CANDIDATE ID: 97

CANDIDATE ID: 97

NUMBER OF GENES: 11
AVERAGE SCORE:    9.9953682e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    2.7272727e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G6780 (ddpB) (b1486)
   Products of gene:
     - YDDR-MONOMER (YddR)
     - ABC-59-CPLX (YddO/YddP/YddQ/YddR/YddS ABC transporter)

- G2002 (sapA) (b1294)
   Products of gene:
     - SAPA-MONOMER (SapA)
     - ABC-29-CPLX (peptide uptake ABC transporter)
       Reactions:
        ATP + a peptide[periplasmic space] + H2O  ->  ADP + phosphate + a peptide[cytosol]

- G2001 (sapB) (b1293)
   Products of gene:
     - SAPB-MONOMER (SapB)
     - ABC-29-CPLX (peptide uptake ABC transporter)
       Reactions:
        ATP + a peptide[periplasmic space] + H2O  ->  ADP + phosphate + a peptide[cytosol]

- G2000 (sapC) (b1292)
   Products of gene:
     - SAPC-MONOMER (SapC)
     - ABC-29-CPLX (peptide uptake ABC transporter)
       Reactions:
        ATP + a peptide[periplasmic space] + H2O  ->  ADP + phosphate + a peptide[cytosol]

- EG12628 (dppF) (b3540)
   Products of gene:
     - DPPF-MONOMER (DppF)
     - ABC-8-CPLX (dipeptide ABC transporter)
       Reactions:
        ATP + a dipeptide[periplasmic space] + H2O  ->  ADP + phosphate + a dipeptide[cytosol]

- EG12627 (dppD) (b3541)
   Products of gene:
     - DPPD-MONOMER (DppD)
     - ABC-8-CPLX (dipeptide ABC transporter)
       Reactions:
        ATP + a dipeptide[periplasmic space] + H2O  ->  ADP + phosphate + a dipeptide[cytosol]

- EG12626 (dppC) (b3542)
   Products of gene:
     - DPPC-MONOMER (DppC)
     - ABC-8-CPLX (dipeptide ABC transporter)
       Reactions:
        ATP + a dipeptide[periplasmic space] + H2O  ->  ADP + phosphate + a dipeptide[cytosol]

- EG12625 (dppB) (b3543)
   Products of gene:
     - DPPB-MONOMER (DppB)
     - ABC-8-CPLX (dipeptide ABC transporter)
       Reactions:
        ATP + a dipeptide[periplasmic space] + H2O  ->  ADP + phosphate + a dipeptide[cytosol]

- EG12305 (sapF) (b1290)
   Products of gene:
     - SAPF-MONOMER (SapF)
     - ABC-29-CPLX (peptide uptake ABC transporter)
       Reactions:
        ATP + a peptide[periplasmic space] + H2O  ->  ADP + phosphate + a peptide[cytosol]

- EG12304 (sapD) (b1291)
   Products of gene:
     - SAPD-MONOMER (SapD)
     - ABC-29-CPLX (peptide uptake ABC transporter)
       Reactions:
        ATP + a peptide[periplasmic space] + H2O  ->  ADP + phosphate + a peptide[cytosol]

- EG10248 (dppA) (b3544)
   Products of gene:
     - DPPA-MONOMER (DppA)
     - ABC-8-CPLX (dipeptide ABC transporter)
       Reactions:
        ATP + a dipeptide[periplasmic space] + H2O  ->  ADP + phosphate + a dipeptide[cytosol]



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ORGANISMS CONTAINING AT LEAST 9 GENES FROM THE GROUP:

Total number of orgs: 164
Effective number of orgs (counting one per cluster within 468 clusters): 106

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175811
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295311
YPES386656 ncbi Yersinia pestis Pestoides F11
YPES377628 ncbi Yersinia pestis Nepal51611
YPES360102 ncbi Yersinia pestis Antiqua11
YPES349746 ncbi Yersinia pestis Angola10
YPES214092 ncbi Yersinia pestis CO9211
YPES187410 ncbi Yersinia pestis KIM 1011
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808111
VVUL216895 ncbi Vibrio vulnificus CMCP69
VVUL196600 ncbi Vibrio vulnificus YJ0169
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106339
VFIS312309 ncbi Vibrio fischeri ES1149
VEIS391735 ncbi Verminephrobacter eiseniae EF01-211
VCHO345073 ncbi Vibrio cholerae O3959
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169619
TTHE262724 ncbi Thermus thermophilus HB279
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB49
TSP28240 Thermotoga sp.9
TROS309801 ncbi Thermomicrobium roseum DSM 515910
TMAR243274 ncbi Thermotoga maritima MSB89
TLET416591 ncbi Thermotoga lettingae TMO11
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT211
STRO369723 ncbi Salinispora tropica CNB-44010
STHE292459 ncbi Symbiobacterium thermophilum IAM 1486311
SSP644076 Silicibacter sp. TrichCH4B11
SSP292414 ncbi Ruegeria sp. TM104010
SSON300269 ncbi Shigella sonnei Ss04611
SPRO399741 ncbi Serratia proteamaculans 56811
SMEL266834 ncbi Sinorhizobium meliloti 102111
SMED366394 ncbi Sinorhizobium medicae WSM41911
SLAC55218 Ruegeria lacuscaerulensis11
SHIGELLA ncbi Shigella flexneri 2a str. 2457T11
SGLO343509 ncbi Sodalis glossinidius morsitans11
SFLE373384 ncbi Shigella flexneri 5 str. 840111
SFLE198214 ncbi Shigella flexneri 2a str. 30111
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47611
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6711
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 915011
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1811
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty211
SDYS300267 ncbi Shigella dysenteriae Sd19711
SBOY300268 ncbi Shigella boydii Sb22711
SARE391037 ncbi Salinispora arenicola CNS-20510
RXYL266117 ncbi Rubrobacter xylanophilus DSM 994110
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 1702510
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 1702911
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.111
RRUB269796 ncbi Rhodospirillum rubrum ATCC 1117011
RPOM246200 ncbi Ruegeria pomeroyi DSS-39
RMET266264 ncbi Ralstonia metallidurans CH3410
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 384111
RFER338969 ncbi Rhodoferax ferrireducens T11811
REUT381666 ncbi Ralstonia eutropha H1611
RETL347834 ncbi Rhizobium etli CFN 4211
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30009
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a11
PSP56811 Psychrobacter sp.11
PSP296591 ncbi Polaromonas sp. JS66611
PPUT76869 ncbi Pseudomonas putida GB-111
PPUT351746 ncbi Pseudomonas putida F111
PPUT160488 ncbi Pseudomonas putida KT244011
PPRO298386 ncbi Photobacterium profundum SS99
PMUL272843 ncbi Pasteurella multocida multocida Pm7011
PMEN399739 ncbi Pseudomonas mendocina ymp11
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO111
PFLU220664 ncbi Pseudomonas fluorescens Pf-511
PFLU216595 ncbi Pseudomonas fluorescens SBW2511
PFLU205922 ncbi Pseudomonas fluorescens Pf0-111
PENT384676 ncbi Pseudomonas entomophila L4811
PCRY335284 ncbi Psychrobacter cryohalolentis K511
PAER208964 ncbi Pseudomonas aeruginosa PAO111
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA1411
OIHE221109 ncbi Oceanobacillus iheyensis HTE83111
OANT439375 ncbi Ochrobactrum anthropi ATCC 4918811
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-19
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E11
MSP409 Methylobacterium sp.11
MSP400668 ncbi Marinomonas sp. MWYL111
MSP266779 ncbi Chelativorans sp. BNC111
MLOT266835 ncbi Mesorhizobium loti MAFF30309911
LSPH444177 ncbi Lysinibacillus sphaericus C3-4111
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857811
JSP290400 ncbi Jannaschia sp. CCS19
HPYL357544 ncbi Helicobacter pylori HPAG19
HPY ncbi Helicobacter pylori 266959
HINF71421 ncbi Haemophilus influenzae Rd KW2011
HINF374930 ncbi Haemophilus influenzae PittEE9
HINF281310 ncbi Haemophilus influenzae 86-028NP11
HDUC233412 ncbi Haemophilus ducreyi 35000HP11
HCHE349521 ncbi Hahella chejuensis KCTC 23969
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237799
HACI382638 ncbi Helicobacter acinonychis Sheeba9
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-211
ESP42895 Enterobacter sp.11
EFER585054 ncbi Escherichia fergusonii ATCC 3546911
ECOO157 ncbi Escherichia coli O157:H7 EDL93311
ECOL83334 Escherichia coli O157:H711
ECOL585397 ncbi Escherichia coli ED1a11
ECOL585057 ncbi Escherichia coli IAI3911
ECOL585056 ncbi Escherichia coli UMN02611
ECOL585055 ncbi Escherichia coli 5598911
ECOL585035 ncbi Escherichia coli S8811
ECOL585034 ncbi Escherichia coli IAI111
ECOL481805 ncbi Escherichia coli ATCC 873911
ECOL469008 ncbi Escherichia coli BL21(DE3)11
ECOL439855 ncbi Escherichia coli SMS-3-511
ECOL413997 ncbi Escherichia coli B str. REL60611
ECOL409438 ncbi Escherichia coli SE1111
ECOL405955 ncbi Escherichia coli APEC O111
ECOL364106 ncbi Escherichia coli UTI8911
ECOL362663 ncbi Escherichia coli 53611
ECOL331111 ncbi Escherichia coli E24377A11
ECOL316407 ncbi Escherichia coli K-12 substr. W311011
ECOL199310 ncbi Escherichia coli CFT07311
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104311
DRED349161 ncbi Desulfotomaculum reducens MI-110
DRAD243230 ncbi Deinococcus radiodurans R19
DHAF138119 ncbi Desulfitobacterium hafniense Y5110
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G2010
CVIO243365 ncbi Chromobacterium violaceum ATCC 1247211
CSP501479 Citreicella sp. SE4510
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-290111
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C10
BVIE269482 ncbi Burkholderia vietnamiensis G411
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-279
BTHA271848 ncbi Burkholderia thailandensis E26411
BSUI470137 ncbi Brucella suis ATCC 234459
BSUI204722 ncbi Brucella suis 13309
BSP376 Bradyrhizobium sp.11
BSP36773 Burkholderia sp.11
BPUM315750 ncbi Bacillus pumilus SAFR-03211
BPSE320373 ncbi Burkholderia pseudomallei 66811
BPSE320372 ncbi Burkholderia pseudomallei 1710b11
BPSE272560 ncbi Burkholderia pseudomallei K9624311
BPET94624 Bordetella petrii11
BPAR257311 ncbi Bordetella parapertussis 1282210
BMEL359391 ncbi Brucella melitensis biovar Abortus 230810
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M11
BMAL320389 ncbi Burkholderia mallei NCTC 1024711
BMAL320388 ncbi Burkholderia mallei SAVP111
BMAL243160 ncbi Burkholderia mallei ATCC 2334411
BLIC279010 ncbi Bacillus licheniformis ATCC 1458010
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1109
BHAL272558 ncbi Bacillus halodurans C-12511
BCLA66692 ncbi Bacillus clausii KSM-K1611
BCER288681 ncbi Bacillus cereus E33L9
BCEN331272 ncbi Burkholderia cenocepacia HI242411
BCEN331271 ncbi Burkholderia cenocepacia AU 105411
BCAN483179 ncbi Brucella canis ATCC 233659
BBRO257310 ncbi Bordetella bronchiseptica RB5010
BANT592021 ncbi Bacillus anthracis A024810
BANT568206 ncbi Bacillus anthracis CDC 6849
BANT261594 ncbi Bacillus anthracis Ames Ancestor10
BAMB398577 ncbi Burkholderia ambifaria MC40-611
BAMB339670 ncbi Burkholderia ambifaria AMMD11
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9419
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4499
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL0311
APLE416269 ncbi Actinobacillus pleuropneumoniae L2011
AMET293826 ncbi Alkaliphilus metalliredigens QYMF10
AHYD196024 Aeromonas hydrophila dhakensis9
ACAU438753 ncbi Azorhizobium caulinodans ORS 5719
ABAU360910 ncbi Bordetella avium 197N10


Names of the homologs of the genes in the group in each of these orgs
  G6780   G2002   G2001   G2000   EG12628   EG12627   EG12626   EG12625   EG12305   EG12304   EG10248   
YPSE349747 YPSIP31758_4074YPSIP31758_1784YPSIP31758_1783YPSIP31758_1782YPSIP31758_4071YPSIP31758_4072YPSIP31758_4073YPSIP31758_4074YPSIP31758_1780YPSIP31758_1781YPSIP31758_4075
YPSE273123 YPTB3841YPTB2272YPTB2273YPTB2274YPTB3838YPTB3839YPTB3840YPTB3841YPTB2276YPTB2275YPTB3842
YPES386656 YPDSF_3368YPDSF_0788YPDSF_0787YPDSF_0786YPDSF_3365YPDSF_3366YPDSF_3367YPDSF_3368YPDSF_0784YPDSF_0785YPDSF_3369
YPES377628 YPN_3651YPN_1815YPN_1816YPN_1817YPN_3648YPN_3649YPN_3650YPN_3651YPN_1819YPN_1818YPN_3652
YPES360102 YPA_2952YPA_1704YPA_1705YPA_1706YPA_3826YPA_3827YPA_3828YPA_3829YPA_1708YPA_1707YPA_3830
YPES349746 YPANGOLA_A4039YPANGOLA_A2540YPANGOLA_A2541YPANGOLA_A2542YPANGOLA_A4060YPANGOLA_A4059YPANGOLA_A4058YPANGOLA_A2544YPANGOLA_A2543YPANGOLA_A4056
YPES214092 YPO3450YPO2355YPO2356YPO2357YPO3999YPO4000YPO4001YPO4002YPO2359YPO2358YPO4003
YPES187410 Y0737Y1977Y1976Y1975Y3830Y3829Y3828Y3826Y1973Y1974Y3825
YENT393305 YE0490YE2125YE2126YE2127YE4079YE4080YE4081YE4082YE2129YE2128YE4083
VVUL216895 VV1_2881VV1_2882VV1_2883VV1_3078VV1_3079VV1_1088VV1_2885VV1_2884VV1_2881
VVUL196600 VV1390VV1389VV1388VV1207VV1206VV0046VV1386VV1387VV1390
VPAR223926 VP1171VP1170VP1169VP1343VP1344VP0050VP1167VP1168VP1171
VFIS312309 VFA0309VFA0308VFA0307VF1593VF0691VFA0307VFA0305VFA0306VFA0309
VEIS391735 VEIS_4120VEIS_4121VEIS_4120VEIS_3435VEIS_4962VEIS_1298VEIS_1299VEIS_4120VEIS_4251VEIS_4963VEIS_4591
VCHO345073 VC0395_A1285VC0395_A1286VC0395_A1287VC0395_A0613VC0395_A0612VC0395_A2566VC0395_A1289VC0395_A1288VC0395_A1285
VCHO VC1680VC1681VC1682VC1095VC1094VC0173VC1684VC1683VC1680
TTHE262724 TT_C0972TT_C0971TT_C0972TT_C0973TT_C0102TT_C0101TT_C0973TT_C0972TT_C0971
TTEN273068 TTE1914TTE1915TTE1914TTE2526TTE2525TTE1914TTE0615TTE2525TTE1915
TSP28240 TRQ2_1667TRQ2_1666TRQ2_1667TRQ2_1075TRQ2_0434TRQ2_1667TRQ2_0889TRQ2_1076TRQ2_1666
TROS309801 TRD_1861TRD_A0699TRD_1279TRD_A0701TRD_1630TRD_1629TRD_1280TRD_1861TRD_1629TRD_A0699
TMAR243274 TM_1149TM_1150TM_1149TM_1750TM_0501TM_1149TM_0057TM_1749TM_1150
TLET416591 TLET_0854TLET_0202TLET_0854TLET_0073TLET_0644TLET_0648TLET_0855TLET_0854TLET_1503TLET_0648TLET_0071
STYP99287 STM3629STM1692STM1693STM1694STM3626STM3627STM3628STM3629STM1696STM1695STM3630
STRO369723 STROP_0217STROP_0217STROP_1671STROP_3819STROP_0219STROP_1671STROP_0217STROP_3819STROP_3820STROP_0216
STHE292459 STH2314STH2315STH1108STH2313STH1111STH2824STH2313STH2314STH1111STH1110STH2315
SSP644076 SCH4B_2930SCH4B_2895SCH4B_3822SCH4B_0505SCH4B_3702SCH4B_0504SCH4B_3405SCH4B_3406SCH4B_2892SCH4B_0504SCH4B_2895
SSP292414 TM1040_2715TM1040_2686TM1040_0037TM1040_3601TM1040_3600TM1040_0036TM1040_0037TM1040_2683TM1040_3600TM1040_2686
SSON300269 SSO_1638SSO_1846SSO_1847SSO_1848SSO_3850SSO_3849SSO_3848SSO_3847SSO_1850SSO_1849SSO_3846
SPRO399741 SPRO_2348SPRO_2629SPRO_2630SPRO_2631SPRO_0142SPRO_0141SPRO_0140SPRO_0139SPRO_2633SPRO_2632SPRO_3431
SMEL266834 SMC01526SMC00786SMC00787SMC00788SMC00790SMA1371SMC00788SMC00787SMC00790SMA2081SMC00786
SMED366394 SMED_0330SMED_0329SMED_0330SMED_0331SMED_0333SMED_5064SMED_0331SMED_0330SMED_5077SMED_5789SMED_0329
SLAC55218 SL1157_0096SL1157_0098SL1157_0096SL1157_0095SL1157_0093SL1157_0094SL1157_0095SL1157_0096SL1157_0093SL1157_0094SL1157_0098
SHIGELLA DPPBSAPASAPBSAPCDPPFDPPDDPPCDPPBSAPFSAPDDPPA
SGLO343509 SG0061SG1506SG1507SG1510SG0064SG0063SG0062SG0061SG1512SG1511SG0060
SFLE373384 SFV_3544SFV_1308SFV_1307SFV_1306SFV_3547SFV_3546SFV_1736SFV_3544SFV_1304SFV_1305SFV_3543
SFLE198214 AAN45029.1AAN42910.1AAN42909.1AAN42908.1AAN45026.1AAN45027.1AAN45028.1AAN45029.1AAN42906.1AAN42907.1AAN45030.1
SENT454169 SEHA_C3949SEHA_C1878SEHA_C1879SEHA_C1880SEHA_C3946SEHA_C3947SEHA_C3948SEHA_C3949SEHA_C1882SEHA_C1881SEHA_C3950
SENT321314 SCH_3560SCH_1685SCH_1686SCH_1687SCH_3557SCH_3558SCH_3559SCH_3560SCH_1689SCH_1688SCH_3561
SENT295319 SPA3486SPA1192SPA1191SPA1182SPA3483SPA3484SPA3485SPA3486SPA1180SPA1181SPA3487
SENT220341 STY4169STY1369STY1368STY1357STY4172STY4171STY4170STY4169STY1355STY1356STY4168
SENT209261 T3886T1597T1598T1608T3889T3888T3887T3886T1610T1609T3885
SDYS300267 SDY_4566SDY_1638SDY_1639SDY_1379SDY_4563SDY_4564SDY_4565SDY_4566SDY_1377SDY_1378SDY_4567
SBOY300268 SBO_1571SBO_1768SBO_1769SBO_1770SBO_3539SBO_3540SBO_3541SBO_3542SBO_1772SBO_1771SBO_1768
SARE391037 SARE_1662SARE_0256SARE_1663SARE_4209SARE_0258SARE_1663SARE_0256SARE_4209SARE_4210SARE_0255
RXYL266117 RXYL_2423RXYL_2424RXYL_3026RXYL_2422RXYL_0876RXYL_0875RXYL_2422RXYL_2423RXYL_3025RXYL_2424
RSPH349102 RSPH17025_3964RSPH17025_3963RSPH17025_3964RSPH17025_3965RSPH17025_3967RSPH17025_3966RSPH17025_3965RSPH17025_3964RSPH17025_3967RSPH17025_3963
RSPH349101 RSPH17029_3970RSPH17029_3969RSPH17029_3970RSPH17029_3971RSPH17029_3973RSPH17029_4157RSPH17029_3971RSPH17029_3970RSPH17029_3973RSPH17029_4157RSPH17029_3969
RSPH272943 RSP_3232RSP_3231RSP_3232RSP_3233RSP_3236RSP_3235RSP_3233RSP_3232RSP_3236RSP_3235RSP_3231
RRUB269796 RRU_A2357RRU_A2356RRU_A2357RRU_A2358RRU_A2360RRU_A2359RRU_A2358RRU_A2357RRU_A2360RRU_A2359RRU_A2356
RPOM246200 SPO_1544SPO_2554SPO_1544SPO_1545SPO_3778SPO_1545SPO_1544SPO_2551SPO_2554
RMET266264 RMET_1409RMET_1408RMET_3157RMET_4577RMET_4580RMET_5091RMET_3156RMET_4576RMET_4579RMET_1408
RLEG216596 RL0779RL0778RL0779RL0780RL0782RL0781RL0780RL0779RL0782RL0781RL0778
RFER338969 RFER_1953RFER_1949RFER_1953RFER_1952RFER_1950RFER_1951RFER_1952RFER_1953RFER_1950RFER_1951RFER_1949
REUT381666 H16_A2099H16_A3298H16_A3297H16_A2098H16_B0716H16_B1125H16_A2098H16_B0720H16_B2463H16_A1303H16_A2100
RETL347834 RHE_CH03993RHE_CH00736RHE_CH00737RHE_CH00738RHE_CH00740RHE_CH00739RHE_CH00738RHE_CH00737RHE_CH00740RHE_CH00739RHE_CH00736
PSYR223283 PSPTO_4562PSPTO_4557PSPTO_4562PSPTO_4563PSPTO_4564PSPTO_4563PSPTO_4562PSPTO_4564PSPTO_4559
PSYR205918 PSYR_4239PSYR_4235PSYR_4239PSYR_4240PSYR_4242PSYR_4241PSYR_4240PSYR_4239PSYR_4242PSYR_4241PSYR_4236
PSP56811 PSYCPRWF_1527PSYCPRWF_1526PSYCPRWF_1527PSYCPRWF_1528PSYCPRWF_1530PSYCPRWF_1529PSYCPRWF_1528PSYCPRWF_1527PSYCPRWF_1530PSYCPRWF_1529PSYCPRWF_1526
PSP296591 BPRO_2812BPRO_2816BPRO_2812BPRO_2813BPRO_2815BPRO_2814BPRO_2813BPRO_2812BPRO_2815BPRO_2814BPRO_2816
PPUT76869 PPUTGB1_0924PPUTGB1_0928PPUTGB1_0924PPUTGB1_0923PPUTGB1_0921PPUTGB1_0922PPUTGB1_0923PPUTGB1_0924PPUTGB1_0921PPUTGB1_0922PPUTGB1_0928
PPUT351746 PPUT_0920PPUT_0924PPUT_0920PPUT_0919PPUT_0917PPUT_0918PPUT_0919PPUT_0920PPUT_0917PPUT_0918PPUT_0924
PPUT160488 PP_0881PP_0885PP_0881PP_0880PP_0878PP_0879PP_0880PP_0881PP_0878PP_0879PP_0885
PPRO298386 PBPRA2441PBPRA2442PBPRA2443PBPRA2934PBPRA2935PBPRA2443PBPRA2445PBPRA2444PBPRA2441
PMUL272843 PM0237PM0911PM0912PM0913PM0240PM0239PM0238PM0237PM0915PM0914PM0236
PMEN399739 PMEN_0840PMEN_0841PMEN_0840PMEN_0839PMEN_0837PMEN_0838PMEN_0839PMEN_0840PMEN_0837PMEN_0838PMEN_0845
PLUM243265 PLU0301PLU2587PLU2588PLU2589PLU0304PLU0303PLU0302PLU0301PLU2591PLU2590PLU0300
PFLU220664 PFL_4025PFL_0881PFL_0877PFL_0876PFL_0874PFL_0875PFL_0876PFL_0877PFL_0874PFL_0875PFL_0881
PFLU216595 PFLU0822PFLU0827PFLU0822PFLU0821PFLU0819PFLU0820PFLU0821PFLU0822PFLU0819PFLU0820PFLU0827
PFLU205922 PFL_0812PFL_0816PFL_0812PFL_0811PFL_0809PFL_0810PFL_0811PFL_0812PFL_0809PFL_0810PFL_0816
PENT384676 PSEEN1056PSEEN1060PSEEN1056PSEEN1055PSEEN1053PSEEN1054PSEEN1055PSEEN1056PSEEN1053PSEEN1054PSEEN1060
PCRY335284 PCRYO_0758PCRYO_0759PCRYO_0758PCRYO_0757PCRYO_0755PCRYO_0756PCRYO_0757PCRYO_0758PCRYO_0755PCRYO_0756PCRYO_0759
PAER208964 PA4503PA4500PA4503PA4504PA4506PA4505PA4504PA4503PA4506PA4505PA4502
PAER208963 PA14_58440PA14_58390PA14_58440PA14_58450PA14_58490PA14_58470PA14_58450PA14_58440PA14_58490PA14_58470PA14_58420
OIHE221109 OB2450OB2451OB2450OB2449OB2452OB3069OB2449OB2450OB2614OB3069OB2451
OANT439375 OANT_1583OANT_1582OANT_1583OANT_1584OANT_1586OANT_1585OANT_1584OANT_1583OANT_1586OANT_1585OANT_4405
MVAN350058 MVAN_3774MVAN_3774MVAN_3775MVAN_0434MVAN_1021MVAN_3775MVAN_3774MVAN_0434MVAN_0435
MSUC221988 MS1367MS0856MS0855MS0854MS1364MS1365MS1366MS1367MS0852MS0853MS2053
MSP409 M446_1691M446_1690M446_1691M446_1692M446_1694M446_1693M446_1692M446_1691M446_1694M446_1693M446_1690
MSP400668 MMWYL1_0113MMWYL1_0114MMWYL1_0113MMWYL1_0112MMWYL1_0110MMWYL1_0111MMWYL1_0112MMWYL1_0113MMWYL1_3820MMWYL1_0111MMWYL1_0114
MSP266779 MESO_0066MESO_0067MESO_0066MESO_0065MESO_0063MESO_0064MESO_0065MESO_0066MESO_0063MESO_2384MESO_0067
MLOT266835 MLR6671MLR5416MLR5417MLR5418MLR5420MLR5419MLR5418MLR5417MLR5420MLL0596MLR5416
LSPH444177 BSPH_0319BSPH_0318BSPH_0319BSPH_0320BSPH_2217BSPH_4235BSPH_0320BSPH_0319BSPH_2217BSPH_0316BSPH_0318
KPNE272620 GKPORF_B3251GKPORF_B0330GKPORF_B0329GKPORF_B0316GKPORF_B3248GKPORF_B3249GKPORF_B3250GKPORF_B3251GKPORF_B0314GKPORF_B0315GKPORF_B3252
JSP290400 JANN_2045JANN_2045JANN_4129JANN_4132JANN_4131JANN_4129JANN_4130JANN_3293JANN_4131
HPYL357544 HPAG1_0301HPAG1_0300HPAG1_0301HPAG1_0302HPAG1_0304HPAG1_0302HPAG1_0301HPAG1_0304HPAG1_0300
HPY HP0299HP0298HP0299HP0300HP0302HP0300HP0299HP0302HP0298
HINF71421 HI_1187HI_1638HI_1639HI_1640HI_1184HI_1185HI_1186HI_1187HI_1642HI_1641HI_0853
HINF374930 CGSHIEE_05880CGSHIEE_05885CGSHIEE_06120CGSHIEE_06130CGSHIEE_06125CGSHIEE_06120CGSHIEE_05905CGSHIEE_05900CGSHIEE_07775
HINF281310 NTHI1357NTHI1401NTHI1400NTHI1399NTHI1353NTHI1354NTHI1355NTHI1357NTHI1397NTHI1398NTHI1021
HDUC233412 HD_0312HD_1230HD_1231HD_1232HD_0316HD_0315HD_0313HD_0312HD_0863HD_1235HD_0215
HCHE349521 HCH_00012HCH_00013HCH_00011HCH_00699HCH_01831HCH_01832HCH_00012HCH_01831HCH_00013
HAUR316274 HAUR_1606HAUR_1605HAUR_1606HAUR_3497HAUR_3498HAUR_1607HAUR_1606HAUR_3498HAUR_1605
HACI382638 HAC_0560HAC_0559HAC_0560HAC_0561HAC_0563HAC_0561HAC_0560HAC_0563HAC_0559
GTHE420246 GTNG_0479GTNG_0478GTNG_0479GTNG_0480GTNG_3281GTNG_3282GTNG_0480GTNG_0479GTNG_0477GTNG_3282GTNG_0478
ESP42895 ENT638_1104ENT638_2171ENT638_2172ENT638_2173ENT638_0188ENT638_0187ENT638_0186ENT638_0185ENT638_2175ENT638_2174ENT638_2107
EFER585054 EFER_3540EFER_1660EFER_1661EFER_1662EFER_3537EFER_3538EFER_3539EFER_3540EFER_1664EFER_1663EFER_3541
ECOO157 Z2224SAPASAPBSAPCDPPFDPPDDPPCDPPBSAPFSAPDDPPA
ECOL83334 ECS2090ECS1871ECS1870ECS1869ECS4420ECS4421ECS4422ECS4423ECS1867ECS1868ECS4424
ECOL585397 ECED1_4222ECED1_1509ECED1_1508ECED1_1507ECED1_4219ECED1_4220ECED1_4221ECED1_4222ECED1_1505ECED1_1506ECED1_4223
ECOL585057 ECIAI39_1750ECIAI39_1645ECIAI39_1644ECIAI39_1643ECIAI39_4049ECIAI39_4050ECIAI39_4051ECIAI39_4052ECIAI39_1641ECIAI39_1642ECIAI39_4053
ECOL585056 ECUMN_1740ECUMN_1599ECUMN_1598ECUMN_1597ECUMN_4050ECUMN_4051ECUMN_4052ECUMN_4053ECUMN_1595ECUMN_1596ECUMN_4055
ECOL585055 EC55989_1618EC55989_1456EC55989_1455EC55989_1454EC55989_3991EC55989_3992EC55989_3993EC55989_3994EC55989_1452EC55989_1453EC55989_3996
ECOL585035 ECS88_3963ECS88_1440ECS88_1439ECS88_1438ECS88_3960ECS88_3961ECS88_3962ECS88_3963ECS88_1436ECS88_1437ECS88_3964
ECOL585034 ECIAI1_1496ECIAI1_1319ECIAI1_1318ECIAI1_1317ECIAI1_3698ECIAI1_3699ECIAI1_3700ECIAI1_3701ECIAI1_1315ECIAI1_1316ECIAI1_3703
ECOL481805 ECOLC_2171ECOLC_2331ECOLC_2332ECOLC_2333ECOLC_0175ECOLC_0174ECOLC_0173ECOLC_0172ECOLC_2335ECOLC_2334ECOLC_0171
ECOL469008 ECBD_2153ECBD_2323ECBD_2324ECBD_2325ECBD_0196ECBD_0195ECBD_0194ECBD_0193ECBD_2327ECBD_2326ECBD_0192
ECOL439855 ECSMS35_1687ECSMS35_1828ECSMS35_1829ECSMS35_1830ECSMS35_3859ECSMS35_3860ECSMS35_3861ECSMS35_3862ECSMS35_1832ECSMS35_1831ECSMS35_3863
ECOL413997 ECB_01444ECB_01271ECB_01270ECB_01269ECB_03391ECB_03392ECB_03393ECB_03394ECB_01267ECB_01268ECB_03395
ECOL409438 ECSE_1576ECSE_1346ECSE_1345ECSE_1344ECSE_3813ECSE_3814ECSE_3815ECSE_3816ECSE_1342ECSE_1343ECSE_3817
ECOL405955 APECO1_2905APECO1_457APECO1_456APECO1_455APECO1_2908APECO1_2907APECO1_2906APECO1_2905APECO1_453APECO1_454APECO1_2904
ECOL364106 UTI89_C4081UTI89_C1571UTI89_C1570UTI89_C1569UTI89_C4078UTI89_C4079UTI89_C4080UTI89_C4081UTI89_C1567UTI89_C1568UTI89_C4082
ECOL362663 ECP_3644ECP_1352ECP_1351ECP_1350ECP_3641ECP_3642ECP_3643ECP_3644ECP_1348ECP_1349ECP_3646
ECOL331111 ECE24377A_1675ECE24377A_1501ECE24377A_1500ECE24377A_1499ECE24377A_4032ECE24377A_4033ECE24377A_4034ECE24377A_4035ECE24377A_1497ECE24377A_1498ECE24377A_4037
ECOL316407 ECK1480:JW1481:B1486ECK1289:JW1287:B1294ECK1288:JW1286:B1293ECK1287:JW1285:B1292ECK3527:JW3509:B3540ECK3528:JW3510:B3541ECK3529:JW3511:B3542ECK3530:JW3512:B3543ECK1285:JW1283:B1290ECK1286:JW1284:B1291ECK3531:JW3513:B3544
ECOL199310 C4358C1771C1770C1769C4355C4356C4357C4358C1767C1768C4361
ECAR218491 ECA4075ECA1977ECA1976ECA1975ECA4390ECA4391ECA4392ECA4393ECA1973ECA1974ECA4394
DRED349161 DRED_0390DRED_2454DRED_2453DRED_2452DRED_2450DRED_2451DRED_2452DRED_2453DRED_2451DRED_2454
DRAD243230 DR_0959DR_1290DR_0959DR_0958DR_1567DR_1568DR_0958DR_0959DR_1290
DHAF138119 DSY0503DSY0502DSY0503DSY0504DSY0506DSY0505DSY4357DSY0503DSY0646DSY0502
DDES207559 DDE_1184DDE_1185DDE_1184DDE_1183DDE_1181DDE_1182DDE_1183DDE_1184DDE_1182DDE_1185
CVIO243365 CV_1098CV_1097CV_1098CV_1099CV_1101CV_1100CV_1099CV_1098CV_1101CV_1100CV_1097
CSP501479 CSE45_2493CSE45_3619CSE45_2493CSE45_4964CSE45_4845CSE45_2494CSE45_4965CSE45_3616CSE45_1135CSE45_3619
CHYD246194 CHY_1129CHY_1128CHY_1129CHY_1130CHY_1127CHY_1126CHY_1130CHY_1129CHY_1127CHY_1126CHY_1128
CDES477974 DAUD_0386DAUD_1982DAUD_0386DAUD_0387DAUD_0389DAUD_0388DAUD_0387DAUD_0386DAUD_0388DAUD_1982
BVIE269482 BCEP1808_3129BCEP1808_3130BCEP1808_3129BCEP1808_3128BCEP1808_3126BCEP1808_3127BCEP1808_3128BCEP1808_3129BCEP1808_3126BCEP1808_3127BCEP1808_3130
BTHU281309 BT9727_4233BT9727_4232BT9727_4235BT9727_4234BT9727_4232BT9727_4233BT9727_0570BT9727_0571BT9727_4231
BTHA271848 BTH_I0221BTH_I0220BTH_I0221BTH_I0222BTH_I0224BTH_I0223BTH_I0222BTH_I0221BTH_I0224BTH_I0223BTH_I0220
BSUI470137 BSUIS_A1640BSUIS_A1640BSUIS_A1639BSUIS_A1638BSUIS_B1089BSUIS_A1639BSUIS_A1640BSUIS_A1638BSUIS_B1089
BSUI204722 BR_1585BR_1585BR_1584BR_1582BR_A1094BR_1584BR_1585BR_1582BR_A1094
BSP376 BRADO6822BRADO1743BRADO1742BRADO1741BRADO1739BRADO1740BRADO1741BRADO1742BRADO1739BRADO1740BRADO1743
BSP36773 BCEP18194_A6391BCEP18194_B2067BCEP18194_A6391BCEP18194_A6390BCEP18194_A6388BCEP18194_A6389BCEP18194_A6390BCEP18194_A6391BCEP18194_A6388BCEP18194_A6389BCEP18194_B2067
BPUM315750 BPUM_0822BPUM_0821BPUM_0822BPUM_0823BPUM_1061BPUM_1060BPUM_0823BPUM_0822BPUM_0820BPUM_1060BPUM_0821
BPSE320373 BURPS668_0244BURPS668_0243BURPS668_0244BURPS668_0245BURPS668_0247BURPS668_0246BURPS668_0245BURPS668_0244BURPS668_0247BURPS668_0246BURPS668_0243
BPSE320372 BURPS1710B_A0462BURPS1710B_A0461BURPS1710B_A0462BURPS1710B_A0463BURPS1710B_A0465BURPS1710B_A0464BURPS1710B_A0463BURPS1710B_A0462BURPS1710B_A0465BURPS1710B_A0464BURPS1710B_A0461
BPSE272560 BPSL0250BPSL0249BPSL0250BPSL0251BPSL0253BPSL0252BPSL0251BPSL0250BPSL0253BPSL0252BPSL0249
BPET94624 BPET1795BPET3079BPET1795BPET2850BPET0286BPET0285BPET2850BPET2851BPET3872BPET0285BPET1794
BPAR257311 BPP3260BPP3261BPP3260BPP1445BPP3589BPP4126BPP1445BPP3260BPP3590BPP3261
BMEL359391 BAB1_1599BAB1_1599BAB1_1598BAB1_1596BAB2_1052BAB1_1598BAB1_1599BAB1_1596BAB2_1052BAB1_1600
BMEL224914 BMEI0435BMEI0433BMEI0435BMEI0436BMEI0438BMEII0206BMEI0436BMEI0435BMEI0438BMEII0206BMEI0433
BMAL320389 BMA10247_3377BMA10247_3378BMA10247_3377BMA10247_A1048BMA10247_3374BMA10247_3375BMA10247_A1048BMA10247_3377BMA10247_3374BMA10247_3375BMA10247_3378
BMAL320388 BMASAVP1_A2970BMASAVP1_A2969BMASAVP1_A2970BMASAVP1_0249BMASAVP1_A2973BMASAVP1_A2972BMASAVP1_0249BMASAVP1_A2970BMASAVP1_A2973BMASAVP1_A2972BMASAVP1_A2969
BMAL243160 BMA_3302BMA_3301BMA_3302BMA_A1276BMA_3305BMA_3304BMA_A1276BMA_3302BMA_3305BMA_3304BMA_3301
BLIC279010 BL03047BL03046BL03047BL03048BL03317BL03044BL03048BL03047BL03044BL03046
BJAP224911 BLR1037BLR1037BLL2866BLR1357BLR3344BLL2866BLR3342BLL6709BLR3344
BHAL272558 BH3643BH3644BH3643BH3642BH3645BH0350BH3642BH3643BH3645BH0350BH3644
BCLA66692 ABC1241ABC1240ABC0565ABC1242ABC0568ABC3658ABC1242ABC1241ABC1606ABC0567ABC1240
BCER288681 BCE33L4245BCE33L4244BCE33L4247BCE33L4246BCE33L4244BCE33L4245BCE33L0213BCE33L0570BCE33L4243
BCEN331272 BCEN2424_3044BCEN2424_4016BCEN2424_3044BCEN2424_3043BCEN2424_3041BCEN2424_3042BCEN2424_3043BCEN2424_3044BCEN2424_3041BCEN2424_3042BCEN2424_3045
BCEN331271 BCEN_2430BCEN_4350BCEN_2430BCEN_2429BCEN_2427BCEN_2428BCEN_2429BCEN_2430BCEN_2427BCEN_2428BCEN_2431
BCAN483179 BCAN_A1620BCAN_A1620BCAN_A1619BCAN_A1617BCAN_B1116BCAN_A1619BCAN_A1620BCAN_A1617BCAN_B1116
BBRO257310 BB3711BB3712BB3711BB2519BB4024BB4596BB2519BB3711BB4025BB3712
BANT592021 BAA_4748BAA_4746BAA_4747BAA_4750BAA_4749BAA_4747BAA_4748BAA_0263BAA_0743BAA_4746
BANT568206 BAMEG_4767BAMEG_4766BAMEG_4769BAMEG_4768BAMEG_4766BAMEG_4767BAMEG_0261BAMEG_3927BAMEG_4765
BANT261594 GBAA4732GBAA4729GBAA4731GBAA4734GBAA4733GBAA4731GBAA4732GBAA0235GBAA0660GBAA4729
BAMB398577 BAMMC406_2955BAMMC406_3923BAMMC406_2955BAMMC406_2954BAMMC406_2952BAMMC406_2953BAMMC406_2954BAMMC406_2955BAMMC406_2952BAMMC406_2953BAMMC406_3923
BAMB339670 BAMB_3089BAMB_3416BAMB_3089BAMB_3088BAMB_3086BAMB_3087BAMB_3088BAMB_3089BAMB_3086BAMB_3087BAMB_3416
BABO262698 BRUAB1_1572BRUAB1_1572BRUAB1_1571BRUAB1_1569BRUAB2_1033BRUAB1_1571BRUAB1_1572BRUAB1_1569BRUAB2_1033
ASAL382245 ASA_2427ASA_2428ASA_2429ASA_1702ASA_0884ASA_0989ASA_2431ASA_2430ASA_2427
APLE434271 APJL_0065APJL_0064APJL_0801APJL_0800APJL_0068APJL_0067APJL_0066APJL_0065APJL_1260APJL_0799APJL_0866
APLE416269 APL_0065APL_0064APL_0795APL_0794APL_0068APL_0067APL_0066APL_0065APL_1249APL_0793APL_2010
AMET293826 AMET_2908AMET_2909AMET_2908AMET_2006AMET_2905AMET_2064AMET_1878AMET_2908AMET_2064AMET_2909
AHYD196024 AHA_1876AHA_1875AHA_1874AHA_2609AHA_3429AHA_1874AHA_1872AHA_1873AHA_1876
ACAU438753 AZC_1512AZC_0775AZC_0774AZC_2011AZC_2012AZC_2993AZC_2994AZC_0808AZC_2908
ABAU360910 BAV1160BAV1159BAV1160BAV1646BAV2800BAV0998BAV1646BAV1645BAV0998BAV1159


Organism features enriched in list (features available for 152 out of the 164 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.006514039112
Disease:Brucellosis 0.001146855
Disease:Bubonic_plague 0.000291766
Disease:Dysentery 0.000291766
Disease:Gastroenteritis 0.00014081013
Endospores:No 2.155e-926211
GC_Content_Range4:0-40 5.669e-1518213
GC_Content_Range4:40-60 0.000014180224
GC_Content_Range4:60-100 0.000215754145
GC_Content_Range7:30-40 1.624e-818166
GC_Content_Range7:50-60 1.464e-648107
GC_Content_Range7:60-70 0.000037153134
Genome_Size_Range5:0-2 1.991e-148155
Genome_Size_Range5:2-4 9.118e-826197
Genome_Size_Range5:4-6 1.824e-1588184
Genome_Size_Range5:6-10 1.121e-83047
Genome_Size_Range9:1-2 1.744e-108128
Genome_Size_Range9:2-3 5.748e-810120
Genome_Size_Range9:4-5 2.320e-74696
Genome_Size_Range9:5-6 1.067e-64288
Genome_Size_Range9:6-8 2.257e-102838
Gram_Stain:Gram_Neg 3.451e-12122333
Gram_Stain:Gram_Pos 0.000024321150
Habitat:Aquatic 0.00168671391
Habitat:Multiple 0.003115259178
Motility:No 1.628e-815151
Motility:Yes 1.399e-899267
Oxygen_Req:Anaerobic 1.676e-69102
Oxygen_Req:Facultative 7.544e-777201
Pathogenic_in:Animal 0.00453242666
Pathogenic_in:Human 0.004092668213
Pathogenic_in:No 0.008198148226
Shape:Coccus 1.284e-8382
Shape:Rod 9.871e-13126347



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ORGANISMS CONTAINING AT MOST 2 GENES FROM THE GROUP:

Total number of orgs: 355
Effective number of orgs (counting one per cluster within 468 clusters): 272

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS11
TTUR377629 ncbi Teredinibacter turnerae T79010
TSP1755 Thermoanaerobacter sp.1
TPEN368408 ncbi Thermofilum pendens Hrk 51
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX1
TERY203124 ncbi Trichodesmium erythraeum IMS1011
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252591
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SGOR29390 Streptococcus gordonii Challis0
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SELO269084 ncbi Synechococcus elongatus PCC 63011
SDEG203122 ncbi Saccharophagus degradans 2-400
SAUR93062 ncbi Staphylococcus aureus aureus COL2
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83252
SAUR426430 ncbi Staphylococcus aureus aureus Newman2
SAUR418127 ncbi Staphylococcus aureus aureus Mu32
SAUR367830 Staphylococcus aureus aureus USA3002
SAUR359787 ncbi Staphylococcus aureus aureus JH12
SAUR359786 ncbi Staphylococcus aureus aureus JH92
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4762
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2522
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3152
SAUR158878 ncbi Staphylococcus aureus aureus Mu502
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP101510 ncbi Rhodococcus jostii RHA12
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI2
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP117 Pirellula sp.2
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PINT246198 Prevotella intermedia 170
PGIN242619 ncbi Porphyromonas gingivalis W830
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCAR338963 ncbi Pelobacter carbinolicus DSM 23802
PAST100379 Onion yellows phytoplasma0
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM22
PACN267747 ncbi Propionibacterium acnes KPA1712022
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.2
NSP103690 ncbi Nostoc sp. PCC 71202
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NMUL323848 ncbi Nitrosospira multiformis ATCC 251961
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101521
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197181
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM11
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT81
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-31
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53341
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby1
LPNE297246 ncbi Legionella pneumophila Paris1
LPNE297245 ncbi Legionella pneumophila Lens1
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 11
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMON265669 ncbi Listeria monocytogenes 4b F23651
LMON169963 ncbi Listeria monocytogenes EGD-e1
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-002
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112621
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCHO395495 ncbi Leptothrix cholodnii SP-60
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP375286 ncbi Janthinobacterium sp. Marseille1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HNEP81032 Hyphomonas neptunium0
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HBUT415426 ncbi Hyperthermus butylicus DSM 54561
HARS204773 ncbi Herminiimonas arsenicoxydans1
GOXY290633 ncbi Gluconobacter oxydans 621H0
GKAU235909 ncbi Geobacillus kaustophilus HTA4262
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH11
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec2
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FMAG334413 ncbi Finegoldia magna ATCC 293281
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5832
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DSHI398580 ncbi Dinoroseobacter shibae DFL 121
DPSY177439 ncbi Desulfotalea psychrophila LSv541
DOLE96561 ncbi Desulfococcus oleovorans Hxd32
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DARO159087 ncbi Dechloromonas aromatica RCB2
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E881
CTEP194439 ncbi Chlorobium tepidum TLS2
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg2
CPER289380 ncbi Clostridium perfringens SM1012
CPER195103 ncbi Clostridium perfringens ATCC 131242
CPER195102 ncbi Clostridium perfringens 132
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CJAP155077 Cellvibrio japonicus0
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6302
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD31
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto2
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6572
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B1
CBOT441771 ncbi Clostridium botulinum A str. Hall2
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193972
CBOT36826 Clostridium botulinum A2
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB150
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1002
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294132
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN12
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP1667 Arthrobacter sp.0
APHA212042 ncbi Anaplasma phagocytophilum HZ0
ANAE240017 Actinomyces oris MG10
AMAR329726 ncbi Acaryochloris marina MBIC110171
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232702
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
AAUR290340 ncbi Arthrobacter aurescens TC10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G6780   G2002   G2001   G2000   EG12628   EG12627   EG12626   EG12625   EG12305   EG12304   EG10248   
ZMOB264203
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
WSUC273121
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TVOL273116 TVN1329
TTUR377629
TSP1755 TETH514_0550
TPEN368408 TPEN_1634
TPAL243276
TKOD69014
TFUS269800 TFU_1819
TERY203124 TERY_1382
TELO197221 TLR1197
TDEN326298
TDEN292415 TBD_1668
TACI273075
SWOL335541
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471
SSP321332
SSP321327
SSP1148
SSP1131
SSOL273057
SSAP342451
SRUB309807
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SHAE279808 SH1967
SGOR29390
SEPI176280
SEPI176279
SELO269084 SYC0718_C
SDEG203122
SAUR93062 SACOL0998SACOL0998
SAUR93061 SAOUHSC_00930SAOUHSC_00930
SAUR426430 NWMN_0863NWMN_0863
SAUR418127 SAHV_0988SAHV_0988
SAUR367830 SAUSA300_0894SAUSA300_0894
SAUR359787 SAURJH1_1011SAURJH1_1011
SAUR359786 SAURJH9_0992SAURJH9_0992
SAUR282459 SAS0863SAS0863
SAUR282458 SAR0958SAR0958
SAUR273036
SAUR196620 MW0875
SAUR158879 SA0852SA0852
SAUR158878 SAV0993SAV0993
SALA317655
SAGA211110
SAGA208435
SAGA205921
SACI330779 SACI_1035
RTYP257363
RSP101510 RHA1_RO03931RHA1_RO09045
RSAL288705
RRIC452659
RRIC392021
RPRO272947
RPAL316055
RMAS416276
RFEL315456
RDEN375451
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438 PTH_0941PTH_0941
PSTU379731
PSP312153
PSP117 RB12858RB12859
PRUM264731
PPEN278197
PMAR93060
PMAR74547
PMAR74546
PMAR59920 PMN2A_0705
PMAR167555 NATL1_15391
PMAR167546
PMAR167542 P9515ORF_1189
PMAR167540
PMAR167539
PMAR146891
PISL384616 PISL_0562
PINT246198
PGIN242619
PDIS435591
PCAR338963 PCAR_0906PCAR_1867
PAST100379
PARC259536
PAER178306 PAE3316PAE1297
PACN267747 PPA2064PPA2156
OTSU357244
NWIN323098
NSP387092
NSP35761 NOCA_2403NOCA_2402
NSP103690 ALR0141ALL2011
NSEN222891
NPHA348780 NP3582A
NMUL323848 NMUL_A2331
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NFAR247156 NFA1670
NEUT335283
NEUR228410 NE2480
NARO279238
MTUB419947
MTUB336982
MTHE349307
MTHE264732
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSED399549 MSED_1049
MPUL272635
MPNE272634
MPET420662 MPE_A3118
MPEN272633
MMYC272632
MMOB267748
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_0210
MGEN243273
MFLO265311
MEXT419610
MCAP340047
MCAP243233
MBUR259564
MBOV410289
MBOV233413
MAVI243243
MART243272
MAQU351348 MAQU_0452
MAER449447
MAEO419665 MAEO_0511
MABS561007
LXYL281090
LWEL386043 LWE0118
LSAK314315 LSA0706
LREU557436
LPNE400673 LPC_2602
LPNE297246 LPP0747
LPNE297245 LPL0728
LPNE272624 LPG0692
LPLA220668 LP_1265
LMON265669 LMOF2365_0154
LMON169963 LMO0136
LMES203120
LLAC272623
LLAC272622
LJOH257314 LJ_1526
LINT363253 LI0250LI0250
LINT267671
LINT189518
LINN272626 LIN0183
LHEL405566
LGAS324831 LGAS_0775
LDEL390333 LDB1385
LDEL321956 LBUL_1292
LCHO395495
LCAS321967
LBRE387344 LVIS_1765
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
JSP375286 MMA_3521
IHOS453591
HNEP81032
HMOD498761
HHEP235279
HHAL349124
HBUT415426 HBUT_0606
HARS204773 HEAR3292
GOXY290633
GKAU235909 GK0469GK0469
GFOR411154
GBET391165 GBCGDNIH1_0125
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855 FRANEAN1_3461FRANEAN1_3461
FSP106370
FRANT
FPHI484022
FMAG334413 FMG_0271
FJOH376686
ERUM302409
ERUM254945
ELIT314225
EFAE226185 EF_0912EF_3110
ECHA205920
ECAN269484
DSP255470 CBDBA1034
DSP216389 DEHABAV1_0939
DSHI398580 DSHI_0884
DPSY177439 DP0150
DOLE96561 DOLE_0941DOLE_0941
DNOD246195
DETH243164
DARO159087 DARO_1319DARO_1319
CVES412965
CTRA471473
CTRA471472
CTET212717 CTC_01377
CTEP194439 CT_0655CT_1364
CSUL444179
CSP78
CRUT413404
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809 CPHY_0816CPHY_1998
CPER289380 CPR_2258CPR_2254
CPER195103 CPF_2555CPF_2551
CPER195102 CPE2273CPE2269
CPEL335992
CNOV386415 NT01CX_1743
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948 CMAQ_1327
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CJAP155077
CHUT269798
CHOM360107
CGLU196627
CFET360106
CFEL264202
CEFF196164
CDIP257309
CDIF272563 CD2670CD2671
CCUR360105
CCON360104
CCHL340177 CAG_1883
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT536232 CLM_1382CLM_1382
CBOT515621 CLJ_B1267CLJ_B1267
CBOT508765 CLL_A2489
CBOT441771 CLC_1267CLC_1267
CBOT441770 CLB_1255CLB_1255
CBOT36826 CBO1226CBO1226
CBLO291272
CBLO203907
CAULO
CABO218497
BTUR314724
BTHE226186
BSP107806
BLON206672 BL1346
BHER314723
BGAR290434
BFRA295405
BFRA272559
BCIC186490
BBUR224326
BBAC264462 BD2190BD2189
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AVAR240292 AVA_1510AVA_0003
AURANTIMONAS
ASP76114 EBA5654EBA5654
ASP62977
ASP62928
ASP1667
APHA212042
ANAE240017
AMAR329726 AM1_4650
AMAR234826
ALAI441768
AFER243159 AFE_0121AFE_0121
AEHR187272
ADEH290397
ACRY349163
ACEL351607
ABUT367737
ABOR393595
AAUR290340
AAEO224324


Organism features enriched in list (features available for 329 out of the 355 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.00441221517
Disease:Pharyngitis 0.009906588
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00171651111
Disease:Wide_range_of_infections 0.00171651111
Disease:bronchitis_and_pneumonitis 0.009906588
Endospores:No 5.221e-6144211
Endospores:Yes 0.00081401953
GC_Content_Range4:0-40 1.768e-17168213
GC_Content_Range4:40-60 0.0000816105224
GC_Content_Range4:60-100 1.232e-755145
GC_Content_Range7:0-30 4.943e-84347
GC_Content_Range7:30-40 2.052e-9125166
GC_Content_Range7:50-60 0.000731346107
GC_Content_Range7:60-70 2.096e-750134
Genome_Size_Range5:0-2 2.788e-20134155
Genome_Size_Range5:2-4 4.987e-8141197
Genome_Size_Range5:4-6 8.786e-2646184
Genome_Size_Range5:6-10 7.784e-9847
Genome_Size_Range9:0-1 1.204e-72727
Genome_Size_Range9:1-2 2.243e-13107128
Genome_Size_Range9:2-3 5.140e-893120
Genome_Size_Range9:4-5 3.495e-83096
Genome_Size_Range9:5-6 1.585e-151688
Genome_Size_Range9:6-8 1.080e-7638
Gram_Stain:Gram_Neg 4.065e-7159333
Gram_Stain:Gram_Pos 0.0001497103150
Habitat:Host-associated 1.072e-6143206
Habitat:Multiple 0.005717888178
Habitat:Terrestrial 0.00322211031
Motility:No 3.480e-10117151
Motility:Yes 1.195e-13107267
Optimal_temp.:30-37 0.00040081718
Oxygen_Req:Facultative 0.001107297201
Pathogenic_in:No 0.0097208116226
Shape:Coccus 1.734e-97082
Shape:Rod 9.398e-17148347
Shape:Sphere 0.00170501719
Shape:Spiral 0.00256912734



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 36
Effective number of orgs (counting one per cluster within 468 clusters): 33

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
TLET416591 ncbi Thermotoga lettingae TMO 1.672e-679911
APER272557 ncbi Aeropyrum pernix K1 0.00001522988
HACI382638 ncbi Helicobacter acinonychis Sheeba 0.00003995079
HPYL357544 ncbi Helicobacter pylori HPAG1 0.00005085219
HPY ncbi Helicobacter pylori 26695 0.00005085219
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-2901 0.0002355125011
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C 0.000551796110
HDUC233412 ncbi Haemophilus ducreyi 35000HP 0.0005785135611
SLAC55218 Ruegeria lacuscaerulensis 0.0008561140511
LSPH444177 ncbi Lysinibacillus sphaericus C3-41 0.0009404141711
STRO369723 ncbi Salinispora tropica CNB-440 0.0012214104210
STHE292459 ncbi Symbiobacterium thermophilum IAM 14863 0.0012405145311
PCRY335284 ncbi Psychrobacter cryohalolentis K5 0.0013180146111
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF8 0.00145213547
SARE391037 ncbi Salinispora arenicola CNS-205 0.0014717106210
PSP56811 Psychrobacter sp. 0.0016132148811
OIHE221109 ncbi Oceanobacillus iheyensis HTE831 0.0017498149911
HMUK485914 ncbi Halomicrobium mukohataei DSM 12286 0.00204535578
SSP644076 Silicibacter sp. TrichCH4B 0.0026043155411
TROS309801 ncbi Thermomicrobium roseum DSM 5159 0.0026330112710
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M 0.0030627157711
HINF281310 ncbi Haemophilus influenzae 86-028NP 0.0031058157911
BHAL272558 ncbi Bacillus halodurans C-125 0.0033531159011
TMAR243274 ncbi Thermotoga maritima MSB8 0.00340948419
BPUM315750 ncbi Bacillus pumilus SAFR-032 0.0035441159811
HINF71421 ncbi Haemophilus influenzae Rd KW20 0.0036937160411
MSP266779 ncbi Chelativorans sp. BNC1 0.0041777162211
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.1 0.0043220162711
TSP28240 Thermotoga sp. 0.00457628709
BCLA66692 ncbi Bacillus clausii KSM-K16 0.0050124164911
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 17029 0.0051827165411
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-2 0.0057635167011
HSAL478009 ncbi Halobacterium salinarum R1 0.00595274367
MACE188937 ncbi Methanosarcina acetivorans C2A 0.00695326538
RRUB269796 ncbi Rhodospirillum rubrum ATCC 11170 0.0074352170911
VEIS391735 ncbi Verminephrobacter eiseniae EF01-2 0.0083463172711


Names of the homologs of the genes in the group in each of these orgs
  G6780   G2002   G2001   G2000   EG12628   EG12627   EG12626   EG12625   EG12305   EG12304   EG10248   
TLET416591 TLET_0854TLET_0202TLET_0854TLET_0073TLET_0644TLET_0648TLET_0855TLET_0854TLET_1503TLET_0648TLET_0071
APER272557 APE0303APE2257APE0303APE1402APE1578APE2258APE1578APE2257
HACI382638 HAC_0560HAC_0559HAC_0560HAC_0561HAC_0563HAC_0561HAC_0560HAC_0563HAC_0559
HPYL357544 HPAG1_0301HPAG1_0300HPAG1_0301HPAG1_0302HPAG1_0304HPAG1_0302HPAG1_0301HPAG1_0304HPAG1_0300
HPY HP0299HP0298HP0299HP0300HP0302HP0300HP0299HP0302HP0298
CHYD246194 CHY_1129CHY_1128CHY_1129CHY_1130CHY_1127CHY_1126CHY_1130CHY_1129CHY_1127CHY_1126CHY_1128
CDES477974 DAUD_0386DAUD_1982DAUD_0386DAUD_0387DAUD_0389DAUD_0388DAUD_0387DAUD_0386DAUD_0388DAUD_1982
HDUC233412 HD_0312HD_1230HD_1231HD_1232HD_0316HD_0315HD_0313HD_0312HD_0863HD_1235HD_0215
SLAC55218 SL1157_0096SL1157_0098SL1157_0096SL1157_0095SL1157_0093SL1157_0094SL1157_0095SL1157_0096SL1157_0093SL1157_0094SL1157_0098
LSPH444177 BSPH_0319BSPH_0318BSPH_0319BSPH_0320BSPH_2217BSPH_4235BSPH_0320BSPH_0319BSPH_2217BSPH_0316BSPH_0318
STRO369723 STROP_0217STROP_0217STROP_1671STROP_3819STROP_0219STROP_1671STROP_0217STROP_3819STROP_3820STROP_0216
STHE292459 STH2314STH2315STH1108STH2313STH1111STH2824STH2313STH2314STH1111STH1110STH2315
PCRY335284 PCRYO_0758PCRYO_0759PCRYO_0758PCRYO_0757PCRYO_0755PCRYO_0756PCRYO_0757PCRYO_0758PCRYO_0755PCRYO_0756PCRYO_0759
CKOR374847 KCR_0930KCR_0510KCR_0930KCR_0931KCR_0930KCR_0932KCR_0929
SARE391037 SARE_1662SARE_0256SARE_1663SARE_4209SARE_0258SARE_1663SARE_0256SARE_4209SARE_4210SARE_0255
PSP56811 PSYCPRWF_1527PSYCPRWF_1526PSYCPRWF_1527PSYCPRWF_1528PSYCPRWF_1530PSYCPRWF_1529PSYCPRWF_1528PSYCPRWF_1527PSYCPRWF_1530PSYCPRWF_1529PSYCPRWF_1526
OIHE221109 OB2450OB2451OB2450OB2449OB2452OB3069OB2449OB2450OB2614OB3069OB2451
HMUK485914 HMUK_0216HMUK_0217HMUK_1596HMUK_0537HMUK_0538HMUK_0216HMUK_0538HMUK_0217
SSP644076 SCH4B_2930SCH4B_2895SCH4B_3822SCH4B_0505SCH4B_3702SCH4B_0504SCH4B_3405SCH4B_3406SCH4B_2892SCH4B_0504SCH4B_2895
TROS309801 TRD_1861TRD_A0699TRD_1279TRD_A0701TRD_1630TRD_1629TRD_1280TRD_1861TRD_1629TRD_A0699
BMEL224914 BMEI0435BMEI0433BMEI0435BMEI0436BMEI0438BMEII0206BMEI0436BMEI0435BMEI0438BMEII0206BMEI0433
HINF281310 NTHI1357NTHI1401NTHI1400NTHI1399NTHI1353NTHI1354NTHI1355NTHI1357NTHI1397NTHI1398NTHI1021
BHAL272558 BH3643BH3644BH3643BH3642BH3645BH0350BH3642BH3643BH3645BH0350BH3644
TMAR243274 TM_1149TM_1150TM_1149TM_1750TM_0501TM_1149TM_0057TM_1749TM_1150
BPUM315750 BPUM_0822BPUM_0821BPUM_0822BPUM_0823BPUM_1061BPUM_1060BPUM_0823BPUM_0822BPUM_0820BPUM_1060BPUM_0821
HINF71421 HI_1187HI_1638HI_1639HI_1640HI_1184HI_1185HI_1186HI_1187HI_1642HI_1641HI_0853
MSP266779 MESO_0066MESO_0067MESO_0066MESO_0065MESO_0063MESO_0064MESO_0065MESO_0066MESO_0063MESO_2384MESO_0067
RSPH272943 RSP_3232RSP_3231RSP_3232RSP_3233RSP_3236RSP_3235RSP_3233RSP_3232RSP_3236RSP_3235RSP_3231
TSP28240 TRQ2_1667TRQ2_1666TRQ2_1667TRQ2_1075TRQ2_0434TRQ2_1667TRQ2_0889TRQ2_1076TRQ2_1666
BCLA66692 ABC1241ABC1240ABC0565ABC1242ABC0568ABC3658ABC1242ABC1241ABC1606ABC0567ABC1240
RSPH349101 RSPH17029_3970RSPH17029_3969RSPH17029_3970RSPH17029_3971RSPH17029_3973RSPH17029_4157RSPH17029_3971RSPH17029_3970RSPH17029_3973RSPH17029_4157RSPH17029_3969
GTHE420246 GTNG_0479GTNG_0478GTNG_0479GTNG_0480GTNG_3281GTNG_3282GTNG_0480GTNG_0479GTNG_0477GTNG_3282GTNG_0478
HSAL478009 OE4552FOE4551FOE4301ROE4317FOE4552FOE4302ROE4551F
MACE188937 MA4250MA4247MA4250MA1246MA0878MA0880MA4250MA3461
RRUB269796 RRU_A2357RRU_A2356RRU_A2357RRU_A2358RRU_A2360RRU_A2359RRU_A2358RRU_A2357RRU_A2360RRU_A2359RRU_A2356
VEIS391735 VEIS_4120VEIS_4121VEIS_4120VEIS_3435VEIS_4962VEIS_1298VEIS_1299VEIS_4120VEIS_4251VEIS_4963VEIS_4591


Organism features enriched in list (features available for 32 out of the 36 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:chronic_bronchitis 0.008318023
Disease:speticemia 0.002923622
Endospores:Yes 0.0040090853
Habitat:Specialized 0.00018901053
Optimal_temp.:65 0.002923622
Pathogenic_in:No 0.001040721226
Temp._range:Mesophilic 0.005963720473



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GALACTITOLCAT-PWY (galactitol degradation)73660.5302
GALACTCAT-PWY (D-galactonate degradation)104780.4948
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)149970.4937
PWY-6196 (serine racemization)102750.4743
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951100.4611
GLUCARDEG-PWY (D-glucarate degradation I)152920.4412
GLUTDEG-PWY (glutamate degradation II)1941070.4402
XYLCAT-PWY (xylose degradation I)2171140.4351
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)156920.4285
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491230.4275
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491230.4275
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)176990.4264
PWY0-823 (arginine degradation III (arginine decarboxylase/agmatinase pathway))2451210.4216
GLYCOCAT-PWY (glycogen degradation I)2461200.4119
AST-PWY (arginine degradation II (AST pathway))120760.4105
GALACTARDEG-PWY (D-galactarate degradation I)151880.4104
PWY-6374 (vibriobactin biosynthesis)77570.4068
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112720.4036
PWY-561 (superpathway of glyoxylate cycle)162910.4018
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96650.4011



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G2002   G2001   G2000   EG12628   EG12627   EG12626   EG12625   EG12305   EG12304   EG10248   
G67800.999610.9997320.9995940.9993210.9993790.9997090.9998240.99890.9989330.999723
G20020.9998390.9997430.9991040.9990060.9995260.999690.9996340.99960.999829
G20010.9998230.999180.9990750.9996970.9997420.9996470.999680.999732
G20000.9992060.9992790.9997970.9996710.9996850.9997320.999635
EG126280.9998440.9996010.9995750.9994950.999670.999366
EG126270.9996420.999590.999320.9997170.999384
EG126260.9998390.9993670.9994440.999671
EG126250.9991760.9992550.999795
EG123050.9997650.9994
EG123040.999332
EG10248



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PAIRWISE BLAST SCORES:

  G6780   G2002   G2001   G2000   EG12628   EG12627   EG12626   EG12625   EG12305   EG12304   EG10248   
G67800.0f0------3.8e-51---
G2002-0.0f0--------1.9e-88
G20013.6e-37-0.0f0----1.7e-48---
G2000---0.0f0--4.0e-47----
EG12628----0.0f0------
EG12627-----0.0f0-----
EG12626------0.0f0----
EG126251.5e-70------0.0f0---
EG12305----8.7e-52---0.0f0--
EG12304-----2.1e-64---0.0f0-
EG10248-2.2e-94--------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- ABC-8-CPLX (dipeptide ABC transporter) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.455, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9993 EG10248 (dppA) DPPA-MONOMER (DppA)
   *in cand* 0.9997 0.9994 EG12626 (dppC) DPPC-MONOMER (DppC)
   *in cand* 0.9997 0.9992 EG12625 (dppB) DPPB-MONOMER (DppB)
   *in cand* 0.9995 0.9991 EG12628 (dppF) DPPF-MONOMER (DppF)
   *in cand* 0.9995 0.9990 EG12627 (dppD) DPPD-MONOMER (DppD)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9989 EG12304 (sapD) SAPD-MONOMER (SapD)
   *in cand* 0.9995 0.9989 EG12305 (sapF) SAPF-MONOMER (SapF)
   *in cand* 0.9997 0.9992 G2000 (sapC) SAPC-MONOMER (SapC)
   *in cand* 0.9996 0.9991 G2001 (sapB) SAPB-MONOMER (SapB)
   *in cand* 0.9996 0.9990 G2002 (sapA) SAPA-MONOMER (SapA)
   *in cand* 0.9995 0.9989 G6780 (ddpB) YDDR-MONOMER (YddR)

- ABC-29-CPLX (peptide uptake ABC transporter) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.455, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9990 G2002 (sapA) SAPA-MONOMER (SapA)
   *in cand* 0.9997 0.9992 G2000 (sapC) SAPC-MONOMER (SapC)
   *in cand* 0.9996 0.9991 G2001 (sapB) SAPB-MONOMER (SapB)
   *in cand* 0.9996 0.9989 EG12304 (sapD) SAPD-MONOMER (SapD)
   *in cand* 0.9995 0.9989 EG12305 (sapF) SAPF-MONOMER (SapF)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9993 EG10248 (dppA) DPPA-MONOMER (DppA)
   *in cand* 0.9997 0.9992 EG12625 (dppB) DPPB-MONOMER (DppB)
   *in cand* 0.9997 0.9994 EG12626 (dppC) DPPC-MONOMER (DppC)
   *in cand* 0.9995 0.9990 EG12627 (dppD) DPPD-MONOMER (DppD)
   *in cand* 0.9995 0.9991 EG12628 (dppF) DPPF-MONOMER (DppF)
   *in cand* 0.9995 0.9989 G6780 (ddpB) YDDR-MONOMER (YddR)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10248 EG12625 EG12626 EG12627 EG12628 (centered at EG12626)
G6780 (centered at G6780)
EG12304 EG12305 G2000 G2001 G2002 (centered at G2000)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6780   G2002   G2001   G2000   EG12628   EG12627   EG12626   EG12625   EG12305   EG12304   EG10248   
219/623200/623221/623214/623244/623236/623221/623206/623221/623243/623204/623
AAVE397945:0:Tyes711710711-210711--710
ABAC204669:0:Tyes3468-3468----3468-0-
ABAU360910:0:Tyes16116016164718060647646-0160
ACAU438753:0:Tyes746-101254125522462247352160-
AFER243159:0:Tyes-----0---0-
AFUL224325:0:Tyes0----2-0---
AHYD196024:0:Tyes-43271615162-014
AMAR329726:9:Tyes0----------
AMET293826:0:Tyes101810191018126101518201018-1821019
AORE350688:0:Tyes43-51054--3
APER272557:0:Tyes020550-11631346-2056-13462055
APLE416269:0:Tyes10731730432111847291987
APLE434271:0:Tno1070470343211167702769
ASAL382245:5:Tyes-1486148714887820102-149014891486
ASP232721:2:Tyes----210----
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YPSE349747:2:Tno22664322263226422652266012267



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