CANDIDATE ID: 114

CANDIDATE ID: 114

NUMBER OF GENES: 10
AVERAGE SCORE:    9.9959102e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- RUVB (ruvB) (b1860)
   Products of gene:
     - EG10924-MONOMER (branch migration of Holliday structures; repair helicase)
     - RUVABC-CPLX (resolvasome)
       Reactions:
        DNA combined with exogenous DNA to form a recombinational junction  =  resolution of recombinational junction formation of two intact strands

- RUVA (ruvA) (b1861)
   Products of gene:
     - EG10923-MONOMER (branch migration of Holliday structures; repair)
     - RUVABC-CPLX (resolvasome)
       Reactions:
        DNA combined with exogenous DNA to form a recombinational junction  =  resolution of recombinational junction formation of two intact strands

- EG12854 (ybgF) (b0742)
   Products of gene:
     - EG12854-MONOMER (predicted periplasmic protein)
     - CPLX0-2201 (The Tol-Pal Cell Envelope Complex)
     - CPLX0-2221 (The Colicin A Import System)
     - CPLX0-2202 (Colicin S4 Transport System)

- EG11137 (yebC) (b1864)
   Products of gene:
     - EG11137-MONOMER (conserved protein)

- EG11110 (ybgC) (b0736)
   Products of gene:
     - EG11110-MONOMER (esterase/thioesterase)
       Reactions:
        1,4-dihydroxy-2-naphthoyl-CoA + H2O  ->  1,4-dihydroxy-2-naphthoate + coenzyme A + H+
         In pathways
         PWY-5850 (PWY-5850)
         PWY-5840 (PWY-5840)
         PWY-5845 (PWY-5845)
         PWY-5860 (PWY-5860)
         PWY-5862 (PWY-5862)
         PWY-5838 (superpathway of menaquinone-8 biosynthesis I)
         PWY-5896 (PWY-5896)
         PWY-5897 (PWY-5897)
         PWY-5898 (PWY-5898)
         PWY-5899 (PWY-5899)
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         PWY-5861 (PWY-5861)
         PWY-5863 (PWY-5863)
         PWY-5837 (1,4-dihydroxy-2-naphthoate biosynthesis I)
         PWY-5791 (PWY-5791)

- EG11011 (tolR) (b0738)
   Products of gene:
     - EG11011-MONOMER (TolR)
     - CPLX0-2201 (The Tol-Pal Cell Envelope Complex)
     - CPLX0-2221 (The Colicin A Import System)
     - CPLX0-2202 (Colicin S4 Transport System)

- EG11010 (tolQ) (b0737)
   Products of gene:
     - EG11010-MONOMER (TolQ)
     - CPLX0-2201 (The Tol-Pal Cell Envelope Complex)
     - CPLX0-2221 (The Colicin A Import System)
     - CPLX0-2202 (Colicin S4 Transport System)

- EG11008 (tolB) (b0740)
   Products of gene:
     - EG11008-MONOMER (TolB)
     - CPLX0-2201 (The Tol-Pal Cell Envelope Complex)
     - CPLX0-2221 (The Colicin A Import System)
     - CPLX0-2202 (Colicin S4 Transport System)

- EG10925 (ruvC) (b1863)
   Products of gene:
     - EG10925-MONOMER (Holliday junction nuclease; resolution of structures; repair)
     - RUVABC-CPLX (resolvasome)
       Reactions:
        DNA combined with exogenous DNA to form a recombinational junction  =  resolution of recombinational junction formation of two intact strands

- EG10684 (pal) (b0741)
   Products of gene:
     - EG10684-MONOMER (Pal)
     - CPLX0-2201 (The Tol-Pal Cell Envelope Complex)
     - CPLX0-2221 (The Colicin A Import System)
     - CPLX0-2202 (Colicin S4 Transport System)



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ORGANISMS CONTAINING AT LEAST 9 GENES FROM THE GROUP:

Total number of orgs: 213
Effective number of orgs (counting one per cluster within 468 clusters): 151

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175810
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295310
YPES386656 ncbi Yersinia pestis Pestoides F10
YPES377628 ncbi Yersinia pestis Nepal51610
YPES360102 ncbi Yersinia pestis Antiqua10
YPES349746 ncbi Yersinia pestis Angola10
YPES214092 ncbi Yersinia pestis CO9210
YPES187410 ncbi Yersinia pestis KIM 1010
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808110
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A10
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 31101810
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC1033110
XFAS405440 ncbi Xylella fastidiosa M1210
XFAS183190 ncbi Xylella fastidiosa Temecula110
XFAS160492 ncbi Xylella fastidiosa 9a5c10
XCAM487884 Xanthomonas campestris pv. paulliniae10
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-1010
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 800410
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 3391310
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 30610
XAUT78245 ncbi Xanthobacter autotrophicus Py210
VVUL196600 ncbi Vibrio vulnificus YJ0169
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106339
VFIS312309 ncbi Vibrio fischeri ES1149
VEIS391735 ncbi Verminephrobacter eiseniae EF01-210
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169619
TTUR377629 ncbi Teredinibacter turnerae T790110
TDEN292415 ncbi Thiobacillus denitrificans ATCC 2525910
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT210
SSP94122 ncbi Shewanella sp. ANA-310
SSP644076 Silicibacter sp. TrichCH4B9
SSP292414 ncbi Ruegeria sp. TM10409
SSON300269 ncbi Shigella sonnei Ss04610
SSED425104 ncbi Shewanella sediminis HAW-EB310
SPRO399741 ncbi Serratia proteamaculans 56810
SPEA398579 ncbi Shewanella pealeana ATCC 70034510
SONE211586 ncbi Shewanella oneidensis MR-110
SMEL266834 ncbi Sinorhizobium meliloti 102110
SMED366394 ncbi Sinorhizobium medicae WSM41910
SLOI323850 ncbi Shewanella loihica PV-410
SHAL458817 ncbi Shewanella halifaxensis HAW-EB410
SGLO343509 ncbi Sodalis glossinidius morsitans10
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB10
SFLE373384 ncbi Shigella flexneri 5 str. 840110
SFLE198214 ncbi Shigella flexneri 2a str. 3019
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47610
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6710
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 915010
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1810
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty210
SDYS300267 ncbi Shigella dysenteriae Sd19710
SDEN318161 ncbi Shewanella denitrificans OS21710
SBOY300268 ncbi Shigella boydii Sb22710
SBAL402882 ncbi Shewanella baltica OS18510
SBAL399599 ncbi Shewanella baltica OS19510
SACI56780 ncbi Syntrophus aciditrophicus SB10
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170259
RSOL267608 ncbi Ralstonia solanacearum GMI100010
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111709
RPAL316058 ncbi Rhodopseudomonas palustris HaA210
RPAL316057 ncbi Rhodopseudomonas palustris BisB510
RPAL316056 ncbi Rhodopseudomonas palustris BisB1810
RPAL316055 ncbi Rhodopseudomonas palustris BisA5310
RPAL258594 ncbi Rhodopseudomonas palustris CGA00910
RMET266264 ncbi Ralstonia metallidurans CH3410
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38419
RFER338969 ncbi Rhodoferax ferrireducens T11810
REUT381666 ncbi Ralstonia eutropha H1610
REUT264198 ncbi Ralstonia eutropha JMP13410
RETL347834 ncbi Rhizobium etli CFN 4210
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC300010
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a10
PSTU379731 ncbi Pseudomonas stutzeri A150110
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-110
PSP296591 ncbi Polaromonas sp. JS66610
PPUT76869 ncbi Pseudomonas putida GB-110
PPUT351746 ncbi Pseudomonas putida F110
PPUT160488 ncbi Pseudomonas putida KT244010
PPRO298386 ncbi Photobacterium profundum SS910
PNAP365044 ncbi Polaromonas naphthalenivorans CJ210
PMUL272843 ncbi Pasteurella multocida multocida Pm709
PMEN399739 ncbi Pseudomonas mendocina ymp10
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO110
PING357804 ncbi Psychromonas ingrahamii 379
PFLU220664 ncbi Pseudomonas fluorescens Pf-510
PFLU216595 ncbi Pseudomonas fluorescens SBW2510
PFLU205922 ncbi Pseudomonas fluorescens Pf0-110
PENT384676 ncbi Pseudomonas entomophila L4810
PCRY335284 ncbi Psychrobacter cryohalolentis K59
PCAR338963 ncbi Pelobacter carbinolicus DSM 238010
PATL342610 ncbi Pseudoalteromonas atlantica T6c9
PARC259536 ncbi Psychrobacter arcticus 273-49
PAER208964 ncbi Pseudomonas aeruginosa PAO110
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA1410
OCAR504832 ncbi Oligotropha carboxidovorans OM510
OANT439375 ncbi Ochrobactrum anthropi ATCC 4918810
NWIN323098 ncbi Nitrobacter winogradskyi Nb-25510
NOCE323261 ncbi Nitrosococcus oceani ATCC 1970710
NMUL323848 ncbi Nitrosospira multiformis ATCC 2519610
NHAM323097 ncbi Nitrobacter hamburgensis X1410
NEUT335283 ncbi Nitrosomonas eutropha C9110
NEUR228410 ncbi Nitrosomonas europaea ATCC 1971810
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124449
MXAN246197 ncbi Myxococcus xanthus DK 162210
MSP409 Methylobacterium sp.10
MSP266779 ncbi Chelativorans sp. BNC110
MPET420662 ncbi Methylibium petroleiphilum PM110
MMAG342108 ncbi Magnetospirillum magneticum AMB-19
MLOT266835 ncbi Mesorhizobium loti MAFF30309910
MFLA265072 ncbi Methylobacillus flagellatus KT10
MEXT419610 ncbi Methylobacterium extorquens PA19
MCAP243233 ncbi Methylococcus capsulatus Bath10
MAQU351348 ncbi Marinobacter aquaeolei VT89
LPNE400673 ncbi Legionella pneumophila Corby10
LPNE297246 ncbi Legionella pneumophila Paris10
LPNE297245 ncbi Legionella pneumophila Lens10
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 110
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-009
LCHO395495 ncbi Leptothrix cholodnii SP-610
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857810
JSP375286 ncbi Janthinobacterium sp. Marseille10
JSP290400 ncbi Jannaschia sp. CCS19
ILOI283942 ncbi Idiomarina loihiensis L2TR10
HSOM228400 ncbi Haemophilus somnus 23369
HSOM205914 ncbi Haemophilus somnus 129PT9
HINF71421 ncbi Haemophilus influenzae Rd KW209
HINF374930 ncbi Haemophilus influenzae PittEE9
HINF281310 ncbi Haemophilus influenzae 86-028NP9
HHAL349124 ncbi Halorhodospira halophila SL19
HDUC233412 ncbi Haemophilus ducreyi 35000HP9
HCHE349521 ncbi Hahella chejuensis KCTC 239610
HARS204773 ncbi Herminiimonas arsenicoxydans10
GURA351605 ncbi Geobacter uraniireducens Rf410
GSUL243231 ncbi Geobacter sulfurreducens PCA10
GMET269799 ncbi Geobacter metallireducens GS-1510
GBET391165 ncbi Granulibacter bethesdensis CGDNIH19
ESP42895 Enterobacter sp.10
EFER585054 ncbi Escherichia fergusonii ATCC 3546910
ECOL83334 Escherichia coli O157:H710
ECOL585397 ncbi Escherichia coli ED1a10
ECOL585057 ncbi Escherichia coli IAI3910
ECOL585056 ncbi Escherichia coli UMN02610
ECOL585055 ncbi Escherichia coli 5598910
ECOL585035 ncbi Escherichia coli S8810
ECOL585034 ncbi Escherichia coli IAI110
ECOL481805 ncbi Escherichia coli ATCC 873910
ECOL469008 ncbi Escherichia coli BL21(DE3)10
ECOL439855 ncbi Escherichia coli SMS-3-510
ECOL413997 ncbi Escherichia coli B str. REL60610
ECOL409438 ncbi Escherichia coli SE1110
ECOL405955 ncbi Escherichia coli APEC O110
ECOL364106 ncbi Escherichia coli UTI8910
ECOL362663 ncbi Escherichia coli 53610
ECOL331111 ncbi Escherichia coli E24377A10
ECOL316407 ncbi Escherichia coli K-12 substr. W311010
ECOL199310 ncbi Escherichia coli CFT07310
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104310
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough9
DSHI398580 ncbi Dinoroseobacter shibae DFL 1210
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G2010
DARO159087 ncbi Dechloromonas aromatica RCB10
CVIO243365 ncbi Chromobacterium violaceum ATCC 124729
CTEP194439 ncbi Chlorobium tepidum TLS9
CSP78 Caulobacter sp.10
CSP501479 Citreicella sp. SE459
CSAL290398 ncbi Chromohalobacter salexigens DSM 304310
CPSY167879 ncbi Colwellia psychrerythraea 34H9
CJAP155077 Cellvibrio japonicus9
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-11110
CBUR360115 ncbi Coxiella burnetii RSA 33110
CBUR227377 ncbi Coxiella burnetii RSA 49310
CAULO ncbi Caulobacter crescentus CB159
BVIE269482 ncbi Burkholderia vietnamiensis G410
BTHA271848 ncbi Burkholderia thailandensis E26410
BSUI470137 ncbi Brucella suis ATCC 2344510
BSUI204722 ncbi Brucella suis 133010
BSP376 Bradyrhizobium sp.10
BSP36773 Burkholderia sp.10
BPSE320373 ncbi Burkholderia pseudomallei 66810
BPSE320372 ncbi Burkholderia pseudomallei 1710b10
BPSE272560 ncbi Burkholderia pseudomallei K9624310
BPET94624 Bordetella petrii10
BPER257313 ncbi Bordetella pertussis Tohama I10
BPAR257311 ncbi Bordetella parapertussis 1282210
BOVI236 Brucella ovis10
BMEL359391 ncbi Brucella melitensis biovar Abortus 230810
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M10
BMAL320389 ncbi Burkholderia mallei NCTC 1024710
BMAL320388 ncbi Burkholderia mallei SAVP110
BMAL243160 ncbi Burkholderia mallei ATCC 2334410
BJAP224911 ncbi Bradyrhizobium japonicum USDA 11010
BCEN331272 ncbi Burkholderia cenocepacia HI242410
BCEN331271 ncbi Burkholderia cenocepacia AU 105410
BCAN483179 ncbi Brucella canis ATCC 2336510
BBRO257310 ncbi Bordetella bronchiseptica RB5010
BAMB398577 ncbi Burkholderia ambifaria MC40-610
BAMB339670 ncbi Burkholderia ambifaria AMMD10
BABO262698 ncbi Brucella abortus bv. 1 str. 9-94110
ASP76114 ncbi Aromatoleum aromaticum EbN110
ASP62977 ncbi Acinetobacter sp. ADP110
ASP62928 ncbi Azoarcus sp. BH7210
ASP232721 ncbi Acidovorax sp. JS4210
ASAL382245 ncbi Aeromonas salmonicida salmonicida A44910
APLE416269 ncbi Actinobacillus pleuropneumoniae L209
AHYD196024 Aeromonas hydrophila dhakensis10
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 2327010
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-19
ACRY349163 ncbi Acidiphilium cryptum JF-59
ACAU438753 ncbi Azorhizobium caulinodans ORS 57110
ABOR393595 ncbi Alcanivorax borkumensis SK210
ABAU360910 ncbi Bordetella avium 197N9
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin34510
AAVE397945 ncbi Acidovorax citrulli AAC00-110


Names of the homologs of the genes in the group in each of these orgs
  RUVB   RUVA   EG12854   EG11137   EG11110   EG11011   EG11010   EG11008   EG10925   EG10684   
YPSE349747 YPSIP31758_2030YPSIP31758_2031YPSIP31758_2866YPSIP31758_2033YPSIP31758_2872YPSIP31758_2870YPSIP31758_2871YPSIP31758_2868YPSIP31758_2032YPSIP31758_2867
YPSE273123 YPTB2041YPTB2040YPTB1161YPTB2038YPTB1155YPTB1157YPTB1156YPTB1159YPTB2039YPTB1160
YPES386656 YPDSF_1064YPDSF_1065YPDSF_2570YPDSF_1067YPDSF_2576YPDSF_2574YPDSF_2575YPDSF_2572YPDSF_1066YPDSF_2571
YPES377628 YPN_1535YPN_1534YPN_2872YPN_1532YPN_2878YPN_2876YPN_2877YPN_2874YPN_1533YPN_2873
YPES360102 YPA_1441YPA_1440YPA_0604YPA_1437YPA_0598YPA_0600YPA_0599YPA_0602YPA_1438YPA_0603
YPES349746 YPANGOLA_A2420YPANGOLA_A2421YPANGOLA_A1399YPANGOLA_A2424YPANGOLA_A3047YPANGOLA_A1395YPANGOLA_A1394YPANGOLA_A1397YPANGOLA_A2423YPANGOLA_A1398
YPES214092 YPO2058YPO2057YPO1126YPO2055YPO1120YPO1122YPO1121YPO1124YPO2056YPO1125
YPES187410 Y2252Y2253Y3053Y2255Y3059Y3057Y3058Y3055Y2254Y3054
YENT393305 YE2392YE2393YE2930YE2395YE2936YE2934YE2935YE2932YE2394YE2931
XORY360094 XOOORF_3306XOOORF_3308XOOORF_3299XOOORF_3310XOOORF_3305XOOORF_3303XOOORF_3304XOOORF_3301XOOORF_3309XOOORF_3300
XORY342109 XOO1547XOO1545XOO1554XOO1543XOO1548XOO1550XOO1549XOO1552XOO1544XOO1553
XORY291331 XOO1663XOO1661XOO1670XOO1659XOO1664XOO1666XOO1665XOO1668XOO1660XOO1669
XFAS405440 XFASM12_1063XFASM12_1061XFASM12_1070XFASM12_1059XFASM12_1064XFASM12_1066XFASM12_1065XFASM12_1068XFASM12_1060XFASM12_1069
XFAS183190 PD_0889PD_0887PD_0896PD_0885PD_0890PD_0892PD_0891PD_0894PD_0886PD_0895
XFAS160492 XF1902XF1904XF1895XF1906XF1901XF1899XF1900XF1897XF1905XF1896
XCAM487884 XCC-B100_1174XCC-B100_1171XCC-B100_1181XCC-B100_1169XCC-B100_1175XCC-B100_1177XCC-B100_1176XCC-B100_1179XCC-B100_1170XCC-B100_1180
XCAM316273 XCAORF_3345XCAORF_3348XCAORF_3338XCAORF_3350XCAORF_3344XCAORF_3342XCAORF_3343XCAORF_3340XCAORF_3349XCAORF_3339
XCAM314565 XC_1136XC_1133XC_1143XC_1131XC_1137XC_1139XC_1138XC_1141XC_1132XC_1142
XCAM190485 XCC3023XCC3025XCC3016XCC3027XCC3022XCC3020XCC3021XCC3018XCC3026XCC3017
XAXO190486 XAC3147XAC3149XAC3140XAC3151XAC3146XAC3144XAC3145XAC3142XAC3150XAC3141
XAUT78245 XAUT_3069XAUT_3067XAUT_3081XAUT_3062XAUT_3072XAUT_3058XAUT_3059XAUT_3056XAUT_3065XAUT_3080
VVUL196600 VV2284VV2285VV2273VV2279VV2277VV2278VV2275VV2287VV2274
VPAR223926 VP1052VP1051VP1062VP1056VP1058VP1057VP1060VP1048VP1061
VFIS312309 VF0952VF0951VF0964VF0957VF0959VF0958VF0962VF0950VF0963
VEIS391735 VEIS_4070VEIS_4068VEIS_1013VEIS_4238VEIS_2533VEIS_4795VEIS_4794VEIS_1011VEIS_2947VEIS_1012
VCHO VC1845VC1846VC1834VC1840VC1838VC1839VC1836VC1847VC1835
TTUR377629 TERTU_3434TERTU_3435TERTU_3427TERTU_0864TERTU_3433TERTU_3431TERTU_3432TERTU_3429TERTU_3436TERTU_3428
TDEN292415 TBD_2211TBD_2213TBD_2204TBD_2215TBD_2210TBD_2208TBD_2209TBD_2206TBD_2214TBD_2205
STYP99287 STM1894STM1895STM0750STM1899STM0744STM0746STM0745STM0748STM1898STM0749
SSP94122 SHEWANA3_1957SHEWANA3_1956SHEWANA3_2529SHEWANA3_1954SHEWANA3_2535SHEWANA3_2533SHEWANA3_2534SHEWANA3_2531SHEWANA3_1955SHEWANA3_2530
SSP644076 SCH4B_2536SCH4B_2537SCH4B_1855SCH4B_2533SCH4B_2531SCH4B_2532SCH4B_2529SCH4B_2538SCH4B_2528
SSP292414 TM1040_2371TM1040_2372TM1040_1893TM1040_2369TM1040_2367TM1040_2368TM1040_2365TM1040_2373TM1040_2364
SSON300269 SSO_1281SSO_1280SSO_0694SSO_1277SSO_0688SSO_0690SSO_0689SSO_0692SSO_1278SSO_0693
SSED425104 SSED_2034SSED_2033SSED_1859SSED_2031SSED_1853SSED_1855SSED_1854SSED_1857SSED_2032SSED_1858
SPRO399741 SPRO_2776SPRO_2777SPRO_1281SPRO_2779SPRO_1275SPRO_1277SPRO_1276SPRO_1279SPRO_2778SPRO_1280
SPEA398579 SPEA_2362SPEA_2363SPEA_2562SPEA_2365SPEA_2568SPEA_2566SPEA_2567SPEA_2564SPEA_2364SPEA_2563
SONE211586 SO_2429SO_2430SO_2746SO_2432SO_2752SO_2750SO_2751SO_2748SO_2431SO_2747
SMEL266834 SMC03965SMC03966SMC02941SMC03969SMC03960SMC03957SMC03958SMC04461SMC03967SMC02942
SMED366394 SMED_2637SMED_2638SMED_2625SMED_2641SMED_2632SMED_1147SMED_2630SMED_2627SMED_2639SMED_2626
SLOI323850 SHEW_2075SHEW_2076SHEW_1529SHEW_2078SHEW_1523SHEW_1525SHEW_1524SHEW_1527SHEW_2077SHEW_1528
SHAL458817 SHAL_1922SHAL_1921SHAL_1693SHAL_1919SHAL_1687SHAL_1689SHAL_1688SHAL_1691SHAL_1920SHAL_1692
SGLO343509 SG1262SG1261SG0888SG1259SG0882SG0884SG0883SG0886SG1260SG0887
SFUM335543 SFUM_0993SFUM_0994SFUM_0757SFUM_0996SFUM_1216SFUM_0753SFUM_0752SFUM_0755SFUM_0995SFUM_0756
SFLE373384 SFV_1862SFV_1863SFV_0594SFV_1866SFV_0600SFV_0598SFV_0599SFV_0596SFV_1865SFV_0595
SFLE198214 AAN43427.1AAN43428.1AAN42199.1AAN42205.1AAN42203.1AAN42204.1AAN42201.1AAN43430.1AAN42200.1
SENT454169 SEHA_C2108SEHA_C2109SEHA_C0877SEHA_C2113SEHA_C0871SEHA_C0873SEHA_C0872SEHA_C0875SEHA_C2112SEHA_C0876
SENT321314 SCH_1902SCH_1903SCH_0754SCH_1907SCH_0748SCH_0750SCH_0749SCH_0752SCH_1906SCH_0753
SENT295319 SPA0975SPA0974SPA1993SPA0970SPA1999SPA1997SPA1998SPA1995SPA0971SPA1994
SENT220341 STY2102STY2103STY0796STY2107STY0790STY0792STY0791STY0794STY2106STY0795
SENT209261 T0983T0982T2126T0978T2132T2130T2131T2128T0979T2127
SDYS300267 SDY_1147SDY_1148SDY_0690SDY_1151SDY_0684SDY_0686SDY_0685SDY_0688SDY_1150SDY_0689
SDEN318161 SDEN_1883SDEN_1884SDEN_1396SDEN_1886SDEN_1390SDEN_1392SDEN_1391SDEN_1394SDEN_1885SDEN_1395
SBOY300268 SBO_1177SBO_1178SBO_0601SBO_1187SBO_0595SBO_0597SBO_0596SBO_0599SBO_1186SBO_0600
SBAL402882 SHEW185_2303SHEW185_2304SHEW185_1744SHEW185_2306SHEW185_1738SHEW185_1740SHEW185_1739SHEW185_1742SHEW185_2305SHEW185_1743
SBAL399599 SBAL195_2419SBAL195_2420SBAL195_1787SBAL195_2422SBAL195_1781SBAL195_1783SBAL195_1782SBAL195_1785SBAL195_2421SBAL195_1786
SACI56780 SYN_02971SYN_02972SYN_00190SYN_02974SYN_00892SYN_00186SYN_00185SYN_00188SYN_02973SYN_00189
RSPH349102 RSPH17025_1233RSPH17025_1231RSPH17025_0577RSPH17025_0558RSPH17025_0560RSPH17025_0559RSPH17025_0562RSPH17025_1230RSPH17025_0563
RSOL267608 RSC0500RSC0501RSC0737RSC2190RSC0731RSC0733RSC0732RSC0735RSC0503RSC0736
RRUB269796 RRU_A1089RRU_A1096RRU_A1086RRU_A1090RRU_A1092RRU_A1091RRU_A1094RRU_A1087RRU_A1095
RPAL316058 RPB_4269RPB_4271RPB_1816RPB_4273RPB_4268RPB_1810RPB_1809RPB_1812RPB_4272RPB_1815
RPAL316057 RPD_4167RPD_4169RPD_4143RPD_4171RPD_4165RPD_4149RPD_4150RPD_4147RPD_4170RPD_4144
RPAL316056 RPC_4803RPC_4805RPC_4747RPC_4807RPC_1924RPC_4753RPC_4754RPC_4751RPC_4806RPC_4748
RPAL316055 RPE_4767RPE_4769RPE_4701RPE_4771RPE_4763RPE_4709RPE_4710RPE_4707RPE_4770RPE_4702
RPAL258594 RPA1102RPA1100RPA1124RPA1097RPA1103RPA1118RPA1117RPA1120RPA1099RPA1123
RMET266264 RMET_0423RMET_0424RMET_2673RMET_0785RMET_2679RMET_2677RMET_2678RMET_2675RMET_0426RMET_2674
RLEG216596 RL3990RL3967RL3983RL3974RL3972RL3973RL3969RL3986RL3968
RFER338969 RFER_0820RFER_0739RFER_2094RFER_2075RFER_1529RFER_2673RFER_2672RFER_2092RFER_3417RFER_2093
REUT381666 H16_A0497H16_A0498PHG146H16_A0916H16_A2833H16_A2831H16_A2832H16_A2829H16_A0500H16_A2828
REUT264198 REUT_A0483REUT_A0484REUT_A0797REUT_A2522REUT_A0791REUT_A0793REUT_A0792REUT_A0795REUT_A0486REUT_A0796
RETL347834 RHE_CH03482RHE_CH03481RHE_CH03460RHE_CH03475RHE_CH03467RHE_CH03465RHE_CH03466RHE_CH03462RHE_CH03478RHE_CH03461
PSYR223283 PSPTO_3977PSPTO_3978PSPTO_3970PSPTO_3980PSPTO_3976PSPTO_3974PSPTO_3975PSPTO_3972PSPTO_3979PSPTO_3971
PSYR205918 PSYR_1410PSYR_1409PSYR_1417PSYR_1407PSYR_1411PSYR_1413PSYR_1412PSYR_1415PSYR_1408PSYR_1416
PSTU379731 PST_2808PST_2809PST_2801PST_2811PST_2807PST_2805PST_2806PST_2803PST_2810PST_2802
PSP312153 PNUC_1880PNUC_1879PNUC_0273PNUC_0618PNUC_1340PNUC_0277PNUC_0278PNUC_0275PNUC_1878PNUC_0274
PSP296591 BPRO_4093BPRO_4094BPRO_1986BPRO_1967BPRO_2889BPRO_2891BPRO_2890BPRO_1984BPRO_1083BPRO_1985
PPUT76869 PPUTGB1_4201PPUTGB1_4202PPUTGB1_4194PPUTGB1_4204PPUTGB1_4200PPUTGB1_4198PPUTGB1_4199PPUTGB1_4196PPUTGB1_4203PPUTGB1_4195
PPUT351746 PPUT_1246PPUT_1245PPUT_1253PPUT_1243PPUT_1247PPUT_1249PPUT_1248PPUT_1251PPUT_1244PPUT_1252
PPUT160488 PP_1217PP_1216PP_1224PP_1214PP_1218PP_1220PP_1219PP_1222PP_1215PP_1223
PPRO298386 PBPRA1117PBPRA1116PBPRA2548PBPRA1113PBPRA2554PBPRA2552PBPRA2553PBPRA2550PBPRA1114PBPRA2549
PNAP365044 PNAP_0512PNAP_0510PNAP_2048PNAP_1728PNAP_2921PNAP_2570PNAP_2922PNAP_2050PNAP_3409PNAP_2049
PMUL272843 PM0976PM0977PM0980PM0971PM0969PM0970PM0967PM0978PM0966
PMEN399739 PMEN_1272PMEN_1271PMEN_1279PMEN_1269PMEN_1273PMEN_1275PMEN_1274PMEN_1277PMEN_1270PMEN_1278
PLUM243265 PLU2112PLU2111PLU1457PLU2109PLU1451PLU1453PLU1452PLU1455PLU2110PLU1456
PING357804 PING_0719PING_0718PING_0729PING_0723PING_0725PING_0724PING_0727PING_0716PING_0728
PFLU220664 PFL_4763PFL_4764PFL_4756PFL_4766PFL_4762PFL_4760PFL_4761PFL_4758PFL_4765PFL_4757
PFLU216595 PFLU4913PFLU4914PFLU4906PFLU4916PFLU4912PFLU4910PFLU4911PFLU4908PFLU4915PFLU4907
PFLU205922 PFL_4407PFL_4408PFL_4400PFL_4410PFL_4406PFL_4404PFL_4405PFL_4402PFL_4409PFL_4401
PENT384676 PSEEN4092PSEEN4093PSEEN4085PSEEN4095PSEEN4091PSEEN5452PSEEN4090PSEEN4087PSEEN4094PSEEN4086
PCRY335284 PCRYO_0685PCRYO_0684PCRYO_1479PCRYO_1191PCRYO_1135PCRYO_1136PCRYO_1133PCRYO_0671PCRYO_1509
PCAR338963 PCAR_2338PCAR_2337PCAR_0410PCAR_2335PCAR_1492PCAR_2977PCAR_2978PCAR_2975PCAR_2336PCAR_2974
PATL342610 PATL_2944PATL_2945PATL_2937PATL_2943PATL_2941PATL_2942PATL_2939PATL_2946PATL_2938
PARC259536 PSYC_0710PSYC_0709PSYC_0938PSYC_1200PSYC_1251PSYC_1250PSYC_1253PSYC_0699PSYC_0908
PAER208964 PA0967PA0966PA0974PA0964PA0968PA0970PA0969PA0972PA0965PA0973
PAER208963 PA14_51780PA14_51790PA14_51690PA14_51810PA14_51770PA14_51740PA14_51750PA14_51720PA14_51800PA14_51710
OCAR504832 OCAR_7299OCAR_7301OCAR_7288OCAR_7305OCAR_7297OCAR_7292OCAR_7293OCAR_7290OCAR_7302OCAR_7289
OANT439375 OANT_1213OANT_1212OANT_1221OANT_1200OANT_1214OANT_1216OANT_1215OANT_1218OANT_1211OANT_1220
NWIN323098 NWI_2724NWI_2725NWI_2713NWI_2729NWI_2723NWI_2719NWI_2720NWI_2717NWI_2726NWI_2714
NOCE323261 NOC_0140NOC_0139NOC_0147NOC_0137NOC_0141NOC_0143NOC_0142NOC_0145NOC_0138NOC_0146
NMUL323848 NMUL_A2719NMUL_A2720NMUL_A2712NMUL_A2722NMUL_A2718NMUL_A2716NMUL_A2717NMUL_A2714NMUL_A2721NMUL_A2713
NHAM323097 NHAM_3521NHAM_3522NHAM_3508NHAM_3525NHAM_3520NHAM_3514NHAM_3515NHAM_3512NHAM_3523NHAM_3509
NEUT335283 NEUT_0284NEUT_0283NEUT_0291NEUT_0281NEUT_0285NEUT_0287NEUT_0286NEUT_0289NEUT_0282NEUT_0290
NEUR228410 NE0213NE0212NE0220NE0210NE0214NE0216NE0215NE0218NE0211NE0219
NARO279238 SARO_0423SARO_0422SARO_0419SARO_1013SARO_1015SARO_1014SARO_1017SARO_0421SARO_0388
MXAN246197 MXAN_4969MXAN_4972MXAN_3000MXAN_4974MXAN_4456MXAN_5754MXAN_5753MXAN_5756MXAN_4973MXAN_4581
MSP409 M446_1104M446_0850M446_0281M446_6579M446_1106M446_0856M446_3390M446_3387M446_2328M446_0280
MSP266779 MESO_3176MESO_3178MESO_3169MESO_3192MESO_3175MESO_3173MESO_3174MESO_3171MESO_3179MESO_3170
MPET420662 MPE_A0327MPE_A3236MPE_A1348MPE_A1337MPE_A2953MPE_A2955MPE_A2954MPE_A1346MPE_A0482MPE_A1347
MMAG342108 AMB3216AMB3218AMB3208AMB3215AMB3213AMB3214AMB3211AMB3219AMB3210
MLOT266835 MLL3895MLL3898MLL3886MLL3945MLL3892MLL3890MLL3891MLL3888MLL3901MLL3887
MFLA265072 MFLA_2344MFLA_2353MFLA_2337MFLA_2355MFLA_2343MFLA_1558MFLA_2342MFLA_2339MFLA_2354MFLA_2338
MEXT419610 MEXT_4768MEXT_4842MEXT_0982MEXT_4765MEXT_1617MEXT_4763MEXT_4760MEXT_0962MEXT_4843
MCAP243233 MCA_1223MCA_1222MCA_1231MCA_1220MCA_1224MCA_1227MCA_1226MCA_1229MCA_1221MCA_1230
MAQU351348 MAQU_1704MAQU_1705MAQU_1697MAQU_1703MAQU_1701MAQU_1702MAQU_1699MAQU_1706MAQU_1698
LPNE400673 LPC_1000LPC_0713LPC_1528LPC_0711LPC_0999LPC_0997LPC_0998LPC_0995LPC_0712LPC_1529
LPNE297246 LPP1534LPP1251LPP2025LPP1249LPP1533LPP1531LPP1532LPP1529LPP1250LPP2026
LPNE297245 LPL1449LPL1251LPL2020LPL1249LPL1450LPL1452LPL1451LPL1454LPL1250LPL2021
LPNE272624 LPG1576LPG1288LPG2042LPG1286LPG1575LPG1573LPG1574LPG1571LPG1287LPG2043
LINT363253 LI1187LI0109LI0269LI0724LI0694LI0695LI0692LI0268LI0691
LCHO395495 LCHO_3954LCHO_3953LCHO_1942LCHO_1953LCHO_2940LCHO_0478LCHO_2941LCHO_1944LCHO_0531LCHO_3831
KPNE272620 GKPORF_B1537GKPORF_B1538GKPORF_B5175GKPORF_B1540GKPORF_B4735GKPORF_B5171GKPORF_B5170GKPORF_B5173GKPORF_B1539GKPORF_B5174
JSP375286 MMA_0311MMA_0310MMA_2469MMA_0544MMA_2463MMA_2465MMA_2464MMA_2467MMA_0309MMA_2468
JSP290400 JANN_0966JANN_0977JANN_3380JANN_0969JANN_0971JANN_0970JANN_0975JANN_0964JANN_0976
ILOI283942 IL1085IL1086IL1078IL1088IL1084IL1082IL1083IL1080IL1087IL1079
HSOM228400 HSM_0143HSM_0142HSM_1763HSM_0131HSM_0133HSM_0132HSM_0135HSM_1762HSM_0136
HSOM205914 HS_0270HS_0269HS_0508HS_0258HS_0260HS_0259HS_0262HS_0509HS_0263
HINF71421 HI_0312HI_0313HI_0315HI_0386HI_0384HI_0385HI_0382HI_0314HI_0381
HINF374930 CGSHIEE_01495CGSHIEE_01490CGSHIEE_01480CGSHIEE_01070CGSHIEE_01080CGSHIEE_01075CGSHIEE_01090CGSHIEE_01485CGSHIEE_01095
HINF281310 NTHI0430NTHI0431NTHI0433NTHI0506NTHI0504NTHI0505NTHI0502NTHI0432NTHI0501
HHAL349124 HHAL_2213HHAL_2212HHAL_2219HHAL_2210HHAL_2215HHAL_2214HHAL_2217HHAL_2211HHAL_2218
HDUC233412 HD_1757HD_1758HD_0596HD_1778HD_1776HD_1777HD_1773HD_0593HD_1772
HCHE349521 HCH_04922HCH_04923HCH_04913HCH_04926HCH_04920HCH_04917HCH_04919HCH_04915HCH_04924HCH_04914
HARS204773 HEAR0258HEAR0257HEAR2409HEAR0561HEAR2403HEAR2405HEAR2404HEAR2407HEAR0256HEAR2408
GURA351605 GURA_1413GURA_1414GURA_3692GURA_1416GURA_4320GURA_0205GURA_0206GURA_0203GURA_1415GURA_0202
GSUL243231 GSU_1077GSU_1076GSU_2552GSU_1074GSU_3461GSU_0027GSU_0028GSU_0025GSU_1075GSU_2305
GMET269799 GMET_0746GMET_0745GMET_3542GMET_0743GMET_3556GMET_3538GMET_3537GMET_3540GMET_0744GMET_3499
GBET391165 GBCGDNIH1_1101GBCGDNIH1_1099GBCGDNIH1_1097GBCGDNIH1_1102GBCGDNIH1_1104GBCGDNIH1_1103GBCGDNIH1_1106GBCGDNIH1_1098GBCGDNIH1_1107
ESP42895 ENT638_2429ENT638_2430ENT638_1240ENT638_2432ENT638_1234ENT638_1236ENT638_1235ENT638_1238ENT638_2431ENT638_1239
EFER585054 EFER_1212EFER_1211EFER_2362EFER_1208EFER_2368EFER_2366EFER_2367EFER_2364EFER_1209EFER_2363
ECOL83334 ECS2570ECS2571ECS0777ECS2574ECS0771ECS0773ECS0772ECS0775ECS2573ECS0776
ECOL585397 ECED1_2065ECED1_2066ECED1_0709ECED1_2069ECED1_0703ECED1_0705ECED1_0704ECED1_0707ECED1_2068ECED1_0708
ECOL585057 ECIAI39_1189ECIAI39_1188ECIAI39_0717ECIAI39_1185ECIAI39_0711ECIAI39_0713ECIAI39_0712ECIAI39_0715ECIAI39_1186ECIAI39_0716
ECOL585056 ECUMN_2158ECUMN_2159ECUMN_0830ECUMN_2162ECUMN_0824ECUMN_0826ECUMN_0825ECUMN_0828ECUMN_2161ECUMN_0829
ECOL585055 EC55989_2039EC55989_2040EC55989_0727EC55989_2043EC55989_0721EC55989_0723EC55989_0722EC55989_0725EC55989_2042EC55989_0726
ECOL585035 ECS88_1917ECS88_1918ECS88_0765ECS88_1922ECS88_0759ECS88_0761ECS88_0760ECS88_0763ECS88_1921ECS88_0764
ECOL585034 ECIAI1_1947ECIAI1_1948ECIAI1_0717ECIAI1_1951ECIAI1_0711ECIAI1_0713ECIAI1_0712ECIAI1_0715ECIAI1_1950ECIAI1_0716
ECOL481805 ECOLC_1772ECOLC_1771ECOLC_2913ECOLC_1768ECOLC_2919ECOLC_2917ECOLC_2918ECOLC_2915ECOLC_1769ECOLC_2914
ECOL469008 ECBD_1778ECBD_1777ECBD_2918ECBD_1774ECBD_2924ECBD_2922ECBD_2923ECBD_2920ECBD_1775ECBD_2919
ECOL439855 ECSMS35_1326ECSMS35_1325ECSMS35_0765ECSMS35_1322ECSMS35_0759ECSMS35_0761ECSMS35_0760ECSMS35_0763ECSMS35_1323ECSMS35_0764
ECOL413997 ECB_01831ECB_01832ECB_00702ECB_01835ECB_00696ECB_00698ECB_00697ECB_00700ECB_01834ECB_00701
ECOL409438 ECSE_2036ECSE_2037ECSE_0802ECSE_2040ECSE_0796ECSE_0798ECSE_0797ECSE_0800ECSE_2039ECSE_0801
ECOL405955 APECO1_910APECO1_911APECO1_1339APECO1_914APECO1_1345APECO1_1343APECO1_1344APECO1_1341APECO1_913APECO1_1340
ECOL364106 UTI89_C2064UTI89_C2065UTI89_C0739UTI89_C2068UTI89_C0732UTI89_C0734UTI89_C0733UTI89_C0736UTI89_C2067UTI89_C0738
ECOL362663 ECP_1804ECP_1805ECP_0753ECP_1808ECP_0747ECP_0749ECP_0748ECP_0751ECP_1807ECP_0752
ECOL331111 ECE24377A_2090ECE24377A_2091ECE24377A_0771ECE24377A_2094ECE24377A_0765ECE24377A_0767ECE24377A_0766ECE24377A_0769ECE24377A_2093ECE24377A_0770
ECOL316407 ECK1861:JW1849:B1860ECK1862:JW1850:B1861ECK0731:JW0732:B0742ECK1865:JW1853:B1864ECK0725:JW0726:B0736ECK0727:JW0728:B0738ECK0726:JW0727:B0737ECK0729:JW5100:B0740ECK1864:JW1852:B1863ECK0730:JW0731:B0741
ECOL199310 C2274C2275C0822C2278C0815C0817C0816C0819C2277C0821
ECAR218491 ECA2491ECA2492ECA1375ECA2494ECA1369ECA1371ECA1370ECA1373ECA2493ECA1374
DVUL882 DVU_2255DVU_2070DVU_2259DVU_0886DVU_2389DVU_3099DVU_3103DVU_2258DVU_3104
DSHI398580 DSHI_1105DSHI_1104DSHI_1113DSHI_2762DSHI_1107DSHI_1109DSHI_1108DSHI_1111DSHI_1103DSHI_1112
DDES207559 DDE_2322DDE_2323DDE_1580DDE_2325DDE_2735DDE_3630DDE_3629DDE_3632DDE_2324DDE_3633
DARO159087 DARO_4060DARO_4062DARO_4051DARO_4067DARO_4057DARO_4055DARO_4056DARO_4053DARO_4063DARO_4052
CVIO243365 CV_4215CV_4223CV_0111CV_3123CV_0107CV_0551CV_0109CV_4225CV_0110
CTEP194439 CT_0262CT_0640CT_1665CT_1264CT_0634CT_0633CT_0636CT_1664CT_0638
CSP78 CAUL_0786CAUL_0785CAUL_4425CAUL_0780CAUL_0787CAUL_0198CAUL_4430CAUL_4427CAUL_0784CAUL_4426
CSP501479 CSE45_0158CSE45_0159CSE45_1044CSE45_3738CSE45_3740CSE45_3739CSE45_3742CSE45_0160CSE45_3743
CSAL290398 CSAL_1848CSAL_1847CSAL_1855CSAL_1845CSAL_1849CSAL_1851CSAL_1850CSAL_1853CSAL_1846CSAL_1854
CPSY167879 CPS_2117CPS_2116CPS_1733CPS_1727CPS_1729CPS_1728CPS_1731CPS_2115CPS_1732
CJAP155077 CJA_1031CJA_1030CJA_1037CJA_1028CJA_1033CJA_1032CJA_1035CJA_1029CJA_1036
CBUR434922 COXBU7E912_0418COXBU7E912_0420COXBU7E912_2017COXBU7E912_0422COXBU7E912_0478COXBU7E912_0412COXBU7E912_0413COXBU7E912_2019COXBU7E912_0421COXBU7E912_2018
CBUR360115 COXBURSA331_A1756COXBURSA331_A1754COXBURSA331_A0177COXBURSA331_A1752COXBURSA331_A1689COXBURSA331_A1762COXBURSA331_A1761COXBURSA331_A0175COXBURSA331_A1753COXBURSA331_A0176
CBUR227377 CBU_1570CBU_1568CBU_0092CBU_1566CBU_1506CBU_1575CBU_1574CBU_0090CBU_1567CBU_0091
CAULO CC3236CC3228CC3243CC3234CC0322CC3233CC3230CC3238CC3229
BVIE269482 BCEP1808_0653BCEP1808_0654BCEP1808_0730BCEP1808_2379BCEP1808_0736BCEP1808_0734BCEP1808_0735BCEP1808_0732BCEP1808_0655BCEP1808_0731
BTHA271848 BTH_I1247BTH_I1248BTH_I1371BTH_I1015BTH_I1377BTH_I1375BTH_I1376BTH_I1373BTH_I1249BTH_I1372
BSUI470137 BSUIS_B1178BSUIS_B1179BSUIS_B1169BSUIS_B1192BSUIS_B1177BSUIS_B1174BSUIS_B1175BSUIS_B1172BSUIS_B1180BSUIS_B1170
BSUI204722 BR_1702BR_1703BR_1693BR_1717BR_1701BR_1699BR_1700BR_1697BR_1704BR_1695
BSP376 BRADO1147BRADO1145BRADO1178BRADO1143BRADO1149BRADO1171BRADO1170BRADO1173BRADO1144BRADO1176
BSP36773 BCEP18194_A3774BCEP18194_A3775BCEP18194_A3887BCEP18194_A5621BCEP18194_A3893BCEP18194_A3891BCEP18194_A3892BCEP18194_A3889BCEP18194_A3776BCEP18194_C6571
BPSE320373 BURPS668_3366BURPS668_3365BURPS668_3205BURPS668_1231BURPS668_3199BURPS668_3201BURPS668_3200BURPS668_3203BURPS668_3364BURPS668_3204
BPSE320372 BURPS1710B_A3683BURPS1710B_A3682BURPS1710B_A3527BURPS1710B_A1459BURPS1710B_A3521BURPS1710B_A3523BURPS1710B_A3522BURPS1710B_A3525BURPS1710B_A3681BURPS1710B_A3526
BPSE272560 BPSL2899BPSL2898BPSL2766BPSL1165BPSL2760BPSL2762BPSL2761BPSL2764BPSL2897BPSL2765
BPET94624 BPET0901BPET0904BPET0656BPET3099BPET0662BPET0660BPET0661BPET0658BPET0905BPET0657
BPER257313 BP3421BP3418BP3341BP2308BP3347BP3345BP3346BP3343BP3417BP3342
BPAR257311 BPP3571BPP3568BPP3794BPP2422BPP3788BPP3790BPP3789BPP3792BPP3567BPP3793
BOVI236 GBOORF1710GBOORF1711GBOORF1701GBOORF1726GBOORF1709GBOORF1706GBOORF1707GBOORF1704GBOORF1712GBOORF1703
BMEL359391 BAB1_1714BAB1_1715BAB1_1705BAB1_1729BAB1_1713BAB1_1711BAB1_1712BAB1_1709BAB1_1716BAB1_1707
BMEL224914 BMEI0334BMEI0333BMEI0341BMEI0321BMEI0335BMEI0337BMEI0336BMEI0339BMEI0332BMEI0340
BMAL320389 BMA10247_2532BMA10247_2533BMA10247_1951BMA10247_0358BMA10247_1945BMA10247_1947BMA10247_1946BMA10247_1949BMA10247_2534BMA10247_1950
BMAL320388 BMASAVP1_A0266BMASAVP1_A0267BMASAVP1_A0825BMASAVP1_A1075BMASAVP1_A0831BMASAVP1_A0829BMASAVP1_A0830BMASAVP1_A0827BMASAVP1_A0268BMASAVP1_A0826
BMAL243160 BMA_2353BMA_2354BMA_2083BMA_1884BMA_2077BMA_2079BMA_2078BMA_2081BMA_2355BMA_2082
BJAP224911 BLR1537BLR1536BLL7148BLR1534BLL7212BLL7154BLL7155BLL7152BLR1535BLL7149
BCEN331272 BCEN2424_0688BCEN2424_0689BCEN2424_0798BCEN2424_2294BCEN2424_0804BCEN2424_0802BCEN2424_0803BCEN2424_0800BCEN2424_0690BCEN2424_4417
BCEN331271 BCEN_0205BCEN_0206BCEN_0315BCEN_1682BCEN_0321BCEN_0319BCEN_0320BCEN_0317BCEN_0207BCEN_3949
BCAN483179 BCAN_A1741BCAN_A1742BCAN_A1733BCAN_A1755BCAN_A1740BCAN_A1738BCAN_A1739BCAN_A1736BCAN_A1743BCAN_A1734
BBRO257310 BB4006BB4003BB4239BB1871BB4233BB4235BB4234BB4237BB4002BB4238
BAMB398577 BAMMC406_0607BAMMC406_0608BAMMC406_0692BAMMC406_2210BAMMC406_0698BAMMC406_0696BAMMC406_0697BAMMC406_0694BAMMC406_0609BAMMC406_4309
BAMB339670 BAMB_0581BAMB_0582BAMB_0675BAMB_2332BAMB_0681BAMB_0679BAMB_0680BAMB_0677BAMB_0583BAMB_3849
BABO262698 BRUAB1_1687BRUAB1_1688BRUAB1_1678BRUAB1_1702BRUAB1_1686BRUAB1_1684BRUAB1_1685BRUAB1_1682BRUAB1_1689BRUAB1_1680
ASP76114 EBA3958EBA3959EBA2654EBA3674EBB84EBA2645EBA2644EBA2650EBA3657EBA2652
ASP62977 ACIAD2615ACIAD2614ACIAD1383ACIAD2052ACIAD2618ACIAD2620ACIAD2619ACIAD2622ACIAD2041ACIAD2623
ASP62928 AZO0601AZO0602AZO0415AZO0574AZO0421AZO0419AZO0420AZO0417AZO0571AZO0416
ASP232721 AJS_3694AJS_3700AJS_1725AJS_1898AJS_2770AJS_2772AJS_2771AJS_1723AJS_3658AJS_1724
ASAL382245 ASA_0736ASA_0735ASA_0747ASA_2843ASA_0741ASA_0743ASA_0742ASA_0745ASA_1283ASA_0746
APLE416269 APL_0284APL_0283APL_1151APL_0299APL_0301APL_0300APL_0303APL_1153APL_0304
AHYD196024 AHA_3647AHA_3648AHA_3636AHA_1522AHA_3642AHA_3640AHA_3641AHA_3638AHA_1301AHA_3637
AFER243159 AFE_2962AFE_2963AFE_2954AFE_2965AFE_2961AFE_2959AFE_2960AFE_2957AFE_2964AFE_2953
AEHR187272 MLG_2777MLG_2494MLG_0240MLG_2492MLG_0244MLG_0245MLG_0242MLG_2493MLG_0241
ACRY349163 ACRY_2904ACRY_2905ACRY_2907ACRY_2903ACRY_2901ACRY_2902ACRY_2899ACRY_2906ACRY_0363
ACAU438753 AZC_0519AZC_0515AZC_0526AZC_0510AZC_0520AZC_0522AZC_0521AZC_0524AZC_0513AZC_0525
ABOR393595 ABO_0753ABO_0752ABO_0760ABO_0750ABO_0754ABO_0756ABO_0755ABO_0758ABO_0751ABO_0759
ABAU360910 BAV2780BAV2778BAV2207BAV2911BAV2913BAV2912BAV2915BAV2777BAV2916
ABAC204669 ACID345_4544ACID345_4725ACID345_0590ACID345_2125ACID345_1409ACID345_4001ACID345_0595ACID345_0592ACID345_3618ACID345_0591
AAVE397945 AAVE_4237AAVE_4240AAVE_3404AAVE_3203AAVE_2228AAVE_2226AAVE_2227AAVE_3406AAVE_0833AAVE_3405


Organism features enriched in list (features available for 200 out of the 213 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00005711692
Disease:Brucellosis 0.004596255
Disease:Bubonic_plague 0.001550666
Disease:Gastroenteritis 0.0082239913
Endospores:No 2.343e-1432211
Endospores:Yes 1.795e-9153
GC_Content_Range4:0-40 8.844e-3213213
GC_Content_Range4:40-60 5.810e-7104224
GC_Content_Range4:60-100 3.093e-1183145
GC_Content_Range7:30-40 4.587e-2013166
GC_Content_Range7:50-60 4.892e-1268107
GC_Content_Range7:60-70 4.495e-1483134
Genome_Size_Range5:0-2 1.528e-265155
Genome_Size_Range5:2-4 0.000351650197
Genome_Size_Range5:4-6 5.407e-22115184
Genome_Size_Range5:6-10 0.00001183047
Genome_Size_Range9:1-2 3.891e-205128
Genome_Size_Range9:2-3 3.414e-621120
Genome_Size_Range9:4-5 6.383e-95896
Genome_Size_Range9:5-6 1.663e-105788
Genome_Size_Range9:6-8 1.592e-62738
Gram_Stain:Gram_Neg 3.664e-39184333
Habitat:Multiple 0.000069281178
Habitat:Specialized 0.0007043853
Motility:No 1.466e-1317151
Motility:Yes 3.081e-11129267
Optimal_temp.:25-30 6.209e-71719
Optimal_temp.:35-37 0.0082239913
Optimal_temp.:37 0.009392827106
Oxygen_Req:Anaerobic 2.724e-911102
Oxygen_Req:Facultative 4.055e-796201
Pathogenic_in:Animal 0.00824943166
Pathogenic_in:Plant 0.00175671115
Shape:Coccobacillus 0.0014271911
Shape:Coccus 9.683e-10682
Shape:Rod 1.641e-19168347
Shape:Spiral 0.0004020334
Temp._range:Mesophilic 0.0003189177473
Temp._range:Psychrophilic 0.008290979
Temp._range:Thermophilic 0.0000454235



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 109
Effective number of orgs (counting one per cluster within 468 clusters): 90

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSP84588 ncbi Synechococcus sp. WH 81021
SSP64471 ncbi Synechococcus sp. CC93111
SSOL273057 ncbi Sulfolobus solfataricus P21
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SMUT210007 ncbi Streptococcus mutans UA1591
SMAR399550 ncbi Staphylothermus marinus F10
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
PTOR263820 ncbi Picrophilus torridus DSM 97900
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S20
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MART243272 ncbi Mycoplasma arthritidis 158L3-11
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
LSPH444177 ncbi Lysinibacillus sphaericus C3-411
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BHER314723 ncbi Borrelia hermsii DAH1
BGAR290434 ncbi Borrelia garinii PBi1
BBUR224326 ncbi Borrelia burgdorferi B311
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040


Names of the homologs of the genes in the group in each of these orgs
  RUVB   RUVA   EG12854   EG11137   EG11110   EG11011   EG11010   EG11008   EG10925   EG10684   
WPIP80849 WB_1066
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TVOL273116
TPEN368408
TKOD69014
TACI273075
STOK273063
STHE322159 STER_1909
STHE299768 STR1936
STHE264199 STU1936
SSP84588 SYNW0715OR1945
SSP64471 GSYN1744
SSOL273057 SSO2295
SPYO370554 MGAS10750_SPY0037
SPYO370553 MGAS2096_SPY0037
SPYO370552 MGAS10270_SPY0037
SPYO370551 MGAS9429_SPY0036
SPYO319701 M28_SPY0035
SPYO293653 M5005_SPY0035
SPYO286636 M6_SPY0084
SPYO198466 SPYM3_0032
SPYO193567 SPS0033
SPYO186103 SPYM18_0039
SPYO160490 SPY0038
SMUT210007 SMU_64
SMAR399550
SAGA211110 GBS0049
SAGA208435 SAG_0049
SAGA205921 SAK_0082
SACI330779
RSAL288705 RSAL33209_2002
PTOR263820
PMAR93060 P9215_11891
PMAR74547 PMT1136
PMAR74546 PMT9312_1065
PMAR59920 PMN2A_0268
PMAR167555 NATL1_09371
PMAR167546 P9301ORF_1181
PMAR167542 P9515ORF_1196
PMAR167540 PMM1054
PMAR146891
PISL384616
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PABY272844
NSEN222891 NSE_0955
NPHA348780
MTHE349307 MTHE_0834
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748 MMOB1910
MMAZ192952 MM3087
MMAR444158
MMAR426368
MMAR402880
MMAR368407 MEMAR_0776
MMAR267377
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MGEN243273
MFLO265311
MCAP340047
MBUR259564 MBUR_0392
MBAR269797 MBAR_A1627
MART243272 MART0245
MAEO419665
MACE188937 MA1540
LSPH444177 BSPH_3938
LPLA220668 LP_2253
LMES203120 LEUM_1461
IHOS453591
HWAL362976 HQ2276A
HSP64091
HSAL478009
HMUK485914 HMUK_0148
HMAR272569 RRNAC2119
HBUT415426
CSUL444179
CMAQ397948
CKOR374847
BSP107806
BHER314723 BH0025
BGAR290434 BG0025
BBUR224326 BB_0025
BAPH372461
BAPH198804
BAFZ390236 BAPKO_0024
AYEL322098
AURANTIMONAS
APER272557
ALAI441768 ACL_1111
AFUL224325


Organism features enriched in list (features available for 103 out of the 109 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.009489059
Arrangment:Pairs 0.005044311112
Disease:Wide_range_of_infections 3.310e-91111
Endospores:No 3.458e-1674211
Endospores:Yes 0.0002483153
GC_Content_Range4:0-40 9.889e-1065213
GC_Content_Range4:60-100 2.259e-77145
GC_Content_Range7:0-30 9.996e-72247
GC_Content_Range7:30-40 0.000544343166
GC_Content_Range7:60-70 1.874e-67134
Genome_Size_Range5:0-2 5.219e-2673155
Genome_Size_Range5:2-4 0.007021025197
Genome_Size_Range5:4-6 6.076e-135184
Genome_Size_Range9:0-1 2.860e-122127
Genome_Size_Range9:1-2 6.372e-1352128
Genome_Size_Range9:3-4 0.0005077477
Genome_Size_Range9:4-5 0.0000183496
Genome_Size_Range9:5-6 1.753e-7188
Gram_Stain:Gram_Neg 4.169e-1326333
Habitat:Aquatic 0.00001793191
Habitat:Multiple 1.940e-107178
Habitat:Specialized 0.00004372153
Motility:No 8.384e-747151
Motility:Yes 0.004434736267
Optimal_temp.:- 0.006485535257
Optimal_temp.:100 0.005382633
Optimal_temp.:35-40 0.005382633
Optimal_temp.:85 0.000928044
Oxygen_Req:Aerobic 2.626e-614185
Oxygen_Req:Anaerobic 0.000214331102
Pathogenic_in:Animal 0.0001477266
Pathogenic_in:Human 0.002684426213
Pathogenic_in:No 0.007361850226
Salinity:Extreme_halophilic 0.002297357
Salinity:Non-halophilic 0.004394328106
Shape:Coccus 9.200e-83382
Shape:Irregular_coccus 2.035e-101517
Shape:Pleomorphic 0.005083858
Shape:Rod 1.930e-2713347
Shape:Sphere 1.907e-101619
Temp._range:Hyperthermophilic 1.862e-91723
Temp._range:Mesophilic 0.000065869473
Temp._range:Thermophilic 0.00751641235



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 58
Effective number of orgs (counting one per cluster within 468 clusters): 43

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CBUR360115 ncbi Coxiella burnetii RSA 331 0.000087899710
CBUR227377 ncbi Coxiella burnetii RSA 493 0.0001010101110
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-00 0.00012546909
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-111 0.0001521105310
XFAS405440 ncbi Xylella fastidiosa M12 0.0004650117710
NWIN323098 ncbi Nitrobacter winogradskyi Nb-255 0.0004690117810
SACI56780 ncbi Syntrophus aciditrophicus SB 0.0004770118010
XFAS183190 ncbi Xylella fastidiosa Temecula1 0.0005148118910
XFAS160492 ncbi Xylella fastidiosa 9a5c 0.0006450121610
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1 0.0006888122410
CTEP194439 ncbi Chlorobium tepidum TLS 0.00097358699
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 23270 0.0012512129910
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G20 0.0012805130210
NEUR228410 ncbi Nitrosomonas europaea ATCC 19718 0.0012904130310
NEUT335283 ncbi Nitrosomonas eutropha C91 0.0013513130910
RAKA293614 ncbi Rickettsia akari Hartford 0.00169344167
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith 0.00169344167
NHAM323097 ncbi Nitrobacter hamburgensis X14 0.0016963133910
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 1 0.0016963133910
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB 0.0018142134810
LPNE297245 ncbi Legionella pneumophila Lens 0.0018829135310
RRIC452659 ncbi Rickettsia rickettsii Iowa 0.00192854247
LPNE400673 ncbi Legionella pneumophila Corby 0.0019539135810
LPNE297246 ncbi Legionella pneumophila Paris 0.0020124136210
RCON272944 ncbi Rickettsia conorii Malish 7 0.00215634317
NOCE323261 ncbi Nitrosococcus oceani ATCC 19707 0.0021656137210
NMUL323848 ncbi Nitrosospira multiformis ATCC 25196 0.0022791137910
RMAS416276 ncbi Rickettsia massiliae MTU5 0.00252104417
OCAR504832 ncbi Oligotropha carboxidovorans OM5 0.0028082140810
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin345 0.0033039143110
RBEL391896 ncbi Rickettsia bellii OSU 85-389 0.00351044637
BOVI236 Brucella ovis 0.0041245146310
BQUI283165 ncbi Bartonella quintana Toulouse 0.00441757178
BBAC360095 ncbi Bartonella bacilliformis KC583 0.00446557188
RFEL315456 ncbi Rickettsia felis URRWXCal2 0.00448394807
PCAR338963 ncbi Pelobacter carbinolicus DSM 2380 0.0046945148210
RBEL336407 ncbi Rickettsia bellii RML369-C 0.00474354847
DSHI398580 ncbi Dinoroseobacter shibae DFL 12 0.0049217148910
MFLA265072 ncbi Methylobacillus flagellatus KT 0.0053701150210
TDEN292415 ncbi Thiobacillus denitrificans ATCC 25259 0.0055152150610
MCAP243233 ncbi Methylococcus capsulatus Bath 0.0056264150910
GMET269799 ncbi Geobacter metallireducens GS-15 0.0057778151310
BMEL359391 ncbi Brucella melitensis biovar Abortus 2308 0.0060516152010
BABO262698 ncbi Brucella abortus bv. 1 str. 9-941 0.0060916152110
GSUL243231 ncbi Geobacter sulfurreducens PCA 0.0061725152310
RPAL316057 ncbi Rhodopseudomonas palustris BisB5 0.0064207152910
MXAN246197 ncbi Myxococcus xanthus DK 1622 0.0070354154310
GURA351605 ncbi Geobacter uraniireducens Rf4 0.0072204154710
BSUI470137 ncbi Brucella suis ATCC 23445 0.0072204154710
BCAN483179 ncbi Brucella canis ATCC 23365 0.0083722157010
BSUI204722 ncbi Brucella suis 1330 0.0086987157610
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M 0.0087542157710
RPAL316058 ncbi Rhodopseudomonas palustris HaA2 0.0087542157710
BHEN283166 ncbi Bartonella henselae Houston-1 0.00881857848
RPAL316055 ncbi Rhodopseudomonas palustris BisA53 0.0092099158510
ABOR393595 ncbi Alcanivorax borkumensis SK2 0.0095055159010
BTRI382640 ncbi Bartonella tribocorum CIP 105476 0.00953747928
CCHL340177 ncbi Chlorobium chlorochromatii CaD3 0.00981977958


Names of the homologs of the genes in the group in each of these orgs
  RUVB   RUVA   EG12854   EG11137   EG11110   EG11011   EG11010   EG11008   EG10925   EG10684   
CBUR360115 COXBURSA331_A1756COXBURSA331_A1754COXBURSA331_A0177COXBURSA331_A1752COXBURSA331_A1689COXBURSA331_A1762COXBURSA331_A1761COXBURSA331_A0175COXBURSA331_A1753COXBURSA331_A0176
CBUR227377 CBU_1570CBU_1568CBU_0092CBU_1566CBU_1506CBU_1575CBU_1574CBU_0090CBU_1567CBU_0091
LINT363253 LI1187LI0109LI0269LI0724LI0694LI0695LI0692LI0268LI0691
CBUR434922 COXBU7E912_0418COXBU7E912_0420COXBU7E912_2017COXBU7E912_0422COXBU7E912_0478COXBU7E912_0412COXBU7E912_0413COXBU7E912_2019COXBU7E912_0421COXBU7E912_2018
XFAS405440 XFASM12_1063XFASM12_1061XFASM12_1070XFASM12_1059XFASM12_1064XFASM12_1066XFASM12_1065XFASM12_1068XFASM12_1060XFASM12_1069
NWIN323098 NWI_2724NWI_2725NWI_2713NWI_2729NWI_2723NWI_2719NWI_2720NWI_2717NWI_2726NWI_2714
SACI56780 SYN_02971SYN_02972SYN_00190SYN_02974SYN_00892SYN_00186SYN_00185SYN_00188SYN_02973SYN_00189
XFAS183190 PD_0889PD_0887PD_0896PD_0885PD_0890PD_0892PD_0891PD_0894PD_0886PD_0895
XFAS160492 XF1902XF1904XF1895XF1906XF1901XF1899XF1900XF1897XF1905XF1896
PSP312153 PNUC_1880PNUC_1879PNUC_0273PNUC_0618PNUC_1340PNUC_0277PNUC_0278PNUC_0275PNUC_1878PNUC_0274
CTEP194439 CT_0262CT_0640CT_1665CT_1264CT_0634CT_0633CT_0636CT_1664CT_0638
AFER243159 AFE_2962AFE_2963AFE_2954AFE_2965AFE_2961AFE_2959AFE_2960AFE_2957AFE_2964AFE_2953
DDES207559 DDE_2322DDE_2323DDE_1580DDE_2325DDE_2735DDE_3630DDE_3629DDE_3632DDE_2324DDE_3633
NEUR228410 NE0213NE0212NE0220NE0210NE0214NE0216NE0215NE0218NE0211NE0219
NEUT335283 NEUT_0284NEUT_0283NEUT_0291NEUT_0281NEUT_0285NEUT_0287NEUT_0286NEUT_0289NEUT_0282NEUT_0290
RAKA293614 A1C_01700A1C_04175A1C_02315A1C_02310A1C_02265A1C_00880A1C_06010
RRIC392021 A1G_01780A1G_04400A1G_02405A1G_02400A1G_02315A1G_00915A1G_06560
NHAM323097 NHAM_3521NHAM_3522NHAM_3508NHAM_3525NHAM_3520NHAM_3514NHAM_3515NHAM_3512NHAM_3523NHAM_3509
LPNE272624 LPG1576LPG1288LPG2042LPG1286LPG1575LPG1573LPG1574LPG1571LPG1287LPG2043
SFUM335543 SFUM_0993SFUM_0994SFUM_0757SFUM_0996SFUM_1216SFUM_0753SFUM_0752SFUM_0755SFUM_0995SFUM_0756
LPNE297245 LPL1449LPL1251LPL2020LPL1249LPL1450LPL1452LPL1451LPL1454LPL1250LPL2021
RRIC452659 RRIOWA_0377RRIOWA_0924RRIOWA_0505RRIOWA_0504RRIOWA_0487RRIOWA_0199RRIOWA_1405
LPNE400673 LPC_1000LPC_0713LPC_1528LPC_0711LPC_0999LPC_0997LPC_0998LPC_0995LPC_0712LPC_1529
LPNE297246 LPP1534LPP1251LPP2025LPP1249LPP1533LPP1531LPP1532LPP1529LPP1250LPP2026
RCON272944 RC0312RC0681RC0423RC0422RC0406RC0159RC1200
NOCE323261 NOC_0140NOC_0139NOC_0147NOC_0137NOC_0141NOC_0143NOC_0142NOC_0145NOC_0138NOC_0146
NMUL323848 NMUL_A2719NMUL_A2720NMUL_A2712NMUL_A2722NMUL_A2718NMUL_A2716NMUL_A2717NMUL_A2714NMUL_A2721NMUL_A2713
RMAS416276 RMA_0318RMA_0775RMA_0433RMA_0432RMA_0416RMA_0166RMA_1215
OCAR504832 OCAR_7299OCAR_7301OCAR_7288OCAR_7305OCAR_7297OCAR_7292OCAR_7293OCAR_7290OCAR_7302OCAR_7289
ABAC204669 ACID345_4544ACID345_4725ACID345_0590ACID345_2125ACID345_1409ACID345_4001ACID345_0595ACID345_0592ACID345_3618ACID345_0591
RBEL391896 A1I_06620A1I_03240A1I_06465A1I_06470A1I_06455A1I_01390A1I_07275
BOVI236 GBOORF1710GBOORF1711GBOORF1701GBOORF1726GBOORF1709GBOORF1706GBOORF1707GBOORF1704GBOORF1712GBOORF1703
BQUI283165 BQ11870BQ11790BQ11860BQ11840BQ11850BQ11820BQ11890BQ11770
BBAC360095 BARBAKC583_0149BARBAKC583_0163BARBAKC583_0148BARBAKC583_0146BARBAKC583_0147BARBAKC583_0144BARBAKC583_0151BARBAKC583_0165
RFEL315456 RF_0991RF_0799RF_0505RF_0504RF_0492RF_1173RF_1234
PCAR338963 PCAR_2338PCAR_2337PCAR_0410PCAR_2335PCAR_1492PCAR_2977PCAR_2978PCAR_2975PCAR_2336PCAR_2974
RBEL336407 RBE_0227RBE_0568RBE_0266RBE_0265RBE_0268RBE_1178RBE_0129
DSHI398580 DSHI_1105DSHI_1104DSHI_1113DSHI_2762DSHI_1107DSHI_1109DSHI_1108DSHI_1111DSHI_1103DSHI_1112
MFLA265072 MFLA_2344MFLA_2353MFLA_2337MFLA_2355MFLA_2343MFLA_1558MFLA_2342MFLA_2339MFLA_2354MFLA_2338
TDEN292415 TBD_2211TBD_2213TBD_2204TBD_2215TBD_2210TBD_2208TBD_2209TBD_2206TBD_2214TBD_2205
MCAP243233 MCA_1223MCA_1222MCA_1231MCA_1220MCA_1224MCA_1227MCA_1226MCA_1229MCA_1221MCA_1230
GMET269799 GMET_0746GMET_0745GMET_3542GMET_0743GMET_3556GMET_3538GMET_3537GMET_3540GMET_0744GMET_3499
BMEL359391 BAB1_1714BAB1_1715BAB1_1705BAB1_1729BAB1_1713BAB1_1711BAB1_1712BAB1_1709BAB1_1716BAB1_1707
BABO262698 BRUAB1_1687BRUAB1_1688BRUAB1_1678BRUAB1_1702BRUAB1_1686BRUAB1_1684BRUAB1_1685BRUAB1_1682BRUAB1_1689BRUAB1_1680
GSUL243231 GSU_1077GSU_1076GSU_2552GSU_1074GSU_3461GSU_0027GSU_0028GSU_0025GSU_1075GSU_2305
RPAL316057 RPD_4167RPD_4169RPD_4143RPD_4171RPD_4165RPD_4149RPD_4150RPD_4147RPD_4170RPD_4144
MXAN246197 MXAN_4969MXAN_4972MXAN_3000MXAN_4974MXAN_4456MXAN_5754MXAN_5753MXAN_5756MXAN_4973MXAN_4581
GURA351605 GURA_1413GURA_1414GURA_3692GURA_1416GURA_4320GURA_0205GURA_0206GURA_0203GURA_1415GURA_0202
BSUI470137 BSUIS_B1178BSUIS_B1179BSUIS_B1169BSUIS_B1192BSUIS_B1177BSUIS_B1174BSUIS_B1175BSUIS_B1172BSUIS_B1180BSUIS_B1170
BCAN483179 BCAN_A1741BCAN_A1742BCAN_A1733BCAN_A1755BCAN_A1740BCAN_A1738BCAN_A1739BCAN_A1736BCAN_A1743BCAN_A1734
BSUI204722 BR_1702BR_1703BR_1693BR_1717BR_1701BR_1699BR_1700BR_1697BR_1704BR_1695
BMEL224914 BMEI0334BMEI0333BMEI0341BMEI0321BMEI0335BMEI0337BMEI0336BMEI0339BMEI0332BMEI0340
RPAL316058 RPB_4269RPB_4271RPB_1816RPB_4273RPB_4268RPB_1810RPB_1809RPB_1812RPB_4272RPB_1815
BHEN283166 BH14890BH14810BH14880BH14860BH14870BH14840BH14910BH14790
RPAL316055 RPE_4767RPE_4769RPE_4701RPE_4771RPE_4763RPE_4709RPE_4710RPE_4707RPE_4770RPE_4702
ABOR393595 ABO_0753ABO_0752ABO_0760ABO_0750ABO_0754ABO_0756ABO_0755ABO_0758ABO_0751ABO_0759
BTRI382640 BT_2375BT_2363BT_2374BT_2371BT_2372BT_2368BT_2377BT_2361
CCHL340177 CAG_0457CAG_1912CAG_0165CAG_1908CAG_1907CAG_1910CAG_0164CAG_1039


Organism features enriched in list (features available for 57 out of the 58 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Groups 0.009407422
Disease:Bacillary_angiomatosis 0.009407422
Disease:Brucellosis 7.590e-655
Disease:Citrus_variegated_chlorosis 0.009407422
Disease:Legionnaire's_disease 0.000082944
Disease:Q_fever 0.009407422
Disease:Rocky_Mountain_Spotted_Fever 0.000890533
Disease:fever 0.009407422
Endospores:No 0.00007248211
GC_Content_Range7:50-60 0.000024823107
Genome_Size_Range5:2-4 4.781e-635197
Genome_Size_Range5:4-6 0.00253739184
Genome_Size_Range9:3-4 4.908e-62077
Gram_Stain:Gram_Neg 3.579e-1053333
Motility:No 0.00053665151
Optimal_temp.:26-28 0.009407422
Oxygen_Req:Aerobic 0.000757629185
Oxygen_Req:Facultative 0.008904512201
Salinity:Non-halophilic 0.00008031106
Shape:Coccobacillus 0.0000138711



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951660.7249
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002060.7005
GLYCOCAT-PWY (glycogen degradation I)2461850.6985
PWY-5918 (heme biosynthesis I)2721920.6755
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181690.6702
PWY-1269 (CMP-KDO biosynthesis I)3252090.6631
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491340.6589
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861940.6534
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251680.6416
TYRFUMCAT-PWY (tyrosine degradation I)1841490.6386
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911930.6342
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961940.6288
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482100.6203
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901900.6163
PWY-4041 (γ-glutamyl cycle)2791830.5962
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831410.5827
PWY-5913 (TCA cycle variation IV)3011880.5762
PWY-5028 (histidine degradation II)1301120.5626
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391980.5578
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911410.5556
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561240.5519
PWY-5148 (acyl-CoA hydrolysis)2271560.5512
AST-PWY (arginine degradation II (AST pathway))1201040.5404
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761320.5399
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911380.5335
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551640.5287
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291890.5187
P344-PWY (acrylonitrile degradation)2101430.5097
REDCITCYC (TCA cycle variation II)1741270.5092
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351060.4915
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001750.4905
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))1381070.4875
PWY-6087 (4-chlorocatechol degradation)2231450.4853
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491550.4827
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491550.4827
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982040.4785
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222100.4757
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162080.4725
PWY-46 (putrescine biosynthesis III)1381050.4712
GALACTARDEG-PWY (D-galactarate degradation I)1511110.4689
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112910.4645
PWY-5084 (2-ketoglutarate dehydrogenase complex)3261800.4644
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96820.4609
PWY-5386 (methylglyoxal degradation I)3051720.4584
P601-PWY (D-camphor degradation)95810.4567
DAPLYSINESYN-PWY (lysine biosynthesis I)3421840.4561
VALDEG-PWY (valine degradation I)2901660.4535
PWY-3162 (tryptophan degradation V (side chain pathway))94800.4525
PWY-6193 (3-chlorocatechol degradation II (ortho))1941280.4507
GALACTCAT-PWY (D-galactonate degradation)104850.4487
GLUCONSUPER-PWY (D-gluconate degradation)2291420.4471
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111720.4445
PWY-1501 (mandelate degradation I)73670.4423
GLUCARDEG-PWY (D-glucarate degradation I)1521080.4415
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3651890.4411
PWY-5340 (sulfate activation for sulfonation)3851940.4344
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation)2121330.4322
GALACTITOLCAT-PWY (galactitol degradation)73660.4318
PWY-2361 (3-oxoadipate degradation)82710.4300
PWY-5188 (tetrapyrrole biosynthesis I)4392080.4295
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891620.4288
PWY0-862 (cis-dodecenoyl biosynthesis)3431800.4267
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)135980.4258
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3741890.4223
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81690.4156
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94760.4147
PWY0-501 (lipoate biosynthesis and incorporation I)3851910.4135
PWY0-1337 (oleate β-oxidation)1991250.4134
PWY-81 (toluene degradation to benzoyl-CoA (anaerobic))67600.4052
PWY-6268 (adenosylcobalamin salvage from cobalamin)3171680.4036
PWY0-981 (taurine degradation IV)106810.4031



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  RUVA   EG12854   EG11137   EG11110   EG11011   EG11010   EG11008   EG10925   EG10684   
RUVB0.9999870.9993280.9998120.9996650.9995980.9996630.9995440.999940.999498
RUVA0.9992180.9998190.9994380.9994340.9994960.9993480.9999620.999313
EG128540.9988090.9996560.9997660.9997710.9998810.9992230.999916
EG111370.999150.9990630.9991360.9991240.9999270.999115
EG111100.9998630.9999190.9997950.9994730.999741
EG110110.9999740.9999370.999460.999865
EG110100.999930.9995120.999854
EG110080.999390.999969
EG109250.999314
EG10684



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PAIRWISE BLAST SCORES:

  RUVB   RUVA   EG12854   EG11137   EG11110   EG11011   EG11010   EG11008   EG10925   EG10684   
RUVB0.0f0---------
RUVA-0.0f0--------
EG12854--0.0f0-------
EG11137---0.0f0------
EG11110----0.0f0-----
EG11011-----0.0f0----
EG11010------0.0f0---
EG11008-------0.0f0--
EG10925--------0.0f0-
EG10684---------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-2201 (The Tol-Pal Cell Envelope Complex) (degree of match pw to cand: 0.833, degree of match cand to pw: 0.500, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9991 EG10684 (pal) EG10684-MONOMER (Pal)
   *in cand* 0.9996 0.9988 EG12854 (ybgF) EG12854-MONOMER (predicted periplasmic protein)
   *in cand* 0.9997 0.9991 EG11008 (tolB) EG11008-MONOMER (TolB)
   *in cand* 0.9997 0.9991 EG11011 (tolR) EG11011-MONOMER (TolR)
   *in cand* 0.9997 0.9991 EG11010 (tolQ) EG11010-MONOMER (TolQ)
             0.9852 0.8849 EG11007 (tolA) EG11007-MONOMER (TolA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9992 EG10925 (ruvC) EG10925-MONOMER (Holliday junction nuclease; resolution of structures; repair)
   *in cand* 0.9997 0.9991 EG11110 (ybgC) EG11110-MONOMER (esterase/thioesterase)
   *in cand* 0.9994 0.9988 EG11137 (yebC) EG11137-MONOMER (conserved protein)
   *in cand* 0.9996 0.9992 RUVA (ruvA) EG10923-MONOMER (branch migration of Holliday structures; repair)
   *in cand* 0.9997 0.9993 RUVB (ruvB) EG10924-MONOMER (branch migration of Holliday structures; repair helicase)

- CPLX0-2202 (Colicin S4 Transport System) (degree of match pw to cand: 0.714, degree of match cand to pw: 0.500, average score: 0.867)
  Genes in pathway or complex:
             0.6503 0.4097 EG11124 (ompW) EG11124-MONOMER (OmpW, outer membrane protein)
             0.9852 0.8849 EG11007 (tolA) EG11007-MONOMER (TolA)
   *in cand* 0.9997 0.9991 EG11010 (tolQ) EG11010-MONOMER (TolQ)
   *in cand* 0.9997 0.9991 EG11011 (tolR) EG11011-MONOMER (TolR)
   *in cand* 0.9997 0.9991 EG11008 (tolB) EG11008-MONOMER (TolB)
   *in cand* 0.9996 0.9988 EG12854 (ybgF) EG12854-MONOMER (predicted periplasmic protein)
   *in cand* 0.9997 0.9991 EG10684 (pal) EG10684-MONOMER (Pal)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9992 EG10925 (ruvC) EG10925-MONOMER (Holliday junction nuclease; resolution of structures; repair)
   *in cand* 0.9997 0.9991 EG11110 (ybgC) EG11110-MONOMER (esterase/thioesterase)
   *in cand* 0.9994 0.9988 EG11137 (yebC) EG11137-MONOMER (conserved protein)
   *in cand* 0.9996 0.9992 RUVA (ruvA) EG10923-MONOMER (branch migration of Holliday structures; repair)
   *in cand* 0.9997 0.9993 RUVB (ruvB) EG10924-MONOMER (branch migration of Holliday structures; repair helicase)

- RUVABC-CPLX (resolvasome) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.300, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9992 RUVA (ruvA) EG10923-MONOMER (branch migration of Holliday structures; repair)
   *in cand* 0.9997 0.9993 RUVB (ruvB) EG10924-MONOMER (branch migration of Holliday structures; repair helicase)
   *in cand* 0.9996 0.9992 EG10925 (ruvC) EG10925-MONOMER (Holliday junction nuclease; resolution of structures; repair)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9991 EG10684 (pal) EG10684-MONOMER (Pal)
   *in cand* 0.9997 0.9991 EG11008 (tolB) EG11008-MONOMER (TolB)
   *in cand* 0.9997 0.9991 EG11010 (tolQ) EG11010-MONOMER (TolQ)
   *in cand* 0.9997 0.9991 EG11011 (tolR) EG11011-MONOMER (TolR)
   *in cand* 0.9997 0.9991 EG11110 (ybgC) EG11110-MONOMER (esterase/thioesterase)
   *in cand* 0.9994 0.9988 EG11137 (yebC) EG11137-MONOMER (conserved protein)
   *in cand* 0.9996 0.9988 EG12854 (ybgF) EG12854-MONOMER (predicted periplasmic protein)

- CPLX0-2221 (The Colicin A Import System) (degree of match pw to cand: 0.625, degree of match cand to pw: 0.500, average score: 0.867)
  Genes in pathway or complex:
             0.9852 0.8849 EG11007 (tolA) EG11007-MONOMER (TolA)
   *in cand* 0.9997 0.9991 EG11010 (tolQ) EG11010-MONOMER (TolQ)
   *in cand* 0.9997 0.9991 EG11011 (tolR) EG11011-MONOMER (TolR)
   *in cand* 0.9997 0.9991 EG11008 (tolB) EG11008-MONOMER (TolB)
   *in cand* 0.9996 0.9988 EG12854 (ybgF) EG12854-MONOMER (predicted periplasmic protein)
   *in cand* 0.9997 0.9991 EG10684 (pal) EG10684-MONOMER (Pal)
             0.7841 0.7204 EG10671 (ompF) EG10671-MONOMER (OmpF)
             0.7420 0.5406 EG10126 (btuB) EG10126-MONOMER (outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9992 EG10925 (ruvC) EG10925-MONOMER (Holliday junction nuclease; resolution of structures; repair)
   *in cand* 0.9997 0.9991 EG11110 (ybgC) EG11110-MONOMER (esterase/thioesterase)
   *in cand* 0.9994 0.9988 EG11137 (yebC) EG11137-MONOMER (conserved protein)
   *in cand* 0.9996 0.9992 RUVA (ruvA) EG10923-MONOMER (branch migration of Holliday structures; repair)
   *in cand* 0.9997 0.9993 RUVB (ruvB) EG10924-MONOMER (branch migration of Holliday structures; repair helicase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10925 EG11137 RUVA RUVB (centered at EG10925)
EG10684 EG11008 EG11010 EG11011 EG11110 EG12854 (centered at EG11008)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  RUVB   RUVA   EG12854   EG11137   EG11110   EG11011   EG11010   EG11008   EG10925   EG10684   
415/623411/623226/623417/623316/623284/623277/623336/623425/623313/623
AAEO224324:0:Tyes--0233182-----
AAUR290340:2:Tyes---1----0-
AAVE397945:0:Tyes3346334925302334137513731374253202531
ABAC204669:0:Tyes399041750154782434365230491
ABAU360910:0:Tyes575573-0707709708711572712
ABOR393595:0:Tyes32100465819
ABUT367737:0:Tyes-213--0---1801-
ACAU438753:0:Tyes9516010121114315
ACEL351607:0:Tyes01-3----2-
ACRY349163:8:Tyes25532554-2556255225502551254825550
ADEH290397:0:Tyes-294--9922302932700
AEHR187272:0:Tyes2522223902237-45222381
AFER243159:0:Tyes9101128674110
AHYD196024:0:Tyes226222632251218225722552256225302252
ALAI441768:0:Tyes----0-----
AMAR234826:0:Tyes---334--690771440
AMAR329726:7:Tyes-------0--
AMAR329726:9:Tyes28821024-0----3381-
AMET293826:0:Tyes101100-01762---99-
ANAE240017:0:Tyes-0-2------
AORE350688:0:Tyes01-54----2-
APHA212042:0:Tyes---436--8739620300
APLE416269:0:Tyes10-8661214131686817
APLE434271:0:Tno0--8541719182185622
ASAL382245:5:Tyes101220256871052711
ASP1667:3:Tyes---1----0-
ASP232721:2:Tyes191519212167101610181017018791
ASP62928:0:Tyes187188016064521571
ASP62977:0:Tyes11371136062811391141114011436201144
ASP76114:2:Tyes767768659302145855
AVAR240292:3:Tyes8992717-112130364475--0-
BABO262698:1:Tno9100248674112
BAFZ390236:2:Fyes---0------
BAMB339670:2:Tno---------0
BAMB339670:3:Tno0195179910199100972-
BAMB398577:2:Tno---------0
BAMB398577:3:Tno01851628918990872-
BAMY326423:0:Tyes698699--0--1148--
BANT260799:0:Tno905906--0-----
BANT261594:2:Tno932933--0-----
BANT568206:2:Tyes36353636--0-----
BANT592021:2:Tno958959--0-----
BBAC264462:0:Tyes-21282117-16022302129413
BBAC360095:0:Tyes5--194230721
BBRO257310:0:Tyes2150214723920238623882387239021462391
BBUR224326:21:Fno---0------
BCAN483179:1:Tno890227563101
BCEN331271:1:Tno---------0
BCEN331271:2:Tno0110914991151131141112-
BCEN331272:2:Tyes---------0
BCEN331272:3:Tyes0111016041161141151122-
BCER226900:1:Tyes789790--0-----
BCER288681:0:Tno846847--0-----
BCER315749:1:Tyes856857--0-----
BCER405917:1:Tyes848849--0-----
BCER572264:1:Tno814815--0-----
BCIC186490:0:Tyes1891901-----1910
BCLA66692:0:Tyes10--------
BFRA272559:1:Tyes032693993----35342891-
BFRA295405:0:Tno035744327----38683139-
BGAR290434:2:Fyes---0------
BHAL272558:0:Tyes-0--1068-----
BHEN283166:0:Tyes9--28674110
BHER314723:0:Fyes---0------
BJAP224911:0:Fyes3256450570956515652564915646
BLIC279010:0:Tyes825826-8350--1312--
BLON206672:0:Tyes-2-0----1-
BMAL243160:1:Tno4304311820176178177180432181
BMAL320388:1:Tno015507965565545555522551
BMAL320389:1:Tyes2124212515550154915511550155321261554
BMEL224914:1:Tno1312200141615181119
BMEL359391:1:Tno9100248674112
BOVI236:1:Tyes9100238563112
BPAR257311:0:Tno1086108313100130413061305130810821309
BPER257313:0:Tyes1022101994809549529539501018949
BPET94624:0:Tyes2522550246264522561
BPSE272560:1:Tyes1749174816160161016121611161417471615
BPSE320372:1:Tno2103210219490194319451944194721011948
BPSE320373:1:Tno2048204718880188218841883188620461887
BPUM315750:0:Tyes700701--0-----
BQUI283165:0:Tyes8--27563100
BSP36773:0:Tyes---------0
BSP36773:2:Tyes0111218851181161171142-
BSP376:0:Tyes423506282730133
BSUB:0:Tyes01-9---487--
BSUI204722:1:Tyes9100248674112
BSUI470137:0:Tno9100238563111
BTHA271848:1:Tno2252263480354352353350227349
BTHE226186:0:Tyes276114282289----01107-
BTHU281309:1:Tno785786--0-----
BTHU412694:1:Tno727728--0-----
BTRI382640:1:Tyes11--210896130
BTUR314724:0:Fyes---1----0-
BVIE269482:7:Tyes0177171383818279278
BWEI315730:4:Tyes959960--0-----
BXEN266265:0:Tyes-----0140---
CABO218497:0:Tyes-1-----8120813
CACE272562:1:Tyes2012--20220-----
CAULO:0:Tyes2958-29502965295602955295229602951
CBEI290402:0:Tyes10-2628------
CBLO203907:0:Tyes--5--103-4
CBLO291272:0:Tno--5--103-4
CBOT36826:1:Tno18891890-18920-----
CBOT441770:0:Tyes18741875-18770-----
CBOT441771:0:Tno17321733-17350-----
CBOT441772:1:Tno18451846-18480-----
CBOT498213:1:Tno19201921-19230-----
CBOT508765:1:Tyes15--0------
CBOT515621:2:Tyes20942095-20970-----
CBOT536232:0:Tno20952096-20980-----
CBUR227377:1:Tyes1417141521413135314221421014141
CBUR360115:1:Tno1481147921477141514861485014781
CBUR434922:2:Tno57152796301152981528
CCAV227941:1:Tyes-1-50---8490850
CCHL340177:0:Tyes-29917581-1754175317560877
CCON360104:2:Tyes-616--3280-216203
CCUR360105:0:Tyes-600--123-0122416821223
CDES477974:0:Tyes01------2-
CDIF272563:1:Tyes20492050-0----2051-
CDIP257309:0:Tyes-0-2----1-
CEFF196164:0:Fyes-0-2----1-
CFEL264202:1:Tyes-877-----18780
CFET360106:0:Tyes-------12900
CGLU196627:0:Tyes01-3----2-
CHOM360107:1:Tyes-11--0--1281193129
CHUT269798:0:Tyes3410--1028--1378212796
CHYD246194:0:Tyes0--3----2-
CJAP155077:0:Tyes3290-54718
CJEI306537:0:Tyes01-3----2-
CJEJ192222:0:Tyes----8226867015801
CJEJ195099:0:Tno----9106665017361
CJEJ354242:2:Tyes----804--015191
CJEJ360109:0:Tyes----654--018591
CJEJ407148:0:Tno----832--015721
CKLU431943:1:Tyes0--4------
CMET456442:0:Tyes-1------0-
CMIC31964:2:Tyes---0----1-
CMIC443906:2:Tyes---1----0-
CMUR243161:1:Tyes-45-0---14546146
CNOV386415:0:Tyes14--0------
CPEL335992:0:Tyes---0276325-6
CPER195102:1:Tyes01-7------
CPER195103:0:Tno01-7------
CPER289380:3:Tyes01-8------
CPHY357809:0:Tyes10-11601649-----
CPNE115711:1:Tyes-1-49---9510952
CPNE115713:0:Tno-50-0---22151220
CPNE138677:0:Tno-52-0---22553224
CPNE182082:0:Tno-55-0---22956228
CPRO264201:0:Fyes-1-1339---187201873
CPSY167879:0:Tyes3793786-02143775
CRUT413404:0:Tyes---0-307308115-116
CSAL290398:0:Tyes32100465819
CSP501479:7:Fyes----0214-5
CSP501479:8:Fyes01-875----2-
CSP78:2:Tyes58558442615795860426642635834262
CTEP194439:0:Tyes-037113829843653643671381369
CTET212717:0:Tyes01-3------
CTRA471472:0:Tyes-49-0---14850149
CTRA471473:0:Tno-49-0---14850149
CVES412965:0:Tyes3130-17-311312119-120
CVIO243365:0:Tyes4225423343086-0454242353
DARO159087:0:Tyes9110166452121
DDES207559:0:Tyes757758076011782090208920927592093
DETH243164:0:Tyes1620-2----1-
DGEO319795:1:Tyes-398-18581361---0-
DHAF138119:0:Tyes872873-8760---874-
DNOD246195:0:Tyes56-8-34170
DOLE96561:0:Tyes--18590-18631864186118581860
DPSY177439:2:Tyes--69012000687686689-1156
DRAD243230:3:Tyes-828-2073461---0-
DRED349161:0:Tyes10641063-10600---1062-
DSHI398580:5:Tyes21101679465809
DSP216389:0:Tyes1620-2----1-
DSP255470:0:Tno1620-2----1-
DVUL882:1:Tyes1360-11761364014942202220613632207
ECAN269484:0:Tyes---355----0568
ECAR218491:0:Tyes1121112261124021411235
ECHA205920:0:Tyes--------0418
ECOL199310:0:Tno1421142271425021414246
ECOL316407:0:Tno1144114561148021411475
ECOL331111:6:Tno1280128161284021412835
ECOL362663:0:Tno1050105161054021410535
ECOL364106:1:Tno1331133271335021413346
ECOL405955:2:Tyes1102110361106021411055
ECOL409438:6:Tyes1254125561258021412575
ECOL413997:0:Tno1128112961132021411315
ECOL439855:4:Tno541540653702145385
ECOL469008:0:Tno4311220112811261127112411123
ECOL481805:0:Tno4311420114811461147114411143
ECOL585034:0:Tno1218121961222021412215
ECOL585035:0:Tno1112111361116021411155
ECOL585055:0:Tno1310131161314021413135
ECOL585056:2:Tno1331133261335021413345
ECOL585057:0:Tno491490648702144885
ECOL585397:0:Tno1310131161314021413135
ECOL83334:0:Tno1832183361836021418355
ECOLI:0:Tno1163116461168021411675
ECOO157:0:Tno--61874021418735
EFAE226185:3:Tyes10-544------
EFER585054:1:Tyes4311450115111491150114711146
ELIT314225:0:Tyes16071610-24351426-1425142024360
ERUM254945:0:Tyes--------0615
ERUM302409:0:Tno--------0606
ESP42895:1:Tyes1196119761199021411985
FALN326424:0:Tyes---538---0539-
FJOH376686:0:Tyes16641674--0---1396-
FMAG334413:1:Tyes0--78----2-
FNOD381764:0:Tyes-0-321----936-
FNUC190304:0:Tyes1685--0----682803
FPHI484022:1:Tyes12971145-1142-45211430
FRANT:0:Tno---0-1771761791181
FSP106370:0:Tyes---423---0424-
FSP1855:0:Tyes---1---4500-
FSUC59374:0:Tyes-2537-1651117--12480
FTUL351581:0:Tno652524-521-1035225
FTUL393011:0:Tno603484-481-1034825
FTUL393115:0:Tyes3342-0-1771761791181
FTUL401614:0:Tyes534667-670-1036695
FTUL418136:0:Tno0125-128-348349346127344
FTUL458234:0:Tno625510-507-1035085
GBET391165:0:Tyes42-05769110
GFOR411154:0:Tyes96109-3251559--291101541
GKAU235909:1:Tyes16501651-1653602--0--
GMET269799:1:Tyes3228020281627982797280012757
GOXY290633:5:Tyes3--0465819
GSUL243231:0:Tyes1045104425151042341823010432268
GTHE420246:1:Tyes10861087-10890-----
GURA351605:0:Tyes1213121434751216409734112150
GVIO251221:0:Tyes-239402013-626--2816-
HACI382638:1:Tyes-602--198--05961
HARS204773:0:Tyes212028282202220242023202602027
HAUR316274:2:Tyes0220-738---22562480-
HCHE349521:0:Tyes78011645291
HDUC233412:0:Tyes10141015-2103210301031102901028
HHAL349124:0:Tyes3290-54718
HHEP235279:0:Tyes----459--06961
HINF281310:0:Tyes01-373717269268
HINF374930:0:Tyes7776-740214755
HINF71421:0:Tno01-368666764263
HMAR272569:8:Tyes-------0--
HMOD498761:0:Tyes54-0----3-
HMUK485914:1:Tyes-------0--
HNEP81032:0:Tyes2--165769010
HPY:0:Tno-380--0---375628
HPYL357544:1:Tyes-393--0---390607
HPYL85963:0:Tno-363--0---359601
HSOM205914:1:Tyes1211-25302142545
HSOM228400:0:Tno1514-1653021416525
HWAL362976:1:Tyes-------0--
ILOI283942:0:Tyes78010645291
JSP290400:1:Tyes2-13244557611012
JSP375286:0:Tyes212193238218721892188219102192
KPNE272620:2:Tyes0135433311335393538354123542
KRAD266940:2:Fyes-3-0----1-
LACI272621:0:Tyes10-342------
LBIF355278:2:Tyes---0----3104-
LBIF456481:2:Tno---0----3219-
LBOR355276:1:Tyes---1----0-
LBOR355277:1:Tno---0----1-
LBRE387344:2:Tyes3132-0------
LCAS321967:1:Tyes0--248------
LCHO395495:0:Tyes35053504148414952492024931486533377
LDEL321956:0:Tyes746747-0------
LDEL390333:0:Tyes683684-0------
LGAS324831:0:Tyes10-820------
LHEL405566:0:Tyes-0-316------
LINN272626:1:Tno01-3------
LINT189518:1:Tyes---0----3-
LINT267671:1:Tno---1----0-
LINT363253:3:Tyes1075-0159612582583580158579
LJOH257314:0:Tyes10-275------
LLAC272622:5:Tyes01--------
LLAC272623:0:Tyes01--------
LMES203120:1:Tyes---0------
LMON169963:0:Tno01-3------
LMON265669:0:Tyes01-3------
LPLA220668:0:Tyes---0------
LPNE272624:0:Tno290275502892872882851756
LPNE297245:1:Fno198277001992012002031771
LPNE297246:1:Fyes286278002852832842811781
LPNE400673:0:Tno285280202842822832801803
LREU557436:0:Tyes10-25------
LSAK314315:0:Tyes10-977------
LSPH444177:1:Tyes-0--------
LWEL386043:0:Tyes01-3------
LXYL281090:0:Tyes---0----1-
MABS561007:1:Tyes0--61380-----
MACE188937:0:Tyes-------0--
MAER449447:0:Tyes43030-331------
MAQU351348:2:Tyes780-645291
MART243272:0:Tyes---0------
MAVI243243:0:Tyes01-8------
MBAR269797:1:Tyes-------0--
MBOV233413:0:Tno01-12----2-
MBOV410289:0:Tno01-13----2-
MBUR259564:0:Tyes-------0--
MCAP243233:0:Tyes321104769110
MEXT419610:0:Tyes3819-38932038166713814381103894
MFLA265072:0:Tyes7857947787967840783780795779
MGIL350054:3:Tyes0--4----2-
MHUN323259:0:Tyes-1------0-
MLEP272631:0:Tyes32-0------
MLOT266835:2:Tyes10110427452141
MMAG342108:0:Tyes8100-7563112
MMAR368407:0:Tyes-------0--
MMAR394221:0:Tyes7--18634190
MMAZ192952:0:Tyes-------0--
MMOB267748:0:Tyes---0------
MPET420662:1:Tyes029021021101026192621262010191551020
MSME246196:0:Tyes5--0----3-
MSP164756:1:Tno1615-0----14-
MSP164757:0:Tno1615-0----14-
MSP189918:2:Tyes1615-0----14-
MSP266779:3:Tyes790236452101
MSP400668:0:Tyes218--43607
MSP409:2:Tyes787555160617895612955295219460
MSUC221988:0:Tyes32-091110131-
MTBCDC:0:Tno0--11----2-
MTBRV:0:Tno0--11----2-
MTHE264732:0:Tyes0--4----2-
MTHE349307:0:Tyes-------0--
MTUB336982:0:Tno0--10----2-
MTUB419947:0:Tyes0--12----2-
MVAN350058:0:Tyes5--0----3-
MXAN246197:0:Tyes1897190001902140526602659266219011526
NARO279238:0:Tyes3534-31630632631634330
NEUR228410:0:Tyes32100465819
NEUT335283:2:Tyes32100465819
NFAR247156:2:Tyes-0-6----1-
NGON242231:0:Tyes5641440-1034-1114--0-
NHAM323097:2:Tyes131401712674151
NMEN122586:0:Tno9440-1331-1408--1109-
NMEN122587:0:Tyes0795-475-560--202-
NMEN272831:0:Tno7940-1140-1213--963-
NMEN374833:0:Tno0744-420-510--199-
NMUL323848:3:Tyes78010645291
NOCE323261:1:Tyes32100465819
NSEN222891:0:Tyes--------0-
NSP103690:6:Tyes25430-39403736272--1940-
NSP35761:1:Tyes---0----2-
NSP387092:0:Tyes-544-0130---1313660
NWIN323098:0:Tyes111201610674131
OANT439375:5:Tyes1312210141615181120
OCAR504832:0:Tyes11130179452141
OIHE221109:0:Tyes358359-3600-----
OTSU357244:0:Fyes-----69169209081022
PACN267747:0:Tyes---0----1-
PAER208963:0:Tyes78010645291
PAER208964:0:Tno32100465819
PARC259536:0:Tyes1110-2385015515505530208
PATL342610:0:Tyes780-645291
PCAR338963:0:Tyes1942194101939108925862587258419402583
PCRY335284:1:Tyes1413-8045184624634600834
PDIS435591:0:Tyes-0-----3281141-
PENT384676:0:Tyes78010613015291
PFLU205922:0:Tyes78010645291
PFLU216595:1:Tyes78010645291
PFLU220664:0:Tyes78010645291
PGIN242619:0:Tyes0289-----211726-
PHAL326442:1:Tyes670--45281
PING357804:0:Tyes3213-79811012
PINT246198:0:Tyes--------0-
PINT246198:1:Tyes0------571-1209
PLUM243265:0:Fyes680679667702146785
PLUT319225:0:Tyes-111861003-10310025
PMAR167539:0:Tyes-0------398-
PMAR167540:0:Tyes--------0-
PMAR167542:0:Tyes--------0-
PMAR167546:0:Tyes--------0-
PMAR167555:0:Tyes-0--------
PMAR59920:0:Tno-0--------
PMAR74546:0:Tyes--------0-
PMAR74547:0:Tyes--------0-
PMAR93060:0:Tyes--------0-
PMEN399739:0:Tyes32100465819
PMOB403833:0:Tyes---0----668-
PMUL272843:1:Tyes1011-145341120
PNAP365044:8:Tyes2015541227242320732424155629181555
PPEN278197:0:Tyes3132-0------
PPRO298386:2:Tyes4314270143314311432142911428
PPUT160488:0:Tno32100465819
PPUT351746:0:Tyes32100465819
PPUT76869:0:Tno78010645291
PRUM264731:0:Tyes15991188--1517--2560-
PSP117:0:Tyes---4964063---0-
PSP296591:2:Tyes298629878968771798180017998940895
PSP312153:0:Tyes162716260345108645216251
PSP56811:2:Tyes533505-97-6526516545140
PSTU379731:0:Tyes78010645291
PSYR205918:0:Tyes32100465819
PSYR223283:2:Tyes78010645291
PTHE370438:0:Tyes32-0----1-
RAKA293614:0:Fyes--148614-2632622530956
RALB246199:0:Tyes63-2919----0-
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