CANDIDATE ID: 100

CANDIDATE ID: 100

NUMBER OF GENES: 11
AVERAGE SCORE:    9.9932967e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    7.2727273e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G6350 (nadD) (b0639)
   Products of gene:
     - NICONUCADENYLYLTRAN-MONOMER (nicotinate-mononucleotide adenylyltransferase)
       Reactions:
        ATP + nicotinate mononucleotide  ->  diphosphate + nicotinate adenine dinucleotide
         In pathways
         PWY-3502 (PWY-3502)
         PWY0-781 (aspartate superpathway)
         NADSYN-PWY (NADSYN-PWY)
         PYRIDNUCSAL-PWY (NAD salvage pathway I)
         PYRIDNUCSYN-PWY (NAD biosynthesis I (from aspartate))
         PWY-5381 (PWY-5381)
         PWY-5653 (PWY-5653)

- EG11893 (dacD) (b2010)
   Products of gene:
     - RPOA-MONOMER (DD-carboxypeptidase, penicillin-binding protein 6b)
       Reactions:
        a lipid II + H2O  =  a N-acetylglucosamine--N-acetylmuramyl-(tetrapeptide) pyrophosphoryl-undecaprenol + D-alanine

- EG11592 (ybeD) (b0631)
   Products of gene:
     - EG11592-MONOMER (conserved protein)

- EG11591 (lipB) (b0630)
   Products of gene:
     - EG11591-MONOMER (lipoyl-protein ligase)
       Reactions:
        an apo-GcvH protein + a lipoyl-[acp]  =  H-Gcv-protein-(lipoyl)lysine + a holo-[acp]
        SucB + lipoyl-ACP  =  SucB-lipoate + a holo-[acp]
        lipoate acetyltransferase / dihydrolipoamide acetyltransferase + lipoyl-ACP  =  AceF-lipoate + a holo-[acp]
        an octanoyl-[acp] + a non-lipoylated protein-lipoyl domain  ->  an octanoylated protein lipoyl-domain + a holo-[acp]
         In pathways
         PWY0-501 (lipoate biosynthesis and incorporation I)

- EG11412 (holA) (b0640)
   Products of gene:
     - EG11412-MONOMER (DNA polymerase III, δ subunit)
     - CPLX0-3801 (DNA polymerase III, preinitiation complex)
     - CPLX0-3803 (DNA polymerase III, holoenzyme)

- EG11255 (ybeB) (b0637)
   Products of gene:
     - EG11255-MONOMER (predicted protein)

- EG10854 (rlpA) (b0633)
   Products of gene:
     - EG10854-MONOMER (rare lipoprotein RlpA)

- EG10607 (mrdB) (b0634)
   Products of gene:
     - EG10607-MONOMER (rod shape-determining membrane protein; sensitivity to radiation and drugs)

- EG10606 (mrdA) (b0635)
   Products of gene:
     - EG10606-MONOMER (cell shape; peptidoglycan synthetase; penicillin-binding protein 2)
       Reactions:
        peptidoglycan D-alanyl-DAP crosslink + H2O  =  peptidoglycan tetrapeptide, glycan chain 2 + peptidoglycan tetrapeptide, glycan chain 1

- EG10203 (dacC) (b0839)
   Products of gene:
     - EG10203-MONOMER (penicillin-binding protein 6)
       Reactions:
        a lipid II + H2O  =  a N-acetylglucosamine--N-acetylmuramyl-(tetrapeptide) pyrophosphoryl-undecaprenol + D-alanine

- EG10201 (dacA) (b0632)
   Products of gene:
     - EG10201-MONOMER (D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5)
       Reactions:
        a beta-lactam + H2O  ->  a substituted beta-amino acid
        a lipid II + H2O  =  a N-acetylglucosamine--N-acetylmuramyl-(tetrapeptide) pyrophosphoryl-undecaprenol + D-alanine



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ORGANISMS CONTAINING AT LEAST 9 GENES FROM THE GROUP:

Total number of orgs: 175
Effective number of orgs (counting one per cluster within 468 clusters): 111

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175811
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295311
YPES386656 ncbi Yersinia pestis Pestoides F11
YPES377628 ncbi Yersinia pestis Nepal51611
YPES360102 ncbi Yersinia pestis Antiqua11
YPES349746 ncbi Yersinia pestis Angola11
YPES214092 ncbi Yersinia pestis CO9211
YPES187410 ncbi Yersinia pestis KIM 1011
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808111
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A10
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 31101810
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC1033110
XFAS405440 ncbi Xylella fastidiosa M1210
XFAS183190 ncbi Xylella fastidiosa Temecula110
XFAS160492 ncbi Xylella fastidiosa 9a5c10
XCAM487884 Xanthomonas campestris pv. paulliniae10
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-1010
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 800410
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 3391310
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 30610
VVUL216895 ncbi Vibrio vulnificus CMCP610
VVUL196600 ncbi Vibrio vulnificus YJ01610
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 221063310
VFIS312309 ncbi Vibrio fischeri ES11410
VEIS391735 ncbi Verminephrobacter eiseniae EF01-29
VCHO345073 ncbi Vibrio cholerae O39510
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N1696110
TTUR377629 ncbi Teredinibacter turnerae T790110
TDEN292415 ncbi Thiobacillus denitrificans ATCC 2525911
TCRU317025 ncbi Thiomicrospira crunogena XCL-210
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT211
SSP94122 ncbi Shewanella sp. ANA-311
SSON300269 ncbi Shigella sonnei Ss04611
SSED425104 ncbi Shewanella sediminis HAW-EB311
SPRO399741 ncbi Serratia proteamaculans 56811
SPEA398579 ncbi Shewanella pealeana ATCC 70034511
SONE211586 ncbi Shewanella oneidensis MR-111
SLOI323850 ncbi Shewanella loihica PV-411
SHIGELLA ncbi Shigella flexneri 2a str. 2457T11
SHAL458817 ncbi Shewanella halifaxensis HAW-EB411
SGLO343509 ncbi Sodalis glossinidius morsitans10
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB9
SFLE373384 ncbi Shigella flexneri 5 str. 840111
SFLE198214 ncbi Shigella flexneri 2a str. 30111
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47611
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6711
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 915011
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1811
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty211
SDYS300267 ncbi Shigella dysenteriae Sd19711
SDEN318161 ncbi Shewanella denitrificans OS21711
SDEG203122 ncbi Saccharophagus degradans 2-4011
SBOY300268 ncbi Shigella boydii Sb22711
SBAL402882 ncbi Shewanella baltica OS18511
SBAL399599 ncbi Shewanella baltica OS19511
RSOL267608 ncbi Ralstonia solanacearum GMI100011
RMET266264 ncbi Ralstonia metallidurans CH3411
RFER338969 ncbi Rhodoferax ferrireducens T11810
REUT381666 ncbi Ralstonia eutropha H1611
REUT264198 ncbi Ralstonia eutropha JMP13411
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC300010
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a10
PSTU379731 ncbi Pseudomonas stutzeri A150111
PSP56811 Psychrobacter sp.9
PSP296591 ncbi Polaromonas sp. JS66611
PPUT76869 ncbi Pseudomonas putida GB-110
PPUT351746 ncbi Pseudomonas putida F110
PPUT160488 ncbi Pseudomonas putida KT244010
PPRO298386 ncbi Photobacterium profundum SS910
PNAP365044 ncbi Polaromonas naphthalenivorans CJ210
PMUL272843 ncbi Pasteurella multocida multocida Pm7010
PMEN399739 ncbi Pseudomonas mendocina ymp11
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO111
PING357804 ncbi Psychromonas ingrahamii 3711
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC12511
PFLU220664 ncbi Pseudomonas fluorescens Pf-510
PFLU216595 ncbi Pseudomonas fluorescens SBW2510
PFLU205922 ncbi Pseudomonas fluorescens Pf0-110
PENT384676 ncbi Pseudomonas entomophila L4810
PATL342610 ncbi Pseudoalteromonas atlantica T6c11
PARC259536 ncbi Psychrobacter arcticus 273-410
PAER208964 ncbi Pseudomonas aeruginosa PAO111
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA1411
NMUL323848 ncbi Nitrosospira multiformis ATCC 2519611
NMEN374833 ncbi Neisseria meningitidis 0534429
NMEN272831 ncbi Neisseria meningitidis FAM189
NMEN122587 ncbi Neisseria meningitidis Z24919
NMEN122586 ncbi Neisseria meningitidis MC589
NGON242231 ncbi Neisseria gonorrhoeae FA 10909
NEUT335283 ncbi Nitrosomonas eutropha C9111
NEUR228410 ncbi Nitrosomonas europaea ATCC 1971811
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E10
MSP400668 ncbi Marinomonas sp. MWYL110
MPET420662 ncbi Methylibium petroleiphilum PM110
MFLA265072 ncbi Methylobacillus flagellatus KT11
MCAP243233 ncbi Methylococcus capsulatus Bath11
MAQU351348 ncbi Marinobacter aquaeolei VT811
LPNE400673 ncbi Legionella pneumophila Corby9
LPNE297246 ncbi Legionella pneumophila Paris9
LPNE297245 ncbi Legionella pneumophila Lens10
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 110
LCHO395495 ncbi Leptothrix cholodnii SP-611
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857811
JSP375286 ncbi Janthinobacterium sp. Marseille11
ILOI283942 ncbi Idiomarina loihiensis L2TR11
HSOM205914 ncbi Haemophilus somnus 129PT10
HINF71421 ncbi Haemophilus influenzae Rd KW2010
HINF374930 ncbi Haemophilus influenzae PittEE10
HINF281310 ncbi Haemophilus influenzae 86-028NP10
HHAL349124 ncbi Halorhodospira halophila SL111
HDUC233412 ncbi Haemophilus ducreyi 35000HP10
HCHE349521 ncbi Hahella chejuensis KCTC 239610
HARS204773 ncbi Herminiimonas arsenicoxydans11
ESP42895 Enterobacter sp.11
EFER585054 ncbi Escherichia fergusonii ATCC 3546911
ECOO157 ncbi Escherichia coli O157:H7 EDL93311
ECOL83334 Escherichia coli O157:H711
ECOL585397 ncbi Escherichia coli ED1a11
ECOL585057 ncbi Escherichia coli IAI3911
ECOL585056 ncbi Escherichia coli UMN02611
ECOL585055 ncbi Escherichia coli 5598911
ECOL585035 ncbi Escherichia coli S8811
ECOL585034 ncbi Escherichia coli IAI111
ECOL481805 ncbi Escherichia coli ATCC 873911
ECOL469008 ncbi Escherichia coli BL21(DE3)11
ECOL439855 ncbi Escherichia coli SMS-3-511
ECOL413997 ncbi Escherichia coli B str. REL60611
ECOL409438 ncbi Escherichia coli SE1111
ECOL405955 ncbi Escherichia coli APEC O110
ECOL364106 ncbi Escherichia coli UTI8911
ECOL362663 ncbi Escherichia coli 53611
ECOL331111 ncbi Escherichia coli E24377A11
ECOL316407 ncbi Escherichia coli K-12 substr. W311011
ECOL199310 ncbi Escherichia coli CFT07311
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104311
DNOD246195 ncbi Dichelobacter nodosus VCS1703A9
DARO159087 ncbi Dechloromonas aromatica RCB11
CVIO243365 ncbi Chromobacterium violaceum ATCC 1247211
CSAL290398 ncbi Chromohalobacter salexigens DSM 304311
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)9
CPSY167879 ncbi Colwellia psychrerythraea 34H11
CJAP155077 Cellvibrio japonicus11
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-11111
CBUR360115 ncbi Coxiella burnetii RSA 33111
CBUR227377 ncbi Coxiella burnetii RSA 49311
BVIE269482 ncbi Burkholderia vietnamiensis G411
BTHA271848 ncbi Burkholderia thailandensis E26411
BSP36773 Burkholderia sp.11
BPSE320373 ncbi Burkholderia pseudomallei 66810
BPSE320372 ncbi Burkholderia pseudomallei 1710b11
BPSE272560 ncbi Burkholderia pseudomallei K9624311
BPET94624 Bordetella petrii11
BPER257313 ncbi Bordetella pertussis Tohama I11
BPAR257311 ncbi Bordetella parapertussis 1282211
BMAL320389 ncbi Burkholderia mallei NCTC 1024711
BMAL320388 ncbi Burkholderia mallei SAVP111
BMAL243160 ncbi Burkholderia mallei ATCC 2334411
BCEN331272 ncbi Burkholderia cenocepacia HI242411
BCEN331271 ncbi Burkholderia cenocepacia AU 105411
BBRO257310 ncbi Bordetella bronchiseptica RB5011
BAMB398577 ncbi Burkholderia ambifaria MC40-611
BAMB339670 ncbi Burkholderia ambifaria AMMD11
ASP76114 ncbi Aromatoleum aromaticum EbN111
ASP62977 ncbi Acinetobacter sp. ADP110
ASP62928 ncbi Azoarcus sp. BH7211
ASP232721 ncbi Acidovorax sp. JS4210
ASAL382245 ncbi Aeromonas salmonicida salmonicida A44911
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL0310
APLE416269 ncbi Actinobacillus pleuropneumoniae L2010
AHYD196024 Aeromonas hydrophila dhakensis11
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 2327010
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-110
ABOR393595 ncbi Alcanivorax borkumensis SK210
ABAU360910 ncbi Bordetella avium 197N11
AAVE397945 ncbi Acidovorax citrulli AAC00-110


Names of the homologs of the genes in the group in each of these orgs
  G6350   EG11893   EG11592   EG11591   EG11412   EG11255   EG10854   EG10607   EG10606   EG10203   EG10201   
YPSE349747 YPSIP31758_2929YPSIP31758_2952YPSIP31758_2953YPSIP31758_2954YPSIP31758_2928YPSIP31758_2947YPSIP31758_2951YPSIP31758_2950YPSIP31758_2949YPSIP31758_2659YPSIP31758_2952
YPSE273123 YPTB1100YPTB1094YPTB1093YPTB1092YPTB1101YPTB1099YPTB1095YPTB1096YPTB1097YPTB1351YPTB1351
YPES386656 YPDSF_2646YPDSF_2652YPDSF_2653YPDSF_2654YPDSF_2645YPDSF_2647YPDSF_2651YPDSF_2650YPDSF_2649YPDSF_2376YPDSF_2652
YPES377628 YPN_1092YPN_1086YPN_1085YPN_1084YPN_1093YPN_1091YPN_1087YPN_1088YPN_1089YPN_2659YPN_2659
YPES360102 YPA_2490YPA_2498YPA_2499YPA_2500YPA_2489YPA_2491YPA_2495YPA_2494YPA_2493YPA_2498YPA_2498
YPES349746 YPANGOLA_A1845YPANGOLA_A1852YPANGOLA_A1853YPANGOLA_A1854YPANGOLA_A1844YPANGOLA_A1846YPANGOLA_A1851YPANGOLA_A1850YPANGOLA_A1849YPANGOLA_A1549YPANGOLA_A1852
YPES214092 YPO2607YPO2601YPO2600YPO2599YPO2608YPO2606YPO2602YPO2603YPO2604YPO1320YPO2601
YPES187410 Y1181Y1175Y1174Y1173Y1182Y1180Y1176Y1177Y1178Y2864Y1175
YENT393305 YE2999YE3005YE3006YE3007YE2998YE3000YE3004YE3003YE3002YE1471YE3005
XORY360094 XOOORF_3683XOOORF_0937XOOORF_0940XOOORF_3684XOOORF_3682XOOORF_0935XOOORF_0925XOOORF_0924XOOORF_0937XOOORF_0937
XORY342109 XOO3139XOO3734XOO3731XOO3140XOO3138XOO3735XOO3744XOO3745XOO3734XOO3734
XORY291331 XOO3326XOO3956XOO3953XOO3327XOO3325XOO3957XOO3967XOO3968XOO3956XOO3956
XFAS405440 XFASM12_1379XFASM12_1430XFASM12_0600XFASM12_1378XFASM12_1380XFASM12_1386XFASM12_0672XFASM12_0671XFASM12_1430XFASM12_1430
XFAS183190 PD_1233PD_1277PD_0531PD_1232PD_1234PD_1236PD_0561PD_0560PD_1277PD_1277
XFAS160492 XF2179XF2230XF1270XF2178XF2180XF2185XF1313XF1312XF2230XF2230
XCAM487884 XCC-B100_1544XCC-B100_0741XCC-B100_0744XCC-B100_1543XCC-B100_1545XCC-B100_0740XCC-B100_0728XCC-B100_0727XCC-B100_0741XCC-B100_0741
XCAM316273 XCAORF_2962XCAORF_3796XCAORF_3792XCAORF_2963XCAORF_2961XCAORF_3797XCAORF_3802XCAORF_3803XCAORF_3796XCAORF_3796
XCAM314565 XC_1500XC_0708XC_0712XC_1499XC_1501XC_0707XC_0695XC_0694XC_0708XC_0708
XCAM190485 XCC2616XCC3456XCC3452XCC2617XCC2615XCC3457XCC3466XCC3467XCC3456XCC3456
XAXO190486 XAC2778XAC0664XAC0667XAC2779XAC2777XAC0663XAC0660XAC0659XAC0664XAC0664
VVUL216895 VV1_0281VV1_0282VV1_0283VV1_0275VV1_0276VV1_0280VV1_0279VV2_1370VV1_0281VV1_0281
VVUL196600 VV0903VV0902VV0901VV0909VV0908VV0904VV0905VV0906VV0903VV0903
VPAR223926 VP0719VP0718VP0717VP0725VP0724VP0720VP0721VP0722VP0719VP0719
VFIS312309 VF0745VF0744VF0743VF0751VF0750VF0746VF0747VF1481VF0745VF0745
VEIS391735 VEIS_1254VEIS_0472VEIS_0471VEIS_0964VEIS_2625VEIS_2191VEIS_1607VEIS_1254VEIS_1254
VCHO345073 VC0395_A0470VC0395_A0469VC0395_A0468VC0395_A0476VC0395_A0475VC0395_A0471VC0395_A0472VC0395_A0473VC0395_A0470VC0395_A0470
VCHO VC0947VC0945VC0944VC0953VC0952VC0948VC0949VC0950VC0947VC0947
TTUR377629 TERTU_0608TERTU_0609TERTU_0610TERTU_3887TERTU_0601TERTU_0606TERTU_0604TERTU_0603TERTU_0608TERTU_0608
TDEN292415 TBD_2441TBD_0647TBD_0268TBD_0269TBD_2443TBD_2440TBD_0265TBD_0264TBD_0263TBD_0647TBD_0647
TCRU317025 TCR_0484TCR_1635TCR_1637TCR_1638TCR_0481TCR_0485TCR_1634TCR_1633TCR_1635TCR_1635
STYP99287 STM0645STM2062STM0636STM0635STM0646STM0642STM0638STM0639STM1910STM0863STM0637
SSP94122 SHEWANA3_0998SHEWANA3_0991SHEWANA3_0990SHEWANA3_0989SHEWANA3_0999SHEWANA3_0997SHEWANA3_0992SHEWANA3_0994SHEWANA3_0995SHEWANA3_0991SHEWANA3_0991
SSON300269 SSO_0593SSO_2080SSO_0585SSO_0584SSO_0594SSO_0591SSO_0587SSO_0588SSO_0589SSO_0586SSO_0586
SSED425104 SSED_3482SSED_3489SSED_3490SSED_3491SSED_3481SSED_3483SSED_3488SSED_3486SSED_3485SSED_3489SSED_3489
SPRO399741 SPRO_1204SPRO_2636SPRO_1197SPRO_1196SPRO_1205SPRO_1203SPRO_1199SPRO_1200SPRO_2356SPRO_1628SPRO_1628
SPEA398579 SPEA_3146SPEA_3153SPEA_3154SPEA_3155SPEA_3145SPEA_3147SPEA_3152SPEA_3150SPEA_3149SPEA_3153SPEA_3153
SONE211586 SO_1171SO_1164SO_1163SO_1162SO_1172SO_1170SO_1165SO_1167SO_1168SO_1164SO_1164
SLOI323850 SHEW_2932SHEW_2939SHEW_2940SHEW_2941SHEW_2931SHEW_2933SHEW_2938SHEW_2936SHEW_2935SHEW_2939SHEW_2939
SHIGELLA YBENDACAYBEDLIPBHOLAYBEBRLPAMRDBMRDADACADACA
SHAL458817 SHAL_3231SHAL_3238SHAL_3239SHAL_3240SHAL_3230SHAL_3232SHAL_3237SHAL_3235SHAL_3234SHAL_3238SHAL_3238
SGLO343509 SG0800SG0795SG0794SG0793SG0801SG0799SG0796SG0797SG0921SG0795
SFUM335543 SFUM_3645SFUM_1305SFUM_1675SFUM_3646SFUM_3300SFUM_2588SFUM_2589SFUM_1305SFUM_1305
SFLE373384 SFV_0687SFV_0694SFV_0695SFV_0696SFV_0686SFV_0689SFV_0693SFV_0692SFV_0691SFV_0694SFV_0694
SFLE198214 AAN42278.1AAN42285.1AAN42286.1AAN42287.1AAN42277.1AAN42280.1AAN42284.1AAN42283.1AAN42282.1AAN42422.1AAN42285.1
SENT454169 SEHA_C0761SEHA_C2285SEHA_C0752SEHA_C0751SEHA_C0762SEHA_C0758SEHA_C0754SEHA_C0755SEHA_C2125SEHA_C0996SEHA_C0753
SENT321314 SCH_0675SCH_2071SCH_0665SCH_0664SCH_0676SCH_0672SCH_0668SCH_0669SCH_1917SCH_0857SCH_0666
SENT295319 SPA2089SPA2097SPA2098SPA2099SPA2088SPA2092SPA2096SPA2095SPA2094SPA1899SPA2097
SENT220341 STY0696STY0688STY0687STY0686STY0697STY0693STY0689STY0690STY0691STY0896STY0688
SENT209261 T2222T2230T2231T2232T2221T2225T2229T2228T2227T2033T2230
SDYS300267 SDY_0561SDY_2233SDY_0553SDY_0552SDY_0562SDY_0559SDY_0555SDY_0556SDY_0557SDY_0841SDY_0554
SDEN318161 SDEN_0794SDEN_0851SDEN_0869SDEN_0868SDEN_0795SDEN_0857SDEN_0852SDEN_0854SDEN_0855SDEN_0851SDEN_0851
SDEG203122 SDE_3344SDE_3337SDE_3336SDE_3335SDE_3310SDE_3343SDE_3338SDE_3340SDE_3341SDE_3337SDE_3337
SBOY300268 SBO_0503SBO_0496SBO_0495SBO_0494SBO_0504SBO_0501SBO_0497SBO_0498SBO_0499SBO_0496SBO_0496
SBAL402882 SHEW185_3314SHEW185_3321SHEW185_3322SHEW185_3323SHEW185_3313SHEW185_3315SHEW185_3320SHEW185_3318SHEW185_3317SHEW185_3321SHEW185_3321
SBAL399599 SBAL195_3450SBAL195_3457SBAL195_3458SBAL195_3459SBAL195_3449SBAL195_3451SBAL195_3456SBAL195_3454SBAL195_3453SBAL195_3457SBAL195_3457
RSOL267608 RSC2193RSC0327RSC0326RSC0323RSC2742RSC2194RSC3267RSC0063RSC0062RSC0327RSC0327
RMET266264 RMET_0782RMET_0225RMET_0224RMET_0060RMET_2971RMET_0781RMET_3432RMET_0055RMET_0054RMET_0225RMET_0225
RFER338969 RFER_2078RFER_0920RFER_3936RFER_3935RFER_0760RFER_2079RFER_3371RFER_3920RFER_0920RFER_0920
REUT381666 H16_A0913H16_A0302H16_A0303H16_A0122H16_A3137H16_A0912H16_A3581H16_A0117H16_A0116H16_A0302H16_A0302
REUT264198 REUT_A2525REUT_A0280REUT_A0281REUT_A0085REUT_A2832REUT_A2526REUT_A3267REUT_A0080REUT_A0079REUT_A0280REUT_A0280
PSYR223283 PSPTO_4828PSPTO_4821PSPTO_4819PSPTO_4814PSPTO_4827PSPTO_4822PSPTO_4824PSPTO_4825PSPTO_4821PSPTO_4821
PSYR205918 PSYR_4368PSYR_4361PSYR_4359PSYR_4354PSYR_4367PSYR_4362PSYR_4364PSYR_4365PSYR_4361PSYR_4361
PSTU379731 PST_3784PST_3777PST_3776PST_3775PST_3770PST_3783PST_3778PST_3780PST_3781PST_3777PST_3777
PSP56811 PSYCPRWF_0344PSYCPRWF_1758PSYCPRWF_1380PSYCPRWF_0343PSYCPRWF_0831PSYCPRWF_1786PSYCPRWF_0800PSYCPRWF_1758PSYCPRWF_1758
PSP296591 BPRO_1971BPRO_0250BPRO_0316BPRO_0314BPRO_4600BPRO_1972BPRO_4129BPRO_1091BPRO_0225BPRO_0250BPRO_0250
PPUT76869 PPUTGB1_4863PPUTGB1_4856PPUTGB1_4854PPUTGB1_4849PPUTGB1_4862PPUTGB1_4857PPUTGB1_4859PPUTGB1_4860PPUTGB1_4856PPUTGB1_4856
PPUT351746 PPUT_4685PPUT_4678PPUT_4676PPUT_4671PPUT_4684PPUT_4679PPUT_4681PPUT_4682PPUT_4678PPUT_4678
PPUT160488 PP_4810PP_4803PP_4801PP_4796PP_4809PP_4804PP_4806PP_4807PP_4803PP_4803
PPRO298386 PBPRA2893PBPRA2894PBPRA2895PBPRA2887PBPRA2888PBPRA2892PBPRA2891PBPRB0070PBPRA2893PBPRA2893
PNAP365044 PNAP_0197PNAP_0245PNAP_0243PNAP_3769PNAP_1732PNAP_0492PNAP_3400PNAP_0176PNAP_0197PNAP_0197
PMUL272843 PM1927PM1928PM1929PM1216PM1922PM1926PM1925PM1924PM1927PM1927
PMEN399739 PMEN_3801PMEN_3794PMEN_3793PMEN_3792PMEN_3788PMEN_3800PMEN_3795PMEN_3797PMEN_3798PMEN_3794PMEN_3794
PLUM243265 PLU1300PLU1294PLU1293PLU1292PLU1301PLU1299PLU1295PLU1296PLU1297PLU1573PLU1294
PING357804 PING_1188PING_3027PING_3028PING_3029PING_1189PING_1137PING_1133PING_1134PING_1135PING_3027PING_3027
PHAL326442 PSHAA1028PSHAA1022PSHAA1021PSHAA1020PSHAA1029PSHAA1027PSHAA1023PSHAA1024PSHAA1025PSHAA1022PSHAA1022
PFLU220664 PFL_5455PFL_5448PFL_5446PFL_5441PFL_5454PFL_5449PFL_5451PFL_5452PFL_5448PFL_5448
PFLU216595 PFLU5426PFLU5419PFLU5417PFLU5412PFLU5425PFLU5420PFLU5422PFLU5423PFLU5419PFLU5419
PFLU205922 PFL_4973PFL_4966PFL_4964PFL_4959PFL_4972PFL_0834PFL_4969PFL_4970PFL_4966PFL_4966
PENT384676 PSEEN4829PSEEN4822PSEEN4820PSEEN4815PSEEN4828PSEEN4823PSEEN4825PSEEN4826PSEEN4822PSEEN4822
PATL342610 PATL_1563PATL_1556PATL_1555PATL_1554PATL_1564PATL_1562PATL_1557PATL_1559PATL_1560PATL_1556PATL_1556
PARC259536 PSYC_0195PSYC_0687PSYC_1262PSYC_1295PSYC_0194PSYC_0928PSYC_0929PSYC_1563PSYC_0687PSYC_0687
PAER208964 PA4006PA3999PA3998PA3997PA3989PA4005PA4000PA4002PA4003PA3999PA3999
PAER208963 PA14_12020PA14_12100PA14_12110PA14_12120PA14_12200PA14_12030PA14_12090PA14_12070PA14_12060PA14_12100PA14_12100
NMUL323848 NMUL_A0360NMUL_A1991NMUL_A1989NMUL_A1988NMUL_A0513NMUL_A0361NMUL_A0315NMUL_A0316NMUL_A0317NMUL_A1991NMUL_A1991
NMEN374833 NMCC_0175NMCC_0839NMCC_1098NMCC_1096NMCC_0667NMCC_0176NMCC_1878NMCC_0839NMCC_0839
NMEN272831 NMC2003NMC0818NMC1112NMC1111NMC0658NMC2002NMC0261NMC0818NMC0818
NMEN122587 NMA0416NMA1095NMA1380NMA1379NMA0913NMA0417NMA2219NMA1095NMA1095
NMEN122586 NMB_2024NMB_0877NMB_1218NMB_1217NMB_0708NMB_2023NMB_0267NMB_0877NMB_0877
NGON242231 NGO2080NGO0443NGO0791NGO0792NGO0283NGO2081NGO1728NGO0443NGO0443
NEUT335283 NEUT_1610NEUT_0761NEUT_0759NEUT_0758NEUT_1427NEUT_1611NEUT_1587NEUT_1588NEUT_1589NEUT_0761NEUT_0761
NEUR228410 NE0359NE1485NE1487NE1488NE1137NE0358NE2065NE2066NE2067NE1485NE1485
MSUC221988 MS1829MS1828MS1827MS0332MS1834MS1830MS1831MS1832MS1829MS1829
MSP400668 MMWYL1_2851MMWYL1_2844MMWYL1_2842MMWYL1_2917MMWYL1_2850MMWYL1_2845MMWYL1_2847MMWYL1_2848MMWYL1_2844MMWYL1_2844
MPET420662 MPE_A1340MPE_A0311MPE_A0315MPE_A0216MPE_A1341MPE_A3528MPE_A0079MPE_A0080MPE_A0311MPE_A0311
MFLA265072 MFLA_2159MFLA_2497MFLA_2499MFLA_2500MFLA_2157MFLA_0593MFLA_2496MFLA_2495MFLA_2494MFLA_2497MFLA_2497
MCAP243233 MCA_1879MCA_0105MCA_0107MCA_0109MCA_1451MCA_2027MCA_2972MCA_0104MCA_0103MCA_0105MCA_0105
MAQU351348 MAQU_2416MAQU_2410MAQU_2409MAQU_2408MAQU_2746MAQU_2415MAQU_2411MAQU_2412MAQU_2413MAQU_2410MAQU_2410
LPNE400673 LPC_0761LPC_0928LPC_0931LPC_0793LPC_0927LPC_0790LPC_0791LPC_0928LPC_0928
LPNE297246 LPP1299LPP1466LPP1469LPP1332LPP1465LPP1328LPP1329LPP1466LPP1466
LPNE297245 LPL1298LPL1517LPL1514LPL1299LPL1328LPL1518LPL1325LPL1326LPL1517LPL1517
LPNE272624 LPG1345LPG1509LPG1511LPG1346LPG1377LPG1508LPG1374LPG1375LPG1509LPG1509
LCHO395495 LCHO_1950LCHO_4237LCHO_4239LCHO_0400LCHO_0481LCHO_1949LCHO_1244LCHO_0500LCHO_0501LCHO_4237LCHO_4237
KPNE272620 GKPORF_B5095GKPORF_B1730GKPORF_B5087GKPORF_B5086GKPORF_B5096GKPORF_B5093GKPORF_B5089GKPORF_B5090GKPORF_B0907GKPORF_B5308GKPORF_B5088
JSP375286 MMA_0541MMA_3248MMA_3250MMA_3251MMA_2898MMA_0540MMA_0201MMA_0200MMA_0199MMA_3248MMA_3248
ILOI283942 IL0950IL0957IL0958IL0959IL0949IL0951IL0956IL0954IL0953IL0957IL0957
HSOM205914 HS_0318HS_0317HS_0316HS_1555HS_0323HS_0319HS_0320HS_0321HS_0318HS_0318
HINF71421 HI_0029HI_0028HI_0027HI_0923HI_0034HI_0030HI_0031HI_0032HI_0029HI_0029
HINF374930 CGSHIEE_03165CGSHIEE_03170CGSHIEE_03175CGSHIEE_07400CGSHIEE_03140CGSHIEE_03160CGSHIEE_03155CGSHIEE_03150CGSHIEE_03165CGSHIEE_03165
HINF281310 NTHI0036NTHI0035NTHI0034NTHI1092NTHI0042NTHI0037NTHI0038NTHI0039NTHI0036NTHI0036
HHAL349124 HHAL_2141HHAL_1012HHAL_1014HHAL_1015HHAL_2143HHAL_2140HHAL_1011HHAL_1009HHAL_1008HHAL_1012HHAL_1012
HDUC233412 HD_2016HD_2015HD_2013HD_1130HD_2023HD_2017HD_2019HD_2020HD_2016HD_2016
HCHE349521 HCH_05846HCH_05839HCH_05837HCH_05357HCH_05845HCH_05840HCH_05842HCH_05843HCH_05839HCH_05839
HARS204773 HEAR0555HEAR2999HEAR3001HEAR3002HEAR2663HEAR0554HEAR0173HEAR0172HEAR0171HEAR2999HEAR2999
ESP42895 ENT638_1173ENT638_2578ENT638_1166ENT638_1165ENT638_1174ENT638_1172ENT638_1168ENT638_1169ENT638_1170ENT638_1330ENT638_1167
EFER585054 EFER_2467EFER_2473EFER_2474EFER_2475EFER_2466EFER_2468EFER_2472EFER_2471EFER_2470EFER_0980EFER_2473
ECOO157 YBENDACDYBEDLIPBHOLAYBEBRLPAMRDBMRDADACCDACA
ECOL83334 ECS0677ECS2812ECS0669ECS0668ECS0678ECS0675ECS0671ECS0672ECS0673ECS0919ECS0670
ECOL585397 ECED1_0636ECED1_2361ECED1_0627ECED1_0626ECED1_0637ECED1_0634ECED1_0630ECED1_0631ECED1_0632ECED1_0803ECED1_0628
ECOL585057 ECIAI39_0614ECIAI39_1006ECIAI39_0606ECIAI39_0605ECIAI39_0615ECIAI39_0612ECIAI39_0608ECIAI39_0609ECIAI39_0610ECIAI39_0818ECIAI39_0607
ECOL585056 ECUMN_0733ECUMN_2356ECUMN_0724ECUMN_0723ECUMN_0734ECUMN_0731ECUMN_0727ECUMN_0728ECUMN_0729ECUMN_1029ECUMN_0725
ECOL585055 EC55989_0631EC55989_2269EC55989_0623EC55989_0622EC55989_0632EC55989_0629EC55989_0625EC55989_0626EC55989_0627EC55989_0884EC55989_0624
ECOL585035 ECS88_0681ECS88_2109ECS88_0672ECS88_0671ECS88_0682ECS88_0679ECS88_0675ECS88_0676ECS88_0677ECS88_0856ECS88_0673
ECOL585034 ECIAI1_0623ECIAI1_2080ECIAI1_0614ECIAI1_0613ECIAI1_0624ECIAI1_0621ECIAI1_0617ECIAI1_0618ECIAI1_0619ECIAI1_0878ECIAI1_0615
ECOL481805 ECOLC_3006ECOLC_1630ECOLC_3014ECOLC_3015ECOLC_3005ECOLC_3008ECOLC_3012ECOLC_3011ECOLC_3010ECOLC_2803ECOLC_3013
ECOL469008 ECBD_3012ECBD_1647ECBD_3020ECBD_3021ECBD_3011ECBD_3014ECBD_3018ECBD_3017ECBD_3016ECBD_2784ECBD_3019
ECOL439855 ECSMS35_0659ECSMS35_1051ECSMS35_0651ECSMS35_0650ECSMS35_0660ECSMS35_0657ECSMS35_0653ECSMS35_0654ECSMS35_0655ECSMS35_0866ECSMS35_0652
ECOL413997 ECB_00608ECB_01913ECB_00600ECB_00599ECB_00609ECB_00606ECB_00602ECB_00603ECB_00604ECB_00806ECB_00601
ECOL409438 ECSE_0708ECSE_2283ECSE_0698ECSE_0697ECSE_0709ECSE_0705ECSE_0701ECSE_0702ECSE_0703ECSE_0897ECSE_0699
ECOL405955 APECO1_1416APECO1_1108APECO1_1424APECO1_1425APECO1_1415APECO1_1422APECO1_1421APECO1_1420APECO1_1254APECO1_1423
ECOL364106 UTI89_C0642UTI89_C0634UTI89_C0633UTI89_C0632UTI89_C0643UTI89_C0639UTI89_C0635UTI89_C0636UTI89_C0637UTI89_C0842UTI89_C0634
ECOL362663 ECP_0669ECP_2054ECP_0661ECP_0660ECP_0670ECP_0667ECP_0663ECP_0664ECP_0665ECP_0853ECP_0662
ECOL331111 ECE24377A_0665ECE24377A_2301ECE24377A_0656ECE24377A_0655ECE24377A_0666ECE24377A_0663ECE24377A_0658ECE24377A_0660ECE24377A_0661ECE24377A_0910ECE24377A_0657
ECOL316407 ECK0632:JW0634:B0639ECK2004:JW5329:B2010ECK0624:JW0626:B0631ECK0623:JW5089:B0630ECK0633:JW0635:B0640ECK0630:JW5090:B0637ECK0626:JW0628:B0633ECK0627:JW0629:B0634ECK0628:JW0630:B0635ECK0829:JW0823:B0839ECK0625:JW0627:B0632
ECOL199310 C0730C2538C0721C0720C0731C0728C0724C0725C0726C0924C0722
ECAR218491 ECA1306ECA1300ECA1299ECA1298ECA1307ECA1305ECA1301ECA1302ECA1303ECA2686ECA1300
DNOD246195 DNO_0899DNO_0897DNO_0244DNO_0467DNO_0961DNO_0963DNO_0964DNO_0899DNO_0899
DARO159087 DARO_0169DARO_0291DARO_0289DARO_0288DARO_0542DARO_0170DARO_0111DARO_0112DARO_0113DARO_0291DARO_0291
CVIO243365 CV_0519CV_3094CV_3095CV_3096CV_0507CV_0518CV_4384CV_4361CV_4360CV_3094CV_3094
CSAL290398 CSAL_1542CSAL_1549CSAL_1550CSAL_1551CSAL_2346CSAL_1543CSAL_1548CSAL_1546CSAL_1545CSAL_1549CSAL_1549
CRUT413404 RMAG_0327RMAG_0470RMAG_0542RMAG_0134RMAG_0326RMAG_0471RMAG_0797RMAG_0470RMAG_0470
CPSY167879 CPS_1718CPS_1712CPS_1711CPS_1710CPS_1720CPS_1717CPS_1713CPS_1714CPS_1715CPS_1712CPS_1712
CJAP155077 CJA_0786CJA_0793CJA_0795CJA_0796CJA_0452CJA_0787CJA_0792CJA_0790CJA_0789CJA_0793CJA_0793
CBUR434922 COXBU7E912_1509COXBU7E912_1345COXBU7E912_1346COXBU7E912_1350COXBU7E912_1508COXBU7E912_1511COXBU7E912_1060COXBU7E912_1514COXBU7E912_1513COXBU7E912_1345COXBU7E912_1345
CBUR360115 COXBURSA331_A0670COXBURSA331_A1408COXBURSA331_A1409COXBURSA331_A1413COXBURSA331_A0671COXBURSA331_A0666COXBURSA331_A0952COXBURSA331_A0663COXBURSA331_A0664COXBURSA331_A1408COXBURSA331_A1408
CBUR227377 CBU_0556CBU_1261CBU_1262CBU_1265CBU_0557CBU_0552CBU_0987CBU_0549CBU_0550CBU_1261CBU_1261
BVIE269482 BCEP1808_2382BCEP1808_2989BCEP1808_2987BCEP1808_2984BCEP1808_0624BCEP1808_2383BCEP1808_0246BCEP1808_3198BCEP1808_3197BCEP1808_2989BCEP1808_2989
BTHA271848 BTH_I1012BTH_I0380BTH_I0382BTH_I0385BTH_I1213BTH_I1011BTH_I3150BTH_I0142BTH_I0143BTH_I0380BTH_I0380
BSP36773 BCEP18194_A5624BCEP18194_A6236BCEP18194_A6234BCEP18194_A6231BCEP18194_A3742BCEP18194_A5625BCEP18194_A3389BCEP18194_A6465BCEP18194_A6464BCEP18194_A6236BCEP18194_A6236
BPSE320373 BURPS668_1228BURPS668_0438BURPS668_0443BURPS668_3413BURPS668_1227BURPS668_3821BURPS668_0166BURPS668_0167BURPS668_0438BURPS668_0438
BPSE320372 BURPS1710B_A1456BURPS1710B_A0662BURPS1710B_A0664BURPS1710B_A0667BURPS1710B_A3726BURPS1710B_A1455BURPS1710B_A0047BURPS1710B_A0384BURPS1710B_A0385BURPS1710B_A0662BURPS1710B_A0662
BPSE272560 BPSL1162BPSL0408BPSL0410BPSL0413BPSL2936BPSL1161BPSL3276BPSL0182BPSL0183BPSL0408BPSL0408
BPET94624 BPET3102BPET3320BPET4805BPET4804BPET3326BPET3103BPET0442BPET0431BPET0430BPET4807BPET3320
BPER257313 BP2311BP0102BP0104BP0105BP2042BP2312BP0689BP0378BP0377BP0102BP0102
BPAR257311 BPP2419BPP0166BPP0168BPP0169BPP1729BPP2418BPP4039BPP4052BPP4053BPP0166BPP0166
BMAL320389 BMA10247_0355BMA10247_3192BMA10247_3190BMA10247_3187BMA10247_2638BMA10247_0354BMA10247_2970BMA10247_2370BMA10247_2371BMA10247_3192BMA10247_3192
BMAL320388 BMASAVP1_A1072BMASAVP1_A0224BMASAVP1_A0222BMASAVP1_A0219BMASAVP1_A0368BMASAVP1_A1071BMASAVP1_A3399BMASAVP1_A2789BMASAVP1_A2788BMASAVP1_A0224BMASAVP1_A0224
BMAL243160 BMA_1887BMA_0058BMA_0056BMA_0053BMA_2451BMA_1888BMA_2911BMA_0158BMA_0159BMA_0058BMA_0058
BCEN331272 BCEN2424_2297BCEN2424_2893BCEN2424_2891BCEN2424_2888BCEN2424_0656BCEN2424_2298BCEN2424_0286BCEN2424_3114BCEN2424_3113BCEN2424_2893BCEN2424_2893
BCEN331271 BCEN_1685BCEN_2278BCEN_2276BCEN_2273BCEN_0173BCEN_1686BCEN_2820BCEN_2500BCEN_2499BCEN_2278BCEN_2278
BBRO257310 BB1868BB0168BB0170BB0171BB3379BB1867BB4512BB4525BB4526BB0168BB0168
BAMB398577 BAMMC406_2214BAMMC406_2805BAMMC406_2803BAMMC406_2800BAMMC406_0577BAMMC406_2215BAMMC406_0214BAMMC406_3052BAMMC406_3051BAMMC406_2805BAMMC406_2805
BAMB339670 BAMB_2335BAMB_2943BAMB_2941BAMB_2938BAMB_0551BAMB_2336BAMB_0200BAMB_3169BAMB_3168BAMB_2943BAMB_2943
ASP76114 EBA3972EBA3044EBD70EBA3048EBA4383EBA3971EBA3043EBA3041EBA3040EBA3044EBA3044
ASP62977 ACIAD1225ACIAD2926ACIAD2927ACIAD3108ACIAD3076ACIAD2265ACIAD2263ACIAD1101ACIAD1225ACIAD1225
ASP62928 AZO3607AZO0180AZO0182AZO0183AZO3217AZO3608AZO0179AZO0178AZO0177AZO0180AZO0180
ASP232721 AJS_0272AJS_0300AJS_0299AJS_3915AJS_1901AJS_0622AJS_3647AJS_0242AJS_0272AJS_0272
ASAL382245 ASA_1065ASA_1058ASA_1057ASA_1056ASA_1066ASA_1064ASA_1059ASA_1061ASA_1062ASA_1058ASA_1058
APLE434271 APJL_1629APJL_1628APJL_1627APJL_0886APJL_1634APJL_1630APJL_1631APJL_1632APJL_1629APJL_1629
APLE416269 APL_1596APL_1595APL_1594APL_0874APL_1601APL_1597APL_1598APL_1599APL_1596APL_1596
AHYD196024 AHA_3251AHA_3259AHA_3260AHA_3261AHA_3250AHA_3252AHA_3258AHA_3255AHA_3254AHA_3259AHA_3259
AFER243159 AFE_0161AFE_0535AFE_0533AFE_2580AFE_0160AFE_0189AFE_0536AFE_0537AFE_0535AFE_0535
AEHR187272 MLG_0404MLG_0176MLG_0179MLG_0402MLG_0405MLG_0175MLG_0173MLG_0172MLG_0176MLG_0176
ABOR393595 ABO_1952ABO_1959ABO_1963ABO_1949ABO_1953ABO_1958ABO_1956ABO_1955ABO_1959ABO_1959
ABAU360910 BAV2210BAV0135BAV0137BAV0138BAV2494BAV2211BAV3159BAV3172BAV3173BAV0135BAV0135
AAVE397945 AAVE_0332AAVE_0364AAVE_0363AAVE_4546AAVE_3200AAVE_4056AAVE_0846AAVE_0297AAVE_0332AAVE_0332


Organism features enriched in list (features available for 167 out of the 175 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00008061292
Arrangment:Pairs 0.004023243112
Arrangment:Singles 0.006351694286
Disease:Bubonic_plague 0.000517766
Disease:Dysentery 0.000517766
Disease:Gastroenteritis 0.00033361013
Disease:Legionnaire's_disease 0.006560844
Disease:Meningitis_and_septicemia 0.006560844
Endospores:No 1.365e-832211
GC_Content_Range4:0-40 6.231e-2412213
GC_Content_Range4:40-60 1.102e-12102224
GC_Content_Range4:60-100 0.004662453145
GC_Content_Range7:30-40 4.787e-1512166
GC_Content_Range7:40-50 0.009013143117
GC_Content_Range7:50-60 9.566e-1159107
GC_Content_Range7:60-70 0.000648153134
Genome_Size_Range5:0-2 5.145e-196155
Genome_Size_Range5:2-4 0.000109438197
Genome_Size_Range5:4-6 6.270e-20100184
Genome_Size_Range5:6-10 0.00111162347
Genome_Size_Range9:1-2 3.293e-146128
Genome_Size_Range9:2-3 0.009219625120
Genome_Size_Range9:3-4 0.00476401377
Genome_Size_Range9:4-5 2.115e-74996
Genome_Size_Range9:5-6 2.527e-105188
Genome_Size_Range9:6-8 0.00006872238
Gram_Stain:Gram_Neg 2.027e-32155333
Habitat:Specialized 0.0033577753
Motility:No 4.318e-1114151
Motility:Yes 3.894e-10110267
Optimal_temp.:35-37 2.161e-61213
Oxygen_Req:Anaerobic 4.665e-106102
Oxygen_Req:Facultative 1.255e-887201
Pathogenic_in:Animal 0.00813862766
Pathogenic_in:No 0.000014143226
Pathogenic_in:Plant 0.00031831115
Shape:Coccobacillus 0.0025020811
Shape:Coccus 7.648e-6882
Shape:Rod 2.855e-13137347
Shape:Spiral 0.0007325234
Temp._range:Mesophilic 0.0004711149473
Temp._range:Psychrophilic 0.002710579
Temp._range:Thermophilic 0.0000737135



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ORGANISMS CONTAINING AT MOST 2 GENES FROM THE GROUP:

Total number of orgs: 174
Effective number of orgs (counting one per cluster within 468 clusters): 131

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 131
UURE95664 Ureaplasma urealyticum serovar 101
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/272
TWHI203267 ncbi Tropheryma whipplei Twist2
TVOL273116 ncbi Thermoplasma volcanium GSS10
TSP28240 Thermotoga sp.2
TPET390874 ncbi Thermotoga petrophila RKU-12
TPEN368408 ncbi Thermofilum pendens Hrk 50
TMAR243274 ncbi Thermotoga maritima MSB82
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-92
STHE299768 ncbi Streptococcus thermophilus CNRZ10662
STHE264199 ncbi Streptococcus thermophilus LMG 183112
SSUI391296 ncbi Streptococcus suis 98HAH332
SSUI391295 ncbi Streptococcus suis 05ZYH332
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SPYO370554 ncbi Streptococcus pyogenes MGAS107502
SPYO370553 ncbi Streptococcus pyogenes MGAS20962
SPYO370552 ncbi Streptococcus pyogenes MGAS102702
SPYO370551 ncbi Streptococcus pyogenes MGAS94292
SPYO319701 ncbi Streptococcus pyogenes MGAS61802
SPYO293653 ncbi Streptococcus pyogenes MGAS50052
SPYO286636 ncbi Streptococcus pyogenes MGAS103942
SPYO198466 ncbi Streptococcus pyogenes MGAS3152
SPYO193567 ncbi Streptococcus pyogenes SSI-12
SPYO186103 ncbi Streptococcus pyogenes MGAS82322
SPYO160490 ncbi Streptococcus pyogenes M1 GAS2
SPNE488221 ncbi Streptococcus pneumoniae 705852
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-62
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-142
SPNE171101 ncbi Streptococcus pneumoniae R62
SPNE170187 ncbi Streptococcus pneumoniae G542
SPNE1313 Streptococcus pneumoniae2
SMUT210007 ncbi Streptococcus mutans UA1592
SMAR399550 ncbi Staphylothermus marinus F10
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14352
SGOR29390 Streptococcus gordonii Challis2
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SCO ncbi Streptomyces coelicolor A3(2)1
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SAGA211110 ncbi Streptococcus agalactiae NEM3162
SAGA208435 ncbi Streptococcus agalactiae 2603V/R2
SAGA205921 ncbi Streptococcus agalactiae A9092
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332092
RALB246199 Ruminococcus albus 81
PTOR263820 ncbi Picrophilus torridus DSM 97901
PSP117 Pirellula sp.2
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257452
PMOB403833 ncbi Petrotoga mobilis SJ952
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PAER178306 ncbi Pyrobaculum aerophilum IM21
PABY272844 ncbi Pyrococcus abyssi GE50
NSEN222891 ncbi Neorickettsia sennetsu Miyayama2
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 531
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS2
MSP164757 ncbi Mycobacterium sp. JLS2
MSP164756 ncbi Mycobacterium sp. MCS2
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP1
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-21
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN2
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2321
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53342
LSPH444177 ncbi Lysinibacillus sphaericus C3-412
LSAK314315 ncbi Lactobacillus sakei sakei 23K2
LREU557436 ncbi Lactobacillus reuteri DSM 200162
LPLA220668 ncbi Lactobacillus plantarum WCFS12
LMON265669 ncbi Listeria monocytogenes 4b F23652
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82932
LLAC272623 ncbi Lactococcus lactis lactis Il14032
LLAC272622 ncbi Lactococcus lactis cremoris SK112
LJOH257314 ncbi Lactobacillus johnsonii NCC 5332
LHEL405566 ncbi Lactobacillus helveticus DPC 45712
LGAS324831 ncbi Lactobacillus gasseri ATCC 333232
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118422
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3652
LCAS321967 ncbi Lactobacillus casei ATCC 3342
LBRE387344 ncbi Lactobacillus brevis ATCC 3672
LACI272621 ncbi Lactobacillus acidophilus NCFM2
KRAD266940 ncbi Kineococcus radiotolerans SRS302162
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
EFAE226185 ncbi Enterococcus faecalis V5832
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DRAD243230 ncbi Deinococcus radiodurans R11
DGEO319795 ncbi Deinococcus geothermalis DSM 113002
DETH243164 ncbi Dehalococcoides ethenogenes 1951
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS1
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPHY357809 ncbi Clostridium phytofermentans ISDg2
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130322
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CEFF196164 ncbi Corynebacterium efficiens YS-3142
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131292
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
BLON206672 ncbi Bifidobacterium longum NCC27052
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)2
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40182
AAUR290340 ncbi Arthrobacter aurescens TC12


Names of the homologs of the genes in the group in each of these orgs
  G6350   EG11893   EG11592   EG11591   EG11412   EG11255   EG10854   EG10607   EG10606   EG10203   EG10201   
UURE95667 UU469
UURE95664 UUR10_0526
UPAR505682
UMET351160
TWHI218496 TW0277TW0283
TWHI203267 TW469TW463
TVOL273116
TSP28240 TRQ2_0850TRQ2_0345
TPET390874 TPET_0827TPET_0327
TPEN368408
TMAR243274 TM_0097TM_0590
TKOD69014
TACI273075
STOK273063
STHE322159 STER_1583STER_1581
STHE299768 STR1619STR1617
STHE264199 STU1619STU1617
SSUI391296 SSU98_0360SSU98_0365
SSUI391295 SSU05_0369SSU05_0374
SSOL273057
SSAP342451 SSP1166
SPYO370554 MGAS10750_SPY0257MGAS10750_SPY0260
SPYO370553 MGAS2096_SPY0281MGAS2096_SPY0283
SPYO370552 MGAS10270_SPY0260MGAS10270_SPY0262
SPYO370551 MGAS9429_SPY0262MGAS9429_SPY0264
SPYO319701 M28_SPY0255M28_SPY0257
SPYO293653 M5005_SPY0263M5005_SPY0265
SPYO286636 M6_SPY0291M6_SPY0293
SPYO198466 SPYM3_0226SPYM3_0228
SPYO193567 SPS1634SPS1632
SPYO186103 SPYM18_0304SPYM18_0306
SPYO160490 SPY0308SPY0310
SPNE488221 SP70585_1786SP70585_1783
SPNE487214 SPH_1856SPH_1853
SPNE487213 SPT_1685SPT_1682
SPNE171101 SPR1592SPR1589
SPNE170187 SPN02052SPN02048
SPNE1313 SPJ_1643SPJ_1640
SMUT210007 SMU_1799SMU_1797C
SMAR399550
SHAE279808 SH1321SH1323
SGOR29390 SGO_0447SGO_0450
SEPI176280 SE_1280
SEPI176279 SERP1161
SCO SCO2579
SAUR93062 SACOL1650
SAUR93061 SAOUHSC_01697
SAUR426430 NWMN_1496
SAUR418127 SAHV_1581
SAUR367830 SAUSA300_1553
SAUR359787 SAURJH1_1686
SAUR359786 SAURJH9_1651
SAUR282459 SAS1531
SAUR282458 SAR1671
SAUR273036 SAB1466C
SAUR196620 MW1545
SAUR158879 SA1422
SAUR158878 SAV1594
SAGA211110 GBS1706GBS1703
SAGA208435 SAG_1662SAG_1659
SAGA205921 SAK_1674SAK_1671
SACI330779
RSAL288705 RSAL33209_3243RSAL33209_2442
RALB246199 GRAORF_4034
PTOR263820 PTO1260
PSP117 RB8455RB5749
PPEN278197 PEPE_0706PEPE_0708
PMOB403833 PMOB_1028PMOB_1422
PISL384616
PHOR70601
PFUR186497
PAST100379
PARS340102 PARS_1183
PAER178306 PAE2651
PABY272844
NSEN222891 NSE_0100NSE_0919
NPHA348780
MTHE349307
MTHE187420
MSYN262723 MS53_0319
MSTA339860
MSP189918 MKMS_3603MKMS_3377
MSP164757 MJLS_3535MJLS_3326
MSP164756 MMCS_3530MMCS_3315
MSED399549
MPUL272635 MYPU_3350
MPNE272634
MPEN272633 MYPE5200
MMYC272632
MMOB267748 MMOB2760
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631 ML1454ML0859
MLAB410358
MKAN190192
MJAN243232
MHYO295358 MHP474
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311 MFL373
MCAP340047
MBUR259564
MBAR269797
MART243272
MAEO419665
MACE188937
LWEL386043 LWE1501LWE1499
LSPH444177 BSPH_3849BSPH_3847
LSAK314315 LSA1391LSA1389
LREU557436 LREU_1235LREU_1233
LPLA220668 LP_1530LP_1532
LMON265669 LMOF2365_1507LMOF2365_1505
LMES203120 LEUM_1738LEUM_1736
LLAC272623 L106374L28204
LLAC272622 LACR_1200LACR_0234
LJOH257314 LJ_1636LJ_1634
LHEL405566 LHV_1593LHV_1591
LGAS324831 LGAS_1403LGAS_1401
LDEL390333 LDB1498LDB1496
LDEL321956 LBUL_1394LBUL_1392
LCAS321967 LSEI_1688LSEI_1686
LBRE387344 LVIS_1029LVIS_1027
LACI272621 LBA1530LBA1528
KRAD266940 KRAD_3450KRAD_3284
IHOS453591
HWAL362976
HSP64091
HSAL478009
HMUK485914
HMAR272569
HBUT415426
ERUM302409 ERGA_CDS_06580
ERUM254945 ERWE_CDS_06670
EFAE226185 EF_2871EF_2476
DSP255470 CBDBA3
DSP216389 DEHABAV1_0003
DRAD243230 DR_0764
DGEO319795 DGEO_1741DGEO_1086
DETH243164 DET_0003
CTRA471473 CTLON_0138
CTRA471472 CTL0138
CSUL444179 SMGWSS_001
CPRO264201 PC1239
CPNE182082 CPB0947
CPNE138677 CPJ0915
CPNE115713 CPN0915
CPNE115711 CP_0951
CPHY357809 CPHY_2546CPHY_2372
CMUR243161 TC_0150
CMET456442
CMAQ397948
CKOR374847
CGLU196627 CG2584CG2422
CFEL264202 CF0162
CEFF196164 CE2257CE2099
CDIP257309 DIP1775DIP1640
CCAV227941 CCA_00854
CABO218497 CAB819
BXEN266265
BLON206672 BL1032BL0965
BAPH372461 BCC_307BCC_169
AYEL322098
AURANTIMONAS
APER272557
ALAI441768
AFUL224325
ABUT367737 ABU_0976ABU_0996
AAUR290340 AAUR_2361AAUR_1748


Organism features enriched in list (features available for 164 out of the 174 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00054413992
Arrangment:Clusters 1.116e-81617
Arrangment:Singles 0.002119466286
Arrangment:Tetrads 0.006097844
Disease:Pharyngitis 0.000034688
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 6.812e-71111
Disease:Wide_range_of_infections 6.812e-71111
Disease:bronchitis_and_pneumonitis 0.000034688
Disease:endocarditis 0.006097844
Endospores:No 1.631e-23112211
Endospores:Yes 0.0000187353
GC_Content_Range4:0-40 2.500e-1093213
GC_Content_Range4:60-100 1.984e-718145
GC_Content_Range7:30-40 2.927e-874166
GC_Content_Range7:50-60 0.000030914107
GC_Content_Range7:60-70 3.268e-716134
Genome_Size_Range5:0-2 1.009e-1786155
Genome_Size_Range5:4-6 1.412e-1910184
Genome_Size_Range5:6-10 0.0001119347
Genome_Size_Range9:0-1 3.151e-61927
Genome_Size_Range9:1-2 2.283e-1167128
Genome_Size_Range9:2-3 0.000010353120
Genome_Size_Range9:3-4 0.00286851277
Genome_Size_Range9:4-5 6.718e-9696
Genome_Size_Range9:5-6 1.674e-9488
Genome_Size_Range9:6-8 0.0000351138
Gram_Stain:Gram_Neg 2.024e-2736333
Gram_Stain:Gram_Pos 2.126e-1378150
Habitat:Host-associated 0.008100269206
Habitat:Multiple 0.006732339178
Habitat:Specialized 0.00235112453
Motility:No 5.946e-1276151
Motility:Yes 2.977e-1042267
Optimal_temp.:- 1.985e-941257
Optimal_temp.:30-35 0.002356367
Optimal_temp.:30-37 7.420e-81618
Optimal_temp.:85 0.006097844
Oxygen_Req:Aerobic 3.120e-1022185
Oxygen_Req:Anaerobic 0.001344141102
Oxygen_Req:Facultative 0.000016778201
Pathogenic_in:Animal 0.00963331166
Pathogenic_in:No 0.007427975226
Pathogenic_in:Swine 0.001685155
Shape:Coccus 2.423e-226282
Shape:Irregular_coccus 2.319e-101717
Shape:Rod 4.106e-1950347
Shape:Sphere 3.468e-71619
Shape:Spiral 0.0001291134
Temp._range:Hyperthermophilic 4.183e-81923



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 24
Effective number of orgs (counting one per cluster within 468 clusters): 20

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CBUR360115 ncbi Coxiella burnetii RSA 331 0.000019499711
CBUR227377 ncbi Coxiella burnetii RSA 493 0.0000226101111
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-111 0.0000354105311
WPIP80849 Wolbachia endosymbiont of Brugia malayi 0.00003663338
AMAR234826 ncbi Anaplasma marginale St. Maries 0.00004843458
WPIP955 Wolbachia pipientis 0.00011023838
NEUR228410 ncbi Nitrosomonas europaea ATCC 19718 0.0003725130311
NEUT335283 ncbi Nitrosomonas eutropha C91 0.0003919130911
NMUL323848 ncbi Nitrosospira multiformis ATCC 25196 0.0006966137911
HHAL349124 ncbi Halorhodospira halophila SL1 0.0007022138011
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00133187559
MFLA265072 ncbi Methylobacillus flagellatus KT 0.0017888150211
TDEN292415 ncbi Thiobacillus denitrificans ATCC 25259 0.0018421150611
MCAP243233 ncbi Methylococcus capsulatus Bath 0.0018830150911
XFAS405440 ncbi Xylella fastidiosa M12 0.0040244117710
ILOI283942 ncbi Idiomarina loihiensis L2TR 0.0040378161711
XFAS183190 ncbi Xylella fastidiosa Temecula1 0.0044434118910
XFAS160492 ncbi Xylella fastidiosa 9a5c 0.0055317121610
SDEG203122 ncbi Saccharophagus degradans 2-40 0.0058017167111
HARS204773 ncbi Herminiimonas arsenicoxydans 0.0068345169611
ASP76114 ncbi Aromatoleum aromaticum EbN1 0.0075805171211
CJAP155077 Cellvibrio japonicus 0.0080319172111
DNOD246195 ncbi Dichelobacter nodosus VCS1703A 0.00970769499
BPER257313 ncbi Bordetella pertussis Tohama I 0.0099666175511


Names of the homologs of the genes in the group in each of these orgs
  G6350   EG11893   EG11592   EG11591   EG11412   EG11255   EG10854   EG10607   EG10606   EG10203   EG10201   
CBUR360115 COXBURSA331_A0670COXBURSA331_A1408COXBURSA331_A1409COXBURSA331_A1413COXBURSA331_A0671COXBURSA331_A0666COXBURSA331_A0952COXBURSA331_A0663COXBURSA331_A0664COXBURSA331_A1408COXBURSA331_A1408
CBUR227377 CBU_0556CBU_1261CBU_1262CBU_1265CBU_0557CBU_0552CBU_0987CBU_0549CBU_0550CBU_1261CBU_1261
CBUR434922 COXBU7E912_1509COXBU7E912_1345COXBU7E912_1346COXBU7E912_1350COXBU7E912_1508COXBU7E912_1511COXBU7E912_1060COXBU7E912_1514COXBU7E912_1513COXBU7E912_1345COXBU7E912_1345
WPIP80849 WB_0447WB_0369WB_0383WB_0192WB_0023WB_0118WB_0447WB_0447
AMAR234826 AM1091AM941AM980AM590AM005AM1196AM1091AM1091
WPIP955 WD_0098WD_1014WD_1117WD_0496WD_1108WD_0719WD_0098WD_0098
NEUR228410 NE0359NE1485NE1487NE1488NE1137NE0358NE2065NE2066NE2067NE1485NE1485
NEUT335283 NEUT_1610NEUT_0761NEUT_0759NEUT_0758NEUT_1427NEUT_1611NEUT_1587NEUT_1588NEUT_1589NEUT_0761NEUT_0761
NMUL323848 NMUL_A0360NMUL_A1991NMUL_A1989NMUL_A1988NMUL_A0513NMUL_A0361NMUL_A0315NMUL_A0316NMUL_A0317NMUL_A1991NMUL_A1991
HHAL349124 HHAL_2141HHAL_1012HHAL_1014HHAL_1015HHAL_2143HHAL_2140HHAL_1011HHAL_1009HHAL_1008HHAL_1012HHAL_1012
CRUT413404 RMAG_0327RMAG_0470RMAG_0542RMAG_0134RMAG_0326RMAG_0471RMAG_0797RMAG_0470RMAG_0470
MFLA265072 MFLA_2159MFLA_2497MFLA_2499MFLA_2500MFLA_2157MFLA_0593MFLA_2496MFLA_2495MFLA_2494MFLA_2497MFLA_2497
TDEN292415 TBD_2441TBD_0647TBD_0268TBD_0269TBD_2443TBD_2440TBD_0265TBD_0264TBD_0263TBD_0647TBD_0647
MCAP243233 MCA_1879MCA_0105MCA_0107MCA_0109MCA_1451MCA_2027MCA_2972MCA_0104MCA_0103MCA_0105MCA_0105
XFAS405440 XFASM12_1379XFASM12_1430XFASM12_0600XFASM12_1378XFASM12_1380XFASM12_1386XFASM12_0672XFASM12_0671XFASM12_1430XFASM12_1430
ILOI283942 IL0950IL0957IL0958IL0959IL0949IL0951IL0956IL0954IL0953IL0957IL0957
XFAS183190 PD_1233PD_1277PD_0531PD_1232PD_1234PD_1236PD_0561PD_0560PD_1277PD_1277
XFAS160492 XF2179XF2230XF1270XF2178XF2180XF2185XF1313XF1312XF2230XF2230
SDEG203122 SDE_3344SDE_3337SDE_3336SDE_3335SDE_3310SDE_3343SDE_3338SDE_3340SDE_3341SDE_3337SDE_3337
HARS204773 HEAR0555HEAR2999HEAR3001HEAR3002HEAR2663HEAR0554HEAR0173HEAR0172HEAR0171HEAR2999HEAR2999
ASP76114 EBA3972EBA3044EBD70EBA3048EBA4383EBA3971EBA3043EBA3041EBA3040EBA3044EBA3044
CJAP155077 CJA_0786CJA_0793CJA_0795CJA_0796CJA_0452CJA_0787CJA_0792CJA_0790CJA_0789CJA_0793CJA_0793
DNOD246195 DNO_0899DNO_0897DNO_0244DNO_0467DNO_0961DNO_0963DNO_0964DNO_0899DNO_0899
BPER257313 BP2311BP0102BP0104BP0105BP2042BP2312BP0689BP0378BP0377BP0102BP0102


Organism features enriched in list (features available for 21 out of the 24 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Citrus_variegated_chlorosis 0.001237822
Disease:Q_fever 0.001237822
Endospores:No 0.00081441211
GC_Content_Range4:0-40 0.00073601213
GC_Content_Range4:40-60 0.001484915224
GC_Content_Range7:30-40 0.00665691166
Genome_Size_Range5:2-4 0.000313315197
Genome_Size_Range9:2-3 0.000161112120
Optimal_temp.:26-28 0.001237822
Shape:Coccobacillus 0.0003361411



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181530.6871
GLYCOCAT-PWY (glycogen degradation I)2461560.6349
AST-PWY (arginine degradation II (AST pathway))1201030.6275
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001710.6199
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951300.5794
PWY-1269 (CMP-KDO biosynthesis I)3251720.5770
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761220.5756
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251390.5636
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911600.5602
PWY-5918 (heme biosynthesis I)2721540.5588
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961610.5568
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901590.5552
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911250.5527
PWY-4041 (γ-glutamyl cycle)2791550.5504
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861560.5423
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481720.5340
PWY-5386 (methylglyoxal degradation I)3051600.5310
GLUCONSUPER-PWY (D-gluconate degradation)2291360.5309
PWY-5913 (TCA cycle variation IV)3011580.5249
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81720.5230
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391680.5219
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831170.5143
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491400.5108
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491400.5108
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491020.5036
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911170.4907
LIPASYN-PWY (phospholipases)2121240.4858
PWY-5148 (acyl-CoA hydrolysis)2271280.4767
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291580.4692
GALACTITOLCAT-PWY (galactitol degradation)73620.4608
PWY0-981 (taurine degradation IV)106780.4584
TYRFUMCAT-PWY (tyrosine degradation I)1841100.4565
GLUCARDEG-PWY (D-glucarate degradation I)152960.4433
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551320.4385
DAPLYSINESYN-PWY (lysine biosynthesis I)3421570.4373
KDOSYN-PWY (KDO transfer to lipid IVA I)1801060.4368
POLYISOPRENSYN-PWY (polyisoprenoid biosynthesis (E. coli))116800.4350
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94700.4350
PWY0-1182 (trehalose degradation II (trehalase))70580.4336
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3981700.4327
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791050.4319
PWY-3162 (tryptophan degradation V (side chain pathway))94690.4250
P601-PWY (D-camphor degradation)95690.4204
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4221730.4161
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96690.4158
REDCITCYC (TCA cycle variation II)1741010.4149
PWY-5669 (phosphatidylethanolamine biosynthesis I)4161710.4106
PWY-6134 (tyrosine biosynthesis IV)89650.4082
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50450.4069
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001410.4055
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112750.4049
PWY-5084 (2-ketoglutarate dehydrogenase complex)3261480.4035
PWY-5783 (octaprenyl diphosphate biosynthesis)165960.4019



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11893   EG11592   EG11591   EG11412   EG11255   EG10854   EG10607   EG10606   EG10203   EG10201   
G63500.9987010.9986820.9988680.9994910.999960.9990810.9993110.9992540.9985680.998986
EG118930.9996750.9996780.9986730.9988550.9997640.9994550.9993810.9999790.999979
EG115920.9997860.9986560.9990690.9994580.9994460.9993660.9996620.999733
EG115910.9989090.9988990.9994340.9993970.9993390.9996690.999725
EG114120.9993740.9990410.9991250.9990250.9985170.999
EG112550.9991350.9993790.9993280.9987710.999072
EG108540.9996710.9996160.9997540.999794
EG106070.9999350.9994250.999549
EG106060.9993190.999432
EG102030.999981
EG10201



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PAIRWISE BLAST SCORES:

  G6350   EG11893   EG11592   EG11591   EG11412   EG11255   EG10854   EG10607   EG10606   EG10203   EG10201   
G63500.0f0----------
EG11893-0.0f0-------1.7e-943.1e-95
EG11592--0.0f0--------
EG11591---0.0f0-------
EG11412----0.0f0------
EG11255-----0.0f0-----
EG10854------0.0f0----
EG10607-------0.0f0---
EG10606--------0.0f0--
EG10203-5.7e-87-------0.0f01.1e-120
EG10201-3.1e-95-------1.5e-1270.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10201 EG10606 EG10607 EG10854 EG11255 EG11412 EG11591 EG11592 G6350 (centered at EG10607)
EG11893 (centered at EG11893)
EG10203 (centered at EG10203)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6350   EG11893   EG11592   EG11591   EG11412   EG11255   EG10854   EG10607   EG10606   EG10203   EG10201   
400/623293/623148/623382/623193/623406/623310/623351/623363/623299/623298/623
AAEO224324:0:Tyes8----8879630824--
AAUR290340:2:Tyes597--0-------
AAVE397945:0:Tyes-35676641792858369354003535
ABAC204669:0:Tyes0--4321-1259214561455--
ABAU360910:0:Tyes20780232367207930323045304600
ABOR393595:0:Tyes310-14049761010
ABUT367737:0:Tyes------0-20--
ACAU438753:0:Tyes-1-676-19870--11
ACEL351607:0:Tyes11--176---10--
ACRY349163:8:Tyes-0-2045--72240840700
ADEH290397:0:Tyes2214--1624-0379623032304--
AEHR187272:0:Tyes2314-722923231044
AFER243159:0:Tyes1370-3682381028371372370370
AHYD196024:0:Tyes1910110285499
AMAR234826:0:Tyes-783-682-7084230859783783
AMAR329726:9:Tyes---2628--010072975--
AMET293826:0:Tyes9211137-3041-925-0-1137-
ANAE240017:0:Tyes0--389-2-----
AORE350688:0:Tyes1580-----5101720-
APHA212042:0:Tyes-946-33-0---946946
APLE416269:0:Tyes-7537527510758754755756753753
APLE434271:0:Tno-7807797780785781782783780780
ASAL382245:5:Tyes82109734522
ASP1667:3:Tyes775--0-773-----
ASP232721:2:Tyes-30585735861609375330803030
ASP62928:0:Tyes34913563096349221033
ASP62977:0:Tyes-1211691169218561831109310910121121
ASP76114:2:Tyes54535678754421033
AVAR240292:3:Tyes1359--2928--036291344--
BABO262698:0:Tno---0-------
BABO262698:1:Tno-1---8060--11
BAFZ390236:2:Fyes70-----17-0--
BAMB339670:3:Tno2204281828162813371220503044304328182818
BAMB398577:3:Tno2038263326312628376203902879287826332633
BAMY326423:0:Tyes19551720---1953-1069017201720
BANT260799:0:Tno21311888---2129-1665018881888
BANT261594:2:Tno21381889---2136-1649018891889
BANT568206:2:Tyes39303676---3928-0176636763676
BANT592021:2:Tno22542000---2252-1761020002000
BAPH198804:0:Tyes167-2100166------
BAPH372461:0:Tyes--1350-------
BBAC264462:0:Tyes28501184-0---156715661184-
BBAC360095:0:Tyes---543-0471----
BBRO257310:0:Tyes17180233231171743874400440100
BBUR224326:21:Fno65-----17-0--
BCAN483179:0:Tno---0-------
BCAN483179:1:Tno-1---8380--11
BCEN331271:2:Tno15352132213021270153626842352235121322132
BCEN331272:3:Tyes2008260125992596369200902822282126012601
BCER226900:1:Tyes20851836---2083-1674018361836
BCER288681:0:Tno20441798---2042-1638017981798
BCER315749:1:Tyes13341057---1332-845010571057
BCER405917:1:Tyes20251766---2023-1588017661766
BCER572264:1:Tno20941843---2092-1674018431843
BCIC186490:0:Tyes1--40--32--
BCLA66692:0:Tyes0157---2-721-157157
BFRA272559:1:Tyes2741--1322-0-31463147--
BFRA295405:0:Tno2970--1267-0-33723373--
BGAR290434:2:Fyes66-----17-0--
BHAL272558:0:Tyes0213---2-12442082213213
BHEN283166:0:Tyes-649-593-0648--649649
BHER314723:0:Fyes67-----18-0--
BJAP224911:0:Fyes-4114-4860-04116--41144114
BLIC279010:0:Tyes20481798---2046-083217981798
BLON206672:0:Tyes64----0-----
BMAL243160:1:Tno163353021471634256810010155
BMAL320388:1:Tno84053014983931082515251455
BMAL320389:1:Tyes12776277427712234025591967196827762776
BMEL224914:0:Tno---0-------
BMEL224914:1:Tno-799---0800--799799
BMEL359391:0:Tno---0-------
BMEL359391:1:Tno-1---7780--11
BOVI236:0:Tyes---0-------
BOVI236:1:Tyes-1---7280--11
BPAR257311:0:Tno21600231495215937123724372500
BPER257313:0:Tyes19700231727197152224624500
BPET94624:0:Tyes269329194423442229252694121044252919
BPSE272560:1:Tyes9802252272302769979311201225225
BPSE320372:1:Tno1399610612614354813980333334610610
BPSE320373:1:Tno1035267-27131331034352301267267
BPUM315750:0:Tyes873654---871-0-654654
BQUI283165:0:Tyes-0-40--1--00
BSP107806:2:Tyes175-2170174------
BSP36773:2:Tyes2285290229002897364228603131313029022902
BSP376:0:Tyes-3220-2686-03216--32203220
BSUB:0:Tyes22762052---2274-1189020522052
BSUI204722:0:Tyes---0-------
BSUI204722:1:Tyes8241---8230--11
BSUI470137:0:Tno---0-694-----
BSUI470137:1:Tno-1----0--11
BTHA271848:1:Tno8672382402431061866294601238238
BTHE226186:0:Tyes942--0-2977-27782777--
BTHU281309:1:Tno20351784---2033-1622017841784
BTHU412694:1:Tno18291609---1827-1461016091609
BTRI382640:1:Tyes-875-1161-0874--875875
BTUR314724:0:Fyes66-----18-0--
BVIE269482:7:Tyes2119271827162713374212002927292627182718
BWEI315730:4:Tyes20571786---2055-1619017861786
CABO218497:0:Tyes-----0-----
CACE272562:1:Tyes14803-----30803803
CAULO:0:Tyes---635-190927810--
CBEI290402:0:Tyes0------1056137013441344
CBLO203907:0:Tyes----32-01--
CBLO291272:0:Tno----32-01--
CBOT36826:1:Tno23431214-----0-12141214
CBOT441770:0:Tyes23111122-----0-11221122
CBOT441771:0:Tno1228176-----0-176176
CBOT441772:1:Tno22881143-----0-11431143
CBOT498213:1:Tno23641153-----0-11531153
CBOT508765:1:Tyes0------18413417661766
CBOT515621:2:Tyes25051316-----0-13161316
CBOT536232:0:Tno25701249-----0-12491249
CBUR227377:1:Tyes66766776807241501676676
CBUR360115:1:Tno66876886927226801687687
CBUR434922:2:Tno4312722732774304330436435272272
CCAV227941:1:Tyes-----0-----
CCHL340177:0:Tyes-----016084881084--
CCON360104:2:Tyes------71880--
CCUR360105:0:Tyes------13021--
CDES477974:0:Tyes644177---642-2352391770
CDIF272563:1:Tyes1394141---1392-0-141141
CDIP257309:0:Tyes134--0-------
CEFF196164:0:Fyes161--0-------
CFEL264202:1:Tyes-----0-----
CFET360106:0:Tyes------8390--
CGLU196627:0:Tyes153--0-------
CHOM360107:1:Tyes------09698--
CHUT269798:0:Tyes131--0-1451732-2793--
CHYD246194:0:Tyes421577---45-13015771577
CJAP155077:0:Tyes3193263283290320325323322326326
CJEI306537:0:Tyes0--146-1-----
CJEJ192222:0:Tyes------06156--
CJEJ195099:0:Tno------06436--
CJEJ354242:2:Tyes------06066--
CJEJ360109:0:Tyes------8580852--
CJEJ407148:0:Tno------06376--
CKLU431943:1:Tyes10--1385---01843371371
CMIC31964:2:Tyes2--68-0-----
CMIC443906:2:Tyes293--0-295-----
CMUR243161:1:Tyes-----0-----
CNOV386415:0:Tyes4850-------0-
CPEL335992:0:Tyes-778-870-0-11551156778778
CPER195102:1:Tyes325------336-00
CPER195103:0:Tno313------324-00
CPER289380:3:Tyes311------52-00
CPHY357809:0:Tyes174-------0--
CPNE115711:1:Tyes-----0-----
CPNE115713:0:Tno-----0-----
CPNE138677:0:Tno-----0-----
CPNE182082:0:Tno-----0-----
CPRO264201:0:Fyes-----0-----
CPSY167879:0:Tyes821010734522
CRUT413404:0:Tyes181312-3800180-313612312312
CSAL290398:0:Tyes0789818164377
CSP501479:6:Fyes-----210-10--
CSP501479:8:Fyes-1991-0-----19911991
CSP78:2:Tyes---1685-326012110273-1669
CSUL444179:0:Tyes---0-------
CTEP194439:0:Tyes0----1242033273544--
CTET212717:0:Tyes475------48648900
CTRA471472:0:Tyes-----0-----
CTRA471473:0:Tno-----0-----
CVES412965:0:Tyes164282-3460--283565282282
CVIO243365:0:Tyes1226472648264901139893966396526472647
DARO159087:0:Tyes5818318118044059012183183
DDES207559:0:Tyes1130--2233-12570480481--
DETH243164:0:Tyes0----------
DGEO319795:1:Tyes---651--0----
DHAF138119:0:Tyes8600---858-87187500
DNOD246195:0:Tyes-633-6310217692694695633633
DOLE96561:0:Tyes0----12614513512--
DPSY177439:2:Tyes2361--0-23911748812811--
DRAD243230:3:Tyes---0-------
DRED349161:0:Tyes1911488-0-1908-19361940488488
DSHI398580:5:Tyes-854-2333-0-514515854854
DSP216389:0:Tyes0----------
DSP255470:0:Tno0----------
DVUL882:1:Tyes1550--506-121603853862245-
ECAN269484:0:Tyes-219-0-----219219
ECAR218491:0:Tyes82109734513932
ECHA205920:0:Tyes-661-0-----661661
ECOL199310:0:Tno101775101184562042
ECOL316407:0:Tno91390101073452062
ECOL331111:6:Tno101581101184562402
ECOL362663:0:Tno91392101073451942
ECOL364106:1:Tno102101173452102
ECOL405955:2:Tyes913951010-3451812
ECOL409438:6:Tyes111616101284562142
ECOL413997:0:Tno91316101073452182
ECOL439855:4:Tno9385101073452002
ECOL469008:0:Tno13450135313541344134713511350134911151352
ECOL481805:0:Tno13780138613871377138013841383138211641385
ECOL585034:0:Tno91455101073452702
ECOL585035:0:Tno91381101073451922
ECOL585055:0:Tno91633101073452612
ECOL585056:2:Tno91642101073453152
ECOL585057:0:Tno9424101073452302
ECOL585397:0:Tno91680101073451862
ECOL83334:0:Tno92196101073452642
ECOLI:0:Tno91416101073452082
ECOO157:0:Tno92216101073452642
EFAE226185:3:Tyes368-------0--
EFER585054:1:Tyes14781484148514861477147914831482148101484
ELIT314225:0:Tyes-1181-0-2600151310921093-1181
ERUM254945:0:Tyes---0-------
ERUM302409:0:Tno---0-------
ESP42895:1:Tyes8142910973451772
FALN326424:0:Tyes17--3181-18-10--
FJOH376686:0:Tyes551--1745--0-1268--
FMAG334413:1:Tyes8------3890--
FNOD381764:0:Tyes-----0-675558--
FNUC190304:0:Tyes105------0184--
FPHI484022:1:Tyes-10961095109401059---10961096
FRANT:0:Tno-777-7790841---777777
FSP106370:0:Tyes18--924-19-10--
FSP1855:0:Tyes3406--0-3405--3425--
FSUC59374:0:Tyes------5410--
FTUL351581:0:Tno-2-074735---22
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