CANDIDATE ID: 120

CANDIDATE ID: 120

NUMBER OF GENES: 10
AVERAGE SCORE:    9.9938258e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    7.0000009e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G6986 (dmlA) (b1800)
   Products of gene:
     - G6986-MONOMER (D-malate dehydrogenase (decarboxylating))
       Reactions:
        NAD+ + (R)-malate  ->  NADH + CO2 + pyruvate
         In pathways
         PWY0-1465 (D-malate degradation)

- EG11583 (gcl) (b0507)
   Products of gene:
     - GLYOCARBOLIG-MONOMER (Gcl)
     - GLYOCARBOLIG-CPLX (glyoxylate carboligase)
       Reactions:
        2 glyoxylate + H+  ->  CO2 + tartronate semialdehyde
         In pathways
         GLYCOL-GLYOXDEG-PWY (superpathway of glycol metabolism and degradation)
         GLYCOLATEMET-PWY (glycolate and glyoxylate degradation I)

- EG11577 (leuB) (b0073)
   Products of gene:
     - 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
     - 3-ISOPROPYLMALDEHYDROG-CPLX (3-isopropylmalate dehydrogenase)
       Reactions:
        (2R,3S)-3-isopropylmalate + NAD+  =  (2S)-2-isopropyl-3-oxosuccinate + NADH + H+
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)

- EG11576 (leuC) (b0072)
   Products of gene:
     - LEUC-MONOMER (LeuC)
     - 3-ISOPROPYLMALISOM-CPLX (isopropylmalate isomerase)
       Reactions:
        2-isopropylmaleate + H2O  ->  (2R,3S)-3-isopropylmalate
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)
        (2S)-2-isopropylmalate  =  2-isopropylmaleate + H2O
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)

- EG11575 (leuD) (b0071)
   Products of gene:
     - LEUD-MONOMER (LeuD)
     - 3-ISOPROPYLMALISOM-CPLX (isopropylmalate isomerase)
       Reactions:
        2-isopropylmaleate + H2O  ->  (2R,3S)-3-isopropylmalate
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)
        (2S)-2-isopropylmalate  =  2-isopropylmaleate + H2O
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)

- EG11226 (leuA) (b0074)
   Products of gene:
     - 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
       Reactions:
        2-oxoisovalerate + acetyl-CoA + H2O  ->  (2S)-2-isopropylmalate + coenzyme A + H+
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)

- EG10502 (ilvN) (b3670)
   Products of gene:
     - SMALLILVN-MONOMER (IlvN)
     - ACETOLACTSYNI-CPLX (acetohydroxybutanoate synthase / acetolactate synthase)
       Reactions:
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)

- EG10500 (ilvI) (b0077)
   Products of gene:
     - ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
     - ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase)
       Reactions:
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)

- EG10499 (ilvH) (brnP)
   Products of gene:
     - ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
     - ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase)
       Reactions:
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)

- EG10494 (ilvB) (b3671)
   Products of gene:
     - LARGEILVB-MONOMER (IlvB)
     - ACETOLACTSYNI-CPLX (acetohydroxybutanoate synthase / acetolactate synthase)
       Reactions:
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)



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ORGANISMS CONTAINING AT LEAST 9 GENES FROM THE GROUP:

Total number of orgs: 169
Effective number of orgs (counting one per cluster within 468 clusters): 117

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175810
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295310
YPES386656 ncbi Yersinia pestis Pestoides F10
YPES377628 ncbi Yersinia pestis Nepal51610
YPES360102 ncbi Yersinia pestis Antiqua10
YPES349746 ncbi Yersinia pestis Angola10
YPES214092 ncbi Yersinia pestis CO9210
YPES187410 ncbi Yersinia pestis KIM 1010
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808110
VVUL216895 ncbi Vibrio vulnificus CMCP610
VVUL196600 ncbi Vibrio vulnificus YJ01610
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 221063310
VFIS312309 ncbi Vibrio fischeri ES11410
VCHO345073 ncbi Vibrio cholerae O39510
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N1696110
TTHE300852 ncbi Thermus thermophilus HB810
TTHE262724 ncbi Thermus thermophilus HB2710
TELO197221 ncbi Thermosynechococcus elongatus BP-110
TCRU317025 ncbi Thiomicrospira crunogena XCL-29
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT210
STHE292459 ncbi Symbiobacterium thermophilum IAM 1486310
SSUI391296 ncbi Streptococcus suis 98HAH339
SSP94122 ncbi Shewanella sp. ANA-39
SSP64471 ncbi Synechococcus sp. CC93119
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)10
SSP321327 ncbi Synechococcus sp. JA-3-3Ab10
SSP1148 ncbi Synechocystis sp. PCC 68039
SSP1131 Synechococcus sp. CC96059
SSON300269 ncbi Shigella sonnei Ss04610
SSED425104 ncbi Shewanella sediminis HAW-EB310
SPRO399741 ncbi Serratia proteamaculans 56810
SPEA398579 ncbi Shewanella pealeana ATCC 70034510
SONE211586 ncbi Shewanella oneidensis MR-110
SLOI323850 ncbi Shewanella loihica PV-410
SHIGELLA ncbi Shigella flexneri 2a str. 2457T10
SHAL458817 ncbi Shewanella halifaxensis HAW-EB410
SFLE373384 ncbi Shigella flexneri 5 str. 84019
SFLE198214 ncbi Shigella flexneri 2a str. 30110
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47610
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6710
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 915010
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1810
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty210
SELO269084 ncbi Synechococcus elongatus PCC 63019
SDYS300267 ncbi Shigella dysenteriae Sd19710
SDEN318161 ncbi Shewanella denitrificans OS2179
SDEG203122 ncbi Saccharophagus degradans 2-409
SBOY300268 ncbi Shigella boydii Sb22710
SBAL402882 ncbi Shewanella baltica OS1859
SBAL399599 ncbi Shewanella baltica OS1959
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170299
RSOL267608 ncbi Ralstonia solanacearum GMI10009
RPAL316058 ncbi Rhodopseudomonas palustris HaA29
RPAL316057 ncbi Rhodopseudomonas palustris BisB59
RPAL316056 ncbi Rhodopseudomonas palustris BisB189
RPAL258594 ncbi Rhodopseudomonas palustris CGA0099
RMET266264 ncbi Ralstonia metallidurans CH349
RFER338969 ncbi Rhodoferax ferrireducens T1189
REUT381666 ncbi Ralstonia eutropha H169
REUT264198 ncbi Ralstonia eutropha JMP1349
PSTU379731 ncbi Pseudomonas stutzeri A15019
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-19
PSP296591 ncbi Polaromonas sp. JS6669
PPUT351746 ncbi Pseudomonas putida F19
PPRO298386 ncbi Photobacterium profundum SS910
PMUL272843 ncbi Pasteurella multocida multocida Pm7010
PMEN399739 ncbi Pseudomonas mendocina ymp9
PMAR74547 ncbi Prochlorococcus marinus MIT 931310
PMAR59920 ncbi Prochlorococcus marinus NATL2A9
PMAR167555 ncbi Prochlorococcus marinus NATL1A9
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO110
PING357804 ncbi Psychromonas ingrahamii 379
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1259
PFLU220664 ncbi Pseudomonas fluorescens Pf-59
PFLU205922 ncbi Pseudomonas fluorescens Pf0-19
PENT384676 ncbi Pseudomonas entomophila L489
PATL342610 ncbi Pseudoalteromonas atlantica T6c9
OIHE221109 ncbi Oceanobacillus iheyensis HTE83110
OCAR504832 ncbi Oligotropha carboxidovorans OM59
NSP103690 ncbi Nostoc sp. PCC 71209
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E10
MMAG342108 ncbi Magnetospirillum magneticum AMB-19
MCAP243233 ncbi Methylococcus capsulatus Bath9
MAQU351348 ncbi Marinobacter aquaeolei VT810
MAER449447 ncbi Microcystis aeruginosa NIES-8439
LSPH444177 ncbi Lysinibacillus sphaericus C3-419
LCHO395495 ncbi Leptothrix cholodnii SP-610
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857810
JSP375286 ncbi Janthinobacterium sp. Marseille9
HINF71421 ncbi Haemophilus influenzae Rd KW209
HINF374930 ncbi Haemophilus influenzae PittEE9
HINF281310 ncbi Haemophilus influenzae 86-028NP9
HCHE349521 ncbi Hahella chejuensis KCTC 23969
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 2377910
HARS204773 ncbi Herminiimonas arsenicoxydans9
GVIO251221 ncbi Gloeobacter violaceus PCC 74219
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-210
GKAU235909 ncbi Geobacillus kaustophilus HTA42610
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S859
ESP42895 Enterobacter sp.10
EFER585054 ncbi Escherichia fergusonii ATCC 3546910
ECOO157 ncbi Escherichia coli O157:H7 EDL93310
ECOL83334 Escherichia coli O157:H710
ECOL585397 ncbi Escherichia coli ED1a10
ECOL585057 ncbi Escherichia coli IAI3910
ECOL585056 ncbi Escherichia coli UMN02610
ECOL585055 ncbi Escherichia coli 5598910
ECOL585035 ncbi Escherichia coli S8810
ECOL585034 ncbi Escherichia coli IAI110
ECOL481805 ncbi Escherichia coli ATCC 873910
ECOL469008 ncbi Escherichia coli BL21(DE3)10
ECOL439855 ncbi Escherichia coli SMS-3-510
ECOL413997 ncbi Escherichia coli B str. REL60610
ECOL409438 ncbi Escherichia coli SE1110
ECOL405955 ncbi Escherichia coli APEC O110
ECOL364106 ncbi Escherichia coli UTI8910
ECOL362663 ncbi Escherichia coli 53610
ECOL331111 ncbi Escherichia coli E24377A10
ECOL316407 ncbi Escherichia coli K-12 substr. W311010
ECOL199310 ncbi Escherichia coli CFT07310
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104310
DARO159087 ncbi Dechloromonas aromatica RCB9
CSP501479 Citreicella sp. SE459
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)9
CPSY167879 ncbi Colwellia psychrerythraea 34H9
CJEJ407148 ncbi Campylobacter jejuni jejuni 811169
CJEJ360109 ncbi Campylobacter jejuni doylei 269.979
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111689
BWEI315730 ncbi Bacillus weihenstephanensis KBAB49
BVIE269482 ncbi Burkholderia vietnamiensis G49
BTHU412694 ncbi Bacillus thuringiensis Al Hakam9
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-279
BTHA271848 ncbi Burkholderia thailandensis E2649
BSUB ncbi Bacillus subtilis subtilis 16810
BSP376 Bradyrhizobium sp.9
BSP36773 Burkholderia sp.9
BPUM315750 ncbi Bacillus pumilus SAFR-03210
BPSE320373 ncbi Burkholderia pseudomallei 6689
BPSE320372 ncbi Burkholderia pseudomallei 1710b9
BPSE272560 ncbi Burkholderia pseudomallei K962439
BMAL320389 ncbi Burkholderia mallei NCTC 102479
BMAL320388 ncbi Burkholderia mallei SAVP19
BLIC279010 ncbi Bacillus licheniformis ATCC 1458010
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1109
BCLA66692 ncbi Bacillus clausii KSM-K169
BCER572264 ncbi Bacillus cereus 03BB1029
BCER405917 Bacillus cereus W9
BCER315749 ncbi Bacillus cytotoxicus NVH 391-9810
BCER288681 ncbi Bacillus cereus E33L9
BCER226900 ncbi Bacillus cereus ATCC 145799
BCEN331272 ncbi Burkholderia cenocepacia HI24249
BCEN331271 ncbi Burkholderia cenocepacia AU 10549
BANT592021 ncbi Bacillus anthracis A02489
BANT568206 ncbi Bacillus anthracis CDC 6849
BANT261594 ncbi Bacillus anthracis Ames Ancestor9
BANT260799 ncbi Bacillus anthracis Sterne9
BAMY326423 ncbi Bacillus amyloliquefaciens FZB4210
BAMB398577 ncbi Burkholderia ambifaria MC40-69
BAMB339670 ncbi Burkholderia ambifaria AMMD9
AVAR240292 ncbi Anabaena variabilis ATCC 294139
ASP62928 ncbi Azoarcus sp. BH729
ASAL382245 ncbi Aeromonas salmonicida salmonicida A44910
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL0310
APLE416269 ncbi Actinobacillus pleuropneumoniae L209
AMAR329726 ncbi Acaryochloris marina MBIC110179
AHYD196024 Aeromonas hydrophila dhakensis10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C10
ACRY349163 ncbi Acidiphilium cryptum JF-59
ABOR393595 ncbi Alcanivorax borkumensis SK29


Names of the homologs of the genes in the group in each of these orgs
  G6986   EG11583   EG11577   EG11576   EG11575   EG11226   EG10502   EG10500   EG10499   EG10494   
YPSE349747 YPSIP31758_1512YPSIP31758_3401YPSIP31758_3406YPSIP31758_3407YPSIP31758_3408YPSIP31758_3405YPSIP31758_1838YPSIP31758_3401YPSIP31758_3400YPSIP31758_1839
YPSE273123 YPTB2532YPTB0675YPTB0671YPTB0670YPTB0669YPTB0672YPTB2217YPTB0675YPTB0676YPTB2216
YPES386656 YPDSF_1907YPDSF_3102YPDSF_3107YPDSF_3108YPDSF_3109YPDSF_3106YPDSF_0848YPDSF_3102YPDSF_3101YPDSF_0849
YPES377628 YPN_2090YPN_0407YPN_0402YPN_0401YPN_0400YPN_0403YPN_1756YPN_0407YPN_0408YPN_1755
YPES360102 YPA_1991YPA_3560YPA_3565YPA_3566YPA_3567YPA_3564YPA_1643YPA_3560YPA_3559YPA_1642
YPES349746 YPANGOLA_A1756YPANGOLA_A2932YPANGOLA_A2937YPANGOLA_A2938YPANGOLA_A2939YPANGOLA_A2936YPANGOLA_A2288YPANGOLA_A2932YPANGOLA_A2931YPANGOLA_A0482
YPES214092 YPO2496YPO0539YPO0532YPO0531YPO0530YPO0533YPO2294YPO0539YPO0540YPO2293
YPES187410 Y1692Y3640Y3646Y3647Y3648Y3645Y2127Y3640Y3639Y2126
YENT393305 YE0653YE0658YE0653YE0652YE0651YE0654YE2061YE0658YE0659YE2060
VVUL216895 VV1_0655VV1_0648VV1_0655VV1_0656VV1_0657VV1_0654VV1_0647VV1_0648VV1_0647VV1_1032
VVUL196600 VV0486VV0495VV0486VV0485VV0484VV0487VV0496VV0495VV0496VV3240
VPAR223926 VP0344VP0352VP0344VP0343VP0342VP0346VP0353VP0352VP0353VP3058
VFIS312309 VF0294VF2263VF0294VF0293VF0292VF0295VF2262VF2263VF2262VF2556
VCHO345073 VC0395_A2066VC0395_A2059VC0395_A2066VC0395_A2067VC0395_A2068VC0395_A2065VC0395_A2058VC0395_A2059VC0395_A2058VC0395_A2488
VCHO VC2491VC2483VC2491VC2492VC2493VC2490VC2482VC2483VC2482VC0031
TTHE300852 TTHA1378TTHA1213TTHA1230TTHA1228TTHA1229TTHA1210TTHA1212TTHA1213TTHA1212TTHA1213
TTHE262724 TT_C1012TT_C0852TT_C0867TT_C0865TT_C0866TT_C0849TT_C0851TT_C0852TT_C0851TT_C0852
TELO197221 TLR1600TLR1296TLR1600TLR0909TLR1234TLL1397TLL0880TLR1296TLL0880TLR1296
TCRU317025 TCR_0634TCR_0797TCR_0795TCR_0796TCR_0611TCR_0635TCR_0634TCR_0635TCR_0634
STYP99287 STM0112STM0517STM0112STM0111STM0110STM0113STM3795STM0116STM0117STM3901
STHE292459 STH2344STH2684STH3035STH2116STH2115STH2687STH2689STH2684STH2689STH2684
SSUI391296 SSU98_1953SSU98_1891SSU98_1953SSU98_1952SSU98_1951SSU98_1954SSU98_1891SSU98_1890SSU98_1891
SSP94122 SHEWANA3_2269SHEWANA3_3760SHEWANA3_3759SHEWANA3_3758SHEWANA3_3761SHEWANA3_2270SHEWANA3_2269SHEWANA3_2270SHEWANA3_0356
SSP64471 GSYN2129GSYN1830GSYN0323GSYN0324GSYN1052GSYN0962GSYN2129GSYN0962GSYN2129
SSP321332 CYB_1631CYB_0648CYB_1631CYB_0327CYB_2021CYB_1442CYB_0971CYB_0648CYB_0971CYB_0648
SSP321327 CYA_1798CYA_2073CYA_1798CYA_0286CYA_2201CYA_2223CYA_2130CYA_2073CYA_2130CYA_2073
SSP1148 SLR2088SLR1517SLL1470SLL1444SLR0186SLL0065SLR2088SLL0065SLR2088
SSP1131 SYNCC9605_1865SYNCC9605_0717SYNCC9605_1865SYNCC9605_0256SYNCC9605_0257SYNCC9605_1939SYNCC9605_1989SYNCC9605_1989SYNCC9605_0717
SSON300269 SSO_1361SSO_0084SSO_0080SSO_0079SSO_0078SSO_0081SSO_3624SSO_0084SSO_0085SSO_3939
SSED425104 SSED_0394SSED_2666SSED_0394SSED_0395SSED_0396SSED_0393SSED_2667SSED_2666SSED_2667SSED_4165
SPRO399741 SPRO_0744SPRO_0748SPRO_0744SPRO_0743SPRO_0742SPRO_0745SPRO_0733SPRO_0748SPRO_0749SPRO_0734
SPEA398579 SPEA_2980SPEA_1911SPEA_3827SPEA_3826SPEA_3825SPEA_3828SPEA_1910SPEA_1911SPEA_1910SPEA_0345
SONE211586 SO_4235SO_2279SO_4235SO_4234SO_4233SO_4236SO_2278SO_2279SO_2278SO_4347
SLOI323850 SHEW_2760SHEW_1776SHEW_3471SHEW_3470SHEW_3469SHEW_3472SHEW_1775SHEW_1776SHEW_1775SHEW_0289
SHIGELLA LEUBGCLLEUBLEUCLEUDLEUAILVNILVIILVHILVB
SHAL458817 SHAL_0439SHAL_2387SHAL_0439SHAL_0440SHAL_0441SHAL_0438SHAL_2388SHAL_2387SHAL_2388SHAL_3944
SFLE373384 SFV_0474SFV_0065SFV_0064SFV_0063SFV_0066SFV_3839SFV_0068SFV_0069SFV_3838
SFLE198214 AAN41733.1AAN42100.1AAN41733.1AAN41732.1AAN41731.1AAN41734.1AAN45231.1AAN41737.1AAN41738.1AAN45280.1
SENT454169 SEHA_C0123SEHA_C0625SEHA_C0123SEHA_C0122SEHA_C0121SEHA_C0124SEHA_C4126SEHA_C0127SEHA_C0128SEHA_C4232
SENT321314 SCH_0108SCH_0113SCH_0108SCH_0107SCH_0106SCH_0109SCH_3715SCH_0113SCH_0114SCH_3716
SENT295319 SPA0114SPA2205SPA0114SPA0113SPA0112SPA0115SPA3645SPA0118SPA0119SPA3740
SENT220341 STY0131STY0565STY0131STY0130STY0129STY0132STY3987STY0135STY0136STY3986
SENT209261 T0116T2343T0116T0115T0114T0117T3723T0120T0121T3722
SELO269084 SYC1366_CSYC2490_CSYC2197_DSYC1562_CSYC0145_DSYC1672_CSYC1366_CSYC1672_CSYC1366_C
SDYS300267 SDY_1701SDY_0395SDY_0100SDY_0099SDY_0098SDY_0101SDY_4154SDY_0107SDY_0108SDY_4155
SDEN318161 SDEN_2561SDEN_0335SDEN_0336SDEN_0337SDEN_0334SDEN_2123SDEN_2122SDEN_2123SDEN_3414
SDEG203122 SDE_2084SDE_2544SDE_2084SDE_2086SDE_2085SDE_2523SDE_2543SDE_2544SDE_2543
SBOY300268 SBO_1288SBO_0411SBO_0060SBO_0059SBO_0058SBO_0061SBO_3699SBO_0065SBO_0066SBO_3779
SBAL402882 SHEW185_2374SHEW185_0386SHEW185_0387SHEW185_0388SHEW185_0385SHEW185_2375SHEW185_2374SHEW185_2375SHEW185_4009
SBAL399599 SBAL195_2490SBAL195_0398SBAL195_0399SBAL195_0400SBAL195_0397SBAL195_2491SBAL195_2490SBAL195_2491SBAL195_4128
RSPH349101 RSPH17029_3035RSPH17029_1294RSPH17029_2518RSPH17029_2523RSPH17029_2521RSPH17029_1005RSPH17029_1294RSPH17029_1293RSPH17029_1294
RSOL267608 RSP1612RSC3281RSC1988RSC1990RSC1989RSC2072RSC2076RSC2077RSC2076
RPAL316058 RPB_3626RPB_3345RPB_0335RPB_0348RPB_0342RPB_3330RPB_3345RPB_3344RPB_3345
RPAL316057 RPD_1841RPD_2098RPD_0490RPD_0504RPD_0498RPD_2112RPD_2098RPD_2100RPD_2098
RPAL316056 RPC_4630RPC_3255RPC_0240RPC_0227RPC_0230RPC_3235RPC_3255RPC_3253RPC_3255
RPAL258594 RPA1742RPA2031RPA0227RPA0240RPA0235RPA2046RPA2031RPA2032RPA2031
RMET266264 RMET_0404RMET_3448RMET_2472RMET_4273RMET_2473RMET_0918RMET_0912RMET_0911RMET_0912
RFER338969 RFER_2247RFER_3322RFER_1793RFER_1795RFER_1794RFER_2345RFER_3323RFER_3322RFER_3323
REUT381666 H16_A0477H16_A3598H16_A2619H16_A2621H16_A2620H16_A1041H16_A1036H16_A1035H16_A1036
REUT264198 REUT_B4115REUT_A3291REUT_A2311REUT_A2314REUT_A2312REUT_A0953REUT_A0948REUT_A0947REUT_A0948
PSTU379731 PST_1774PST_3114PST_1774PST_1772PST_1773PST_3240PST_3257PST_3258PST_3257
PSP312153 PNUC_1028PNUC_1063PNUC_0767PNUC_0764PNUC_0766PNUC_1058PNUC_1062PNUC_1063PNUC_1062
PSP296591 BPRO_3066BPRO_4561BPRO_3610BPRO_3608BPRO_3609BPRO_2322BPRO_2318BPRO_2317BPRO_2318
PPUT351746 PPUT_3771PPUT_1572PPUT_3771PPUT_5022PPUT_3773PPUT_4543PPUT_4544PPUT_4543PPUT_4544
PPRO298386 PBPRA0418PBPRA2275PBPRA0418PBPRA0417PBPRA0416PBPRA0419PBPRA0426PBPRA0425PBPRA0426PBPRA3593
PMUL272843 PM1961PM0870PM1961PM1960PM1959PM1962PM0869PM0870PM0869PM1628
PMEN399739 PMEN_2769PMEN_2721PMEN_2723PMEN_2722PMEN_0989PMEN_1007PMEN_1006PMEN_1007PMEN_1006
PMAR74547 PMT0531PMT1239PMT0531PMT1844PMT1843PMT1121PMT1176PMT1239PMT1176PMT1239
PMAR59920 PMN2A_0194PMN2A_1858PMN2A_0194PMN2A_1622PMN2A_0686PMN2A_0764PMN2A_1858PMN2A_0764PMN2A_1858
PMAR167555 NATL1_08261NATL1_05831NATL1_08261NATL1_03341NATL1_15201NATL1_16041NATL1_05831NATL1_16041NATL1_05831
PLUM243265 PLU3674PLU3666PLU3674PLU3675PLU3676PLU3673PLU3665PLU3666PLU3665PLU4685
PING357804 PING_3430PING_2229PING_1669PING_1670PING_0216PING_3431PING_3430PING_3431PING_0348
PHAL326442 PSHAA2893PSHAA2893PSHAA2892PSHAA2891PSHAA2894PSHAB0463PSHAB0464PSHAB0463PSHAA2771
PFLU220664 PFL_3649PFL_1701PFL_2066PFL_2063PFL_2064PFL_5254PFL_5255PFL_5254PFL_5255
PFLU205922 PFL_1892PFL_1598PFL_1892PFL_1889PFL_1890PFL_4787PFL_4788PFL_4787PFL_4788
PENT384676 PSEEN2132PSEEN1672PSEEN1652PSEEN1650PSEEN1651PSEEN4710PSEEN4711PSEEN4710PSEEN4711
PATL342610 PATL_3197PATL_0624PATL_3269PATL_3270PATL_3271PATL_3268PATL_0625PATL_0624PATL_0625
OIHE221109 OB0661OB2623OB2619OB2618OB2617OB2620OB2622OB2623OB2622OB2623
OCAR504832 OCAR_5921OCAR_6562OCAR_4283OCAR_4273OCAR_4276OCAR_5296OCAR_5290OCAR_5291OCAR_5290
NSP103690 ALL4613ALR1313ALL1417ALL1416ALR4840ALR4627ALL4613ALR4627ALL4613
MSUC221988 MS1105MS1319MS0598MS0596MS0595MS0599MS1318MS1319MS1318MS2223
MMAG342108 AMB3176AMB3507AMB4069AMB4067AMB4068AMB3512AMB3507AMB3508AMB3507
MCAP243233 MCA_2270MCA_2063MCA_2065MCA_2064MCA_2275MCA_2271MCA_2270MCA_2271MCA_2270
MAQU351348 MAQU_2209MAQU_0882MAQU_1563MAQU_1565MAQU_1564MAQU_2477MAQU_0883MAQU_0882MAQU_0883MAQU_2114
MAER449447 MAE_50700MAE_00210MAE_53130MAE_36900MAE_54460MAE_48120MAE_50700MAE_48120MAE_50700
LSPH444177 BSPH_2213BSPH_3389BSPH_3385BSPH_3384BSPH_3383BSPH_3386BSPH_3389BSPH_3388BSPH_3389
LCHO395495 LCHO_2992LCHO_1135LCHO_1677LCHO_1675LCHO_1676LCHO_2888LCHO_2892LCHO_2893LCHO_2892LCHO_2893
KPNE272620 GKPORF_B5454GKPORF_B4361GKPORF_B4358GKPORF_B4357GKPORF_B4356GKPORF_B4359GKPORF_B3430GKPORF_B4361GKPORF_B4362GKPORF_B3431
JSP375286 MMA_1237MMA_0379MMA_2169MMA_2172MMA_2170MMA_2145MMA_2149MMA_2150MMA_2149
HINF71421 HI_0987HI_1585HI_0987HI_0988HI_0989HI_0986HI_1584HI_1585HI_1584
HINF374930 CGSHIEE_07030CGSHIEE_05525CGSHIEE_07030CGSHIEE_07025CGSHIEE_07020CGSHIEE_07035CGSHIEE_05520CGSHIEE_05525CGSHIEE_05520
HINF281310 NTHI1161NTHI1468NTHI1161NTHI1162NTHI1163NTHI1160NTHI1469NTHI1468NTHI1469
HCHE349521 HCH_05916HCH_02430HCH_02428HCH_02429HCH_05908HCH_05915HCH_05916HCH_05915HCH_06858
HAUR316274 HAUR_4439HAUR_4449HAUR_4439HAUR_4441HAUR_4440HAUR_4446HAUR_4448HAUR_4449HAUR_4448HAUR_4449
HARS204773 HEAR3229HEAR0332HEAR1217HEAR1215HEAR1216HEAR1242HEAR1238HEAR1237HEAR1238
GVIO251221 GLR3279GLL3551GLR3417GLR3418GLL2290GLL1136GLR3279GLL1136GLR3279
GTHE420246 GTNG_3379GTNG_2590GTNG_2586GTNG_2585GTNG_2584GTNG_2587GTNG_2589GTNG_2590GTNG_2589GTNG_2590
GKAU235909 GK2657GK2661GK2657GK2656GK2655GK2658GK2660GK2661GK2660GK2661
FSUC59374 FSU3213FSU3213FSU0466FSU0467FSU2908FSU3283FSU3284FSU3283FSU3284
ESP42895 ENT638_0621ENT638_0624ENT638_0621ENT638_0620ENT638_0619ENT638_0622ENT638_0026ENT638_0624ENT638_0625ENT638_0025
EFER585054 EFER_0095EFER_0099EFER_0095EFER_0094EFER_0093EFER_0096EFER_3967EFER_0099EFER_0100EFER_3968
ECOO157 YEAUGCLLEUBLEUCLEUDLEUAILVNILVIILVHILVG
ECOL83334 ECS2509ECS0568ECS0077ECS0076ECS0075ECS0078ECS4611ECS0081ECS0082ECS4702
ECOL585397 ECED1_0073ECED1_0528ECED1_0073ECED1_0072ECED1_0071ECED1_0074ECED1_4366ECED1_0079ECED1_0080ECED1_4454
ECOL585057 ECIAI39_1253ECIAI39_0081ECIAI39_0078ECIAI39_0077ECIAI39_0076ECIAI39_0079ECIAI39_4272ECIAI39_0081ECIAI39_0082ECIAI39_4273
ECOL585056 ECUMN_2090ECUMN_0548ECUMN_0075ECUMN_0074ECUMN_0073ECUMN_0076ECUMN_4201ECUMN_0078ECUMN_0079ECUMN_4294
ECOL585055 EC55989_1973EC55989_0522EC55989_0071EC55989_0070EC55989_0069EC55989_0072EC55989_4138EC55989_0074EC55989_0075EC55989_4240
ECOL585035 ECS88_0078ECS88_0506ECS88_0078ECS88_0077ECS88_0076ECS88_0079ECS88_4095ECS88_0081ECS88_0082ECS88_4191
ECOL585034 ECIAI1_1869ECIAI1_0510ECIAI1_0074ECIAI1_0073ECIAI1_0072ECIAI1_0075ECIAI1_3846ECIAI1_0077ECIAI1_0078ECIAI1_3955
ECOL481805 ECOLC_1833ECOLC_3115ECOLC_3584ECOLC_3585ECOLC_3586ECOLC_3583ECOLC_0029ECOLC_3580ECOLC_3579ECOLC_4234
ECOL469008 ECBD_1842ECBD_3150ECBD_3543ECBD_3544ECBD_3545ECBD_3542ECBD_0033ECBD_3539ECBD_3538ECBD_0032
ECOL439855 ECSMS35_1388ECSMS35_0550ECSMS35_0078ECSMS35_0077ECSMS35_0076ECSMS35_0079ECSMS35_4037ECSMS35_0083ECSMS35_0084ECSMS35_4134
ECOL413997 ECB_01770ECB_00457ECB_00075ECB_00074ECB_00073ECB_00076ECB_03554ECB_00079ECB_00080ECB_03555
ECOL409438 ECSE_1974ECSE_0533ECSE_0073ECSE_0072ECSE_0071ECSE_0074ECSE_3954ECSE_0079ECSE_0080ECSE_4051
ECOL405955 APECO1_1910APECO1_1507APECO1_1910APECO1_1911APECO1_1912APECO1_1909APECO1_2782APECO1_1907APECO1_1906APECO1_2703
ECOL364106 UTI89_C0080UTI89_C5032UTI89_C0080UTI89_C0079UTI89_C0078UTI89_C0081UTI89_C4226UTI89_C0085UTI89_C0086UTI89_C4324
ECOL362663 ECP_0075ECP_0568ECP_0075ECP_0074ECP_0073ECP_0076ECP_3877ECP_0079ECP_0080ECP_3962
ECOL331111 ECE24377A_2026ECE24377A_0544ECE24377A_0076ECE24377A_0075ECE24377A_0074ECE24377A_0077ECE24377A_4179ECE24377A_0079ECE24377A_0080ECE24377A_4180
ECOL316407 ECK1798:JW1789:B1800ECK0500:JW0495:B0507ECK0075:JW5807:B0073ECK0074:JW0071:B0072ECK0073:JW0070:B0071ECK0076:JW0073:B0074ECK3661:JW3645:B3670ECK0079:JW0076:B0077ECK0080:JW0077:B0078ECK3662:JW3646:B3671
ECOL199310 C0090C0622C0090C0089C0087C0091C4595C0095C0096C4690
ECAR218491 ECA3832ECA3829ECA3832ECA3833ECA3834ECA3831ECA3849ECA3829ECA3828ECA3848
DARO159087 DARO_1620DARO_0864DARO_0861DARO_0863DARO_3071DARO_1619DARO_3075DARO_3074DARO_1620
CSP501479 CSE45_5415CSE45_2368CSE45_0315CSE45_0307CSE45_0309CSE45_3330CSE45_2368CSE45_2369CSE45_2368
CRUT413404 RMAG_0445RMAG_0099RMAG_0372RMAG_0371RMAG_0449RMAG_0446RMAG_0445RMAG_0446RMAG_0445
CPSY167879 CPS_3540CPS_4209CPS_4210CPS_4211CPS_4208CPS_3237CPS_3236CPS_3237CPS_4843
CJEJ407148 C8J_1624C8J_1624C8J_1623C8J_1622C8J_1625C8J_0537C8J_0536C8J_0537C8J_0536
CJEJ360109 JJD26997_2095JJD26997_2095JJD26997_2094JJD26997_2092JJD26997_2096JJD26997_1095JJD26997_1096JJD26997_1095JJD26997_1096
CJEJ192222 CJ1718CCJ1718CCJ1717CCJ1716CCJ1719CCJ0575CJ0574CJ0575CJ0574
BWEI315730 BCERKBAB4_1319BCERKBAB4_1323BCERKBAB4_1324BCERKBAB4_1325BCERKBAB4_1322BCERKBAB4_1320BCERKBAB4_1707BCERKBAB4_1320BCERKBAB4_1707
BVIE269482 BCEP1808_3784BCEP1808_1802BCEP1808_4457BCEP1808_4454BCEP1808_4456BCEP1808_2344BCEP1808_2348BCEP1808_2349BCEP1808_2348
BTHU412694 BALH_1252BALH_1256BALH_1257BALH_1258BALH_1255BALH_1253BALH_1624BALH_1253BALH_1624
BTHU281309 BT9727_1691BT9727_1285BT9727_1286BT9727_1287BT9727_1284BT9727_1282BT9727_1691BT9727_1282BT9727_1691
BTHA271848 BTH_II0013BTH_I2173BTH_II0674BTH_II0672BTH_II0673BTH_I1050BTH_I1046BTH_I1045BTH_I1046
BSUB BSU04000BSU28310BSU28270BSU28260BSU28250BSU28280BSU28300BSU28310BSU28300BSU28310
BSP376 BRADO2534BRADO4946BRADO0353BRADO0374BRADO0365BRADO5528BRADO5564BRADO5562BRADO5564
BSP36773 BCEP18194_B3173BCEP18194_A5178BCEP18194_B2131BCEP18194_B2133BCEP18194_B2132BCEP18194_A5587BCEP18194_A5591BCEP18194_A5592BCEP18194_A5591
BPUM315750 BPUM_0399BPUM_2472BPUM_2468BPUM_2467BPUM_2466BPUM_2469BPUM_2471BPUM_2472BPUM_2471BPUM_2472
BPSE320373 BURPS668_A0015BURPS668_2259BURPS668_A2451BURPS668_A2454BURPS668_A2452BURPS668_1279BURPS668_1275BURPS668_1274BURPS668_1275
BPSE320372 BURPS1710B_B1784BURPS1710B_A2625BURPS1710B_B0915BURPS1710B_B0918BURPS1710B_B0916BURPS1710B_A1505BURPS1710B_A1500BURPS1710B_A1499BURPS1710B_A1500
BPSE272560 BPSS0011BPSL1452BPSS1705BPSS1707BPSS1706BPSL1201BPSL1197BPSL1196BPSL1197
BMAL320389 BMA10247_A0014BMA10247_0396BMA10247_A0523BMA10247_A0520BMA10247_A0522BMA10247_0401BMA10247_0397BMA10247_0396BMA10247_0397
BMAL320388 BMASAVP1_1159BMASAVP1_A1113BMASAVP1_1643BMASAVP1_1641BMASAVP1_1642BMASAVP1_A1118BMASAVP1_A1114BMASAVP1_A1113BMASAVP1_A1114
BLIC279010 BL03389BL00608BL00612BL00613BL00615BL00611BL00609BL00608BL00609BL00608
BJAP224911 BLR2916BLR3166BLL0504BLR0488BLR0495BLL6435BLL6503BLL6501BLL6503
BCLA66692 ABC0841ABC2645ABC2641ABC2640ABC2639ABC2642ABC2645ABC2644ABC2645
BCER572264 BCA_1452BCA_1456BCA_1457BCA_1458BCA_1455BCA_1453BCA_1856BCA_1453BCA_1856
BCER405917 BCE_1517BCE_1521BCE_1522BCE_1523BCE_1520BCE_1518BCE_1934BCE_1518BCE_1934
BCER315749 BCER98_0765BCER98_1120BCER98_1124BCER98_1125BCER98_1126BCER98_1123BCER98_1121BCER98_1120BCER98_1121BCER98_1120
BCER288681 BCE33L1282BCE33L1286BCE33L1287BCE33L1288BCE33L1285BCE33L1283BCE33L1666BCE33L1283BCE33L1666
BCER226900 BC_1777BC_1401BC_1402BC_1403BC_1400BC_1398BC_1777BC_1398BC_1777
BCEN331272 BCEN2424_5707BCEN2424_1878BCEN2424_3952BCEN2424_3949BCEN2424_3951BCEN2424_2259BCEN2424_2264BCEN2424_2265BCEN2424_2264
BCEN331271 BCEN_5152BCEN_6201BCEN_4415BCEN_4418BCEN_4416BCEN_1648BCEN_1653BCEN_1654BCEN_1653
BANT592021 BAA_1919BAA_1488BAA_1489BAA_1490BAA_1487BAA_1485BAA_1919BAA_1485BAA_1919
BANT568206 BAMEG_2742BAMEG_3174BAMEG_3173BAMEG_3172BAMEG_3175BAMEG_3177BAMEG_2742BAMEG_3177BAMEG_2742
BANT261594 GBAA1850GBAA1421GBAA1422GBAA1423GBAA1420GBAA1418GBAA1850GBAA1418GBAA1850
BANT260799 BAS1714BAS1312BAS1313BAS1314BAS1311BAS1309BAS1714BAS1309BAS1714
BAMY326423 RBAM_006090RBAM_025370RBAM_025330RBAM_025320RBAM_025310RBAM_025340RBAM_025360RBAM_025370RBAM_025360RBAM_025370
BAMB398577 BAMMC406_3119BAMMC406_1787BAMMC406_3847BAMMC406_3844BAMMC406_3846BAMMC406_2176BAMMC406_2180BAMMC406_2181BAMMC406_2180
BAMB339670 BAMB_4976BAMB_1815BAMB_3343BAMB_3340BAMB_3342BAMB_2298BAMB_2302BAMB_2303BAMB_2302
AVAR240292 AVA_2757AVA_2987AVA_3967AVA_3966AVA_2111AVA_2035AVA_2757AVA_2035AVA_2757
ASP62928 AZO3860AZO1041AZO1039AZO1040AZO3162AZO1035AZO3154AZO3155AZO1034
ASAL382245 ASA_3410ASA_3404ASA_3410ASA_3411ASA_3412ASA_3409ASA_3403ASA_3404ASA_3403ASA_0119
APLE434271 APJL_0458APJL_0729APJL_0458APJL_0140APJL_0139APJL_0414APJL_0730APJL_0729APJL_0730APJL_0099
APLE416269 APL_0432APL_0727APL_0432APL_0139APL_0138APL_0393APL_0728APL_0727APL_0728
AMAR329726 AM1_3085AM1_0898AM1_4505AM1_0904AM1_0705AM1_2118AM1_3085AM1_2118AM1_3085
AHYD196024 AHA_0881AHA_0887AHA_0881AHA_0880AHA_0879AHA_0882AHA_0889AHA_0887AHA_0889AHA_4204
ADEH290397 ADEH_2070ADEH_1978ADEH_2070ADEH_1980ADEH_1979ADEH_1981ADEH_1977ADEH_1978ADEH_1977ADEH_1978
ACRY349163 ACRY_0647ACRY_1157ACRY_2147ACRY_2149ACRY_2148ACRY_0534ACRY_2832ACRY_2833ACRY_2832
ABOR393595 ABO_0510ABO_0481ABO_1467ABO_1470ABO_1469ABO_0638ABO_0482ABO_0481ABO_0482


Organism features enriched in list (features available for 161 out of the 169 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Anthrax 0.005659844
Disease:Bubonic_plague 0.000414266
Disease:Dysentery 0.000414266
Disease:Food_poisoning 0.002148779
Disease:Gastroenteritis 0.00002341113
Endospores:No 3.487e-831211
GC_Content_Range4:0-40 1.884e-1224213
GC_Content_Range4:40-60 7.529e-1196224
GC_Content_Range7:30-40 1.739e-624166
GC_Content_Range7:40-50 0.000369047117
GC_Content_Range7:50-60 3.835e-649107
Genome_Size_Range5:0-2 6.469e-159155
Genome_Size_Range5:2-4 1.550e-729197
Genome_Size_Range5:4-6 1.868e-23102184
Genome_Size_Range5:6-10 0.00405262147
Genome_Size_Range9:1-2 9.653e-119128
Genome_Size_Range9:2-3 6.870e-615120
Genome_Size_Range9:4-5 5.169e-84996
Genome_Size_Range9:5-6 1.840e-125388
Genome_Size_Range9:6-8 0.00369741838
Gram_Stain:Gram_Neg 3.716e-7118333
Gram_Stain:Gram_Pos 9.724e-622150
Habitat:Host-associated 2.678e-634206
Habitat:Multiple 0.004887861178
Habitat:Terrestrial 0.00218651631
Motility:No 8.174e-818151
Motility:Yes 1.079e-9106267
Optimal_temp.:- 0.000035692257
Oxygen_Req:Aerobic 0.001438437185
Oxygen_Req:Anaerobic 2.423e-114102
Oxygen_Req:Facultative 1.165e-1394201
Shape:Coccus 9.030e-7682
Shape:Rod 1.969e-11130347



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 153
Effective number of orgs (counting one per cluster within 468 clusters): 112

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 71
SSOL273057 ncbi Sulfolobus solfataricus P21
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SMAR399550 ncbi Staphylothermus marinus F10
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97901
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PAER178306 ncbi Pyrobaculum aerophilum IM21
PACN267747 ncbi Propionibacterium acnes KPA1712020
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
MXAN246197 ncbi Myxococcus xanthus DK 16221
MSYN262723 ncbi Mycoplasma synoviae 530
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MART243272 ncbi Mycoplasma arthritidis 158L3-10
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM0
ILOI283942 ncbi Idiomarina loihiensis L2TR1
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FRANT ncbi Francisella tularensis tularensis SCHU S40
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF81
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CDIF272563 ncbi Clostridium difficile 6301
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BQUI283165 ncbi Bartonella quintana Toulouse0
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0


Names of the homologs of the genes in the group in each of these orgs
  G6986   EG11583   EG11577   EG11576   EG11575   EG11226   EG10502   EG10500   EG10499   EG10494   
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TVOL273116
TPEN368408
TPAL243276
TLET416591
TKOD69014
TDEN243275
TACI273075
STOK273063 ST0538
SSOL273057 SSO2407
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SMAR399550
SAGA211110
SAGA208435
SAGA205921
SACI330779 SACI_0940
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199 GRAORF_2433
RAKA293614
PTOR263820 PTO0913
PPEN278197
PISL384616 PISL_1814
PINT246198
PHOR70601
PGIN242619
PAST100379
PARS340102 PARS_2063
PAER178306 PAE1993
PACN267747
OTSU357244
NSEN222891
MXAN246197 MXAN_1283
MSYN262723
MSED399549 MSED_0623
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MHYO295358
MHYO262722
MHYO262719
MGEN243273
MFLO265311
MCAP340047
MART243272
LSAK314315
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668
LJOH257314
LINT363253
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LACI272621
ILOI283942 IL0861
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HDUC233412
HBUT415426
HACI382638
FTUL418136
FTUL393115
FRANT
FNUC190304
FNOD381764
FMAG334413
ERUM302409
ERUM254945
EFAE226185
ECHA205920
ECAN269484
DNOD246195
CTRA471473
CTRA471472
CTET212717
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380
CPER195103
CPER195102
CNOV386415
CMUR243161
CMAQ397948 CMAQ_1171
CKOR374847 KCR_0193
CFEL264202
CDIF272563 CD0992
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT536232
CBOT515621
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CABO218497
BTUR314724
BQUI283165
BHER314723
BGAR290434
BCIC186490
BBUR224326
BBAC360095
BBAC264462
BAFZ390236
AYEL322098
AURANTIMONAS
APHA212042
APER272557
AORE350688
AMAR234826
ALAI441768


Organism features enriched in list (features available for 143 out of the 153 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00280413392
Arrangment:Pairs 0.001557616112
Disease:Botulism 0.000841655
Disease:Legionnaire's_disease 0.003505744
Disease:None 0.0002338458
Disease:Pharyngitis 0.000011388
Disease:Wide_range_of_infections 1.433e-71111
Disease:bronchitis_and_pneumonitis 0.000011388
Endospores:No 0.004094064211
GC_Content_Range4:0-40 5.798e-22101213
GC_Content_Range4:40-60 0.000492739224
GC_Content_Range4:60-100 7.291e-173145
GC_Content_Range7:0-30 4.773e-143547
GC_Content_Range7:30-40 8.862e-866166
GC_Content_Range7:50-60 2.504e-69107
GC_Content_Range7:60-70 3.707e-153134
Genome_Size_Range5:0-2 1.366e-3295155
Genome_Size_Range5:4-6 8.892e-215184
Genome_Size_Range5:6-10 0.0000162147
Genome_Size_Range9:0-1 3.355e-82027
Genome_Size_Range9:1-2 9.632e-2275128
Genome_Size_Range9:4-5 6.758e-8596
Gram_Stain:Gram_Neg 0.002313668333
Habitat:Aquatic 6.998e-6791
Habitat:Host-associated 3.951e-1387206
Habitat:Multiple 0.000064826178
Habitat:Specialized 0.00967032053
Habitat:Terrestrial 0.0069566231
Motility:Yes 0.000027145267
Optimal_temp.:- 0.001861649257
Optimal_temp.:37 2.376e-951106
Pathogenic_in:Human 5.322e-777213
Pathogenic_in:No 1.082e-632226
Salinity:Non-halophilic 0.002668237106
Shape:Rod 0.002957772347
Shape:Sphere 5.459e-71519
Temp._range:Hyperthermophilic 0.00247061223



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 48
Effective number of orgs (counting one per cluster within 468 clusters): 45

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
PMAR74547 ncbi Prochlorococcus marinus MIT 9313 1.083e-664410
PMAR59920 ncbi Prochlorococcus marinus NATL2A 0.00001385399
PMAR167555 ncbi Prochlorococcus marinus NATL1A 0.00001655509
TELO197221 ncbi Thermosynechococcus elongatus BP-1 0.000023487410
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H 0.00003223838
SSP321327 ncbi Synechococcus sp. JA-3-3Ab 0.000054195010
TTHE300852 ncbi Thermus thermophilus HB8 0.000056495410
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13) 0.000058895810
TTHE262724 ncbi Thermus thermophilus HB27 0.000060196010
CJEJ360109 ncbi Campylobacter jejuni doylei 269.97 0.00010316759
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 11168 0.00012226889
MKAN190192 ncbi Methanopyrus kandleri AV19 0.00014172907
SSP1131 Synechococcus sp. CC9605 0.00014257009
CJEJ407148 ncbi Campylobacter jejuni jejuni 81116 0.00016587129
MLEP272631 ncbi Mycobacterium leprae TN 0.00017354748
SSP64471 ncbi Synechococcus sp. CC9311 0.00017437169
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S85 0.00020717309
AFUL224325 ncbi Archaeoglobus fulgidus DSM 4304 0.00024804968
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00027947559
SSUI391296 ncbi Streptococcus suis 98HAH33 0.00038187829
MAEO419665 ncbi Methanococcus aeolicus Nankai-3 0.00046043447
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP1375 0.00053505478
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 2661 0.00077373717
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 23779 0.0011760129110
MTHE349307 ncbi Methanosaeta thermophila PT 0.00127343997
CMET456442 ncbi Candidatus Methanoregula boonei 6A8 0.00155924117
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum) 0.00180416398
SELO269084 ncbi Synechococcus elongatus PCC 6301 0.00198739429
SSP1148 ncbi Synechocystis sp. PCC 6803 0.00222249549
CJEJ195099 ncbi Campylobacter jejuni RM1221 0.00270136738
MAER449447 ncbi Microcystis aeruginosa NIES-843 0.00286919829
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS 0.0032447644
MBUR259564 ncbi Methanococcoides burtonii DSM 6242 0.00351044637
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-176 0.00354676978
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C 0.0035926144310
SSP84588 ncbi Synechococcus sp. WH 8102 0.00366707008
STHE292459 ncbi Symbiobacterium thermophilum IAM 14863 0.0038503145310
PMAR167540 Prochlorococcus marinus pastoris MED4ax 0.00461224827
PMAR167542 ncbi Prochlorococcus marinus MIT 9515 0.00508574897
PMAR146891 ncbi Prochlorococcus marinus AS9601 0.00515664907
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA 0.00518657328
OIHE221109 ncbi Oceanobacillus iheyensis HTE831 0.0052634149910
PMAR167546 ncbi Prochlorococcus marinus MIT 9301 0.00552364957
PMAR74546 ncbi Prochlorococcus marinus MIT 9312 0.00632435057
PMAR93060 ncbi Prochlorococcus marinus MIT 9215 0.00694135127
BCER315749 ncbi Bacillus cytotoxicus NVH 391-98 0.0090940158310
SMUT210007 ncbi Streptococcus mutans UA159 0.00972487948
BPUM315750 ncbi Bacillus pumilus SAFR-032 0.0099961159810


Names of the homologs of the genes in the group in each of these orgs
  G6986   EG11583   EG11577   EG11576   EG11575   EG11226   EG10502   EG10500   EG10499   EG10494   
PMAR74547 PMT0531PMT1239PMT0531PMT1844PMT1843PMT1121PMT1176PMT1239PMT1176PMT1239
PMAR59920 PMN2A_0194PMN2A_1858PMN2A_0194PMN2A_1622PMN2A_0686PMN2A_0764PMN2A_1858PMN2A_0764PMN2A_1858
PMAR167555 NATL1_08261NATL1_05831NATL1_08261NATL1_03341NATL1_15201NATL1_16041NATL1_05831NATL1_16041NATL1_05831
TELO197221 TLR1600TLR1296TLR1600TLR0909TLR1234TLL1397TLL0880TLR1296TLL0880TLR1296
MTHE187420 MTH1388MTH1444MTH184MTH1481MTH1443MTH1444MTH1443MTH1444
SSP321327 CYA_1798CYA_2073CYA_1798CYA_0286CYA_2201CYA_2223CYA_2130CYA_2073CYA_2130CYA_2073
TTHE300852 TTHA1378TTHA1213TTHA1230TTHA1228TTHA1229TTHA1210TTHA1212TTHA1213TTHA1212TTHA1213
SSP321332 CYB_1631CYB_0648CYB_1631CYB_0327CYB_2021CYB_1442CYB_0971CYB_0648CYB_0971CYB_0648
TTHE262724 TT_C1012TT_C0852TT_C0867TT_C0865TT_C0866TT_C0849TT_C0851TT_C0852TT_C0851TT_C0852
CJEJ360109 JJD26997_2095JJD26997_2095JJD26997_2094JJD26997_2092JJD26997_2096JJD26997_1095JJD26997_1096JJD26997_1095JJD26997_1096
CJEJ192222 CJ1718CCJ1718CCJ1717CCJ1716CCJ1719CCJ0575CJ0574CJ0575CJ0574
MKAN190192 MK0782MK0531MK0391MK0545MK0531MK0545MK0531
SSP1131 SYNCC9605_1865SYNCC9605_0717SYNCC9605_1865SYNCC9605_0256SYNCC9605_0257SYNCC9605_1939SYNCC9605_1989SYNCC9605_1989SYNCC9605_0717
CJEJ407148 C8J_1624C8J_1624C8J_1623C8J_1622C8J_1625C8J_0537C8J_0536C8J_0537C8J_0536
MLEP272631 ML1691ML1696ML1685ML1684ML1695ML1696ML1695ML1696
SSP64471 GSYN2129GSYN1830GSYN0323GSYN0324GSYN1052GSYN0962GSYN2129GSYN0962GSYN2129
FSUC59374 FSU3213FSU3213FSU0466FSU0467FSU2908FSU3283FSU3284FSU3283FSU3284
AFUL224325 AF_0628AF_1720AF_0628AF_0219AF_1719AF_1720AF_1719AF_1720
CRUT413404 RMAG_0445RMAG_0099RMAG_0372RMAG_0371RMAG_0449RMAG_0446RMAG_0445RMAG_0446RMAG_0445
SSUI391296 SSU98_1953SSU98_1891SSU98_1953SSU98_1952SSU98_1951SSU98_1954SSU98_1891SSU98_1890SSU98_1891
MAEO419665 MAEO_1484MAEO_0682MAEO_0849MAEO_0683MAEO_0682MAEO_0683MAEO_0682
PMAR167539 PRO_0526PRO_0862PRO_0288PRO_1134PRO_1251PRO_0526PRO_1251PRO_0526
MJAN243232 MJ_0720MJ_0277MJ_1195MJ_0161MJ_0277MJ_0161MJ_0277
HAUR316274 HAUR_4439HAUR_4449HAUR_4439HAUR_4441HAUR_4440HAUR_4446HAUR_4448HAUR_4449HAUR_4448HAUR_4449
MTHE349307 MTHE_0025MTHE_0110MTHE_1298MTHE_0111MTHE_0110MTHE_0111MTHE_0110
CMET456442 MBOO_2077MBOO_1443MBOO_1442MBOO_1444MBOO_1443MBOO_1444MBOO_1443
BSP107806 BU226BUPL05BUPL06BUPL07BUPL04BU225BU226BU225
SELO269084 SYC1366_CSYC2490_CSYC2197_DSYC1562_CSYC0145_DSYC1672_CSYC1366_CSYC1672_CSYC1366_C
SSP1148 SLR2088SLR1517SLL1470SLL1444SLR0186SLL0065SLR2088SLL0065SLR2088
CJEJ195099 CJE_1888CJE_1887CJE_1886CJE_1889CJE_0678CJE_0677CJE_0678CJE_0677
MAER449447 MAE_50700MAE_00210MAE_53130MAE_36900MAE_54460MAE_48120MAE_50700MAE_48120MAE_50700
CSUL444179 SMGWSS_040SMGWSS_042SMGWSS_041SMGWSS_043
MBUR259564 MBUR_1632MBUR_0710MBUR_0711MBUR_0709MBUR_0710MBUR_0709MBUR_0710
CJEJ354242 CJJ81176_0016CJJ81176_0015CJJ81176_0014CJJ81176_0017CJJ81176_0603CJJ81176_0602CJJ81176_0603CJJ81176_0602
ADEH290397 ADEH_2070ADEH_1978ADEH_2070ADEH_1980ADEH_1979ADEH_1981ADEH_1977ADEH_1978ADEH_1977ADEH_1978
SSP84588 SYNW0784OR1664SYNW0262OR1282SYNW0263OR1283SYNW0730OR1620SYNW0680OR1970SYNW1746OR2980SYNW0680OR1970SYNW1746OR2980
STHE292459 STH2344STH2684STH3035STH2116STH2115STH2687STH2689STH2684STH2689STH2684
PMAR167540 PMM0786PMM0256PMM1066PMM1154PMM0526PMM1154PMM0526
PMAR167542 P9515ORF_0836P9515ORF_0300P9515ORF_1208P9515ORF_1381P9515ORF_0626P9515ORF_1381P9515ORF_0626
PMAR146891 A9601_08501A9601_02781A9601_11711A9601_13311A9601_05821A9601_13311A9601_05821
CVES412965 COSY_0103COSY_0350COSY_0349COSY_0415COSY_0412COSY_0411COSY_0412COSY_0411
OIHE221109 OB0661OB2623OB2619OB2618OB2617OB2620OB2622OB2623OB2622OB2623
PMAR167546 P9301ORF_0863P9301ORF_0282P9301ORF_1193P9301ORF_1367P9301ORF_0565P9301ORF_1367P9301ORF_0565
PMAR74546 PMT9312_0794PMT9312_0258PMT9312_1077PMT9312_1253PMT9312_0526PMT9312_1253PMT9312_0526
PMAR93060 P9215_08811P9215_02801P9215_12011P9215_13601P9215_06071P9215_13601P9215_06071
BCER315749 BCER98_0765BCER98_1120BCER98_1124BCER98_1125BCER98_1126BCER98_1123BCER98_1121BCER98_1120BCER98_1121BCER98_1120
SMUT210007 SMU_231SMU_1383SMU_1382SMU_1381SMU_1384SMU_231SMU_232SMU_231
BPUM315750 BPUM_0399BPUM_2472BPUM_2468BPUM_2467BPUM_2466BPUM_2469BPUM_2471BPUM_2472BPUM_2471BPUM_2472


Organism features enriched in list (features available for 46 out of the 48 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.00931893112
Disease:Food_poisoning 0.000233159
Genome_Size_Range5:0-2 0.000240023155
Genome_Size_Range5:4-6 0.00002303184
Genome_Size_Range9:1-2 0.000376820128
Genome_Size_Range9:4-5 0.0084609296
Genome_Size_Range9:5-6 0.0034654188
Gram_Stain:Gram_Neg 0.002097917333
Habitat:Aquatic 0.00003441891
Habitat:Host-associated 0.00008055206
Habitat:Multiple 0.00742087178
Optimal_temp.:- 0.001410930257
Oxygen_Req:Facultative 0.00012585201
Oxygen_Req:Microaerophilic 0.0013697618
Pathogenic_in:No 0.004957126226
Salinity:Moderate_halophilic 0.0092472412
Shape:Oval 0.000158845
Shape:Rod 1.431e-612347
Temp._range:Thermophilic 0.0029395835



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-6196 (serine racemization)102760.4715
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181200.4607
GLUTAMINDEG-PWY (glutamine degradation I)1911100.4556
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761040.4511
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3651600.4470
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491260.4308
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491260.4308
GLYOXYLATE-BYPASS (glyoxylate cycle)169980.4235
PWY-561 (superpathway of glyoxylate cycle)162950.4202
GLUCONSUPER-PWY (D-gluconate degradation)2291180.4184
GALACTITOLCAT-PWY (galactitol degradation)73570.4175
AST-PWY (arginine degradation II (AST pathway))120780.4161
GLYCOLATEMET-PWY (glycolate and glyoxylate degradation I)2701300.4135
PWY-5837 (1,4-dihydroxy-2-naphthoate biosynthesis I)2281170.4133
PWY-5340 (sulfate activation for sulfonation)3851600.4128
PWY-6406 (salicylate biosynthesis I)1881030.4090
GLUTDEG-PWY (glutamate degradation II)1941050.4083
PWY-6374 (vibriobactin biosynthesis)77580.4071
PWY-5386 (methylglyoxal degradation I)3051390.4063
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111400.4017
PWY0-901 (selenocysteine biosynthesis I (bacteria))2301160.4010



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11583   EG11577   EG11576   EG11575   EG11226   EG10502   EG10500   EG10499   EG10494   
G69860.9989840.9996840.9993970.9993640.9993660.9989580.9990580.9992420.998616
EG115830.9989610.9988580.9988040.9995050.9998790.9999670.999950.999872
EG115770.9999440.9999640.9997770.9985030.9989320.9991550.998847
EG115760.9999970.9996380.9989110.9989120.9991340.998729
EG115750.9996150.9988980.9988670.9991260.998735
EG112260.9995470.9996520.9997320.999398
EG105020.9999660.9999940.999868
EG1050010.999972
EG104990.999938
EG10494



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PAIRWISE BLAST SCORES:

  G6986   EG11583   EG11577   EG11576   EG11575   EG11226   EG10502   EG10500   EG10499   EG10494   
G69860.0f0-8.9e-50-------
EG11583-0.0f0-----2.4e-79--
EG11577--0.0f0-------
EG11576---0.0f0------
EG11575----0.0f0-----
EG11226-----0.0f0----
EG10502------0.0f0-9.4e-7-
EG10500-------0.0f0--
EG10499--------0.0f0-
EG10494---------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- LEUSYN-PWY (leucine biosynthesis) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.400, average score: 0.956)
  Genes in pathway or complex:
   *in cand* 0.9994 0.9985 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
             0.9952 0.9916 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.7281 0.3213 EG11040 (tyrB) TYRB-MONOMER (TyrB)
   *in cand* 0.9996 0.9994 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9993 0.9987 EG11575 (leuD) LEUD-MONOMER (LeuD)
   *in cand* 0.9994 0.9987 EG11576 (leuC) LEUC-MONOMER (LeuC)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9986 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9996 0.9991 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
   *in cand* 0.9995 0.9985 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9995 0.9988 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9993 0.9986 G6986 (dmlA) G6986-MONOMER (D-malate dehydrogenase (decarboxylating))

- ACETOLACTSYNI-CPLX (acetohydroxybutanoate synthase / acetolactate synthase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.200, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9985 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9994 0.9986 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9991 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
   *in cand* 0.9996 0.9994 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9993 0.9987 EG11575 (leuD) LEUD-MONOMER (LeuD)
   *in cand* 0.9994 0.9987 EG11576 (leuC) LEUC-MONOMER (LeuC)
   *in cand* 0.9994 0.9985 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
   *in cand* 0.9995 0.9988 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9993 0.9986 G6986 (dmlA) G6986-MONOMER (D-malate dehydrogenase (decarboxylating))

- BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.800, average score: 0.935)
  Genes in pathway or complex:
   *in cand* 0.9993 0.9987 EG11575 (leuD) LEUD-MONOMER (LeuD)
   *in cand* 0.9994 0.9987 EG11576 (leuC) LEUC-MONOMER (LeuC)
   *in cand* 0.9996 0.9994 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
             0.7281 0.3213 EG11040 (tyrB) TYRB-MONOMER (TyrB)
   *in cand* 0.9994 0.9985 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
             0.9132 0.6127 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
             0.7452 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
   *in cand* 0.9995 0.9985 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9994 0.9986 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9996 0.9991 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
             0.9992 0.9981 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
             0.9952 0.9916 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.9980 0.9957 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9988 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9993 0.9986 G6986 (dmlA) G6986-MONOMER (D-malate dehydrogenase (decarboxylating))

- THREOCAT-PWY (superpathway of threonine metabolism) (degree of match pw to cand: 0.167, degree of match cand to pw: 0.400, average score: 0.637)
  Genes in pathway or complex:
             0.3683 0.1415 M014 (mhpF) MHPF-MONOMER (acetaldehyde dehydrogenase 2)
             0.2042 0.0285 EG10031 (adhE) ADHE-MONOMER (AdhE)
             0.4170 0.1541 G6455 (ltaE) LTAA-MONOMER (LtaA)
             0.6992 0.1618 EG13139 (tynA) AMINEOXID-MONOMER (TynA)
             0.5556 0.2922 EG10512 (kbl) AKBLIG-MONOMER (Kbl)
             0.6321 0.3808 EG10027 (ackA) ACETATEKINA-MONOMER (propionate kinase / acetate kinase)
             0.7652 0.5959 EG11172 (tdcD) PROPKIN-MONOMER (propionate kinase)
             0.4740 0.1263 EG20173 (pta) PHOSACETYLTRANS-MONOMER (Pta)
             0.2693 0.0574 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
             0.2865 0.0574 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
             0.8890 0.4574 EG10990 (tdcB) THREDEHYDCAT-MONOMER (TdcB)
             0.9132 0.6127 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
             0.7452 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
   *in cand* 0.9995 0.9985 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9994 0.9986 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9996 0.9991 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
             0.9992 0.9981 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
             0.9952 0.9916 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.9980 0.9957 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.6759 0.3719 EG11904 (gldA) GLYCDEH-MONOMER (GldA)
             0.7976 0.5870 EG10993 (tdh) THREODEHYD-MONOMER (Tdh)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9994 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9993 0.9987 EG11575 (leuD) LEUD-MONOMER (LeuD)
   *in cand* 0.9994 0.9987 EG11576 (leuC) LEUC-MONOMER (LeuC)
   *in cand* 0.9994 0.9985 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
   *in cand* 0.9995 0.9988 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9993 0.9986 G6986 (dmlA) G6986-MONOMER (D-malate dehydrogenase (decarboxylating))

- VALSYN-PWY (valine biosynthesis) (degree of match pw to cand: 0.400, degree of match cand to pw: 0.400, average score: 0.972)
  Genes in pathway or complex:
             0.9980 0.9957 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.9952 0.9916 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.9992 0.9981 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
   *in cand* 0.9995 0.9985 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9994 0.9986 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
             0.7452 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
   *in cand* 0.9996 0.9991 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9994 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9993 0.9987 EG11575 (leuD) LEUD-MONOMER (LeuD)
   *in cand* 0.9994 0.9987 EG11576 (leuC) LEUC-MONOMER (LeuC)
   *in cand* 0.9994 0.9985 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
   *in cand* 0.9995 0.9988 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9993 0.9986 G6986 (dmlA) G6986-MONOMER (D-malate dehydrogenase (decarboxylating))

- ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.200, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9991 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9986 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9995 0.9985 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9996 0.9994 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9993 0.9987 EG11575 (leuD) LEUD-MONOMER (LeuD)
   *in cand* 0.9994 0.9987 EG11576 (leuC) LEUC-MONOMER (LeuC)
   *in cand* 0.9994 0.9985 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
   *in cand* 0.9995 0.9988 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9993 0.9986 G6986 (dmlA) G6986-MONOMER (D-malate dehydrogenase (decarboxylating))

- 3-ISOPROPYLMALISOM-CPLX (isopropylmalate isomerase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.200, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9993 0.9987 EG11575 (leuD) LEUD-MONOMER (LeuD)
   *in cand* 0.9994 0.9987 EG11576 (leuC) LEUC-MONOMER (LeuC)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9986 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9996 0.9991 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
   *in cand* 0.9995 0.9985 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9996 0.9994 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9994 0.9985 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
   *in cand* 0.9995 0.9988 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9993 0.9986 G6986 (dmlA) G6986-MONOMER (D-malate dehydrogenase (decarboxylating))

- ILEUSYN-PWY (isoleucine biosynthesis I (from threonine)) (degree of match pw to cand: 0.364, degree of match cand to pw: 0.400, average score: 0.973)
  Genes in pathway or complex:
             0.9980 0.9957 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.9952 0.9916 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.9992 0.9981 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
   *in cand* 0.9996 0.9991 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
   *in cand* 0.9995 0.9985 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9994 0.9986 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
             0.7452 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
             0.9132 0.6127 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9994 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9993 0.9987 EG11575 (leuD) LEUD-MONOMER (LeuD)
   *in cand* 0.9994 0.9987 EG11576 (leuC) LEUC-MONOMER (LeuC)
   *in cand* 0.9994 0.9985 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
   *in cand* 0.9995 0.9988 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9993 0.9986 G6986 (dmlA) G6986-MONOMER (D-malate dehydrogenase (decarboxylating))



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11226 EG11575 EG11576 EG11577 (centered at EG11577)
EG10499 EG10500 (centered at EG10499)
EG11583 (centered at EG11583)
G6986 (centered at G6986)
EG10494 EG10502 (centered at EG10494)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6986   EG11583   EG11577   EG11576   EG11575   EG11226   EG10502   EG10500   EG10499   EG10494   
305/623322/623399/623384/623380/623373/623329/623387/623410/623344/623
AAEO224324:0:Tyes01570--1305-1571138157
AAUR290340:2:Tyes111006-10-212221-
AAVE397945:0:Tyes957-0211860186318641863-
ABAC204669:0:Tyes--2103--192193
ABAU360910:0:Tyes0481788079-480481480-
ABOR393595:0:Tyes300100710101009159101-
ABUT367737:0:Tyes555-555--0699698699698
ACAU438753:0:Tyes-32190380137973277-209920982099
ACEL351607:0:Tyes40-884883-1010
ACRY349163:8:Tyes1116211620162216210231023112310-
ADEH290397:0:Tyes931933240101
AEHR187272:0:Tyes0-7367347356254-54-
AFER243159:0:Tyes--5021880187801759176017591760
AFUL224325:0:Tyes4001482400--01481148214811482
AHYD196024:0:Tyes282103108103201
AMAR329726:9:Tyes-2355189376519601397235513972355
AMET293826:0:Tyes824-55--58190318
ANAE240017:0:Tyes4--128129-0-0-
APLE416269:0:Tyes29758929710257590589590-
APLE434271:0:Tno34459634439383055975965970
ASAL382245:5:Tyes3165315931653166316731643158315931580
ASP1667:3:Tyes141182-10-222322-
ASP232721:2:Tyes1061-1417141314165101-
ASP62928:0:Tyes2865-75621571214921500
ASP62977:0:Tyes--402-245524562455-
ASP76114:2:Tyes--75613851137113720
AVAR240292:3:Tyes-721951193419337607210721
BABO262698:0:Tno--0-7-----
BABO262698:1:Tno-1-491---101
BAMB339670:2:Tno1630-302-----
BAMB339670:3:Tno-0---504508509508-
BAMB398577:2:Tno0-723720722-----
BAMB398577:3:Tno-0---403407408407-
BAMY326423:0:Tyes0192619221921192019231925192619251926
BANT260799:0:Tno-401345204010401
BANT261594:2:Tno-393345203930393
BANT568206:2:Tyes-042142041942242404240
BANT592021:2:Tno-423345204230423
BAPH198804:0:Tyes-1----010-
BAPH372461:0:Tyes-------10-
BBRO257310:0:Tyes24301765201-176428611764-
BCAN483179:0:Tno--7-0-----
BCAN483179:1:Tno-1-510---101
BCEN331271:0:Tno-0--------
BCEN331271:1:Tno732-031-----
BCEN331271:2:Tno-----0565-
BCEN331272:2:Tyes1754-302-----
BCEN331272:3:Tyes-0---381386387386-
BCER226900:1:Tyes-373345203730373
BCER288681:0:Tno-0456313801380
BCER315749:1:Tyes0341345346347344342341342341
BCER405917:1:Tyes-0456313981398
BCER572264:1:Tno-0456313931393
BCLA66692:0:Tyes018421838183718361839-184218411842
BFRA272559:1:Tyes--0324----
BFRA295405:0:Tno--0324----
BHAL272558:0:Tyes0-20032002200120042006-2006-
BHEN283166:0:Tyes-------0-0
BJAP224911:0:Fyes2449269915075990-605860566058
BLIC279010:0:Tyes772621035656
BLON206672:0:Tyes920--960961-0-0-
BMAL243160:0:Tno0-163816411639-----
BMAL243160:1:Tno-1----010-
BMAL320388:0:Tno0-471469470-----
BMAL320388:1:Tno-0---5101-
BMAL320389:0:Tyes0-499496498-----
BMAL320389:1:Tyes-0---5101-
BMEL224914:0:Tno--0-7-----
BMEL224914:1:Tno-479-0---479480479
BMEL359391:0:Tno--0-7-----
BMEL359391:1:Tno-1-468---101
BOVI236:0:Tyes--7-0-----
BOVI236:1:Tyes-1-----101
BPAR257311:0:Tno20401416201-141523411415-
BPER257313:0:Tyes13470626624625-101-
BPET94624:0:Tyes14830144132071442-101-
BPSE272560:0:Tyes0-167816801679-----
BPSE272560:1:Tyes-268---5101-
BPSE320372:0:Tno868-031-----
BPSE320372:1:Tno-1109---6101-
BPSE320373:0:Tno0-241024132411-----
BPSE320373:1:Tno-952---5101-
BPUM315750:0:Tyes0208620822081208020832085208620852086
BSP107806:1:Tyes--1230----
BSP107806:2:Tyes-1----010-
BSP36773:1:Tyes1044-021-----
BSP36773:2:Tyes-0---426430431430-
BSP376:0:Tyes20524355016104910-494549434945
BSUB:0:Tyes0256525612560255925622564256525642565
BSUI204722:0:Tyes--7-0-----
BSUI204722:1:Tyes-1-495---101
BSUI470137:0:Tno--7-0-----
BSUI470137:1:Tno-1-297---101
BTHA271848:0:Tno0-656654655-----
BTHA271848:1:Tno-1097---5101-
BTHE226186:0:Tyes--0324----
BTHU281309:1:Tno-407345204070407
BTHU412694:1:Tno-0456313511351
BTRI382640:1:Tyes-------0-0
BVIE269482:6:Tyes0-655652654-----
BVIE269482:7:Tyes-0---537541542541-
BWEI315730:4:Tyes-0456313801380
BXEN266265:1:Tyes1378-13650-----
CACE272562:1:Tyes--2---7-70
CAULO:0:Tyes-19320321369-193219331932
CBEI290402:0:Tyes4-4---2400-02399
CBLO203907:0:Tyes--2103---459
CBLO291272:0:Tno--2103---471
CBOT508765:1:Tyes--3---368-0369
CCHL340177:0:Tyes040----424
CCON360104:2:Tyes369-369--5821010
CCUR360105:0:Tyes378-378--0525524525524
CDES477974:0:Tyes8920892--31010
CDIF272563:1:Tyes--0-------
CDIP257309:0:Tyes70-2829--010
CEFF196164:0:Fyes180-6768-1010
CFET360106:0:Tyes203-203--5171010
CGLU196627:0:Tyes140-4546-1010
CHOM360107:1:Tyes-663761--0-663664663
CHUT269798:0:Tyes--3120----
CHYD246194:0:Tyes707--41010
CJAP155077:0:Tyes-0104210401041-101-
CJEI306537:0:Tyes7689-10--898889
CJEJ192222:0:Tyes1120-11201119111811211010
CJEJ195099:0:Tno--11691168116711701010
CJEJ354242:2:Tyes--10741073107210751010
CJEJ360109:0:Tyes929-9299289279300101
CJEJ407148:0:Tno1120-11201119111811211010
CKLU431943:1:Tyes1069-1069--107253605360
CKOR374847:0:Tyes-----0----
CMAQ397948:0:Tyes-----0----
CMET456442:0:Tyes6451---02121
CMIC31964:2:Tyes100-616615-1010
CMIC443906:2:Tyes100-254255-1010
CPEL335992:0:Tyes-02472492481382-0--
CPHY357809:0:Tyes--333--14803220322
CPSY167879:0:Tyes288-9339349359321011556
CRUT413404:0:Tyes-3220255254326323322323322
CSAL290398:0:Tyes2321-199519971996-101-
CSP501479:2:Fyes0---------
CSP501479:7:Fyes-----0----
CSP501479:8:Fyes-2031802--203120322031
CSP78:2:Tyes--0321275-316031623160
CSUL444179:0:Tyes--0213----
CTEP194439:0:Tyes030----323
CVES412965:0:Tyes--0236235295292291292291
CVIO243365:0:Tyes--2242224822469101-
DARO159087:0:Tyes-765302222076422242223765
DDES207559:0:Tyes-18002872--28681180017990
DETH243164:0:Tyes-70--46767
DGEO319795:0:Tyes-0--------
DGEO319795:1:Tyes--431--02-23
DHAF138119:0:Tyes-28345---1117010
DOLE96561:0:Tyes1860186--4101-
DPSY177439:2:Tyes015240---1525152415251524
DRAD243230:3:Tyes--292--0---33
DRED349161:0:Tyes707--42630013
DSHI398580:5:Tyes708-042525-17251727-
DSP216389:0:Tyes-70--4-767
DSP255470:0:Tno-70--4-767
DVUL882:1:Tyes261110112611--26071101110120
ECAR218491:0:Tyes414563221021
ECOL199310:0:Tno3516320444159104508
ECOL316407:0:Tno173642721033526673525
ECOL331111:6:Tno187044921033942563943
ECOL362663:0:Tno249021033795673878
ECOL364106:1:Tno2493121034134784229
ECOL405955:2:Tyes541254063664893745
ECOL409438:6:Tyes193347021033954894057
ECOL413997:0:Tno169538921033501673502
ECOL439855:4:Tno126346021033840783929
ECOL469008:0:Tno1822310235033504350535021349934980
ECOL481805:0:Tno1814309835683569357035670356435634232
ECOL585034:0:Tno177543421033727783831
ECOL585035:0:Tno242121033890673980
ECOL585055:0:Tno189344921034018784119
ECOL585056:2:Tno202447821034128684225
ECOL585057:0:Tno1196721034198784199
ECOL585397:0:Tno243521034164784255
ECOL83334:0:Tno248450221034638674735
ECOLI:0:Tno176543721033667673668
ECOO157:0:Tno252449821034657674753
EFER585054:1:Tyes2621033831673832
ELIT314225:0:Tyes1023-102320--454453454
ESP42895:1:Tyes60861160860760660916116120
FALN326424:0:Tyes1422-10-21222122
FJOH376686:0:Tyes0-0321589---1586
FPHI484022:1:Tyes--201-----
FSP106370:0:Tyes1422-10-21222122
FSP1855:0:Tyes80-2324-1010
FSUC59374:0:Tyes2670-26700123732739274027392740
FTUL351581:0:Tno---10-----
FTUL393011:0:Tno---10-----
FTUL401614:0:Tyes--021-----
FTUL458234:0:Tno---10-----
GBET391165:0:Tyes--2062082070-98-
GFOR411154:0:Tyes-173120---17
GKAU235909:1:Tyes2621035656
GMET269799:1:Tyes-6590--664660659660659
GOXY290633:5:Tyes--0211528-891892-
GSUL243231:0:Tyes-5971--04545
GTHE420246:1:Tyes787621035656
GURA351605:0:Tyes-26630--26582662266326622663
GVIO251221:0:Tyes-217224492314231511700217202172
HARS204773:0:Tyes27410833831832857853852853-
HAUR316274:2:Tyes0100217910910
HCHE349521:0:Tyes-336620133553365336633654284
HHAL349124:0:Tyes135-11271129112804-4-
HHEP235279:0:Tyes--283---0101
HINF281310:0:Tyes12641230265264265-
HINF374930:0:Tyes2611261260259262010-
HINF71421:0:Tno15841230583584583-
HMAR272569:8:Tyes8--4512391-10
HMOD498761:0:Tyes64656--346646502
HMUK485914:1:Tyes2642--2639264002636-2636-
HNEP81032:0:Tyes--014031009380-391389391
HSOM205914:1:Tyes248-248247246249---0
HSOM228400:0:Tno716-716715714717---0
HWAL362976:1:Tyes1369--1367-01365-1365-
IHOS453591:0:Tyes0----1----
ILOI283942:0:Tyes0---------
JSP290400:1:Tyes--51303562-178917851789
JSP375286:0:Tyes87401821182418221797180118021801-
KPNE272620:2:Tyes196389389088988889108938941
KRAD266940:2:Fyes1027-10-26-2627
LBIF355278:2:Tyes--67001217710-710711
LBIF456481:2:Tno--69001220730-730731
LBOR355276:1:Tyes--2732242254121-10
LBOR355277:1:Tno--6927417402461-10
LCHO395495:0:Tyes1880054354154217781782178317821783
LINN272626:1:Tno--4563-010
LINT189518:1:Tyes--5701107478479478479
LINT267671:1:Tno--3524054043101011327
LLAC272622:5:Tyes8085-11-0-0
LLAC272623:0:Tyes--023---7-
LMES203120:1:Tyes--2103----
LMON169963:0:Tno--4563-010
LMON265669:0:Tyes--4563-010
LSPH444177:1:Tyes011011097109610951098-110111001101
LWEL386043:0:Tyes--4563-010
LXYL281090:0:Tyes321327-01-326327326-
MABS561007:1:Tyes112932-10-31323132
MACE188937:0:Tyes03484---42953483348434833484
MAEO419665:0:Tyes7940---1651010
MAER449447:0:Tyes-508705332369254654825508748255087
MAQU351348:2:Tyes1310066967167015741011215
MAVI243243:0:Tyes6--10-11-11-
MBAR269797:1:Tyes11200---7251010
MBOV233413:0:Tno1019-10-18191819
MBOV410289:0:Tno1019-10-18191819
MBUR259564:0:Tyes8761---20101
MCAP243233:0:Tyes-194021198195194195194
MEXT419610:0:Tyes4399-2243406502392-457945814579
MFLA265072:0:Tyes--1184118611850160015991600-
MGIL350054:3:Tyes915-10-14151415
MHUN323259:0:Tyes-1---20101
MJAN243232:2:Tyes575121---106001210121
MKAN190192:0:Tyes403143---0157143157143
MLAB410358:0:Tyes-2---03232
MLEP272631:0:Tyes610-10-910910
MLOT266835:2:Tyes53910322231273228--944943944
MMAG342108:0:Tyes0331893891892336-331332331
MMAR267377:0:Tyes-0---4161010
MMAR368407:0:Tyes-1---02121
MMAR394221:0:Tyes--0214---6
MMAR402880:1:Tyes-415---0414415414415
MMAR426368:0:Tyes-1390---01391-13911390
MMAR444158:0:Tyes-1---13920101
MMAZ192952:0:Tyes8401---6340101
MPET420662:1:Tyes018481905190719061844-18481847-
MSED399549:0:Tyes-----0----
MSME246196:0:Tyes03457-397398-385384385384
MSP164756:1:Tno6720-1718-1010
MSP164757:0:Tno7260-1718-1010
MSP189918:2:Tyes6700-1718-1010
MSP266779:1:Tyes0---------
MSP266779:3:Tyes-0189819651785--010
MSP400668:0:Tyes1794-780778779-101-
MSP409:2:Tyes4998-635175001341-184183184
MSTA339860:0:Tyes14421---1710-0-
MSUC221988:0:Tyes52674631047457467451674
MTBCDC:0:Tno1020-10-19201920
MTBRV:0:Tno1018-10-17181718
MTHE187420:0:Tyes120312590--12961258125912581259
MTHE264732:0:Tyes060--35656
MTHE349307:0:Tyes084---125085848584
MTUB336982:0:Tno816-10-15161516
MTUB419947:0:Tyes1019-10-18191819
MVAN350058:0:Tyes70-1516-1010
MXAN246197:0:Tyes0---------
NARO279238:0:Tyes1797-152303--110811091108
NEUR228410:0:Tyes-647302642646647646-
NEUT335283:2:Tyes-11630299115116115-
NFAR247156:2:Tyes12251237-12151214-1236123712360
NGON242231:0:Tyes--053152493494493-
NHAM323097:2:Tyes-78418318370-767
NMEN122586:0:Tno--05338517518517-
NMEN122587:0:Tyes--1611571590463464463-
NMEN272831:0:Tno--1241201220386387386-
NMEN374833:0:Tno--1751701720486487486-
NMUL323848:3:Tyes--1452145514530202120-
NOCE323261:1:Tyes-14791189401475147814791478-
NPHA348780:2:Tyes787--7897880792-792-
NSP103690:6:Tyes-3335010510435663349333533493335
NSP35761:1:Tyes7296-10-95969596
NSP387092:0:Tyes0830--68484838483
NWIN323098:0:Tyes-54624524580-545
OANT439375:4:Tyes--0-10-----
OANT439375:5:Tyes-0-482---136813691368
OCAR504832:0:Tyes1650229010031025-101910201019
OIHE221109:0:Tyes0199119871986198519881990199119901991
PABY272844:0:Tyes505--2----
PAER178306:0:Tyes-----0----
PAER208963:0:Tyes-1716301-3147314831473148
PAER208964:0:Tno-0163516381637-3239324032393240
PARC259536:0:Tyes-0881884883-1010
PARS340102:0:Tyes-----0----
PATL342610:0:Tyes260202674267526762673101-
PCAR338963:0:Tyes060--35656
PCRY335284:1:Tyes-0104310461045-1010
PDIS435591:0:Tyes--0435----
PENT384676:0:Tyes46420201-2889289028892890
PFLU205922:0:Tyes3050305302303-3233323432333234
PFLU216595:1:Tyes21490230123042303-328232833282-
PFLU220664:0:Tyes19210351348349-3495349634953496
PFUR186497:0:Tyes50---2----
PHAL326442:0:Tyes------010-
PHAL326442:1:Tyes110-110109108111---0
PING357804:0:Tyes-30351891138313840303630353036131
PISL384616:0:Tyes-----0----
PLUM243265:0:Fyes919101180101039
PLUT319225:0:Tyes1-1--0-636
PMAR146891:0:Tyes--5700-89110513031051303
PMAR167539:0:Tyes-2515920-868985251985251
PMAR167540:0:Tyes--5460-830921284921284
PMAR167542:0:Tyes--5250-89510663161066316
PMAR167546:0:Tyes--5700-89810692741069274
PMAR167555:0:Tyes5012605010-120212862601286260
PMAR59920:0:Tno0169901453-49957716995771699
PMAR74546:0:Tyes--5470-83310132781013278
PMAR74547:0:Tyes0710013381337593647710647710
PMAR93060:0:Tyes--6150-93810993391099339
PMEN399739:0:Tyes-1812175817601759018171817
PMOB403833:0:Tyes060--35656
PMUL272843:1:Tyes109211092109110901093010759
PNAP365044:8:Tyes0-14201418141991888788-
PPRO298386:2:Tyes218542103109103165
PPUT160488:0:Tno32302301-268126822681-
PPUT351746:0:Tyes21900219034652192-2982298329822983
PPUT76869:0:Tno6912354301-318331843183-
PRUM264731:0:Tyes--4120----
PSP117:0:Tyes0-49424976497750323428-34285117
PSP296591:2:Tyes75022271286128412855101-
PSP312153:0:Tyes274310302305309310309-
PSP56811:2:Tyes-0134013421341-101-
PSTU379731:0:Tyes213322011458147514761475-
PSYR205918:0:Tyes15560114811461147-101-
PSYR223283:2:Tyes16660118611841185-101-
PTHE370438:0:Tyes-37--4209010
PTOR263820:0:Tyes-----0----
RALB246199:0:Tyes------0---
RCAS383372:0:Tyes190511032710-10-
RDEN375451:4:Tyes3339-23620913-24132414-
RETL347834:4:Tyes0---------
RETL347834:5:Tyes-1129211641290--101
REUT264198:2:Tyes0---------
REUT264198:3:Tyes-23711376137913776101-
REUT381666:2:Tyes03029207420762075556551550551-
RFER338969:1:Tyes4541529021552153015291530-
RLEG216596:4:Tyes0---------
RLEG216596:6:Tyes-1146613141464--101
RMET266264:1:Tyes---0------
RMET266264:2:Tyes030302059-2060514508507508-
RPAL258594:0:Tyes1524181301381828-181318141813
RPAL316055:0:Tyes-1840148071860-184018421840
RPAL316056:0:Tyes4410302913033009-302930273029
RPAL316057:0:Tyes1363161901481633-161916211619
RPAL316058:0:Tyes3313303301373018-303330323033
RPOM246200:1:Tyes--065206-231323142313
RRUB269796:1:Tyes--720718719--010
RSAL288705:0:Tyes170-747746-101-
RSOL267608:0:Tyes0---------
RSOL267608:1:Tyes-131802185899089-
RSP101510:2:Fyes0---------
RSP101510:3:Fyes-2485-10-5743574257435742
RSP357808:0:Tyes0905895898897902904-904-
RSPH272943:3:Tyes0---------
RSPH272943:4:Tyes--1580158515830-309308309
RSPH349101:1:Tno0---------
RSPH349101:2:Tno-2901526153115290-290289290
RSPH349102:5:Tyes-10053011422-10051004-
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