CANDIDATE ID: 107

CANDIDATE ID: 107

NUMBER OF GENES: 11
AVERAGE SCORE:    9.9946356e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG11199 (mioC) (b3742)
   Products of gene:
     - EG11199-MONOMER (flavoprotein involved in biotin synthesis)

- EG10376 (rsmG) (b3740)
   Products of gene:
     - EG10376-MONOMER (16S rRNA m7G527 methyltransferase)
       Reactions:
        S-adenosyl-L-methionine + guanine527 in 16S rRNA  ->  S-adenosyl-L-homocysteine + N7-methylguanine527 in 16S rRNA

- EG10375 (mnmG) (b3741)
   Products of gene:
     - EG10375-MONOMER (protein involved in a tRNA modification pathway)
     - CPLX0-7597 (protein involved in a tRNA modification pathway)
     - CPLX0-7609 (complex involved in modification of tRNA)

- EG10106 (atpI) (b3739)
   Products of gene:
     - EG10106-MONOMER (AtpI)

- EG10105 (atpH) (b3735)
   Products of gene:
     - ATPH-MONOMER (ATP synthase, F1 complex, δ subunit)
     - F-1-CPLX (ATP synthase, F1 complex)
     - ATPSYN-CPLX (ATP synthase)
       Reactions:
        ATP + H2O + H+[cytosol]  =  phosphate + ADP + H+[periplasmic space]
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-6126 (adenosine nucleotides de novo biosynthesis)

- EG10104 (atpG) (b3733)
   Products of gene:
     - ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)
     - F-1-CPLX (ATP synthase, F1 complex)
     - ATPSYN-CPLX (ATP synthase)
       Reactions:
        ATP + H2O + H+[cytosol]  =  phosphate + ADP + H+[periplasmic space]
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-6126 (adenosine nucleotides de novo biosynthesis)

- EG10103 (atpF) (b3736)
   Products of gene:
     - ATPF-MONOMER (ATP synthase, F0 complex, b subunit)
     - ATPF-CPLX (b subunit complex)
     - F-O-CPLX (ATP synthase, F0 complex)
     - ATPSYN-CPLX (ATP synthase)
       Reactions:
        ATP + H2O + H+[cytosol]  =  phosphate + ADP + H+[periplasmic space]
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-6126 (adenosine nucleotides de novo biosynthesis)

- EG10102 (atpE) (b3737)
   Products of gene:
     - ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
     - ATPE-CPLX (c subunit complex)
     - F-O-CPLX (ATP synthase, F0 complex)
     - ATPSYN-CPLX (ATP synthase)
       Reactions:
        ATP + H2O + H+[cytosol]  =  phosphate + ADP + H+[periplasmic space]
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-6126 (adenosine nucleotides de novo biosynthesis)

- EG10100 (atpC) (b3731)
   Products of gene:
     - ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
     - F-1-CPLX (ATP synthase, F1 complex)
     - ATPSYN-CPLX (ATP synthase)
       Reactions:
        ATP + H2O + H+[cytosol]  =  phosphate + ADP + H+[periplasmic space]
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-6126 (adenosine nucleotides de novo biosynthesis)

- EG10099 (atpB) (b3738)
   Products of gene:
     - ATPB-MONOMER (ATP synthase, F0 complex, a subunit)
     - F-O-CPLX (ATP synthase, F0 complex)
     - ATPSYN-CPLX (ATP synthase)
       Reactions:
        ATP + H2O + H+[cytosol]  =  phosphate + ADP + H+[periplasmic space]
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-6126 (adenosine nucleotides de novo biosynthesis)

- EG10098 (atpA) (b3734)
   Products of gene:
     - ATPA-MONOMER (ATP synthase, F1 complex, α subunit)
     - ATPA-CPLX (α subunit complex)
     - F-1-CPLX (ATP synthase, F1 complex)
     - ATPSYN-CPLX (ATP synthase)
       Reactions:
        ATP + H2O + H+[cytosol]  =  phosphate + ADP + H+[periplasmic space]
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-6126 (adenosine nucleotides de novo biosynthesis)



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ORGANISMS CONTAINING AT LEAST 9 GENES FROM THE GROUP:

Total number of orgs: 205
Effective number of orgs (counting one per cluster within 468 clusters): 120

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175811
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295311
YPES386656 ncbi Yersinia pestis Pestoides F11
YPES377628 ncbi Yersinia pestis Nepal51611
YPES360102 ncbi Yersinia pestis Antiqua11
YPES349746 ncbi Yersinia pestis Angola11
YPES214092 ncbi Yersinia pestis CO9211
YPES187410 ncbi Yersinia pestis KIM 1011
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808111
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A10
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 31101810
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC1033110
XFAS405440 ncbi Xylella fastidiosa M1210
XFAS183190 ncbi Xylella fastidiosa Temecula110
XFAS160492 ncbi Xylella fastidiosa 9a5c10
XCAM487884 Xanthomonas campestris pv. paulliniae10
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-1010
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 800410
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 3391310
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 30610
VVUL216895 ncbi Vibrio vulnificus CMCP610
VVUL196600 ncbi Vibrio vulnificus YJ01611
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 221063311
VFIS312309 ncbi Vibrio fischeri ES11411
VEIS391735 ncbi Verminephrobacter eiseniae EF01-29
VCHO345073 ncbi Vibrio cholerae O39511
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N1696111
TTUR377629 ncbi Teredinibacter turnerae T790110
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252599
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT211
SSP94122 ncbi Shewanella sp. ANA-311
SSON300269 ncbi Shigella sonnei Ss04611
SSED425104 ncbi Shewanella sediminis HAW-EB311
SPRO399741 ncbi Serratia proteamaculans 56811
SPEA398579 ncbi Shewanella pealeana ATCC 70034511
SONE211586 ncbi Shewanella oneidensis MR-111
SLOI323850 ncbi Shewanella loihica PV-411
SHIGELLA ncbi Shigella flexneri 2a str. 2457T11
SHAL458817 ncbi Shewanella halifaxensis HAW-EB411
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14359
SGLO343509 ncbi Sodalis glossinidius morsitans11
SFLE373384 ncbi Shigella flexneri 5 str. 840111
SFLE198214 ncbi Shigella flexneri 2a str. 30111
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47611
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6711
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 915011
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1811
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty211
SDYS300267 ncbi Shigella dysenteriae Sd19711
SDEN318161 ncbi Shewanella denitrificans OS21710
SDEG203122 ncbi Saccharophagus degradans 2-4010
SBOY300268 ncbi Shigella boydii Sb22710
SBAL402882 ncbi Shewanella baltica OS18511
SBAL399599 ncbi Shewanella baltica OS19511
SAUR93062 ncbi Staphylococcus aureus aureus COL9
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83259
SAUR426430 ncbi Staphylococcus aureus aureus Newman9
SAUR418127 ncbi Staphylococcus aureus aureus Mu39
SAUR367830 Staphylococcus aureus aureus USA3009
SAUR359787 ncbi Staphylococcus aureus aureus JH19
SAUR359786 ncbi Staphylococcus aureus aureus JH99
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4769
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2529
SAUR273036 ncbi Staphylococcus aureus RF1229
SAUR196620 ncbi Staphylococcus aureus aureus MW29
SAUR158879 ncbi Staphylococcus aureus aureus N3159
SAUR158878 ncbi Staphylococcus aureus aureus Mu509
RFER338969 ncbi Rhodoferax ferrireducens T1189
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC300010
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a10
PSTU379731 ncbi Pseudomonas stutzeri A150110
PSP56811 Psychrobacter sp.9
PSP296591 ncbi Polaromonas sp. JS66610
PPUT76869 ncbi Pseudomonas putida GB-110
PPUT351746 ncbi Pseudomonas putida F110
PPUT160488 ncbi Pseudomonas putida KT244010
PPRO298386 ncbi Photobacterium profundum SS910
PNAP365044 ncbi Polaromonas naphthalenivorans CJ210
PMUL272843 ncbi Pasteurella multocida multocida Pm7010
PMEN399739 ncbi Pseudomonas mendocina ymp10
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO111
PING357804 ncbi Psychromonas ingrahamii 3710
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC12510
PFLU220664 ncbi Pseudomonas fluorescens Pf-510
PFLU216595 ncbi Pseudomonas fluorescens SBW2510
PFLU205922 ncbi Pseudomonas fluorescens Pf0-110
PENT384676 ncbi Pseudomonas entomophila L4810
PCRY335284 ncbi Psychrobacter cryohalolentis K59
PATL342610 ncbi Pseudoalteromonas atlantica T6c10
PARC259536 ncbi Psychrobacter arcticus 273-49
PAER208964 ncbi Pseudomonas aeruginosa PAO110
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA1410
OIHE221109 ncbi Oceanobacillus iheyensis HTE8319
NOCE323261 ncbi Nitrosococcus oceani ATCC 1970710
NMUL323848 ncbi Nitrosospira multiformis ATCC 251969
NMEN374833 ncbi Neisseria meningitidis 0534429
NMEN272831 ncbi Neisseria meningitidis FAM189
NMEN122587 ncbi Neisseria meningitidis Z24919
NMEN122586 ncbi Neisseria meningitidis MC589
NEUT335283 ncbi Nitrosomonas eutropha C9110
NEUR228410 ncbi Nitrosomonas europaea ATCC 1971810
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E10
MSP400668 ncbi Marinomonas sp. MWYL19
MPET420662 ncbi Methylibium petroleiphilum PM110
MFLA265072 ncbi Methylobacillus flagellatus KT10
MCAP243233 ncbi Methylococcus capsulatus Bath9
MAQU351348 ncbi Marinobacter aquaeolei VT810
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53349
LPNE400673 ncbi Legionella pneumophila Corby9
LPNE297246 ncbi Legionella pneumophila Paris9
LPNE297245 ncbi Legionella pneumophila Lens9
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 19
LMON265669 ncbi Listeria monocytogenes 4b F23659
LMON169963 ncbi Listeria monocytogenes EGD-e9
LINN272626 ncbi Listeria innocua Clip112629
LCHO395495 ncbi Leptothrix cholodnii SP-69
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857811
JSP375286 ncbi Janthinobacterium sp. Marseille10
ILOI283942 ncbi Idiomarina loihiensis L2TR10
HSOM228400 ncbi Haemophilus somnus 233610
HSOM205914 ncbi Haemophilus somnus 129PT10
HINF71421 ncbi Haemophilus influenzae Rd KW2010
HINF374930 ncbi Haemophilus influenzae PittEE10
HINF281310 ncbi Haemophilus influenzae 86-028NP10
HHAL349124 ncbi Halorhodospira halophila SL110
HDUC233412 ncbi Haemophilus ducreyi 35000HP10
HCHE349521 ncbi Hahella chejuensis KCTC 239610
HARS204773 ncbi Herminiimonas arsenicoxydans10
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-29
GKAU235909 ncbi Geobacillus kaustophilus HTA4269
ESP42895 Enterobacter sp.11
EFER585054 ncbi Escherichia fergusonii ATCC 3546911
ECOO157 ncbi Escherichia coli O157:H7 EDL93311
ECOL83334 Escherichia coli O157:H711
ECOL585397 ncbi Escherichia coli ED1a11
ECOL585057 ncbi Escherichia coli IAI3911
ECOL585056 ncbi Escherichia coli UMN02611
ECOL585055 ncbi Escherichia coli 5598911
ECOL585035 ncbi Escherichia coli S8811
ECOL585034 ncbi Escherichia coli IAI111
ECOL481805 ncbi Escherichia coli ATCC 873911
ECOL469008 ncbi Escherichia coli BL21(DE3)11
ECOL439855 ncbi Escherichia coli SMS-3-511
ECOL413997 ncbi Escherichia coli B str. REL60610
ECOL409438 ncbi Escherichia coli SE1111
ECOL364106 ncbi Escherichia coli UTI8911
ECOL362663 ncbi Escherichia coli 53611
ECOL331111 ncbi Escherichia coli E24377A10
ECOL316407 ncbi Escherichia coli K-12 substr. W311011
ECOL199310 ncbi Escherichia coli CFT07311
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104311
DNOD246195 ncbi Dichelobacter nodosus VCS1703A9
DARO159087 ncbi Dechloromonas aromatica RCB9
CVIO243365 ncbi Chromobacterium violaceum ATCC 124729
CSAL290398 ncbi Chromohalobacter salexigens DSM 304310
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)9
CPSY167879 ncbi Colwellia psychrerythraea 34H10
CJAP155077 Cellvibrio japonicus10
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1119
CBUR360115 ncbi Coxiella burnetii RSA 3319
CBUR227377 ncbi Coxiella burnetii RSA 4939
BWEI315730 ncbi Bacillus weihenstephanensis KBAB49
BVIE269482 ncbi Burkholderia vietnamiensis G410
BTHU412694 ncbi Bacillus thuringiensis Al Hakam9
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-279
BTHA271848 ncbi Burkholderia thailandensis E26410
BSUB ncbi Bacillus subtilis subtilis 1689
BSP36773 Burkholderia sp.10
BPUM315750 ncbi Bacillus pumilus SAFR-0329
BPSE320373 ncbi Burkholderia pseudomallei 66810
BPSE320372 ncbi Burkholderia pseudomallei 1710b10
BPSE272560 ncbi Burkholderia pseudomallei K9624310
BPET94624 Bordetella petrii10
BPER257313 ncbi Bordetella pertussis Tohama I10
BPAR257311 ncbi Bordetella parapertussis 1282210
BMAL320389 ncbi Burkholderia mallei NCTC 1024710
BMAL320388 ncbi Burkholderia mallei SAVP110
BMAL243160 ncbi Burkholderia mallei ATCC 2334410
BLIC279010 ncbi Bacillus licheniformis ATCC 145809
BHAL272558 ncbi Bacillus halodurans C-1259
BCLA66692 ncbi Bacillus clausii KSM-K169
BCER572264 ncbi Bacillus cereus 03BB1029
BCER405917 Bacillus cereus W9
BCEN331272 ncbi Burkholderia cenocepacia HI242410
BCEN331271 ncbi Burkholderia cenocepacia AU 105410
BBRO257310 ncbi Bordetella bronchiseptica RB5010
BANT592021 ncbi Bacillus anthracis A02489
BANT568206 ncbi Bacillus anthracis CDC 6849
BANT261594 ncbi Bacillus anthracis Ames Ancestor9
BANT260799 ncbi Bacillus anthracis Sterne9
BAMY326423 ncbi Bacillus amyloliquefaciens FZB429
BAMB398577 ncbi Burkholderia ambifaria MC40-610
BAMB339670 ncbi Burkholderia ambifaria AMMD10
ASP76114 ncbi Aromatoleum aromaticum EbN19
ASP62977 ncbi Acinetobacter sp. ADP19
ASP62928 ncbi Azoarcus sp. BH729
ASP232721 ncbi Acidovorax sp. JS429
ASAL382245 ncbi Aeromonas salmonicida salmonicida A44910
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL0310
APLE416269 ncbi Actinobacillus pleuropneumoniae L2010
AHYD196024 Aeromonas hydrophila dhakensis10
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-110
ABOR393595 ncbi Alcanivorax borkumensis SK210
ABAU360910 ncbi Bordetella avium 197N9
AAVE397945 ncbi Acidovorax citrulli AAC00-110


Names of the homologs of the genes in the group in each of these orgs
  EG11199   EG10376   EG10375   EG10106   EG10105   EG10104   EG10103   EG10102   EG10100   EG10099   EG10098   
YPSE349747 YPSIP31758_0001YPSIP31758_4184YPSIP31758_4186YPSIP31758_4183YPSIP31758_4179YPSIP31758_4177YPSIP31758_4180YPSIP31758_4181YPSIP31758_4175YPSIP31758_4182YPSIP31758_4178
YPSE273123 YPTB0001YPTB3975YPTB3976YPTB3974YPTB3970YPTB3968YPTB3971YPTB3972YPTB3966YPTB3973YPTB3969
YPES386656 YPDSF_3904YPDSF_3906YPDSF_3905YPDSF_3907YPDSF_3911YPDSF_3913YPDSF_3910YPDSF_3909YPDSF_3915YPDSF_3908YPDSF_3912
YPES377628 YPN_0001YPN_3986YPN_3987YPN_3985YPN_3981YPN_3979YPN_3982YPN_3983YPN_3977YPN_3984YPN_3980
YPES360102 YPA_0001YPA_4174YPA_4175YPA_4173YPA_4169YPA_4167YPA_4170YPA_4171YPA_4165YPA_4172YPA_4168
YPES349746 YPANGOLA_A0001YPANGOLA_A4210YPANGOLA_A4212YPANGOLA_A4209YPANGOLA_A4205YPANGOLA_A4203YPANGOLA_A4206YPANGOLA_A4207YPANGOLA_A4201YPANGOLA_A4208YPANGOLA_A4204
YPES214092 YPO0001YPO4129YPO4130YPO4128YPO4124YPO4122YPO4125YPO4126YPO4120YPO4127YPO4123
YPES187410 Y0001Y4143Y4144Y4142Y4138Y4136Y4139Y4140Y4134Y4141Y4137
YENT393305 YE0001YE4214YE4215YE4213YE4209YE4207YE4210YE4211YE4205YE4212YE4208
XORY360094 XOOORF_3752XOOORF_5176XOOORF_0225XOOORF_4684XOOORF_4682XOOORF_4685XOOORF_4686XOOORF_4680XOOORF_4687XOOORF_4683
XORY342109 XOO3199XOO4292XOO0207XOO0665XOO0667XOO0664XOO0663XOO0669XOO0662XOO0666
XORY291331 XOO3398XOO4556XOO0227XOO0729XOO0731XOO0728XOO0727XOO0733XOO0726XOO0730
XFAS405440 XFASM12_0839XFASM12_1035XFASM12_0921XFASM12_0488XFASM12_0486XFASM12_0489XFASM12_0490XFASM12_0484XFASM12_0491XFASM12_0487
XFAS183190 PD_0716PD_0862PD_0773PD_0431PD_0429PD_0432PD_0433PD_0427PD_0434PD_0430
XFAS160492 XF1499XF1935XF2106XF1146XF1144XF1147XF1148XF1142XF1149XF1145
XCAM487884 XCC-B100_1004XCC-B100_4237XCC-B100_0403XCC-B100_3797XCC-B100_3795XCC-B100_3798XCC-B100_3799XCC-B100_3793XCC-B100_3800XCC-B100_3796
XCAM316273 XCAORF_3512XCAORF_0217XCAORF_4137XCAORF_0703XCAORF_0705XCAORF_0702XCAORF_0701XCAORF_0707XCAORF_0700XCAORF_0704
XCAM314565 XC_0992XC_4130XC_0389XC_3681XC_3679XC_3682XC_3683XC_3677XC_3684XC_3680
XCAM190485 XCC3173XCC4041XCC0377XCC0551XCC0553XCC0550XCC0549XCC0555XCC0548XCC0552
XAXO190486 XAC3330XAC4165XAC0377XAC3652XAC3650XAC3653XAC3654XAC3648XAC3655XAC3651
VVUL216895 VV1_1009VV1_1011VV1_1010VV1_1018VV1_1020VV1_1017VV1_1016VV1_1022VV1_1015VV1_1019
VVUL196600 VV0001VV3261VV3262VV3258VV3254VV3252VV3255VV3256VV3250VV3257VV3253
VPAR223926 VP0001VP3079VP3080VP3076VP3072VP3070VP3073VP3074VP3068VP3075VP3071
VFIS312309 VF0001VF2574VF2575VF2571VF2567VF2565VF2568VF2569VF2563VF2570VF2566
VEIS391735 VEIS_1064VEIS_1063VEIS_0477VEIS_0479VEIS_0476VEIS_0475VEIS_0481VEIS_0474VEIS_0478
VCHO345073 VC0395_A2516VC0395_A2518VC0395_A2517VC0395_A2521VC0395_A2525VC0395_A2527VC0395_A2524VC0395_A2523VC0395_A2529VC0395_A2522VC0395_A2526
VCHO VC0002VC2774VC2775VC2771VC2767VC2765VC2768VC2769VC2763VC2770VC2766
TTUR377629 TERTU_3530TERTU_4728TERTU_4735TERTU_4719TERTU_4717TERTU_4720TERTU_4721TERTU_4715TERTU_4722TERTU_4718
TDEN292415 TBD_2807TBD_2808TBD_2800TBD_2798TBD_2801TBD_2802TBD_2796TBD_2803TBD_2799
STYP99287 STM3875STM3873STM3874STM3872STM3868STM3866STM3869STM3870STM3864STM3871STM3867
SSP94122 SHEWANA3_0003SHEWANA3_0001SHEWANA3_0002SHEWANA3_4137SHEWANA3_4133SHEWANA3_4131SHEWANA3_4134SHEWANA3_4135SHEWANA3_4129SHEWANA3_4136SHEWANA3_4132
SSON300269 SSO_3877SSO_3879SSO_3878SSO_3880SSO_3884SSO_3886SSO_3883SSO_3882SSO_3888SSO_3881SSO_3885
SSED425104 SSED_4498SSED_4496SSED_4497SSED_4493SSED_4489SSED_4487SSED_4490SSED_4491SSED_4485SSED_4492SSED_4488
SPRO399741 SPRO_4907SPRO_4909SPRO_4908SPRO_0001SPRO_0005SPRO_0007SPRO_0004SPRO_0003SPRO_0009SPRO_0002SPRO_0006
SPEA398579 SPEA_4252SPEA_4250SPEA_4251SPEA_4247SPEA_4243SPEA_4241SPEA_4244SPEA_4245SPEA_4239SPEA_4246SPEA_4242
SONE211586 SO_0001SO_4757SO_4758SO_4754SO_4750SO_4748SO_4751SO_4752SO_4746SO_4753SO_4749
SLOI323850 SHEW_3857SHEW_3855SHEW_3856SHEW_3852SHEW_3848SHEW_3846SHEW_3849SHEW_3850SHEW_3844SHEW_3851SHEW_3847
SHIGELLA MIOCGIDBGIDAATPIATPHATPGATPFATPEATPCATPBATPA
SHAL458817 SHAL_4306SHAL_4304SHAL_4305SHAL_4301SHAL_4297SHAL_4295SHAL_4298SHAL_4299SHAL_4293SHAL_4300SHAL_4296
SHAE279808 SH0414SH2674SH2675SH0929SH0931SH0928SH0933SH0926SH0930
SGLO343509 SG2404SG2406SG2405SG2407SG2411SG2413SG2410SG2409SG2415SG2408SG2412
SFLE373384 SFV_3768SFV_3766SFV_3767SFV_3765SFV_3761SFV_3759SFV_3762SFV_3763SFV_3757SFV_3764SFV_3760
SFLE198214 AAN45262.1AAN45260.1AAN45261.1AAN45259.1AAN45255.1AAN45253.1AAN45256.1AAN45257.1AAN45251.1AAN45258.1AAN45254.1
SENT454169 SEHA_C4208SEHA_C4206SEHA_C4207SEHA_C4203SEHA_C4199SEHA_C4197SEHA_C4200SEHA_C4201SEHA_C4195SEHA_C4202SEHA_C4198
SENT321314 SCH_3788SCH_3786SCH_3787SCH_3784SCH_3780SCH_3778SCH_3781SCH_3782SCH_3776SCH_3783SCH_3779
SENT295319 SPA3714SPA3712SPA3713SPA3711SPA3707SPA3705SPA3708SPA3709SPA3703SPA3710SPA3706
SENT220341 STY3903STY3905STY3904STY3906STY3910STY3912STY3909STY3908STY3914STY3907STY3911
SENT209261 T3644T3646T3645T3647T3651T3653T3650T3649T3655T3648T3652
SDYS300267 SDY_4006SDY_4008SDY_4007SDY_4009SDY_4013SDY_4015SDY_4012SDY_4011SDY_4017SDY_4010SDY_4014
SDEN318161 SDEN_3764SDEN_3762SDEN_3763SDEN_3755SDEN_3753SDEN_3756SDEN_3757SDEN_3751SDEN_3758SDEN_3754
SDEG203122 SDE_1473SDE_4011SDE_4012SDE_3969SDE_3967SDE_3970SDE_3971SDE_3965SDE_3972SDE_3968
SBOY300268 SBO_3745SBO_3747SBO_3746SBO_3748SBO_3752SBO_3754SBO_3751SBO_3750SBO_3756SBO_3753
SBAL402882 SHEW185_4377SHEW185_4375SHEW185_4376SHEW185_4372SHEW185_4368SHEW185_4366SHEW185_4369SHEW185_4370SHEW185_4364SHEW185_4371SHEW185_4367
SBAL399599 SBAL195_4519SBAL195_4517SBAL195_4518SBAL195_4514SBAL195_4510SBAL195_4508SBAL195_4511SBAL195_4512SBAL195_4506SBAL195_4513SBAL195_4509
SAUR93062 SACOL2639SACOL2736SACOL2737SACOL2098SACOL2096SACOL2099SACOL2094SACOL2101SACOL2097
SAUR93061 SAOUHSC_02947SAOUHSC_03051SAOUHSC_03052SAOUHSC_02346SAOUHSC_02343SAOUHSC_02347SAOUHSC_02340SAOUHSC_02350SAOUHSC_02345
SAUR426430 NWMN_2518NWMN_2610NWMN_2611NWMN_2010NWMN_2008NWMN_2011NWMN_2006NWMN_2013NWMN_2009
SAUR418127 SAHV_2604SAHV_2694SAHV_2695SAHV_2090SAHV_2088SAHV_2091SAHV_2086SAHV_2093SAHV_2089
SAUR367830 SAUSA300_2554SAUSA300_2644SAUSA300_2645SAUSA300_2061SAUSA300_2059SAUSA300_2062SAUSA300_2057SAUSA300_2064SAUSA300_2060
SAUR359787 SAURJH1_2698SAURJH1_2789SAURJH1_2790SAURJH1_2180SAURJH1_2178SAURJH1_2181SAURJH1_2176SAURJH1_2183SAURJH1_2179
SAUR359786 SAURJH9_2643SAURJH9_2732SAURJH9_2733SAURJH9_2142SAURJH9_2140SAURJH9_2143SAURJH9_2138SAURJH9_2145SAURJH9_2141
SAUR282459 SAS2506SAS2592SAS2593SAS2009SAS2007SAS2010SAS2005SAS2012SAS2008
SAUR282458 SAR2698SAR2796SAR2797SAR2194SAR2192SAR2195SAR2190SAR2197SAR2193
SAUR273036 SAB2494CSAB2586CSAB2587CSAB1990CSAB1988CSAB1991CSAB1986CSAB1993CSAB1989C
SAUR196620 MW2540MW2628MW2629MW2030MW2028MW2031MW2026MW2033MW2029
SAUR158879 SA2413SA2499SA2500SA1908SA1906SA1909SA1904SA1911SA1907
SAUR158878 SAV2620SAV2710SAV2711SAV2106SAV2104SAV2107SAV2102SAV2109SAV2105
RFER338969 RFER_0050RFER_0049RFER_0109RFER_0107RFER_0110RFER_0111RFER_0105RFER_0112RFER_0108
PSYR223283 PSPTO_1186PSPTO_5609PSPTO_5610PSPTO_5602PSPTO_5600PSPTO_5603PSPTO_5604PSPTO_5598PSPTO_5605PSPTO_5601
PSYR205918 PSYR_1024PSYR_5131PSYR_5132PSYR_5124PSYR_5122PSYR_5125PSYR_5126PSYR_5120PSYR_5127PSYR_5123
PSTU379731 PST_1138PST_4201PST_4202PST_4194PST_4192PST_4195PST_4196PST_4190PST_4197PST_4193
PSP56811 PSYCPRWF_1398PSYCPRWF_1781PSYCPRWF_0190PSYCPRWF_0192PSYCPRWF_0189PSYCPRWF_0188PSYCPRWF_0194PSYCPRWF_0187PSYCPRWF_0191
PSP296591 BPRO_2982BPRO_0074BPRO_0073BPRO_0324BPRO_0326BPRO_0323BPRO_0322BPRO_0328BPRO_0321BPRO_0325
PPUT76869 PPUTGB1_4612PPUTGB1_5441PPUTGB1_5442PPUTGB1_5434PPUTGB1_5432PPUTGB1_5435PPUTGB1_5436PPUTGB1_5430PPUTGB1_5437PPUTGB1_5433
PPUT351746 PPUT_4488PPUT_5305PPUT_5306PPUT_5298PPUT_5296PPUT_5299PPUT_5300PPUT_5294PPUT_5301PPUT_5297
PPUT160488 PP_4628PP_0003PP_0004PP_5416PP_5414PP_5417PP_5418PP_5412PP_5419PP_5415
PPRO298386 PBPRA0001PBPRA3614PBPRA3615PBPRA3607PBPRA3605PBPRA3608PBPRB0131PBPRA3603PBPRA3610PBPRB0134
PNAP365044 PNAP_1908PNAP_0064PNAP_0063PNAP_0252PNAP_0254PNAP_0251PNAP_0250PNAP_0256PNAP_0249PNAP_0253
PMUL272843 PM1484PM1486PM1485PM1491PM1493PM1490PM1489PM1495PM1488PM1492
PMEN399739 PMEN_3283PMEN_4617PMEN_4618PMEN_4610PMEN_4608PMEN_4611PMEN_4612PMEN_4606PMEN_4613PMEN_4609
PLUM243265 PLU0050PLU0048PLU0049PLU0047PLU0043PLU0041PLU0044PLU0045PLU0039PLU0046PLU0042
PING357804 PING_3742PING_3740PING_3741PING_3733PING_3731PING_3734PING_3735PING_3729PING_3736PING_3732
PHAL326442 PSHAA3020PSHAA3018PSHAA3019PSHAA3011PSHAA3009PSHAA3012PSHAA3013PSHAA3007PSHAA3014PSHAA3010
PFLU220664 PFL_0955PFL_6225PFL_6226PFL_6219PFL_6217PFL_6220PFL_6221PFL_6215PFL_6222PFL_6218
PFLU216595 PFLU5152PFLU6128PFLU6129PFLU6121PFLU6119PFLU6122PFLU6123PFLU6117PFLU6124PFLU6120
PFLU205922 PFL_0897PFL_5740PFL_5741PFL_5733PFL_5731PFL_5734PFL_5735PFL_5729PFL_5736PFL_5732
PENT384676 PSEEN4620PSEEN5553PSEEN5554PSEEN5545PSEEN5543PSEEN5546PSEEN5547PSEEN5541PSEEN5549PSEEN5544
PCRY335284 PCRYO_1057PCRYO_1152PCRYO_2330PCRYO_2328PCRYO_2331PCRYO_2332PCRYO_2326PCRYO_2333PCRYO_2329
PATL342610 PATL_4309PATL_4305PATL_4306PATL_4298PATL_4296PATL_4299PATL_4300PATL_4294PATL_4301PATL_4297
PARC259536 PSYC_1321PSYC_1240PSYC_2027PSYC_2025PSYC_2028PSYC_2029PSYC_2023PSYC_2030PSYC_2026
PAER208964 PA3435PA5564PA5565PA5557PA5555PA5558PA5559PA5553PA5560PA5556
PAER208963 PA14_19660PA14_73360PA14_73370PA14_73280PA14_73250PA14_73290PA14_73300PA14_73230PA14_73310PA14_73260
OIHE221109 OB1653OB3489OB3490OB2978OB2976OB2979OB2974OB2981OB2977
NOCE323261 NOC_1305NOC_3084NOC_3085NOC_3077NOC_3075NOC_3078NOC_3079NOC_3073NOC_3080NOC_3076
NMUL323848 NMUL_A2769NMUL_A2770NMUL_A0307NMUL_A0309NMUL_A0306NMUL_A0305NMUL_A0311NMUL_A0304NMUL_A0308
NMEN374833 NMCC_1070NMCC_1961NMCC_1957NMCC_0281NMCC_0283NMCC_0280NMCC_0285NMCC_0278NMCC_0282
NMEN272831 NMC1092NMC0181NMC0184NMC1909NMC1907NMC1910NMC1905NMC1912NMC1908
NMEN122587 NMA1363NMA0077NMA0074NMA0516NMA0518NMA0515NMA0520NMA0513NMA0517
NMEN122586 NMB_1190NMB_0190NMB_0193NMB_1937NMB_1935NMB_1938NMB_1933NMB_1940NMB_1936
NEUT335283 NEUT_1185NEUT_2436NEUT_2437NEUT_0274NEUT_0276NEUT_0273NEUT_0272NEUT_0278NEUT_0271NEUT_0275
NEUR228410 NE0853NE2475NE2476NE0203NE0205NE0202NE0201NE0207NE0200NE0204
MSUC221988 MS2250MS2353MS2354MS2349MS2347MS2350MS2351MS2345MS2352MS2348
MSP400668 MMWYL1_4472MMWYL1_4473MMWYL1_4465MMWYL1_4463MMWYL1_4466MMWYL1_4467MMWYL1_4461MMWYL1_4468MMWYL1_4464
MPET420662 MPE_A3726MPE_A3786MPE_A3787MPE_A0194MPE_A0196MPE_A0193MPE_A0192MPE_A0198MPE_A0191MPE_A0195
MFLA265072 MFLA_2733MFLA_2754MFLA_2755MFLA_2747MFLA_2745MFLA_2748MFLA_2749MFLA_2743MFLA_2750MFLA_2746
MCAP243233 MCA_0002MCA_0001MCA_0009MCA_0011MCA_0008MCA_0007MCA_0013MCA_0006MCA_0010
MAQU351348 MAQU_3588MAQU_3885MAQU_3886MAQU_3878MAQU_3876MAQU_3879MAQU_3880MAQU_3874MAQU_3881MAQU_3877
LWEL386043 LWE1730LWE2739LWE2745LWE2480LWE2478LWE2481LWE2476LWE2483LWE2479
LPNE400673 LPC_3176LPC_3175LPC_3300LPC_3298LPC_3301LPC_3302LPC_3296LPC_3303LPC_3299
LPNE297246 LPP2949LPP2948LPP3056LPP3054LPP3057LPP3058LPP3052LPP3059LPP3055
LPNE297245 LPL2803LPL2802LPL2913LPL2911LPL2914LPL2915LPL2909LPL2916LPL2912
LPNE272624 LPG2890LPG2889LPG2985LPG2983LPG2986LPG2987LPG2981LPG2988LPG2984
LMON265669 LMOF2365_1734LMOF2365_2790LMOF2365_2801LMOF2365_2505LMOF2365_2503LMOF2365_2506LMOF2365_2501LMOF2365_2508LMOF2365_2504
LMON169963 LMO1710LMO2802LMO2810LMO2532LMO2530LMO2533LMO2528LMO2535LMO2531
LINN272626 LIN1822LIN2934LIN2942LIN2676LIN2674LIN2677LIN2672LIN2679LIN2675
LCHO395495 LCHO_4197LCHO_4196LCHO_3529LCHO_3527LCHO_3530LCHO_3531LCHO_3525LCHO_3532LCHO_3528
KPNE272620 GKPORF_B3489GKPORF_B3487GKPORF_B3488GKPORF_B3486GKPORF_B3482GKPORF_B3480GKPORF_B3483GKPORF_B3484GKPORF_B3478GKPORF_B3485GKPORF_B3481
JSP375286 MMA_3617MMA_3638MMA_3639MMA_3630MMA_3628MMA_3631MMA_3632MMA_3626MMA_3633MMA_3629
ILOI283942 IL2631IL2629IL2630IL2622IL2620IL2623IL2624IL2618IL2625IL2621
HSOM228400 HSM_1859HSM_1857HSM_1858HSM_1853HSM_1851HSM_1854HSM_1855HSM_1849HSM_1856HSM_1852
HSOM205914 HS_1706HS_1704HS_1705HS_1699HS_1697HS_1700HS_1701HS_1695HS_1702HS_1698
HINF71421 HI_0669HI_0486HI_0582HI_0482HI_0480HI_0483HI_0484HI_0478HI_0485HI_0481
HINF374930 CGSHIEE_08830CGSHIEE_00550CGSHIEE_00050CGSHIEE_00575CGSHIEE_00585CGSHIEE_00570CGSHIEE_00565CGSHIEE_00595CGSHIEE_00560CGSHIEE_00580
HINF281310 NTHI0791NTHI0617NTHI0744NTHI0612NTHI0610NTHI0613NTHI0614NTHI0608NTHI0615NTHI0611
HHAL349124 HHAL_0187HHAL_0001HHAL_0002HHAL_2433HHAL_2431HHAL_2434HHAL_2435HHAL_2429HHAL_2436HHAL_2432
HDUC233412 HD_1996HD_0002HD_0001HD_0007HD_0009HD_0006HD_0005HD_0011HD_0004HD_0008
HCHE349521 HCH_00784HCH_07082HCH_07083HCH_07075HCH_07072HCH_07076HCH_07077HCH_07070HCH_07078HCH_07073
HARS204773 HEAR3398HEAR3417HEAR3418HEAR3408HEAR3406HEAR3409HEAR3410HEAR3404HEAR3411HEAR3407
GTHE420246 GTNG_1269GTNG_3438GTNG_3439GTNG_3307GTNG_3305GTNG_3308GTNG_3303GTNG_3310GTNG_3306
GKAU235909 GK1409GK3492GK3493GK3361GK3359GK3362GK3357GK3364GK3360
ESP42895 ENT638_4122ENT638_4124ENT638_4123ENT638_4125ENT638_4129ENT638_4131ENT638_4128ENT638_4127ENT638_4133ENT638_4126ENT638_4130
EFER585054 EFER_4041EFER_4039EFER_4040EFER_4038EFER_4034EFER_4032EFER_4035EFER_4036EFER_4030EFER_4037EFER_4033
ECOO157 MIOCGIDBGIDAATPIATPHATPGATPFATPEATPCATPBATPA
ECOL83334 ECS4684ECS4682ECS4683ECS4681ECS4677ECS4675ECS4678ECS4679ECS4673ECS4680ECS4676
ECOL585397 ECED1_4432ECED1_4430ECED1_4431ECED1_4429ECED1_4425ECED1_4423ECED1_4426ECED1_4427ECED1_4421ECED1_4428ECED1_4424
ECOL585057 ECIAI39_4346ECIAI39_4344ECIAI39_4345ECIAI39_4343ECIAI39_4339ECIAI39_4337ECIAI39_4340ECIAI39_4341ECIAI39_4335ECIAI39_4342ECIAI39_4338
ECOL585056 ECUMN_4272ECUMN_4270ECUMN_4271ECUMN_4269ECUMN_4265ECUMN_4263ECUMN_4266ECUMN_4267ECUMN_4261ECUMN_4268ECUMN_4264
ECOL585055 EC55989_4217EC55989_4215EC55989_4216EC55989_4214EC55989_4210EC55989_4208EC55989_4211EC55989_4212EC55989_4206EC55989_4213EC55989_4209
ECOL585035 ECS88_4164ECS88_4162ECS88_4163ECS88_4161ECS88_4157ECS88_4155ECS88_4158ECS88_4159ECS88_4153ECS88_4160ECS88_4156
ECOL585034 ECIAI1_3926ECIAI1_3924ECIAI1_3925ECIAI1_3923ECIAI1_3919ECIAI1_3917ECIAI1_3920ECIAI1_3921ECIAI1_3915ECIAI1_3922ECIAI1_3918
ECOL481805 ECOLC_4252ECOLC_4254ECOLC_4253ECOLC_4255ECOLC_4259ECOLC_4261ECOLC_4258ECOLC_4257ECOLC_4263ECOLC_4256ECOLC_4260
ECOL469008 ECBD_4290ECBD_4292ECBD_4291ECBD_4293ECBD_4297ECBD_4299ECBD_4296ECBD_4295ECBD_4301ECBD_4294ECBD_4298
ECOL439855 ECSMS35_4110ECSMS35_4108ECSMS35_4109ECSMS35_4107ECSMS35_4103ECSMS35_4101ECSMS35_4104ECSMS35_4105ECSMS35_4099ECSMS35_4106ECSMS35_4102
ECOL413997 ECB_03626ECB_03625ECB_03623ECB_03619ECB_03617ECB_03620ECB_03621ECB_03615ECB_03622ECB_03618
ECOL409438 ECSE_4032ECSE_4030ECSE_4031ECSE_4029ECSE_4025ECSE_4023ECSE_4026ECSE_4027ECSE_4021ECSE_4028ECSE_4024
ECOL364106 UTI89_C4297UTI89_C4295UTI89_C4296UTI89_C4294UTI89_C4289UTI89_C4286UTI89_C4291UTI89_C4292UTI89_C4284UTI89_C4293UTI89_C4287
ECOL362663 ECP_3941ECP_3939ECP_3940ECP_3938ECP_3934ECP_3932ECP_3935ECP_3936ECP_3930ECP_3937ECP_3933
ECOL331111 ECE24377A_4258ECE24377A_4257ECE24377A_4255ECE24377A_4251ECE24377A_4249ECE24377A_4252ECE24377A_4253ECE24377A_4246ECE24377A_4254ECE24377A_4250
ECOL316407 ECK3736:JW3720:B3742ECK3733:JW3718:B3740ECK3734:JW3719:B3741ECK3732:JW5611:B3739ECK3728:JW3713:B3735ECK3726:JW3711:B3733ECK3729:JW3714:B3736ECK3730:JW3715:B3737ECK3724:JW3709:B3731ECK3731:JW3716:B3738ECK3727:JW3712:B3734
ECOL199310 C4670C4668C4669C4667C4662C4659C4664C4665C4657C4666C4660
ECAR218491 ECA0001ECA4520ECA4521ECA4519ECA4515ECA4513ECA4516ECA4517ECA4511ECA4518ECA4514
DNOD246195 DNO_1150DNO_0672DNO_1145DNO_1143DNO_1146DNO_1147DNO_1141DNO_1148DNO_1144
DARO159087 DARO_4104DARO_4103DARO_4111DARO_4113DARO_4110DARO_4109DARO_4115DARO_4108DARO_4112
CVIO243365 CV_0662CV_0661CV_0669CV_0671CV_0668CV_0667CV_0673CV_0666CV_0670
CSAL290398 CSAL_1806CSAL_3294CSAL_3295CSAL_3287CSAL_3285CSAL_3288CSAL_3289CSAL_3283CSAL_3290CSAL_3286
CRUT413404 RMAG_0069RMAG_0068RMAG_1048RMAG_1046RMAG_1049RMAG_1050RMAG_1044RMAG_1051RMAG_1047
CPSY167879 CPS_5048CPS_5046CPS_5047CPS_0059CPS_0061CPS_0058CPS_0057CPS_0063CPS_0056CPS_0060
CJAP155077 CJA_2403CJA_3819CJA_3820CJA_3812CJA_3810CJA_3813CJA_3814CJA_3808CJA_3815CJA_3811
CBUR434922 COXBU7E912_0197COXBU7E912_0198COXBU7E912_0179COXBU7E912_0177COXBU7E912_0180COXBU7E912_0181COXBU7E912_0174COXBU7E912_0182COXBU7E912_0178
CBUR360115 COXBURSA331_A2126COXBURSA331_A2125COXBURSA331_A2145COXBURSA331_A2147COXBURSA331_A2144COXBURSA331_A2143COXBURSA331_A2150COXBURSA331_A2142COXBURSA331_A2146
CBUR227377 CBU_1925CBU_1924CBU_1942CBU_1944CBU_1941CBU_1940CBU_1946CBU_1939CBU_1943
BWEI315730 BCERKBAB4_3244BCERKBAB4_5275BCERKBAB4_5276BCERKBAB4_5106BCERKBAB4_5104BCERKBAB4_5107BCERKBAB4_5102BCERKBAB4_5109BCERKBAB4_5105
BVIE269482 BCEP1808_5043BCEP1808_0103BCEP1808_0102BCEP1808_0112BCEP1808_0114BCEP1808_0111BCEP1808_0110BCEP1808_0116BCEP1808_0109BCEP1808_0113
BTHU412694 BALH_3182BALH_4989BALH_4990BALH_4811BALH_4809BALH_4812BALH_4807BALH_4814BALH_4810
BTHU281309 BT9727_3300BT9727_5163BT9727_5164BT9727_4991BT9727_4988BT9727_4992BT9727_4986BT9727_4994BT9727_4990
BTHA271848 BTH_II1172BTH_I3319BTH_I3320BTH_I3311BTH_I3309BTH_I3312BTH_I3313BTH_I3307BTH_I3314BTH_I3310
BSUB BSU33440BSU41000BSU41010BSU36840BSU36820BSU36850BSU36800BSU36870BSU36830
BSP36773 BCEP18194_B1346BCEP18194_A3276BCEP18194_A3275BCEP18194_A3285BCEP18194_A3287BCEP18194_A3284BCEP18194_A3283BCEP18194_A3289BCEP18194_A3282BCEP18194_A3286
BPUM315750 BPUM_1777BPUM_3731BPUM_3732BPUM_3329BPUM_3327BPUM_3330BPUM_3325BPUM_3332BPUM_3328
BPSE320373 BURPS668_A1752BURPS668_3981BURPS668_3982BURPS668_3971BURPS668_3969BURPS668_3972BURPS668_3973BURPS668_3967BURPS668_3974BURPS668_3970
BPSE320372 BURPS1710B_B0286BURPS1710B_A0195BURPS1710B_A0196BURPS1710B_A0186BURPS1710B_A0184BURPS1710B_A0187BURPS1710B_A0188BURPS1710B_A0182BURPS1710B_A0189BURPS1710B_A0185
BPSE272560 BPSS1241BPSL3407BPSL3408BPSL3399BPSL3397BPSL3400BPSL3401BPSL3395BPSL3402BPSL3398
BPET94624 BPET3048BPET4976BPET4977BPET0339BPET0341BPET0338BPET0337BPET0343BPET0336BPET0340
BPER257313 BP1209BP0002BP0001BP3285BP3287BP3284BP3283BP3289BP3282BP3286
BPAR257311 BPP1823BPP0002BPP0001BPP4138BPP4136BPP4139BPP4140BPP4134BPP4141BPP4137
BMAL320389 BMA10247_A1247BMA10247_3004BMA10247_3003BMA10247_3012BMA10247_3014BMA10247_3011BMA10247_3010BMA10247_3016BMA10247_3009BMA10247_3013
BMAL320388 BMASAVP1_0080BMASAVP1_A3366BMASAVP1_A3367BMASAVP1_A3358BMASAVP1_A3356BMASAVP1_A3359BMASAVP1_A3360BMASAVP1_A3354BMASAVP1_A3361BMASAVP1_A3357
BMAL243160 BMA_A1084BMA_2945BMA_2944BMA_2954BMA_2956BMA_2953BMA_2952BMA_2958BMA_2951BMA_2955
BLIC279010 BL01949BL00108BL00109BL03997BL03999BL03996BL04001BL03994BL03998
BHAL272558 BH0609BH4060BH4061BH3757BH3755BH3758BH3753BH3760BH3756
BCLA66692 ABC0618ABC4115ABC4116ABC3854ABC3852ABC3855ABC3850ABC3857ABC3853
BCER572264 BCA_3615BCA_5637BCA_5638BCA_5453BCA_5451BCA_5454BCA_5449BCA_5456BCA_5452
BCER405917 BCE_3555BCE_5633BCE_5634BCE_5433BCE_5431BCE_5434BCE_5429BCE_5436BCE_5432
BCEN331272 BCEN2424_4504BCEN2424_0094BCEN2424_0093BCEN2424_0103BCEN2424_0105BCEN2424_0102BCEN2424_0101BCEN2424_0107BCEN2424_0100BCEN2424_0104
BCEN331271 BCEN_3865BCEN_2961BCEN_2962BCEN_2952BCEN_2950BCEN_2953BCEN_2954BCEN_2948BCEN_2955BCEN_2951
BBRO257310 BB3283BB0002BB0001BB4608BB4606BB4609BB4610BB4604BB4611BB4607
BANT592021 BAA_3625BAA_5766BAA_5767BAA_5578BAA_5576BAA_5579BAA_5574BAA_5581BAA_5577
BANT568206 BAMEG_1036BAMEG_5783BAMEG_5784BAMEG_5597BAMEG_5595BAMEG_5598BAMEG_5593BAMEG_5600BAMEG_5596
BANT261594 GBAA3596GBAA5732GBAA5733GBAA5550GBAA5548GBAA5551GBAA5546GBAA5553GBAA5549
BANT260799 BAS3335BAS5335BAS5336BAS5158BAS5156BAS5159BAS5154BAS5161BAS5157
BAMY326423 RBAM_030610RBAM_038100RBAM_038110RBAM_034000RBAM_033980RBAM_034010RBAM_033960RBAM_034030RBAM_033990
BAMB398577 BAMMC406_4398BAMMC406_0095BAMMC406_0094BAMMC406_0103BAMMC406_0105BAMMC406_0102BAMMC406_0101BAMMC406_0107BAMMC406_0100BAMMC406_0104
BAMB339670 BAMB_3934BAMB_0085BAMB_0084BAMB_0094BAMB_0096BAMB_0093BAMB_0092BAMB_0098BAMB_0091BAMB_0095
ASP76114 EBA2913EBA2915EBA3003EBA3006EBA3002EBA3000EBA3008EBA2999EBA3004
ASP62977 ACIAD2368ACIAD2440ACIAD0184ACIAD0186ACIAD0183ACIAD0182ACIAD0188ACIAD0180ACIAD0185
ASP62928 AZO0142AZO0141AZO0156AZO0158AZO0155AZO0154AZO0160AZO0153AZO0157
ASP232721 AJS_0027AJS_0026AJS_0305AJS_0307AJS_0304AJS_0303AJS_0309AJS_0302AJS_0306
ASAL382245 ASA_4362ASA_4360ASA_4361ASA_4353ASA_4351ASA_4354ASA_4355ASA_4349ASA_4356ASA_4352
APLE434271 APJL_1591APJL_1687APJL_1688APJL_1682APJL_1680APJL_1683APJL_1684APJL_1678APJL_1685APJL_1681
APLE416269 APL_1563APL_1654APL_1655APL_1649APL_1647APL_1650APL_1651APL_1645APL_1652APL_1648
AHYD196024 AHA_4274AHA_4272AHA_4273AHA_4265AHA_4263AHA_4266AHA_4267AHA_4261AHA_4268AHA_4264
AEHR187272 MLG_1892MLG_2879MLG_2880MLG_2872MLG_2870MLG_2873MLG_2874MLG_2868MLG_2875MLG_2871
ABOR393595 ABO_2124ABO_2736ABO_2737ABO_2729ABO_2727ABO_2730ABO_2731ABO_2725ABO_2732ABO_2728
ABAU360910 BAV0002BAV0001BAV3217BAV3215BAV3218BAV3219BAV3213BAV3220BAV3216
AAVE397945 AAVE_4788AAVE_0052AAVE_0051AAVE_0369AAVE_0371AAVE_0368AAVE_0367AAVE_0373AAVE_0366AAVE_0370


Organism features enriched in list (features available for 195 out of the 205 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00570702192
Arrangment:Clusters 0.00025351317
Arrangment:Pairs 3.920e-658112
Disease:Bubonic_plague 0.001329566
Disease:Dysentery 0.001329566
Disease:Gastroenteritis 0.00132671013
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.0011607911
Endospores:No 3.730e-744211
GC_Content_Range4:0-40 1.005e-939213
GC_Content_Range4:40-60 4.722e-9107224
GC_Content_Range7:30-40 0.000391239166
GC_Content_Range7:40-50 0.005377750117
GC_Content_Range7:50-60 1.450e-657107
Genome_Size_Range5:0-2 3.128e-246155
Genome_Size_Range5:4-6 7.768e-19109184
Genome_Size_Range9:1-2 3.414e-186128
Genome_Size_Range9:4-5 2.487e-65296
Genome_Size_Range9:5-6 4.629e-115788
Gram_Stain:Gram_Neg 6.707e-12149333
Gram_Stain:Gram_Pos 0.000351934150
Habitat:Specialized 0.0000911653
Motility:No 4.548e-629151
Motility:Yes 1.507e-9123267
Optimal_temp.:30-37 0.00001311518
Optimal_temp.:35-37 0.00001371213
Optimal_temp.:37 0.005088825106
Oxygen_Req:Anaerobic 5.513e-145102
Oxygen_Req:Facultative 6.437e-14108201
Pathogenic_in:Animal 0.00009513666
Pathogenic_in:Human 0.000719988213
Pathogenic_in:No 8.193e-847226
Pathogenic_in:Plant 0.00635011015
Shape:Coccobacillus 0.0071875811
Shape:Rod 9.126e-12153347
Shape:Spiral 0.0000109134
Temp._range:Mesophilic 0.0006168172473
Temp._range:Psychrophilic 0.000863289
Temp._range:Thermophilic 0.0004026335



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ORGANISMS CONTAINING AT MOST 2 GENES FROM THE GROUP:

Total number of orgs: 122
Effective number of orgs (counting one per cluster within 468 clusters): 110

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TSP1755 Thermoanaerobacter sp.2
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332232
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX2
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSOL273057 ncbi Sulfolobus solfataricus P20
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington1
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332092
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
RFEL315456 ncbi Rickettsia felis URRWXCal22
RCON272944 ncbi Rickettsia conorii Malish 72
RBEL336407 ncbi Rickettsia bellii RML369-C2
PTOR263820 ncbi Picrophilus torridus DSM 97900
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma1
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712022
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-21
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG12
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273432
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566012
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
GBET391165 ncbi Granulibacter bethesdensis CGDNIH12
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S851
FMAG334413 ncbi Finegoldia magna ATCC 293282
FALN326424 ncbi Frankia alni ACN14a2
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas2
ECAN269484 ncbi Ehrlichia canis Jake2
DRAD243230 ncbi Deinococcus radiodurans R11
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CTET212717 ncbi Clostridium tetani E882
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS1
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1351
BLON206672 ncbi Bifidobacterium longum NCC27052
BHER314723 ncbi Borrelia hermsii DAH1
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B310
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB1
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG12
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040


Names of the homologs of the genes in the group in each of these orgs
  EG11199   EG10376   EG10375   EG10106   EG10105   EG10104   EG10103   EG10102   EG10100   EG10099   EG10098   
WPIP955 WD_0656
WPIP80849 WB_0485
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA1971
TTHE262724 TT_C1606
TSP1755 TETH514_2407TETH514_2408
TPSE340099 TETH39_2288TETH39_2289
TPEN368408
TPAL243276
TKOD69014
TFUS269800 TFU_3112TFU_2411
TDEN243275
TACI273075
STOK273063
SSOL273057
SMAR399550
SACI330779
RTYP257363 RT0790
RSAL288705 RSAL33209_1444RSAL33209_1449
RPRO272947 RP803
RFEL315456 RF_0119RF_1268
RCON272944 RC0084RC1237
RBEL336407 RBE_0092RBE_0097
PTOR263820
PISL384616
PHOR70601
PGIN242619 PG_1307
PFUR186497
PAST100379 PAM267
PARS340102
PAER178306
PACN267747 PPA2344PPA1243
PABY272844
OTSU357244
NSEN222891 NSE_0396
NPHA348780
MTHE349307
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633 MYPE580
MMYC272632 MSC_0912MSC_0889
MMOB267748 MMOB5670
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311 MFL662
MCAP340047 MCAP_0807MCAP_0080
MBUR259564
MBAR269797
MART243272
MAEO419665
MACE188937 MA2699
LINT189518 LA4358LA2775
IHOS453591
HWAL362976
HSP64091
HSAL478009
HMUK485914
HMAR272569
HBUT415426
GBET391165 GBCGDNIH1_2055GBCGDNIH1_2058
FSUC59374 FSU1571
FMAG334413 FMG_1622FMG_1623
FALN326424 FRAAL5324FRAAL5935
ERUM302409 ERGA_CDS_08780
ERUM254945 ERWE_CDS_08870
ECHA205920 ECH_0131ECH_1086
ECAN269484 ECAJ_0653ECAJ_0872
DRAD243230 DR_0014
DGEO319795 DGEO_2335
CTRA471473 CTLON_0755
CTRA471472 CTL0760
CTET212717 CTC_00100CTC_00099
CSUL444179 SMGWSS_035
CPNE182082 CPB0643
CPNE138677 CPJ0617
CPNE115713 CPN0617
CPNE115711 CP_0130
CMUR243161 TC_0785
CMET456442
CMAQ397948
CKOR374847
CFEL264202 CF0883
CCAV227941 CCA_00123
CABO218497 CAB122
BXEN266265
BTUR314724 BT0177
BLON206672 BL0361BL0363
BHER314723 BH0177
BGAR290434
BBUR224326
BAPH372461 BCC_001
BAFZ390236
AYEL322098 AYWB_454
AURANTIMONAS
APHA212042
APER272557
ANAE240017 ANA_2212ANA_0167
AMAR234826
ALAI441768 ACL_0064
AFUL224325


Organism features enriched in list (features available for 114 out of the 122 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0000305592
Arrangment:Pairs 0.001173211112
Disease:Pharyngitis 1.745e-688
Disease:bronchitis_and_pneumonitis 1.745e-688
Endospores:No 2.457e-867211
Endospores:Yes 0.0005394253
GC_Content_Range4:0-40 0.001424055213
GC_Content_Range4:60-100 0.000363115145
GC_Content_Range7:0-30 1.437e-92747
GC_Content_Range7:60-70 0.000732014134
Genome_Size_Range5:0-2 1.322e-2173155
Genome_Size_Range5:4-6 5.605e-155184
Genome_Size_Range5:6-10 0.0017400247
Genome_Size_Range9:0-1 1.435e-122227
Genome_Size_Range9:1-2 4.992e-1051128
Genome_Size_Range9:4-5 2.586e-6496
Genome_Size_Range9:5-6 2.096e-8188
Genome_Size_Range9:6-8 0.0018906138
Gram_Stain:Gram_Neg 1.770e-643333
Gram_Stain:Gram_Pos 6.504e-612150
Habitat:Host-associated 0.000281856206
Habitat:Multiple 1.517e-109178
Habitat:Specialized 0.00006612253
Motility:Yes 0.003117940267
Optimal_temp.:- 0.005033739257
Optimal_temp.:100 0.007318733
Optimal_temp.:35-40 0.007318733
Optimal_temp.:37 0.005262630106
Optimal_temp.:85 0.001400644
Oxygen_Req:Aerobic 0.006348026185
Oxygen_Req:Anaerobic 1.668e-740102
Oxygen_Req:Facultative 0.000016221201
Pathogenic_in:Ruminant 0.007318733
Salinity:Extreme_halophilic 0.003677757
Shape:Irregular_coccus 9.915e-101517
Shape:Pleomorphic 0.000927968
Shape:Rod 2.939e-1235347
Shape:Sphere 1.021e-91619
Temp._range:Hyperthermophilic 1.047e-81723
Temp._range:Mesophilic 5.945e-773473
Temp._range:Thermophilic 0.00224921435



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 9
Effective number of orgs (counting one per cluster within 468 clusters): 7

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00133187559
XFAS405440 ncbi Xylella fastidiosa M12 0.0040244117710
XFAS183190 ncbi Xylella fastidiosa Temecula1 0.0044434118910
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum) 0.00472926218
XFAS160492 ncbi Xylella fastidiosa 9a5c 0.0055317121610
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum) 0.00588906398
CBLO203907 ncbi Candidatus Blochmannia floridanus 0.00720166568
BCIC186490 Candidatus Baumannia cicadellinicola 0.00895976758
DNOD246195 ncbi Dichelobacter nodosus VCS1703A 0.00970769499


Names of the homologs of the genes in the group in each of these orgs
  EG11199   EG10376   EG10375   EG10106   EG10105   EG10104   EG10103   EG10102   EG10100   EG10099   EG10098   
CRUT413404 RMAG_0069RMAG_0068RMAG_1048RMAG_1046RMAG_1049RMAG_1050RMAG_1044RMAG_1051RMAG_1047
XFAS405440 XFASM12_0839XFASM12_1035XFASM12_0921XFASM12_0488XFASM12_0486XFASM12_0489XFASM12_0490XFASM12_0484XFASM12_0491XFASM12_0487
XFAS183190 PD_0716PD_0862PD_0773PD_0431PD_0429PD_0432PD_0433PD_0427PD_0434PD_0430
BAPH198804 BUSG001BUSG005BUSG007BUSG004BUSG003BUSG009BUSG002BUSG006
XFAS160492 XF1499XF1935XF2106XF1146XF1144XF1147XF1148XF1142XF1149XF1145
BSP107806 BU001BU005BU007BU004BU003BU009BU002BU006
CBLO203907 BFL001BFL005BFL007BFL004BFL003BFL009BFL002BFL006
BCIC186490 BCI_0148BCI_0144BCI_0142BCI_0145BCI_0146BCI_0140BCI_0147BCI_0143
DNOD246195 DNO_1150DNO_0672DNO_1145DNO_1143DNO_1146DNO_1147DNO_1141DNO_1148DNO_1144


Organism features enriched in list (features available for 8 out of the 9 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Citrus_variegated_chlorosis 0.000165022
Genome_Size_Range9:0-1 0.0040328327
Optimal_temp.:26-28 0.000165022



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
AST-PWY (arginine degradation II (AST pathway))1201010.5329
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181460.5319
PWY-5386 (methylglyoxal degradation I)3051720.4896
PWY-5918 (heme biosynthesis I)2721590.4787
GLYCOCAT-PWY (glycogen degradation I)2461490.4756
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861630.4723
GLUCONSUPER-PWY (D-gluconate degradation)2291400.4580
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951260.4555
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001650.4532
PWY-5084 (2-ketoglutarate dehydrogenase complex)3261720.4427
PWY-6196 (serine racemization)102810.4379
LIPASYN-PWY (phospholipases)2121300.4343
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251350.4336
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761150.4332
DAPLYSINESYN-PWY (lysine biosynthesis I)3421750.4288
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491430.4259
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491430.4259
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911200.4234
ACETATEUTIL-PWY (superpathway of acetate utilization and formation)2371380.4223
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81680.4200
PWY-5194 (siroheme biosynthesis)3121640.4191
PWY-561 (superpathway of glyoxylate cycle)1621060.4104
PWY-6134 (tyrosine biosynthesis IV)89710.4072
PWY-1269 (CMP-KDO biosynthesis I)3251660.4039
GLYOXYLATE-BYPASS (glyoxylate cycle)1691080.4025



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10376   EG10375   EG10106   EG10105   EG10104   EG10103   EG10102   EG10100   EG10099   EG10098   
EG111990.9989660.9990950.9990.9986620.9985920.9986950.9989240.9985240.9987540.998597
EG103760.9999460.9991520.9995490.9994970.9995420.9995920.9994890.9995880.999538
EG103750.9990630.9995310.9994990.9995410.9995680.9994830.9995970.999533
EG101060.9989410.9988760.9990090.9990830.9987440.9991840.998882
EG101050.9999840.9999870.9998270.9999690.9999611
EG101040.9999620.9997620.9999830.9999310.999995
EG101030.9998720.9999220.9999820.999955
EG101020.9997230.9998690.999793
EG101000.9998770.999981
EG100990.999925
EG10098



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PAIRWISE BLAST SCORES:

  EG11199   EG10376   EG10375   EG10106   EG10105   EG10104   EG10103   EG10102   EG10100   EG10099   EG10098   
EG111990.0f0----------
EG10376-0.0f0---------
EG10375--0.0f0--------
EG10106---0.0f0-------
EG10105----0.0f0------
EG10104-----0.0f0-----
EG10103------0.0f0----
EG10102-------0.0f0---
EG10100--------0.0f0--
EG10099---------0.0f0-
EG10098----------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- ATPSYN-CPLX (ATP synthase) (degree of match pw to cand: 0.875, degree of match cand to pw: 0.636, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9985 EG10100 (atpC) ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
   *in cand* 0.9997 0.9987 EG10105 (atpH) ATPH-MONOMER (ATP synthase, F1 complex, δ subunit)
   *in cand* 0.9997 0.9986 EG10098 (atpA) ATPA-MONOMER (ATP synthase, F1 complex, α subunit)
   *in cand* 0.9996 0.9986 EG10104 (atpG) ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)
             0.9996 0.9985 EG10101 (atpD) ATPD-MONOMER (ATP synthase, F1 complex, β subunit)
   *in cand* 0.9996 0.9989 EG10102 (atpE) ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
   *in cand* 0.9997 0.9987 EG10103 (atpF) ATPF-MONOMER (ATP synthase, F0 complex, b subunit)
   *in cand* 0.9997 0.9988 EG10099 (atpB) ATPB-MONOMER (ATP synthase, F0 complex, a subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9987 EG10106 (atpI) EG10106-MONOMER (AtpI)
   *in cand* 0.9995 0.9991 EG10375 (mnmG) EG10375-MONOMER (protein involved in a tRNA modification pathway)
   *in cand* 0.9995 0.9990 EG10376 (rsmG) EG10376-MONOMER (16S rRNA m7G527 methyltransferase)
   *in cand* 0.9989 0.9985 EG11199 (mioC) EG11199-MONOMER (flavoprotein involved in biotin synthesis)

- F-O-CPLX (ATP synthase, F0 complex) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.273, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9988 EG10099 (atpB) ATPB-MONOMER (ATP synthase, F0 complex, a subunit)
   *in cand* 0.9997 0.9987 EG10103 (atpF) ATPF-MONOMER (ATP synthase, F0 complex, b subunit)
   *in cand* 0.9996 0.9989 EG10102 (atpE) ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9986 EG10098 (atpA) ATPA-MONOMER (ATP synthase, F1 complex, α subunit)
   *in cand* 0.9996 0.9985 EG10100 (atpC) ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
   *in cand* 0.9996 0.9986 EG10104 (atpG) ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)
   *in cand* 0.9997 0.9987 EG10105 (atpH) ATPH-MONOMER (ATP synthase, F1 complex, δ subunit)
   *in cand* 0.9991 0.9987 EG10106 (atpI) EG10106-MONOMER (AtpI)
   *in cand* 0.9995 0.9991 EG10375 (mnmG) EG10375-MONOMER (protein involved in a tRNA modification pathway)
   *in cand* 0.9995 0.9990 EG10376 (rsmG) EG10376-MONOMER (16S rRNA m7G527 methyltransferase)
   *in cand* 0.9989 0.9985 EG11199 (mioC) EG11199-MONOMER (flavoprotein involved in biotin synthesis)

- DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I) (degree of match pw to cand: 0.206, degree of match cand to pw: 0.636, average score: 0.570)
  Genes in pathway or complex:
             0.2572 0.0301 EG11809 (purT) GARTRANSFORMYL2-MONOMER (phosphoribosylglycinamide formyltransferase 2)
             0.0297 0.0015 EG10798 (purM) AIRS-MONOMER (PurM)
             0.1175 0.0021 EG10797 (purL) FGAMSYN-MONOMER (phosphoribosylformylglycinamide synthetase)
             0.8681 0.7107 EG10792 (purD) GLYCRIBONUCSYN-MONOMER (phosphoribosylamine-glycine ligase)
             0.0121 0.0010 EG10794 (purF) PRPPAMIDOTRANS-MONOMER (PurF)
             0.8265 0.5980 EG10796 (purK) PURK-MONOMER (N5-carboxyaminoimidazole ribonucleotide synthetase monomer)
             0.8362 0.5173 EG10793 (purE) PURE-MONOMER (PurE)
             0.9575 0.8907 EG10795 (purH) AICARTRANSIMPCYCLO-CPLX (AICAR transformylase / IMP cyclohydrolase)
             0.1448 0.0489 EG10791 (purC) SAICARSYN-MONOMER (PurC)
             0.9412 0.8342 EG10965 (gmk) GUANYL-KIN-MONOMER (Gmk)
             0.0618 0.0030 EG10420 (guaA) GMP-SYN-MONOMER (GMP synthetase)
             0.1570 0.0018 EG10421 (guaB) IMP-DEHYDROG-MONOMER (GuaB)
   *in cand* 0.9996 0.9985 EG10100 (atpC) ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
   *in cand* 0.9997 0.9987 EG10105 (atpH) ATPH-MONOMER (ATP synthase, F1 complex, δ subunit)
   *in cand* 0.9997 0.9986 EG10098 (atpA) ATPA-MONOMER (ATP synthase, F1 complex, α subunit)
   *in cand* 0.9996 0.9986 EG10104 (atpG) ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)
             0.9996 0.9985 EG10101 (atpD) ATPD-MONOMER (ATP synthase, F1 complex, β subunit)
   *in cand* 0.9996 0.9989 EG10102 (atpE) ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
   *in cand* 0.9997 0.9987 EG10103 (atpF) ATPF-MONOMER (ATP synthase, F0 complex, b subunit)
   *in cand* 0.9997 0.9988 EG10099 (atpB) ATPB-MONOMER (ATP synthase, F0 complex, a subunit)
             0.0428 0.0000 EG10650 (ndk) NUCLEOSIDE-DIP-KIN-MONOMER (Ndk)
             0.1327 0.0028 EG12381 (nrdF) NRDF-MONOMER (NrdF)
             0.3916 0.1109 EG20257 (nrdE) NRDE-MONOMER (NrdE)
             0.5560 0.2549 EG11417 (nrdD) RIBONUCLEOSIDE-TRIP-REDUCT-MONOMER (ribonucleoside-triphosphate reductase)
             0.0747 0.0011 EG10661 (nrdB) NRDB-MONOMER (NrdB)
             0.1223 0.0287 EG10660 (nrdA) NRDA-MONOMER (NrdA)
             0.1629 0.0347 EG10032 (adk) ADENYL-KIN-MONOMER (adenylate kinase)
             0.0720 0.0013 EG11314 (purB) ASL-MONOMER (5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole lyase [multifunctional])
             0.8086 0.4605 EG10790 (purA) ADENYLOSUCCINATE-SYN-MONOMER (PurA)
             0.4084 0.2345 G7401 (nrdH) G7401-MONOMER (glutaredoxin-like protein)
             0.1332 0.0043 EG10318 (fldA) OX-FLAVODOXIN1 (oxidized flavodoxin 1)
             0.1850 0.0550 EG12697 (fldB) OX-FLAVODOXIN2 (oxidized flavodoxin 2)
             0.9898 0.9795 EG11031 (trxA) OX-THIOREDOXIN-MONOMER (oxidized thioredoxin)
             0.7031 0.3432 EG11887 (trxC) OX-THIOREDOXIN2-MONOMER (oxidized thioredoxin 2)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9987 EG10106 (atpI) EG10106-MONOMER (AtpI)
   *in cand* 0.9995 0.9991 EG10375 (mnmG) EG10375-MONOMER (protein involved in a tRNA modification pathway)
   *in cand* 0.9995 0.9990 EG10376 (rsmG) EG10376-MONOMER (16S rRNA m7G527 methyltransferase)
   *in cand* 0.9989 0.9985 EG11199 (mioC) EG11199-MONOMER (flavoprotein involved in biotin synthesis)

- PWY-6126 (adenosine nucleotides de novo biosynthesis) (degree of match pw to cand: 0.318, degree of match cand to pw: 0.636, average score: 0.534)
  Genes in pathway or complex:
             0.8086 0.4605 EG10790 (purA) ADENYLOSUCCINATE-SYN-MONOMER (PurA)
             0.0720 0.0013 EG11314 (purB) ASL-MONOMER (5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole lyase [multifunctional])
             0.1629 0.0347 EG10032 (adk) ADENYL-KIN-MONOMER (adenylate kinase)
             0.0747 0.0011 EG10661 (nrdB) NRDB-MONOMER (NrdB)
             0.1223 0.0287 EG10660 (nrdA) NRDA-MONOMER (NrdA)
             0.5560 0.2549 EG11417 (nrdD) RIBONUCLEOSIDE-TRIP-REDUCT-MONOMER (ribonucleoside-triphosphate reductase)
             0.1327 0.0028 EG12381 (nrdF) NRDF-MONOMER (NrdF)
             0.3916 0.1109 EG20257 (nrdE) NRDE-MONOMER (NrdE)
             0.0428 0.0000 EG10650 (ndk) NUCLEOSIDE-DIP-KIN-MONOMER (Ndk)
   *in cand* 0.9996 0.9985 EG10100 (atpC) ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
   *in cand* 0.9997 0.9987 EG10105 (atpH) ATPH-MONOMER (ATP synthase, F1 complex, δ subunit)
   *in cand* 0.9997 0.9986 EG10098 (atpA) ATPA-MONOMER (ATP synthase, F1 complex, α subunit)
   *in cand* 0.9996 0.9986 EG10104 (atpG) ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)
             0.9996 0.9985 EG10101 (atpD) ATPD-MONOMER (ATP synthase, F1 complex, β subunit)
   *in cand* 0.9996 0.9989 EG10102 (atpE) ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
   *in cand* 0.9997 0.9987 EG10103 (atpF) ATPF-MONOMER (ATP synthase, F0 complex, b subunit)
   *in cand* 0.9997 0.9988 EG10099 (atpB) ATPB-MONOMER (ATP synthase, F0 complex, a subunit)
             0.4084 0.2345 G7401 (nrdH) G7401-MONOMER (glutaredoxin-like protein)
             0.1332 0.0043 EG10318 (fldA) OX-FLAVODOXIN1 (oxidized flavodoxin 1)
             0.1850 0.0550 EG12697 (fldB) OX-FLAVODOXIN2 (oxidized flavodoxin 2)
             0.9898 0.9795 EG11031 (trxA) OX-THIOREDOXIN-MONOMER (oxidized thioredoxin)
             0.7031 0.3432 EG11887 (trxC) OX-THIOREDOXIN2-MONOMER (oxidized thioredoxin 2)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9987 EG10106 (atpI) EG10106-MONOMER (AtpI)
   *in cand* 0.9995 0.9991 EG10375 (mnmG) EG10375-MONOMER (protein involved in a tRNA modification pathway)
   *in cand* 0.9995 0.9990 EG10376 (rsmG) EG10376-MONOMER (16S rRNA m7G527 methyltransferase)
   *in cand* 0.9989 0.9985 EG11199 (mioC) EG11199-MONOMER (flavoprotein involved in biotin synthesis)

- PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis) (degree of match pw to cand: 0.127, degree of match cand to pw: 0.636, average score: 0.550)
  Genes in pathway or complex:
             0.2466 0.0277 EG10449 (hisG) ATPPHOSRIBOSTRANS-MONOMER (HisG)
             0.3272 0.0278 EG10451 (hisI) HISTCYCLOPRATPPHOS (phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase)
             0.5834 0.0278 EG10444 (hisA) PRIBFAICARPISOM-MONOMER (N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase)
             0.6698 0.0278 EG10448 (hisF) CYCLASE-MONOMER (imidazole glycerol phosphate synthase, HisF subunit)
             0.6371 0.0278 EG10450 (hisH) GLUTAMIDOTRANS-MONOMER (imidazole glycerol phosphate synthase, HisH subunit)
             0.7277 0.0278 EG10445 (hisB) IMIDPHOSPHADEHYDHISTIDPHOSPHA-MONOMER (HisB)
             0.2186 0.0277 EG10446 (hisC) HISTPHOSTRANS-MONOMER (HisC)
             0.4873 0.0277 EG10447 (hisD) HISTDEHYD-MONOMER (HisD)
             0.8086 0.4605 EG10790 (purA) ADENYLOSUCCINATE-SYN-MONOMER (PurA)
             0.0720 0.0013 EG11314 (purB) ASL-MONOMER (5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole lyase [multifunctional])
             0.1629 0.0347 EG10032 (adk) ADENYL-KIN-MONOMER (adenylate kinase)
             0.0747 0.0011 EG10661 (nrdB) NRDB-MONOMER (NrdB)
             0.1223 0.0287 EG10660 (nrdA) NRDA-MONOMER (NrdA)
             0.5560 0.2549 EG11417 (nrdD) RIBONUCLEOSIDE-TRIP-REDUCT-MONOMER (ribonucleoside-triphosphate reductase)
             0.1327 0.0028 EG12381 (nrdF) NRDF-MONOMER (NrdF)
             0.3916 0.1109 EG20257 (nrdE) NRDE-MONOMER (NrdE)
   *in cand* 0.9996 0.9985 EG10100 (atpC) ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
   *in cand* 0.9997 0.9987 EG10105 (atpH) ATPH-MONOMER (ATP synthase, F1 complex, δ subunit)
   *in cand* 0.9997 0.9986 EG10098 (atpA) ATPA-MONOMER (ATP synthase, F1 complex, α subunit)
   *in cand* 0.9996 0.9986 EG10104 (atpG) ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)
             0.9996 0.9985 EG10101 (atpD) ATPD-MONOMER (ATP synthase, F1 complex, β subunit)
   *in cand* 0.9996 0.9989 EG10102 (atpE) ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
   *in cand* 0.9997 0.9987 EG10103 (atpF) ATPF-MONOMER (ATP synthase, F0 complex, b subunit)
   *in cand* 0.9997 0.9988 EG10099 (atpB) ATPB-MONOMER (ATP synthase, F0 complex, a subunit)
             0.1570 0.0018 EG10421 (guaB) IMP-DEHYDROG-MONOMER (GuaB)
             0.0618 0.0030 EG10420 (guaA) GMP-SYN-MONOMER (GMP synthetase)
             0.9412 0.8342 EG10965 (gmk) GUANYL-KIN-MONOMER (Gmk)
             0.1448 0.0489 EG10791 (purC) SAICARSYN-MONOMER (PurC)
             0.9575 0.8907 EG10795 (purH) AICARTRANSIMPCYCLO-CPLX (AICAR transformylase / IMP cyclohydrolase)
             0.8362 0.5173 EG10793 (purE) PURE-MONOMER (PurE)
             0.8265 0.5980 EG10796 (purK) PURK-MONOMER (N5-carboxyaminoimidazole ribonucleotide synthetase monomer)
             0.0121 0.0010 EG10794 (purF) PRPPAMIDOTRANS-MONOMER (PurF)
             0.8681 0.7107 EG10792 (purD) GLYCRIBONUCSYN-MONOMER (phosphoribosylamine-glycine ligase)
             0.1175 0.0021 EG10797 (purL) FGAMSYN-MONOMER (phosphoribosylformylglycinamide synthetase)
             0.0297 0.0015 EG10798 (purM) AIRS-MONOMER (PurM)
             0.2572 0.0301 EG11809 (purT) GARTRANSFORMYL2-MONOMER (phosphoribosylglycinamide formyltransferase 2)
             0.0818 0.0008 EG11539 (pyrH) UMPKI-MONOMER (PyrH)
             0.6539 0.0364 EG10810 (pyrG) CTPSYN-MONOMER (PyrG)
             0.0428 0.0000 EG10650 (ndk) NUCLEOSIDE-DIP-KIN-MONOMER (Ndk)
             0.3616 0.0747 EG10134 (carA) CARBPSYN-SMALL (CarA)
             0.2825 0.0018 EG10135 (carB) CARBPSYN-LARGE (CarB)
             0.9257 0.8804 EG10811 (pyrI) ASPCARBREG-MONOMER (aspartate carbamoyltransferase, PyrI subunit)
             0.8115 0.3727 EG10805 (pyrB) ASPCARBCAT-MONOMER (aspartate carbamoyltransferase, PyrB subunit)
             0.1886 0.0473 EG10806 (pyrC) DIHYDROOROT-MONOMER (PyrC)
             0.9927 0.9793 EG10808 (pyrE) OROPRIBTRANS-MONOMER (PyrE)
             0.0713 0.0007 EG10809 (pyrF) OROTPDECARB-MONOMER (PyrF)
             0.0506 0.0005 EG10807 (pyrD) DIHYDROOROTOX-MONOMER (dihydroorotate dehydrogenase)
             0.5194 0.0041 EG10774 (prs) PRPPSYN-MONOMER (ribose-phosphate diphosphokinase)
             0.9368 0.8850 EG10723 (phnN) EG10723-MONOMER (ribose 1,5-bisphosphokinase)
             0.5027 0.0997 EG10220 (deoB) PPENTOMUT-MONOMER (phosphopentomutase)
             0.4084 0.2345 G7401 (nrdH) G7401-MONOMER (glutaredoxin-like protein)
             0.1332 0.0043 EG10318 (fldA) OX-FLAVODOXIN1 (oxidized flavodoxin 1)
             0.1850 0.0550 EG12697 (fldB) OX-FLAVODOXIN2 (oxidized flavodoxin 2)
             0.9898 0.9795 EG11031 (trxA) OX-THIOREDOXIN-MONOMER (oxidized thioredoxin)
             0.7031 0.3432 EG11887 (trxC) OX-THIOREDOXIN2-MONOMER (oxidized thioredoxin 2)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9987 EG10106 (atpI) EG10106-MONOMER (AtpI)
   *in cand* 0.9995 0.9991 EG10375 (mnmG) EG10375-MONOMER (protein involved in a tRNA modification pathway)
   *in cand* 0.9995 0.9990 EG10376 (rsmG) EG10376-MONOMER (16S rRNA m7G527 methyltransferase)
   *in cand* 0.9989 0.9985 EG11199 (mioC) EG11199-MONOMER (flavoprotein involved in biotin synthesis)
   This pathway has holes

- F-1-CPLX (ATP synthase, F1 complex) (degree of match pw to cand: 0.800, degree of match cand to pw: 0.364, average score: 1.000)
  Genes in pathway or complex:
             0.9996 0.9985 EG10101 (atpD) ATPD-MONOMER (ATP synthase, F1 complex, β subunit)
   *in cand* 0.9996 0.9986 EG10104 (atpG) ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)
   *in cand* 0.9997 0.9986 EG10098 (atpA) ATPA-MONOMER (ATP synthase, F1 complex, α subunit)
   *in cand* 0.9997 0.9987 EG10105 (atpH) ATPH-MONOMER (ATP synthase, F1 complex, δ subunit)
   *in cand* 0.9996 0.9985 EG10100 (atpC) ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9988 EG10099 (atpB) ATPB-MONOMER (ATP synthase, F0 complex, a subunit)
   *in cand* 0.9996 0.9989 EG10102 (atpE) ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
   *in cand* 0.9997 0.9987 EG10103 (atpF) ATPF-MONOMER (ATP synthase, F0 complex, b subunit)
   *in cand* 0.9991 0.9987 EG10106 (atpI) EG10106-MONOMER (AtpI)
   *in cand* 0.9995 0.9991 EG10375 (mnmG) EG10375-MONOMER (protein involved in a tRNA modification pathway)
   *in cand* 0.9995 0.9990 EG10376 (rsmG) EG10376-MONOMER (16S rRNA m7G527 methyltransferase)
   *in cand* 0.9989 0.9985 EG11199 (mioC) EG11199-MONOMER (flavoprotein involved in biotin synthesis)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10098 EG10099 EG10100 EG10102 EG10103 EG10104 EG10105 EG10106 EG10375 EG10376 EG11199 (centered at EG10102)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11199   EG10376   EG10375   EG10106   EG10105   EG10104   EG10103   EG10102   EG10100   EG10099   EG10098   
258/623404/623417/62361/623412/623400/623404/623174/623409/623401/623415/623
AAEO224324:0:Tyes-983406--1311986--0350
AAUR290340:0:Tyes0----------
AAUR290340:2:Tyes------0--2-
AAVE397945:0:Tyes465310-310312309308314307311
ABAC204669:0:Tyes-038--4328--432612684329
ABAU360910:0:Tyes-10-3229322732303231322532323228
ABOR393595:0:Tyes0615616-608606609610604611607
ABUT367737:0:Tyes--611------4320
ACAU438753:0:Tyes0-2922-23252323--2321-2324
ACEL351607:0:Tyes-----52-70-
ACRY349163:8:Tyes1135738--02--4-1
ADEH290397:0:Tyes-18--13110-9212
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