 2.726e-811151
Motility:Yes 5.838e-1293267
Oxygen_Req:Anaerobic 3.717e-93102
Oxygen_Req:Facultative 1.057e-1482201
Pathogenic_in:No 0.000658635226
Shape:Coccus 7.176e-7382
Shape:Rod 3.620e-14112347
Shape:Spiral 0.0015876134
Temp._range:Mesophilic 0.0026232115473
Temp._range:Psychrophilic 0.004373369
Temp._range:Thermophilic 0.0012533135



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ORGANISMS CONTAINING AT MOST 2 GENES FROM THE GROUP:

Total number of orgs: 165
Effective number of orgs (counting one per cluster within 468 clusters): 137

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 101
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB82
TTHE262724 ncbi Thermus thermophilus HB272
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TLET416591 ncbi Thermotoga lettingae TMO2
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 71
SSP64471 ncbi Synechococcus sp. CC93112
SSOL273057 ncbi Sulfolobus solfataricus P21
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153052
SPYO186103 ncbi Streptococcus pyogenes MGAS82322
SMAR399550 ncbi Staphylothermus marinus F10
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23382
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122282
SEPI176279 ncbi Staphylococcus epidermidis RP62A2
SAUR93062 ncbi Staphylococcus aureus aureus COL2
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman2
SAUR418127 ncbi Staphylococcus aureus aureus Mu32
SAUR367830 Staphylococcus aureus aureus USA3002
SAUR359787 ncbi Staphylococcus aureus aureus JH12
SAUR359786 ncbi Staphylococcus aureus aureus JH92
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4762
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2522
SAUR273036 ncbi Staphylococcus aureus RF1222
SAUR196620 ncbi Staphylococcus aureus aureus MW22
SAUR158879 ncbi Staphylococcus aureus aureus N3152
SAUR158878 ncbi Staphylococcus aureus aureus Mu502
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RTYP257363 ncbi Rickettsia typhi Wilmington2
RSP101510 ncbi Rhodococcus jostii RHA12
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
RRIC452659 ncbi Rickettsia rickettsii Iowa2
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith2
RMAS416276 ncbi Rickettsia massiliae MTU52
RFEL315456 ncbi Rickettsia felis URRWXCal22
RCON272944 ncbi Rickettsia conorii Malish 72
RBEL391896 ncbi Rickettsia bellii OSU 85-3892
RBEL336407 ncbi Rickettsia bellii RML369-C1
RAKA293614 ncbi Rickettsia akari Hartford2
PTOR263820 ncbi Picrophilus torridus DSM 97901
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PMOB403833 ncbi Petrotoga mobilis SJ952
PMAR167542 ncbi Prochlorococcus marinus MIT 95152
PMAR167540 Prochlorococcus marinus pastoris MED4ax2
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13752
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 172
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma1
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong2
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NFAR247156 ncbi Nocardia farcinica IFM 101522
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H1
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30911
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S21
MLEP272631 ncbi Mycobacterium leprae TN2
MLAB410358 ncbi Methanocorpusculum labreanum Z1
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-11
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LXYL281090 ncbi Leifsonia xyli xyli CTCB072
LSAK314315 ncbi Lactobacillus sakei sakei 23K2
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPLA220668 ncbi Lactobacillus plantarum WCFS12
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCAS321967 ncbi Lactobacillus casei ATCC 3342
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LACI272621 ncbi Lactobacillus acidophilus NCFM1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I1
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J992
HPYL357544 ncbi Helicobacter pylori HPAG12
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255862
FMAG334413 ncbi Finegoldia magna ATCC 293282
DSP255470 ncbi Dehalococcoides sp. CBDB12
DSP216389 ncbi Dehalococcoides sp. BAV12
DRAD243230 ncbi Deinococcus radiodurans R11
DGEO319795 ncbi Deinococcus geothermalis DSM 113002
DETH243164 ncbi Dehalococcoides ethenogenes 1951
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3822
CMIC31964 ncbi Clavibacter michiganensis sepedonicus2
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEI306537 ncbi Corynebacterium jeikeium K4112
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130322
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131292
CCAV227941 ncbi Chlamydophila caviae GPIC0
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1351
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi1
BBUR224326 ncbi Borrelia burgdorferi B311
BAFZ390236 ncbi Borrelia afzelii PKo2
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB1
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.2
APER272557 ncbi Aeropyrum pernix K11
ANAE240017 Actinomyces oris MG12
ALAI441768 ncbi Acholeplasma laidlawii PG-8A2
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AAUR290340 ncbi Arthrobacter aurescens TC12


Names of the homologs of the genes in the group in each of these orgs
  G7348   G7347   EG12341   EG11897   EG10857   EG10832   EG10693   EG10631   EG10530   EG10529   EG10270   
UURE95667
UURE95664 UUR10_0331
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA0983TTHA0120
TTHE262724 TT_C0619TT_C1874
TPEN368408
TPAL243276 TP_0809
TLET416591 TLET_0757TLET_0059
TKOD69014
TDEN243275 TDE_2320
TACI273075
STOK273063 ST1196
SSP64471 GSYN1248GSYN2692
SSOL273057 SSO0997
SSAP342451 SSP1173SSP1189
SPYO186103 SPYM18_0597SPYM18_0517
SMAR399550
SHAE279808 SH1332
SERY405948 SACE_1870SACE_5802
SEPI176280 SE_1271SE_1254
SEPI176279 SERP1152SERP1134
SAUR93062 SACOL1641SACOL1624
SAUR93061 SAOUHSC_01688
SAUR426430 NWMN_1487NWMN_1470
SAUR418127 SAHV_1572SAHV_1554
SAUR367830 SAUSA300_1544SAUSA300_1527
SAUR359787 SAURJH1_1677SAURJH1_1659
SAUR359786 SAURJH9_1642SAURJH9_1625
SAUR282459 SAS1522SAS1505
SAUR282458 SAR1662SAR1644
SAUR273036 SAB1457CSAB1439C
SAUR196620 MW1536MW1519
SAUR158879 SA1413SA1396
SAUR158878 SAV1585SAV1567
SACI330779 SACI_0549
RTYP257363 RT0020RT0266
RSP101510 RHA1_RO06341RHA1_RO01037
RSAL288705 RSAL33209_1384
RRIC452659 RRIOWA_0196RRIOWA_0443
RRIC392021 A1G_00900A1G_02100
RMAS416276 RMA_0163RMA_0373
RFEL315456 RF_1177RF_1000
RCON272944 RC0156RC0369
RBEL391896 A1I_01370A1I_03420
RBEL336407 RBE_1182
RAKA293614 A1C_00865A1C_01975
PTOR263820 PTO0995
PPEN278197 PEPE_1104
PMOB403833 PMOB_1582PMOB_0296
PMAR167542 P9515ORF_1252P9515ORF_0116
PMAR167540 PMM1107PMM0100
PMAR167539 PRO_1089PRO_0119
PISL384616
PINT246198 PIN_A1991PIN_A0091
PHOR70601
PFUR186497
PAST100379 PAM625
PARS340102
PAER178306
PACN267747 PPA1266
PABY272844
OTSU357244 OTBS_1698OTBS_1702
NPHA348780 NP2416A
NFAR247156 NFA23350NFA18380
MTHE349307
MTHE187420 MTH1502
MSYN262723
MSTA339860 MSP_0180
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632 MSC_0462
MMOB267748
MMAZ192952
MMAR444158 MMARC6_1397
MMAR426368 MMARC7_0522
MMAR402880 MMARC5_0315
MMAR368407 MEMAR_0221
MMAR267377 MMP1277
MLEP272631 ML1659ML1226
MLAB410358 MLAB_0140
MKAN190192 MK0828
MJAN243232 MJ_0033
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_3053
MGEN243273
MFLO265311 MFL266
MCAP340047 MCAP_0507
MBUR259564
MBAR269797
MART243272 MART0536
MAEO419665
MACE188937
LXYL281090 LXX19190LXX09780
LSAK314315 LSA1290LSA0878
LREU557436 LREU_0738
LPLA220668 LP_2015LP_1967
LMES203120 LEUM_0780
LJOH257314 LJ_1322
LHEL405566 LHV_1301
LGAS324831 LGAS_1118
LDEL390333 LDB1251
LDEL321956 LBUL_1169
LCAS321967 LSEI_1562LSEI_1515
LBRE387344 LVIS_0751
LACI272621 LBA1201
IHOS453591 IGNI_0276
HWAL362976 HQ3217A
HSP64091 VNG1883G
HSAL478009 OE3646F
HPYL85963 JHP0607JHP1489
HPYL357544 HPAG1_0647HPAG1_1530
HMUK485914 HMUK_1496
HMAR272569 RRNAC3409
HBUT415426
FNUC190304 FN0152FN0777
FMAG334413 FMG_0848FMG_0736
DSP255470 CBDBA994CBDBA1338
DSP216389 DEHABAV1_0908DEHABAV1_1193
DRAD243230 DR_0646
DGEO319795 DGEO_2269DGEO_1162
DETH243164 DET_1025
CTRA471473
CTRA471472
CSUL444179
CPRO264201 PC0274
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CMUR243161
CMIC443906 CMM_1319CMM_1358
CMIC31964 CMS2075CMS0746
CMET456442
CMAQ397948 CMAQ_1793
CKOR374847
CJEI306537 JK1623JK1206
CGLU196627 CG2273CG2509
CFEL264202
CEFF196164 CE1976
CDIP257309 DIP0709DIP1544
CCAV227941
CABO218497
BXEN266265
BTUR314724 BT0705
BLON206672 BL1375
BHER314723
BGAR290434 BG0727
BBUR224326 BB_0705
BAFZ390236 BAPKO_0748BAPKO_0704
AYEL322098 AYWB_110
AURANTIMONAS
ASP1667 ARTH_2651ARTH_2559
APER272557 APE0950
ANAE240017 ANA_2695ANA_0454
ALAI441768 ACL_0676ACL_0948
AFUL224325
AAUR290340 AAUR_2641AAUR_2533


Organism features enriched in list (features available for 156 out of the 165 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00003931092
Arrangment:Clusters 1.187e-71517
Arrangment:Tetrads 0.004982844
Disease:Pharyngitis 0.000023088
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 3.860e-71111
Disease:bronchitis_and_pneumonitis 0.000023088
Endospores:No 5.403e-1597211
Endospores:Yes 6.335e-6253
GC_Content_Range4:0-40 3.022e-783213
GC_Content_Range4:60-100 0.000077722145
GC_Content_Range7:0-30 0.00108612247
GC_Content_Range7:30-40 0.000269061166
GC_Content_Range7:50-60 0.001527617107
GC_Content_Range7:60-70 0.000017518134
Genome_Size_Range5:0-2 5.570e-1985155
Genome_Size_Range5:4-6 1.373e-235184
Genome_Size_Range5:6-10 0.0010140447
Genome_Size_Range9:0-1 1.748e-72027
Genome_Size_Range9:1-2 1.937e-1165128
Genome_Size_Range9:2-3 0.000066449120
Genome_Size_Range9:4-5 5.576e-11396
Genome_Size_Range9:5-6 6.555e-11288
Genome_Size_Range9:6-8 0.0000694138
Gram_Stain:Gram_Neg 5.289e-1745333
Gram_Stain:Gram_Pos 0.005996851150
Habitat:Host-associated 0.000193773206
Habitat:Multiple 3.412e-724178
Habitat:Specialized 0.00113462453
Motility:No 0.000019660151
Motility:Yes 2.531e-745267
Optimal_temp.:- 2.667e-645257
Optimal_temp.:30-37 5.346e-71518
Optimal_temp.:85 0.004982844
Oxygen_Req:Aerobic 0.003252437185
Oxygen_Req:Anaerobic 0.000200342102
Shape:Coccus 0.00013633682
Shape:Irregular_coccus 9.469e-111717
Shape:Rod 1.982e-1256347
Shape:Sphere 1.584e-71619
Temp._range:Hyperthermophilic 1.918e-71823
Temp._range:Mesophilic 0.0023796115473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181320.6924
AST-PWY (arginine degradation II (AST pathway))120910.6421
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951150.6112
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761080.6046
GLYCOCAT-PWY (glycogen degradation I)2461270.5874
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911080.5629
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81660.5612
GALACTITOLCAT-PWY (galactitol degradation)73610.5473
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251150.5373
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001310.5146
GLUCONSUPER-PWY (D-gluconate degradation)2291130.5121
GLUCARDEG-PWY (D-glucarate degradation I)152890.5086
PWY-5918 (heme biosynthesis I)2721230.5032
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491170.5014
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491170.5014
PWY-5913 (TCA cycle variation IV)3011280.4894
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861240.4849
PWY-5148 (acyl-CoA hydrolysis)2271090.4842
PWY-6196 (serine racemization)102680.4833
PWY-5386 (methylglyoxal degradation I)3051280.4825
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)149850.4814
PWY-1269 (CMP-KDO biosynthesis I)3251320.4802
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50440.4756
PWY-4041 (γ-glutamyl cycle)2791210.4743
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901230.4699
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911230.4681
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961240.4670
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))183930.4563
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)135770.4515
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391310.4501
LPSSYN-PWY (superpathway of lipopolysaccharide biosynthesis)91600.4444
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481320.4440
PWY0-901 (selenocysteine biosynthesis I (bacteria))2301040.4373
LIPASYN-PWY (phospholipases)212990.4363
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))191930.4361
PWY-46 (putrescine biosynthesis III)138760.4325
GALACTARDEG-PWY (D-galactarate degradation I)151800.4299
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation)212980.4281
PWY0-981 (taurine degradation IV)106640.4254
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94590.4205
PWY0-1182 (trehalose degradation II (trehalase))70490.4174
DAPLYSINESYN-PWY (lysine biosynthesis I)3421270.4141
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001180.4132
GLUTDEG-PWY (glutamate degradation II)194910.4119
TYRFUMCAT-PWY (tyrosine degradation I)184880.4110
PWY-561 (superpathway of glyoxylate cycle)162810.4076
GLYOXYLATE-BYPASS (glyoxylate cycle)169830.4064
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))138730.4043
CHOLINE-BETAINE-ANA-PWY (choline degradation I)135720.4042
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291230.4035
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551060.4021



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7347   EG12341   EG11897   EG10857   EG10832   EG10693   EG10631   EG10530   EG10529   EG10270   
G73480.9991960.9996250.9997730.9996160.9995570.9994520.9994830.9996560.999690.999602
G73470.9991440.9990690.9987880.9986120.9986020.9986510.998880.9990130.998737
EG123410.9996520.9992960.9992040.9991070.999450.9993360.9993760.999273
EG118970.9995320.9995430.9993320.9994740.9995540.9996040.99952
EG108570.9997880.9997640.9989440.9999270.999750.999929
EG108320.9997870.9990930.9997370.999720.999885
EG106930.9987390.9997150.9994510.999785
EG106310.9990440.9991760.999062
EG105300.9998620.999887
EG105290.999808
EG10270



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PAIRWISE BLAST SCORES:

  G7348   G7347   EG12341   EG11897   EG10857   EG10832   EG10693   EG10631   EG10530   EG10529   EG10270   
G73480.0f0----------
G7347-0.0f0---------
EG12341--0.0f0--------
EG11897---0.0f0-------
EG10857----0.0f0------
EG10832-----0.0f0-----
EG10693------0.0f0----
EG10631-------0.0f0---
EG10530--------0.0f0--
EG10529---------0.0f0-
EG10270----------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10270 EG10529 EG10530 EG10631 EG10693 EG10832 EG10857 EG11897 EG12341 G7347 G7348 (centered at EG10529)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7348   G7347   EG12341   EG11897   EG10857   EG10832   EG10693   EG10631   EG10530   EG10529   EG10270   
140/62366/623101/623287/623414/623219/623312/623364/623368/623416/623406/623
AAEO224324:0:Tyes------336-0-741
AAUR290340:2:Tyes---106---0---
AAVE397945:0:Tyes2--079102604548
ABAC204669:0:Tyes---2468-959-2024363803316
ABAU360910:0:Tyes2--0681341-547
ABOR393595:0:Tyes9--1131013562
ABUT367737:0:Tyes----1132-1704421560-
ACAU438753:0:Tyes---21981771-1768-177001772
ACEL351607:0:Tyes---19311359--0---
ACRY349163:8:Tyes----1-23881291010262
ADEH290397:0:Tyes---2800157-02090122121160
AEHR187272:0:Tyes3--19111207610
AFER243159:0:Tyes---931010562
AHYD196024:0:Tyes3-2179100658
ALAI441768:0:Tyes---------0269
AMAR234826:0:Tyes----462-0-199--
AMAR329726:9:Tyes---835--0119921382481-
AMET293826:0:Tyes---304926822946-0-29742948
ANAE240017:0:Tyes---20480------
AORE350688:0:Tyes---025450---2649
APER272557:0:Tyes-------0---
APHA212042:0:Tyes----932-5930605--
APLE416269:0:Tyes-210148150-1156147146149
APLE434271:0:Tno-210108110-1144107106109
ASAL382245:5:Tyes7-8931010452
ASP1667:3:Tyes---93---0---
ASP232721:2:Tyes9--11420222673
ASP62928:0:Tyes3-211315160111014
ASP62977:0:Tyes----3109562
ASP76114:2:Tyes3-214446470424145
AVAR240292:3:Tyes---4509--227819549404091
AYEL322098:4:Tyes----------0
BABO262698:0:Tno---------0-
BABO262698:1:Tno------679-0-3
BAFZ390236:2:Fyes----44-----0
BAMB339670:3:Tno2--079101590658
BAMB398577:3:Tno2--079101439658
BAMY326423:0:Tyes---01349--2264-21532131
BANT260799:0:Tno----0--624-516497
BANT261594:2:Tno----0--647-537517
BANT568206:2:Tyes----0--3967-38523833
BANT592021:2:Tno----0--657-541522
BAPH198804:0:Tyes----1---230
BAPH372461:0:Tyes----0---12-
BBAC264462:0:Tyes---01107-109822139997-
BBAC360095:0:Tyes----13414-0787-
BBRO257310:0:Tyes412--4144084060-409410407
BBUR224326:21:Fno----0------
BCAN483179:0:Tno---------0-
BCAN483179:1:Tno------720-0-3
BCEN331271:2:Tno2--079101263658
BCEN331272:3:Tyes2--079101375658
BCER226900:1:Tyes----2649--3217031113091
BCER288681:0:Tno----0--565-456437
BCER315749:1:Tyes----10--6410545526
BCER405917:1:Tyes----0--603-490470
BCER572264:1:Tno----0--582-470451
BCIC186490:0:Tyes----2-0313341
BCLA66692:0:Tyes---020861465-1329-14371463
BFRA272559:1:Tyes---3414--36230125-3786
BFRA295405:0:Tno---3757--39950160-4124
BGAR290434:2:Fyes----0------
BHAL272558:0:Tyes---02270----11191144
BHEN283166:0:Tyes----419421959-4180-
BJAP224911:0:Fyes---162533-25360253456412532
BLIC279010:0:Tyes---0---2635--2444
BLON206672:0:Tyes-------0---
BMAL243160:1:Tno2--079101487658
BMAL320388:1:Tno8--10310180452
BMAL320389:1:Tyes8--10310306452
BMEL224914:0:Tno---------0-
BMEL224914:1:Tno------0-685-683
BMEL359391:0:Tno---------0-
BMEL359391:1:Tno------654-0-3
BOVI236:0:Tyes---------0-
BOVI236:1:Tyes------619-0-3
BPAR257311:0:Tno1455--1457145114490-145214531450
BPER257313:0:Tyes331--3333273250-328329326
BPET94624:0:Tyes2--06815163154547
BPSE272560:1:Tyes1526--15281521151915180152215231520
BPSE320372:1:Tno1845--18471839183718360184018411838
BPSE320373:1:Tno1738--1740-173217310173417351733
BPUM315750:0:Tyes---01358--2277120321392117
BQUI283165:0:Tyes----327329710-3260-
BSP107806:2:Tyes----1---230
BSP36773:2:Tyes2--079101629658
BSP376:0:Tyes----3556355335593619355703555
BSUB:0:Tyes---015142484-2750-25092486
BSUI204722:0:Tyes---------0-
BSUI204722:1:Tyes------708-0-3
BSUI470137:0:Tno---------0-
BSUI470137:1:Tno------725-0--
BTHA271848:1:Tno928--9269339359360932931934
BTHE226186:0:Tyes---1481--7460136-661
BTHU281309:1:Tno----0--571-464445
BTHU412694:1:Tno----0--516-416399
BTRI382640:1:Tyes----6316331325-6300632
BTUR314724:0:Fyes----0------
BVIE269482:7:Tyes2--079101520658
BWEI315730:4:Tyes---01947--2540193724362417
CACE272562:1:Tyes---1983448---460-0
CAULO:0:Tyes----53954353619135380-
CBEI290402:0:Tyes----343---3031020
CBLO203907:0:Tyes----1-0-23-
CBLO291272:0:Tno----1-0-23-
CBOT36826:1:Tno----11503--0522504
CBOT441770:0:Tyes----12---0605587
CBOT441771:0:Tno----11---0555537
CBOT441772:1:Tno----0----490472
CBOT498213:1:Tno----0----601583
CBOT508765:1:Tyes----350----019
CBOT515621:2:Tyes----11---0-525
CBOT536232:0:Tno----12---0600582
CBUR227377:1:Tyes----1339133713300134013411338
CBUR360115:1:Tno----1399139713920140014011398
CBUR434922:2:Tno----2491453103
CCHL340177:0:Tyes---14081179-06757--
CCON360104:2:Tyes----0---263287-
CCUR360105:0:Tyes----1359---0856-
CDES477974:0:Tyes---1968499--051619071891
CDIF272563:1:Tyes----0----12401209
CDIP257309:0:Tyes---0828------
CEFF196164:0:Fyes----0------
CFET360106:0:Tyes----1040-0-491778-
CGLU196627:0:Tyes----0221-----
CHOM360107:1:Tyes----821-913-2640-
CHUT269798:0:Tyes---0--2172-1349-1846
CHYD246194:0:Tyes----1009--1903926020
CJAP155077:0:Tyes409-4104117787760412780781777
CJEI306537:0:Tyes---4340------
CJEJ192222:0:Tyes----765-379-0173-
CJEJ195099:0:Tno----832-415-0220-
CJEJ354242:2:Tyes----731-369-0169-
CJEJ360109:0:Tyes----1417-0-496255-
CJEJ407148:0:Tno----752-390-0175-
CKLU431943:1:Tyes-------0647-165
CMAQ397948:0:Tyes-------0---
CMIC31964:2:Tyes---12710------
CMIC443906:2:Tyes---039------
CNOV386415:0:Tyes----8701129--011481130
CPEL335992:0:Tyes------615-6130-
CPER195102:1:Tyes-----1425--014491426
CPER195103:0:Tno-----1665--016891666
CPER289380:3:Tyes-----0---241
CPHY357809:0:Tyes----1777---220916480
CPRO264201:0:Fyes----0------
CPSY167879:0:Tyes8791031011452
CRUT413404:0:Tyes----7-53301506
CSAL290398:0:Tyes--4254244294314320428427430
CSP501479:6:Fyes----169--0168-172
CSP501479:7:Fyes------0----
CSP78:2:Tyes---1140563-55931635620-
CTEP194439:0:Tyes---3101760-02251100--
CTET212717:0:Tyes----0---9727711
CVES412965:0:Tyes----7-52961406
CVIO243365:0:Tyes2-10811121918659
DARO159087:0:Tyes---1810110659
DDES207559:0:Tyes----0-345126112811291920
DETH243164:0:Tyes----0------
DGEO319795:1:Tyes---1104---0---
DHAF138119:0:Tyes---42572485--0242029702938
DNOD246195:0:Tyes----1---230
DOLE96561:0:Tyes----1000-2769880-613
DPSY177439:2:Tyes----1172-15436160-1628
DRAD243230:3:Tyes----------0
DRED349161:0:Tyes---214019212334-0-23602338
DSHI398580:5:Tyes----4-0-3-5
DSP216389:0:Tyes----0--285---
DSP255470:0:Tno----0--282---
DVUL882:1:Tyes----1382-184817506486470
ECAN269484:0:Tyes----577-0-89--
ECAR218491:0:Tyes768931010452
ECHA205920:0:Tyes----703-4670359--
ECOL199310:0:Tno768931010452
ECOL316407:0:Tno768931010452
ECOL331111:6:Tno768931011452
ECOL362663:0:Tno768931010452
ECOL364106:1:Tno8791031011562
ECOL405955:2:Tyes768931010452
ECOL409438:6:Tyes768931010452
ECOL413997:0:Tno768931010452
ECOL439855:4:Tno768931010452
ECOL469008:0:Tno4532810110769
ECOL481805:0:Tno342179100658
ECOL585034:0:Tno98101131012562
ECOL585035:0:Tno768931010452
ECOL585055:0:Tno768931010452
ECOL585056:2:Tno7689310-452
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ECOL83334:0:Tno768931010452
ECOLI:0:Tno768931010452
ECOO157:0:Tno8791031011562
EFAE226185:3:Tyes----70251---052
EFER585054:1:Tyes342179100658
ELIT314225:0:Tyes------01817434927432
ERUM254945:0:Tyes----575-0-89--
ERUM302409:0:Tno----572-0-91--
ESP42895:1:Tyes768931010452
FALN326424:0:Tyes---1920--842---
FJOH376686:0:Tyes---935--150538760-1696
FMAG334413:1:Tyes----112-----0
FNOD381764:0:Tyes---50433-----0
FNUC190304:0:Tyes----0----625-
FPHI484022:1:Tyes----12331469-188812327210
FRANT:0:Tno----37853-2983794850
FSP106370:0:Tyes---248623170-3105---
FSP1855:0:Tyes---762-1912-0---
FSUC59374:0:Tyes----24612631106602060--
FTUL351581:0:Tno----441593-11574400645
FTUL393011:0:Tno----408550-10584070601
FTUL393115:0:Tyes----36252-2843634690
FTUL401614:0:Tyes----13441127-582134501029
FTUL418136:0:Tno----1311-24301305717
FTUL458234:0:Tno----435587-10994340640
GBET391165:0:Tyes------1073-0516-
GFOR411154:0:Tyes---311--0--31082774
GKAU235909:1:Tyes---01084--2513109524202400
GMET269799:1:Tyes----558118012519710556
GOXY290633:5:Tyes------1989-155701559
GSUL243231:0:Tyes----16430122012436866851641
GTHE420246:1:Tyes---0887--2342179122552236
GURA351605:0:Tyes---03039-26262385240224013037
GVIO251221:0:Tyes---3526--075119412692-
HACI382638:1:Tyes----750-0-1295--
HARS204773:0:Tyes638--6406326306290634635631
HAUR316274:2:Tyes---01209--1932-2818-
HCHE349521:0:Tyes1596-159515941602160401593160015991603
HDUC233412:0:Tyes-210362360--363364361
HHAL349124:0:Tyes7--931010452
HHEP235279:0:Tyes----703-8680138787-
HINF281310:0:Tyes6479256486491396--230
HINF374930:0:Tyes13471115134813493180--317316-
HINF71421:0:Tno5988175975961305--230
HMAR272569:8:Tyes-------0---
HMOD498761:0:Tyes---013151623-461133516021621
HMUK485914:1:Tyes-------0---
HNEP81032:0:Tyes------729546-0-
HPY:0:Tno----85-1014-0--
HPYL357544:1:Tyes----0-907----
HPYL85963:0:Tno----0-874----
HSAL478009:4:Tyes-------0---
HSOM205914:1:Tyes151215131511151011520--115311541151
HSOM228400:0:Tno10234391597--438437440
HSP64091:2:Tno-------0---
HWAL362976:1:Tyes-------0---
IHOS453591:0:Tyes-------0---
ILOI283942:0:Tyes7-8931010452
JSP290400:1:Tyes----6-0295529488
JSP375286:0:Tyes2--081011646659
KPNE272620:2:Tyes768931011452
KRAD266940:2:Fyes---1680--2368---
LACI272621:0:Tyes----------0
LBIF355278:2:Tyes---1621--30305--
LBIF456481:2:Tno---1666--30312--
LBOR355276:1:Tyes---032-914917971741-
LBOR355277:1:Tno---01081-725728782549-
LBRE387344:2:Tyes----------0
LCAS321967:1:Tyes---------470
LCHO395495:0:Tyes8--103101441562
LDEL321956:0:Tyes----------0
LDEL390333:0:Tyes----------0
LGAS324831:0:Tyes----------0
LHEL405566:0:Tyes----------0
LINN272626:1:Tno----446----150
LINT189518:0:Tyes----0------
LINT189518:1:Tyes---0--3113081594685-
LINT267671:0:Tno----0------
LINT267671:1:Tno---1227--9909930756-
LINT363253:3:Tyes----207--0559356280
LJOH257314:0:Tyes----------0
LLAC272622:5:Tyes----432----7620
LLAC272623:0:Tyes----451----7570
LMES203120:1:Tyes----------0
LMON169963:0:Tno----371----170
LMON265669:0:Tyes----346--562-170
LPLA220668:0:Tyes---------400
LPNE272624:0:Tno---7761067143146010691070142
LPNE297245:1:Fno---6099911421430993994141
LPNE297246:1:Fyes---6749761441470978979143
LPNE400673:0:Tno---03051316131314633073081317
LREU557436:0:Tyes----------0
LSAK314315:0:Tyes---------4150
LSPH444177:1:Tyes---292502071--1021892072
LWEL386043:0:Tyes----538---0206191
LXYL281090:0:Tyes---8070------
MABS561007:1:Tyes---02018--1435---
MAER449447:0:Tyes---02892-21223386209537291431
MAQU351348:2:Tyes18--2031021562
MART243272:0:Tyes----------0
MAVI243243:0:Tyes---968588--0---
MBOV233413:0:Tno---16481343--0---
MBOV410289:0:Tno---17231322--0---
MCAP243233:0:Tyes8--102019211451
MCAP340047:0:Tyes----------0
MEXT419610:0:Tyes----12260122315991225-1227
MFLA265072:0:Tyes3-21811120659
MFLO265311:0:Tyes----------0
MGIL350054:3:Tyes---1073573--0---
MHUN323259:0:Tyes-------0---
MJAN243232:2:Tyes-------0---
MKAN190192:0:Tyes-------0---
MLAB410358:0:Tyes-------0---
MLEP272631:0:Tyes----264--0---
MLOT266835:2:Tyes---5328--03446503423955036
MMAG342108:0:Tyes----4-01630316085
MMAR267377:0:Tyes-------0---
MMAR368407:0:Tyes-------0---
MMAR394221:0:Tyes----1419-1421--0-
MMAR402880:1:Tyes-------0---
MMAR426368:0:Tyes-------0---
MMAR444158:0:Tyes-------0---
MMYC272632:0:Tyes----------0
MPET420662:1:Tyes2--081011909659
MSME246196:0:Tyes---0499--1277---
MSP164756:1:Tno---0572--1697---
MSP164757:0:Tno---0507--1663---
MSP189918:2:Tyes---0589--1726---
MSP266779:3:Tyes---302--5561624031472
MSP400668:0:Tyes3--114714917660146145148
MSP409:2:Tyes---59756153-6156-615406152
MSTA339860:0:Tyes-------0---
MSUC221988:0:Tyes20562057205520541310--133134130
MTBCDC:0:Tno---17821438--0---
MTBRV:0:Tno---16461344--0---
MTHE187420:0:Tyes-------0---
MTHE264732:0:Tyes---1232----376019
MTUB336982:0:Tno---16211313--0---
MTUB419947:0:Tyes---17161397--0---
MVAN350058:0:Tyes---0391--1015---
MXAN246197:0:Tyes---3153241-816108410244
NARO279238:0:Tyes------5060141022051408
NEUR228410:0:Tyes---448441-4390443444440
NEUT335283:2:Tyes---92-0221451
NFAR247156:2:Tyes---503---0---
NGON242231:0:Tyes----011371136119177781
NHAM323097:2:Tyes---01963-1966251919642181962
NMEN122586:0:Tno----28753540366367288
NMEN122587:0:Tyes----010941093114579801
NMEN272831:0:Tno----091591497577781
NMEN374833:0:Tno----010401039109486871
NMUL323848:3:Tyes5--310141609811
NOCE323261:1:Tyes1642-164316441636011645163816391635
NPHA348780:2:Tyes-------0---
NSEN222891:0:Tyes----572-0-449--
NSP103690:6:Tyes---3090--0100527832311699
NSP35761:1:Tyes---422028131453-0---
NSP387092:0:Tyes----0-8931154516234-
NWIN323098:0:Tyes----1597-16002105159801596
OANT439375:5:Tyes---1030--1408022439292241
OCAR504832:0:Tyes---01589-15862687158833221590
OIHE221109:0:Tyes---01332---134417841763
OTSU357244:0:Fyes-------02--
PACN267747:0:Tyes---0-------
PAER208963:0:Tyes9-101131012562
PAER208964:0:Tno3-219111207610
PARC259536:0:Tyes----356301104
PAST100379:0:Tyes----------0
PATL342610:0:Tyes546715615608230
PCAR338963:0:Tyes---2547809040972810271028811
PCRY335284:1:Tyes----356235104
PDIS435591:0:Tyes---1090--014811296-883
PENT384676:0:Tyes7--931010452
PFLU205922:0:Tyes375-374373245371103
PFLU216595:1:Tyes397-396395245394103
PFLU220664:0:Tyes377-376375245374103
PGIN242619:0:Tyes------08131186-1312
PHAL326442:1:Tyes3-2179100658
PING357804:0:Tyes3-215555575580554553556
PINT246198:1:Tyes-------1894--0
PLUM243265:0:Fyes768931010452
PLUT319225:0:Tyes---1261--0114995--
PMAR146891:0:Tyes------10950-355-
PMAR167539:0:Tyes------9930---
PMAR167540:0:Tyes------10270---
PMAR167542:0:Tyes------11200---
PMAR167546:0:Tyes------11000-322-
PMAR167555:0:Tyes------13200-316-
PMAR59920:0:Tno------0843-1139-
PMAR74546:0:Tyes------10310515322-
PMAR74547:0:Tyes------9320-88-
PMAR93060:0:Tyes------11450585392-
PMEN399739:0:Tyes3--19111207610
PMOB403833:0:Tyes---1275------0
PMUL272843:1:Tyes172717261728172911807-141230
PNAP365044:8:Tyes2126--21282121211921180212321242120
PPEN278197:0:Tyes----------0
PPRO298386:2:Tyes768931011452
PPUT160488:0:Tno3--179100658
PPUT351746:0:Tyes7--931010452
PPUT76869:0:Tno7--931010452
PRUM264731:0:Tyes-------0436-919
PSP117:0:Tyes---4459--01797---
PSP296591:2:Tyes2720--27222714271227110271627172713
PSP312153:0:Tyes----245720103
PSP56811:2:Tyes----2451610103
PSTU379731:0:Tyes3--19111207610
PSYR205918:0:Tyes8-91031011562
PSYR223283:2:Tyes8-91031011562
PTHE370438:0:Tyes---19561557693-01536669691
PTOR263820:0:Tyes-------0---
RAKA293614:0:Fyes--------0207-
RALB246199:0:Tyes----1242--3141--0
RBEL336407:0:Tyes--------0--
RBEL391896:0:Fno--------0385-
RCAN293613:0:Fyes-------140201-
RCAS383372:0:Tyes---3430--6033097-886
RCON272944:0:Tno--------0217-
RDEN375451:4:Tyes----270-266--0271
RETL347834:3:Tyes-------0---
RETL347834:4:Tyes---0-------
RETL347834:5:Tyes------2497-113101133
REUT264198:3:Tyes8--10310493562
REUT381666:2:Tyes9--11310476562
RFEL315456:2:Tyes--------1780-
RFER338969:1:Tyes2--0715161295548
RLEG216596:4:Tyes-------0---
RLEG216596:6:Tyes------2970-126301265
RMAS416276:1:Tyes--------0174-
RMET266264:2:Tyes8--10310453562
RPAL258594:0:Tyes----2357-2354709235602358
RPAL316055:0:Tyes----2176-21793542217702175
RPAL316056:0:Tyes----2046-20433748204502047
RPAL316057:0:Tyes----2300-2297865229902301
RPAL316058:0:Tyes----2162-2159644216102163
RPOM246200:1:Tyes----2457-2460250324582890
RPRO272947:0:Tyes-------120156-
RRIC392021:0:Fno--------0223-
RRIC452659:0:Tyes--------0227-
RRUB269796:1:Tyes----418-42004191925417
RSAL288705:0:Tyes---0-------
RSOL267608:1:Tyes2--0810111431659
RSP101510:3:Fyes---5291---0---
RSP357808:0:Tyes---40464119--01690-1722
RSPH272943:4:Tyes----3-0-24294
RSPH349101:2:Tno----3-0-24604
RSPH349102:5:Tyes----1-4-25440
RTYP257363:0:Tno--------0246-
RXYL266117:0:Tyes---1612---0141-1403
SACI330779:0:Tyes-------0---
SACI56780:0:Tyes---02326-140312422237-2331
SAGA205921:0:Tno----0----173662
SAGA208435:0:Tno----0----176757
SAGA211110:0:Tyes----0----171806
SALA317655:1:Tyes------200112528420
SARE391037:0:Tyes---15460--341822--
SAUR158878:1:Tno---------180
SAUR158879:1:Tno---------180
SAUR196620:0:Tno---------170
SAUR273036:0:Tno---------180
SAUR282458:0:Tno---------170
SAUR282459:0:Tno---------170
SAUR359786:1:Tno---------170
SAUR359787:1:Tno---------180
SAUR367830:3:Tno---------170
SAUR418127:0:Tyes---------180
SAUR426430:0:Tno---------170
SAUR93061:0:Fno---------0-
SAUR93062:1:Tno---------170
SAVE227882:1:Fyes---16700--2061---
SBAL399599:3:Tyes3-2179100658
SBAL402882:1:Tno3-2179100658
SBOY300268:1:Tyes7689310-452
SCO:2:Fyes---5132218--0---
SDEG203122:0:Tyes546-5475485405380549542543539
SDEN318161:0:Tyes7-8931010452
SDYS300267:1:Tyes768931010452
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SENT209261:0:Tno342179100658
SENT220341:0:Tno768931010452
SENT295319:0:Tno342179100658
SENT321314:2:Tno7069717231073452
SENT454169:2:Tno768931011452
SEPI176279:1:Tyes---------180
SEPI176280:0:Tno---------170
SERY405948:0:Tyes---0---3816---
SFLE198214:0:Tyes7689310-452
SFLE373384:0:Tno7689310-452
SFUM335543:0:Tyes---721276-155170-274
SGLO343509:3:Tyes768931010452
SGOR29390:0:Tyes----70----1110
SHAE279808:0:Tyes---------0-
SHAL458817:0:Tyes342179100658
SHIGELLA:0:Tno7689310-452
SLAC55218:0:Fyes-------0---
SLAC55218:1:Fyes----1754-1750--01755
SLOI323850:0:Tyes342179100658
SMED366394:2:Tyes---0-------
SMED366394:3:Tyes------127919027502
SMEL266834:1:Tyes---0-------
SMEL266834:2:Tyes------18498368120814
SMUT210007:0:Tyes----105----0198
SONE211586:1:Tyes3-2179100658
SPEA398579:0:Tno342179100658
SPNE1313:0:Tyes----241----1990
SPNE170187:0:Tyes----127----840
SPNE171101:0:Tno----256----2110
SPNE487213:0:Tno----0----42235
SPNE487214:0:Tno----278----2370
SPNE488221:0:Tno----282----2240
SPRO399741:1:Tyes8791031011452
SPYO160490:0:Tno----39----4570
SPYO186103:0:Tno----54-----0
SPYO193567:0:Tno----544----0586
SPYO198466:0:Tno----38----4000
SPYO286636:0:Tno----57----3850
SPYO293653:0:Tno----48----3900
SPYO319701:0:Tyes----50----3800
SPYO370551:0:Tno----47----5070
SPYO370552:0:Tno----48----5050
SPYO370553:0:Tno----47----4440
SPYO370554:0:Tyes----69----5420
SRUB309807:1:Tyes---832--1630--164
SSAP342451:2:Tyes---------016
SSED425104:0:Tyes342179100658
SSOL273057:0:Tyes-------0---
SSON300269:1:Tyes7689310-452
SSP1131:0:Tyes------53212040--
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SSP292414:2:Tyes----1914191119181599-01913
SSP321327:0:Tyes---855--161234816150-
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SSP644076:6:Fyes----1-5---0
SSP644076:7:Fyes-------0---
SSP64471:0:Tyes------01372---
SSP84588:0:Tyes------0131686--
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SSUI391296:0:Tyes----367----0569
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STHE322159:2:Tyes----527----2270
STOK273063:0:Tyes-------0---
STRO369723:0:Tyes---24110--2983---
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TCRU317025:0:Tyes----5780436
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TFUS269800:0:Tyes---0106--2367---
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TTHE300852:2:Tyes-------890--0
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VCHO:0:Tyes7-8931011452
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VFIS312309:2:Tyes768931010452
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WSUC273121:0:Tyes----1635-0136711441413-
XAUT78245:1:Tyes---02914-291120729131872915
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XFAS160492:2:Tno---22062213221501896221122102214
XFAS183190:1:Tyes---1220122612280816122412231227
XFAS405440:0:Tno---1302130813100940130613051309
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XORY342109:0:Tyes---1753175917610-175717561760
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YENT393305:1:Tyes3421810110769
YPES187410:5:Tno3421810110769
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YPES386656:2:Tno8791031011452
YPSE273123:2:Tno8791031011452
YPSE349747:2:Tno3421810110769
ZMOB264203:0:Tyes----1262-16060160816391272



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