CANDIDATE ID: 140

CANDIDATE ID: 140

NUMBER OF GENES: 10
AVERAGE SCORE:    9.9962991e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    9.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- RUVB (ruvB) (b1860)
   Products of gene:
     - EG10924-MONOMER (branch migration of Holliday structures; repair helicase)
     - RUVABC-CPLX (resolvasome)
       Reactions:
        DNA combined with exogenous DNA to form a recombinational junction  =  resolution of recombinational junction formation of two intact strands

- RUVA (ruvA) (b1861)
   Products of gene:
     - EG10923-MONOMER (branch migration of Holliday structures; repair)
     - RUVABC-CPLX (resolvasome)
       Reactions:
        DNA combined with exogenous DNA to form a recombinational junction  =  resolution of recombinational junction formation of two intact strands

- EG12854 (ybgF) (b0742)
   Products of gene:
     - EG12854-MONOMER (predicted periplasmic protein)
     - CPLX0-2201 (The Tol-Pal Cell Envelope Complex)
     - CPLX0-2221 (The Colicin A Import System)
     - CPLX0-2202 (Colicin S4 Transport System)

- EG11110 (ybgC) (b0736)
   Products of gene:
     - EG11110-MONOMER (esterase/thioesterase)
       Reactions:
        1,4-dihydroxy-2-naphthoyl-CoA + H2O  ->  1,4-dihydroxy-2-naphthoate + coenzyme A + H+
         In pathways
         PWY-5850 (PWY-5850)
         PWY-5840 (PWY-5840)
         PWY-5845 (PWY-5845)
         PWY-5860 (PWY-5860)
         PWY-5862 (PWY-5862)
         PWY-5838 (superpathway of menaquinone-8 biosynthesis I)
         PWY-5896 (PWY-5896)
         PWY-5897 (PWY-5897)
         PWY-5898 (PWY-5898)
         PWY-5899 (PWY-5899)
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         PWY-5861 (PWY-5861)
         PWY-5863 (PWY-5863)
         PWY-5837 (1,4-dihydroxy-2-naphthoate biosynthesis I)
         PWY-5791 (PWY-5791)

- EG11011 (tolR) (b0738)
   Products of gene:
     - EG11011-MONOMER (TolR)
     - CPLX0-2201 (The Tol-Pal Cell Envelope Complex)
     - CPLX0-2221 (The Colicin A Import System)
     - CPLX0-2202 (Colicin S4 Transport System)

- EG11010 (tolQ) (b0737)
   Products of gene:
     - EG11010-MONOMER (TolQ)
     - CPLX0-2201 (The Tol-Pal Cell Envelope Complex)
     - CPLX0-2221 (The Colicin A Import System)
     - CPLX0-2202 (Colicin S4 Transport System)

- EG11008 (tolB) (b0740)
   Products of gene:
     - EG11008-MONOMER (TolB)
     - CPLX0-2201 (The Tol-Pal Cell Envelope Complex)
     - CPLX0-2221 (The Colicin A Import System)
     - CPLX0-2202 (Colicin S4 Transport System)

- EG10925 (ruvC) (b1863)
   Products of gene:
     - EG10925-MONOMER (Holliday junction nuclease; resolution of structures; repair)
     - RUVABC-CPLX (resolvasome)
       Reactions:
        DNA combined with exogenous DNA to form a recombinational junction  =  resolution of recombinational junction formation of two intact strands

- EG10684 (pal) (b0741)
   Products of gene:
     - EG10684-MONOMER (Pal)
     - CPLX0-2201 (The Tol-Pal Cell Envelope Complex)
     - CPLX0-2221 (The Colicin A Import System)
     - CPLX0-2202 (Colicin S4 Transport System)

- EG10271 (exbB) (b3006)
   Products of gene:
     - EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
     - CPLX0-1923 (TonB energy transducing system)
     - CPLX0-1943 (Outer Membrane Ferric Citrate Transport System)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[periplasmic space]
     - CPLX0-2001 (ferric dicitrate uptake system)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[cytosol]
     - CPLX0-1942 (Outer Membrane Ferrichrome Transport System)
       Reactions:
        iron (III) hydroxamate complex[extracellular space]  ->  iron (III) hydroxamate complex[periplasmic space]
     - CPLX0-1981 (ferrichrome uptake system)
       Reactions:
        iron (III) hydroxamate complex[extracellular space]  ->  iron (III) hydroxamate complex[cytosol]
     - CPLX0-1941 (Outer Membrane Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[periplasmic space]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]
     - CPLX0-1924 (Vitamin B12 outer membrane transport complex)
       Reactions:
        cobinamide[extracellular space]  ->  cobinamide[periplasmic space]
        cob(I)alamin[extracellular space]  ->  cob(I)alamin[periplasmic space]
     - CPLX0-1862 (vitamin B12 transport system)
       Reactions:
        cob(I)alamin[extracellular space]  ->  cob(I)alamin[cytosol]



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ORGANISMS CONTAINING AT LEAST 9 GENES FROM THE GROUP:

Total number of orgs: 219
Effective number of orgs (counting one per cluster within 468 clusters): 155

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 3175810
YPSE273123 ncbi Yersinia pseudotuberculosis IP 3295310
YPES386656 ncbi Yersinia pestis Pestoides F10
YPES377628 ncbi Yersinia pestis Nepal51610
YPES360102 ncbi Yersinia pestis Antiqua10
YPES349746 ncbi Yersinia pestis Angola10
YPES214092 ncbi Yersinia pestis CO9210
YPES187410 ncbi Yersinia pestis KIM 1010
YENT393305 ncbi Yersinia enterocolitica enterocolitica 808110
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A9
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110189
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103319
XFAS405440 ncbi Xylella fastidiosa M129
XFAS183190 ncbi Xylella fastidiosa Temecula19
XFAS160492 ncbi Xylella fastidiosa 9a5c9
XCAM487884 Xanthomonas campestris pv. paulliniae9
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-109
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80049
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339139
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3069
XAUT78245 ncbi Xanthobacter autotrophicus Py210
VVUL216895 ncbi Vibrio vulnificus CMCP69
VVUL196600 ncbi Vibrio vulnificus YJ01610
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 221063310
VFIS312309 ncbi Vibrio fischeri ES11410
VEIS391735 ncbi Verminephrobacter eiseniae EF01-210
VCHO345073 ncbi Vibrio cholerae O3959
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N1696110
TTUR377629 ncbi Teredinibacter turnerae T790110
TDEN292415 ncbi Thiobacillus denitrificans ATCC 2525910
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT210
SSP94122 ncbi Shewanella sp. ANA-310
SSP644076 Silicibacter sp. TrichCH4B9
SSP292414 ncbi Ruegeria sp. TM10409
SSON300269 ncbi Shigella sonnei Ss04610
SSED425104 ncbi Shewanella sediminis HAW-EB310
SPRO399741 ncbi Serratia proteamaculans 56810
SPEA398579 ncbi Shewanella pealeana ATCC 70034510
SONE211586 ncbi Shewanella oneidensis MR-110
SMEL266834 ncbi Sinorhizobium meliloti 102110
SMED366394 ncbi Sinorhizobium medicae WSM41910
SLOI323850 ncbi Shewanella loihica PV-410
SHAL458817 ncbi Shewanella halifaxensis HAW-EB410
SGLO343509 ncbi Sodalis glossinidius morsitans10
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB10
SFLE373384 ncbi Shigella flexneri 5 str. 840110
SFLE198214 ncbi Shigella flexneri 2a str. 30110
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL47610
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B6710
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 915010
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT1810
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty210
SDYS300267 ncbi Shigella dysenteriae Sd19710
SDEN318161 ncbi Shewanella denitrificans OS21710
SDEG203122 ncbi Saccharophagus degradans 2-409
SBOY300268 ncbi Shigella boydii Sb22710
SBAL402882 ncbi Shewanella baltica OS18510
SBAL399599 ncbi Shewanella baltica OS19510
SACI56780 ncbi Syntrophus aciditrophicus SB10
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170259
RSOL267608 ncbi Ralstonia solanacearum GMI100010
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111709
RPAL316058 ncbi Rhodopseudomonas palustris HaA210
RPAL316057 ncbi Rhodopseudomonas palustris BisB510
RPAL316056 ncbi Rhodopseudomonas palustris BisB1810
RPAL316055 ncbi Rhodopseudomonas palustris BisA5310
RPAL258594 ncbi Rhodopseudomonas palustris CGA00910
RMET266264 ncbi Ralstonia metallidurans CH3410
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38419
RFER338969 ncbi Rhodoferax ferrireducens T11810
REUT381666 ncbi Ralstonia eutropha H1610
REUT264198 ncbi Ralstonia eutropha JMP13410
RETL347834 ncbi Rhizobium etli CFN 4210
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC300010
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a10
PSTU379731 ncbi Pseudomonas stutzeri A150110
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-110
PSP296591 ncbi Polaromonas sp. JS66610
PPUT76869 ncbi Pseudomonas putida GB-110
PPUT351746 ncbi Pseudomonas putida F110
PPUT160488 ncbi Pseudomonas putida KT244010
PPRO298386 ncbi Photobacterium profundum SS910
PNAP365044 ncbi Polaromonas naphthalenivorans CJ210
PMUL272843 ncbi Pasteurella multocida multocida Pm709
PMEN399739 ncbi Pseudomonas mendocina ymp10
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO110
PING357804 ncbi Psychromonas ingrahamii 3710
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1259
PFLU220664 ncbi Pseudomonas fluorescens Pf-510
PFLU216595 ncbi Pseudomonas fluorescens SBW2510
PFLU205922 ncbi Pseudomonas fluorescens Pf0-110
PENT384676 ncbi Pseudomonas entomophila L4810
PCRY335284 ncbi Psychrobacter cryohalolentis K59
PCAR338963 ncbi Pelobacter carbinolicus DSM 238010
PATL342610 ncbi Pseudoalteromonas atlantica T6c10
PARC259536 ncbi Psychrobacter arcticus 273-49
PAER208964 ncbi Pseudomonas aeruginosa PAO110
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA1410
OCAR504832 ncbi Oligotropha carboxidovorans OM510
OANT439375 ncbi Ochrobactrum anthropi ATCC 4918810
NWIN323098 ncbi Nitrobacter winogradskyi Nb-25510
NOCE323261 ncbi Nitrosococcus oceani ATCC 1970710
NMUL323848 ncbi Nitrosospira multiformis ATCC 2519610
NHAM323097 ncbi Nitrobacter hamburgensis X1410
NEUT335283 ncbi Nitrosomonas eutropha C9110
NEUR228410 ncbi Nitrosomonas europaea ATCC 1971810
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124449
MXAN246197 ncbi Myxococcus xanthus DK 162210
MSP409 Methylobacterium sp.10
MSP400668 ncbi Marinomonas sp. MWYL19
MSP266779 ncbi Chelativorans sp. BNC110
MPET420662 ncbi Methylibium petroleiphilum PM110
MMAG342108 ncbi Magnetospirillum magneticum AMB-110
MLOT266835 ncbi Mesorhizobium loti MAFF30309910
MFLA265072 ncbi Methylobacillus flagellatus KT10
MEXT419610 ncbi Methylobacterium extorquens PA19
MCAP243233 ncbi Methylococcus capsulatus Bath10
MAQU351348 ncbi Marinobacter aquaeolei VT810
LPNE400673 ncbi Legionella pneumophila Corby10
LPNE297246 ncbi Legionella pneumophila Paris10
LPNE297245 ncbi Legionella pneumophila Lens10
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 110
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-009
LCHO395495 ncbi Leptothrix cholodnii SP-610
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 7857810
JSP375286 ncbi Janthinobacterium sp. Marseille10
JSP290400 ncbi Jannaschia sp. CCS19
ILOI283942 ncbi Idiomarina loihiensis L2TR10
HSOM228400 ncbi Haemophilus somnus 23369
HSOM205914 ncbi Haemophilus somnus 129PT9
HINF71421 ncbi Haemophilus influenzae Rd KW209
HINF374930 ncbi Haemophilus influenzae PittEE9
HINF281310 ncbi Haemophilus influenzae 86-028NP9
HHAL349124 ncbi Halorhodospira halophila SL19
HDUC233412 ncbi Haemophilus ducreyi 35000HP9
HCHE349521 ncbi Hahella chejuensis KCTC 239610
HARS204773 ncbi Herminiimonas arsenicoxydans10
GURA351605 ncbi Geobacter uraniireducens Rf410
GSUL243231 ncbi Geobacter sulfurreducens PCA10
GMET269799 ncbi Geobacter metallireducens GS-1510
GBET391165 ncbi Granulibacter bethesdensis CGDNIH19
ESP42895 Enterobacter sp.10
EFER585054 ncbi Escherichia fergusonii ATCC 3546910
ECOL83334 Escherichia coli O157:H710
ECOL585397 ncbi Escherichia coli ED1a10
ECOL585057 ncbi Escherichia coli IAI3910
ECOL585056 ncbi Escherichia coli UMN02610
ECOL585055 ncbi Escherichia coli 5598910
ECOL585035 ncbi Escherichia coli S8810
ECOL585034 ncbi Escherichia coli IAI110
ECOL481805 ncbi Escherichia coli ATCC 873910
ECOL469008 ncbi Escherichia coli BL21(DE3)10
ECOL439855 ncbi Escherichia coli SMS-3-510
ECOL413997 ncbi Escherichia coli B str. REL60610
ECOL409438 ncbi Escherichia coli SE1110
ECOL405955 ncbi Escherichia coli APEC O110
ECOL364106 ncbi Escherichia coli UTI8910
ECOL362663 ncbi Escherichia coli 53610
ECOL331111 ncbi Escherichia coli E24377A10
ECOL316407 ncbi Escherichia coli K-12 substr. W311010
ECOL199310 ncbi Escherichia coli CFT07310
ECAR218491 ncbi Pectobacterium atrosepticum SCRI104310
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough9
DSHI398580 ncbi Dinoroseobacter shibae DFL 1210
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G2010
DARO159087 ncbi Dechloromonas aromatica RCB10
CVIO243365 ncbi Chromobacterium violaceum ATCC 124729
CTEP194439 ncbi Chlorobium tepidum TLS9
CSP78 Caulobacter sp.10
CSP501479 Citreicella sp. SE459
CSAL290398 ncbi Chromohalobacter salexigens DSM 304310
CPSY167879 ncbi Colwellia psychrerythraea 34H10
CJAP155077 Cellvibrio japonicus9
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-11110
CBUR360115 ncbi Coxiella burnetii RSA 33110
CBUR227377 ncbi Coxiella burnetii RSA 49310
CAULO ncbi Caulobacter crescentus CB159
BVIE269482 ncbi Burkholderia vietnamiensis G410
BTHA271848 ncbi Burkholderia thailandensis E26410
BSUI470137 ncbi Brucella suis ATCC 2344510
BSUI204722 ncbi Brucella suis 133010
BSP376 Bradyrhizobium sp.10
BSP36773 Burkholderia sp.10
BPSE320373 ncbi Burkholderia pseudomallei 66810
BPSE320372 ncbi Burkholderia pseudomallei 1710b10
BPSE272560 ncbi Burkholderia pseudomallei K9624310
BPET94624 Bordetella petrii10
BPER257313 ncbi Bordetella pertussis Tohama I10
BPAR257311 ncbi Bordetella parapertussis 1282210
BOVI236 Brucella ovis10
BMEL359391 ncbi Brucella melitensis biovar Abortus 230810
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M10
BMAL320389 ncbi Burkholderia mallei NCTC 1024710
BMAL320388 ncbi Burkholderia mallei SAVP110
BMAL243160 ncbi Burkholderia mallei ATCC 2334410
BJAP224911 ncbi Bradyrhizobium japonicum USDA 11010
BCEN331272 ncbi Burkholderia cenocepacia HI242410
BCEN331271 ncbi Burkholderia cenocepacia AU 105410
BCAN483179 ncbi Brucella canis ATCC 2336510
BBRO257310 ncbi Bordetella bronchiseptica RB5010
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1009
BAMB398577 ncbi Burkholderia ambifaria MC40-610
BAMB339670 ncbi Burkholderia ambifaria AMMD10
BABO262698 ncbi Brucella abortus bv. 1 str. 9-94110
ASP76114 ncbi Aromatoleum aromaticum EbN110
ASP62977 ncbi Acinetobacter sp. ADP110
ASP62928 ncbi Azoarcus sp. BH7210
ASP232721 ncbi Acidovorax sp. JS4210
ASAL382245 ncbi Aeromonas salmonicida salmonicida A44910
APLE416269 ncbi Actinobacillus pleuropneumoniae L209
AHYD196024 Aeromonas hydrophila dhakensis10
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 2327010
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-19
ACRY349163 ncbi Acidiphilium cryptum JF-59
ACAU438753 ncbi Azorhizobium caulinodans ORS 57110
ABOR393595 ncbi Alcanivorax borkumensis SK210
ABAU360910 ncbi Bordetella avium 197N9
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin34510
AAVE397945 ncbi Acidovorax citrulli AAC00-110


Names of the homologs of the genes in the group in each of these orgs
  RUVB   RUVA   EG12854   EG11110   EG11011   EG11010   EG11008   EG10925   EG10684   EG10271   
YPSE349747 YPSIP31758_2030YPSIP31758_2031YPSIP31758_2866YPSIP31758_2872YPSIP31758_2870YPSIP31758_2871YPSIP31758_2868YPSIP31758_2032YPSIP31758_2867YPSIP31758_0591
YPSE273123 YPTB2041YPTB2040YPTB1161YPTB1155YPTB1157YPTB1156YPTB1159YPTB2039YPTB1160YPTB3383
YPES386656 YPDSF_1064YPDSF_1065YPDSF_2570YPDSF_2576YPDSF_2574YPDSF_2575YPDSF_2572YPDSF_1066YPDSF_2571YPDSF_0466
YPES377628 YPN_1535YPN_1534YPN_2872YPN_2878YPN_2876YPN_2877YPN_2874YPN_1533YPN_2873YPN_0539
YPES360102 YPA_1441YPA_1440YPA_0604YPA_0598YPA_0600YPA_0599YPA_0602YPA_1438YPA_0603YPA_3110
YPES349746 YPANGOLA_A2420YPANGOLA_A2421YPANGOLA_A1399YPANGOLA_A3047YPANGOLA_A1395YPANGOLA_A1394YPANGOLA_A1397YPANGOLA_A2423YPANGOLA_A1398YPANGOLA_A0268
YPES214092 YPO2058YPO2057YPO1126YPO1120YPO1122YPO1121YPO1124YPO2056YPO1125YPO0682
YPES187410 Y2252Y2253Y3053Y3059Y3057Y3058Y3055Y2254Y3054Y3495
YENT393305 YE2392YE2393YE2930YE2936YE2934YE2935YE2932YE2394YE2931YE3646
XORY360094 XOOORF_3306XOOORF_3308XOOORF_3299XOOORF_3305XOOORF_3303XOOORF_3304XOOORF_3301XOOORF_3309XOOORF_3300
XORY342109 XOO1547XOO1545XOO1554XOO1548XOO1550XOO1549XOO1552XOO1544XOO1553
XORY291331 XOO1663XOO1661XOO1670XOO1664XOO1666XOO1665XOO1668XOO1660XOO1669
XFAS405440 XFASM12_1063XFASM12_1061XFASM12_1070XFASM12_1064XFASM12_1066XFASM12_1065XFASM12_1068XFASM12_1060XFASM12_1069
XFAS183190 PD_0889PD_0887PD_0896PD_0890PD_0892PD_0891PD_0894PD_0886PD_0895
XFAS160492 XF1902XF1904XF1895XF1901XF1899XF1900XF1897XF1905XF1896
XCAM487884 XCC-B100_1174XCC-B100_1171XCC-B100_1181XCC-B100_1175XCC-B100_1177XCC-B100_1176XCC-B100_1179XCC-B100_1170XCC-B100_1180
XCAM316273 XCAORF_3345XCAORF_3348XCAORF_3338XCAORF_3344XCAORF_3342XCAORF_3343XCAORF_3340XCAORF_3349XCAORF_3339
XCAM314565 XC_1136XC_1133XC_1143XC_1137XC_1139XC_1138XC_1141XC_1132XC_1142
XCAM190485 XCC3023XCC3025XCC3016XCC3022XCC3020XCC3021XCC3018XCC3026XCC3017
XAXO190486 XAC3147XAC3149XAC3140XAC3146XAC3144XAC3145XAC3142XAC3150XAC3141
XAUT78245 XAUT_3069XAUT_3067XAUT_3081XAUT_3072XAUT_3058XAUT_3059XAUT_3056XAUT_3065XAUT_3080XAUT_4273
VVUL216895 VV1_2159VV1_2172VV1_2166VV1_2168VV1_2167VV1_2170VV1_2157VV1_2171VV1_2167
VVUL196600 VV2284VV2285VV2273VV2279VV2277VV2278VV2275VV2287VV2274VV2278
VPAR223926 VP1052VP1051VP1062VP1056VP1058VP1057VP1060VP1048VP1061VP1057
VFIS312309 VF0952VF0951VF0964VF0957VF0959VF0958VF0962VF0950VF0963VF0958
VEIS391735 VEIS_4070VEIS_4068VEIS_1013VEIS_2533VEIS_4795VEIS_4794VEIS_1011VEIS_2947VEIS_1012VEIS_4794
VCHO345073 VC0395_A1436VC0395_A1437VC0395_A1427VC0395_A1431VC0395_A1432VC0395_A1429VC0395_A1438VC0395_A1428VC0395_A1432
VCHO VC1845VC1846VC1834VC1840VC1838VC1839VC1836VC1847VC1835VC1839
TTUR377629 TERTU_3434TERTU_3435TERTU_3427TERTU_3433TERTU_3431TERTU_3432TERTU_3429TERTU_3436TERTU_3428TERTU_3432
TDEN292415 TBD_2211TBD_2213TBD_2204TBD_2210TBD_2208TBD_2209TBD_2206TBD_2214TBD_2205TBD_2209
STYP99287 STM1894STM1895STM0750STM0744STM0746STM0745STM0748STM1898STM0749STM3159
SSP94122 SHEWANA3_1957SHEWANA3_1956SHEWANA3_2529SHEWANA3_2535SHEWANA3_2533SHEWANA3_2534SHEWANA3_2531SHEWANA3_1955SHEWANA3_2530SHEWANA3_2534
SSP644076 SCH4B_2536SCH4B_2537SCH4B_2533SCH4B_2531SCH4B_2532SCH4B_2529SCH4B_2538SCH4B_2528SCH4B_2532
SSP292414 TM1040_2371TM1040_2372TM1040_2369TM1040_2367TM1040_2368TM1040_2365TM1040_2373TM1040_2364TM1040_2368
SSON300269 SSO_1281SSO_1280SSO_0694SSO_0688SSO_0690SSO_0689SSO_0692SSO_1278SSO_0693SSO_3149
SSED425104 SSED_2034SSED_2033SSED_1859SSED_1853SSED_1855SSED_1854SSED_1857SSED_2032SSED_1858SSED_1854
SPRO399741 SPRO_2776SPRO_2777SPRO_1281SPRO_1275SPRO_1277SPRO_1276SPRO_1279SPRO_2778SPRO_1280SPRO_4211
SPEA398579 SPEA_2362SPEA_2363SPEA_2562SPEA_2568SPEA_2566SPEA_2567SPEA_2564SPEA_2364SPEA_2563SPEA_2567
SONE211586 SO_2429SO_2430SO_2746SO_2752SO_2750SO_2751SO_2748SO_2431SO_2747SO_2751
SMEL266834 SMC03965SMC03966SMC02941SMC03960SMC03957SMC03958SMC04461SMC03967SMC02942SMC02085
SMED366394 SMED_2637SMED_2638SMED_2625SMED_2632SMED_1147SMED_2630SMED_2627SMED_2639SMED_2626SMED_1146
SLOI323850 SHEW_2075SHEW_2076SHEW_1529SHEW_1523SHEW_1525SHEW_1524SHEW_1527SHEW_2077SHEW_1528SHEW_1524
SHAL458817 SHAL_1922SHAL_1921SHAL_1693SHAL_1687SHAL_1689SHAL_1688SHAL_1691SHAL_1920SHAL_1692SHAL_1688
SGLO343509 SG1262SG1261SG0888SG0882SG0884SG0883SG0886SG1260SG0887SG0281
SFUM335543 SFUM_0993SFUM_0994SFUM_0757SFUM_1216SFUM_0753SFUM_0752SFUM_0755SFUM_0995SFUM_0756SFUM_0752
SFLE373384 SFV_1862SFV_1863SFV_0594SFV_0600SFV_0598SFV_0599SFV_0596SFV_1865SFV_0595SFV_3057
SFLE198214 AAN43427.1AAN43428.1AAN42199.1AAN42205.1AAN42203.1AAN42204.1AAN42201.1AAN43430.1AAN42200.1AAN44529.1
SENT454169 SEHA_C2108SEHA_C2109SEHA_C0877SEHA_C0871SEHA_C0873SEHA_C0872SEHA_C0875SEHA_C2112SEHA_C0876SEHA_C3407
SENT321314 SCH_1902SCH_1903SCH_0754SCH_0748SCH_0750SCH_0749SCH_0752SCH_1906SCH_0753SCH_3101
SENT295319 SPA0975SPA0974SPA1993SPA1999SPA1997SPA1998SPA1995SPA0971SPA1994SPA3027
SENT220341 STY2102STY2103STY0796STY0790STY0792STY0791STY0794STY2106STY0795STY3332
SENT209261 T0983T0982T2126T2132T2130T2131T2128T0979T2127T3079
SDYS300267 SDY_1147SDY_1148SDY_0690SDY_0684SDY_0686SDY_0685SDY_0688SDY_1150SDY_0689SDY_3067
SDEN318161 SDEN_1883SDEN_1884SDEN_1396SDEN_1390SDEN_1392SDEN_1391SDEN_1394SDEN_1885SDEN_1395SDEN_1391
SDEG203122 SDE_2533SDE_2534SDE_2527SDE_2531SDE_2532SDE_2529SDE_2535SDE_2528SDE_2532
SBOY300268 SBO_1177SBO_1178SBO_0601SBO_0595SBO_0597SBO_0596SBO_0599SBO_1186SBO_0600SBO_3000
SBAL402882 SHEW185_2303SHEW185_2304SHEW185_1744SHEW185_1738SHEW185_1740SHEW185_1739SHEW185_1742SHEW185_2305SHEW185_1743SHEW185_1739
SBAL399599 SBAL195_2419SBAL195_2420SBAL195_1787SBAL195_1781SBAL195_1783SBAL195_1782SBAL195_1785SBAL195_2421SBAL195_1786SBAL195_1782
SACI56780 SYN_02971SYN_02972SYN_00190SYN_00892SYN_00186SYN_00185SYN_00188SYN_02973SYN_00189SYN_00185
RSPH349102 RSPH17025_1233RSPH17025_1231RSPH17025_0558RSPH17025_0560RSPH17025_0559RSPH17025_0562RSPH17025_1230RSPH17025_0563RSPH17025_2996
RSOL267608 RSC0500RSC0501RSC0737RSC0731RSC0733RSC0732RSC0735RSC0503RSC0736RSC0732
RRUB269796 RRU_A1089RRU_A1096RRU_A1090RRU_A1092RRU_A1091RRU_A1094RRU_A1087RRU_A1095RRU_A1091
RPAL316058 RPB_4269RPB_4271RPB_1816RPB_4268RPB_1810RPB_1809RPB_1812RPB_4272RPB_1815RPB_1241
RPAL316057 RPD_4167RPD_4169RPD_4143RPD_4165RPD_4149RPD_4150RPD_4147RPD_4170RPD_4144RPD_4004
RPAL316056 RPC_4803RPC_4805RPC_4747RPC_1924RPC_4753RPC_4754RPC_4751RPC_4806RPC_4748RPC_0936
RPAL316055 RPE_4767RPE_4769RPE_4701RPE_4763RPE_4709RPE_4710RPE_4707RPE_4770RPE_4702RPE_4579
RPAL258594 RPA1102RPA1100RPA1124RPA1103RPA1118RPA1117RPA1120RPA1099RPA1123RPA3478
RMET266264 RMET_0423RMET_0424RMET_2673RMET_2679RMET_2677RMET_2678RMET_2675RMET_0426RMET_2674RMET_2678
RLEG216596 RL3990RL3967RL3974RL3972RL3973RL3969RL3986RL3968RL3973
RFER338969 RFER_0820RFER_0739RFER_2094RFER_1529RFER_2673RFER_2672RFER_2092RFER_3417RFER_2093RFER_2672
REUT381666 H16_A0497H16_A0498PHG146H16_A2833H16_A2831H16_A2832H16_A2829H16_A0500H16_A2828H16_A2832
REUT264198 REUT_A0483REUT_A0484REUT_A0797REUT_A0791REUT_A0793REUT_A0792REUT_A0795REUT_A0486REUT_A0796REUT_A0792
RETL347834 RHE_CH03482RHE_CH03481RHE_CH03460RHE_CH03467RHE_CH03465RHE_CH03466RHE_CH03462RHE_CH03478RHE_CH03461RHE_CH03466
PSYR223283 PSPTO_3977PSPTO_3978PSPTO_3970PSPTO_3976PSPTO_3974PSPTO_3975PSPTO_3972PSPTO_3979PSPTO_3971PSPTO_0069
PSYR205918 PSYR_1410PSYR_1409PSYR_1417PSYR_1411PSYR_1413PSYR_1412PSYR_1415PSYR_1408PSYR_1416PSYR_0205
PSTU379731 PST_2808PST_2809PST_2801PST_2807PST_2805PST_2806PST_2803PST_2810PST_2802PST_1946
PSP312153 PNUC_1880PNUC_1879PNUC_0273PNUC_1340PNUC_0277PNUC_0278PNUC_0275PNUC_1878PNUC_0274PNUC_0278
PSP296591 BPRO_4093BPRO_4094BPRO_1986BPRO_2889BPRO_2891BPRO_2890BPRO_1984BPRO_1083BPRO_1985BPRO_2890
PPUT76869 PPUTGB1_4201PPUTGB1_4202PPUTGB1_4194PPUTGB1_4200PPUTGB1_4198PPUTGB1_4199PPUTGB1_4196PPUTGB1_4203PPUTGB1_4195PPUTGB1_5354
PPUT351746 PPUT_1246PPUT_1245PPUT_1253PPUT_1247PPUT_1249PPUT_1248PPUT_1251PPUT_1244PPUT_1252PPUT_5215
PPUT160488 PP_1217PP_1216PP_1224PP_1218PP_1220PP_1219PP_1222PP_1215PP_1223PP_5306
PPRO298386 PBPRA1117PBPRA1116PBPRA2548PBPRA2554PBPRA2552PBPRA2553PBPRA2550PBPRA1114PBPRA2549PBPRA2553
PNAP365044 PNAP_0512PNAP_0510PNAP_2048PNAP_2921PNAP_2570PNAP_2922PNAP_2050PNAP_3409PNAP_2049PNAP_2922
PMUL272843 PM0976PM0977PM0971PM0969PM0970PM0967PM0978PM0966PM0970
PMEN399739 PMEN_1272PMEN_1271PMEN_1279PMEN_1273PMEN_1275PMEN_1274PMEN_1277PMEN_1270PMEN_1278PMEN_4062
PLUM243265 PLU2112PLU2111PLU1457PLU1451PLU1453PLU1452PLU1455PLU2110PLU1456PLU3941
PING357804 PING_0719PING_0718PING_0729PING_0723PING_0725PING_0724PING_0727PING_0716PING_0728PING_0724
PHAL326442 PSHAA1875PSHAA1876PSHAA1869PSHAA1873PSHAA1874PSHAA1871PSHAA1877PSHAA1870PSHAA1874
PFLU220664 PFL_4763PFL_4764PFL_4756PFL_4762PFL_4760PFL_4761PFL_4758PFL_4765PFL_4757PFL_6067
PFLU216595 PFLU4913PFLU4914PFLU4906PFLU4912PFLU4910PFLU4911PFLU4908PFLU4915PFLU4907PFLU5999
PFLU205922 PFL_4407PFL_4408PFL_4400PFL_4406PFL_4404PFL_4405PFL_4402PFL_4409PFL_4401PFL_5555
PENT384676 PSEEN4092PSEEN4093PSEEN4085PSEEN4091PSEEN5452PSEEN4090PSEEN4087PSEEN4094PSEEN4086PSEEN5451
PCRY335284 PCRYO_0685PCRYO_0684PCRYO_1191PCRYO_1135PCRYO_1136PCRYO_1133PCRYO_0671PCRYO_1509PCRYO_1136
PCAR338963 PCAR_2338PCAR_2337PCAR_0410PCAR_1492PCAR_2977PCAR_2978PCAR_2975PCAR_2336PCAR_2974PCAR_2978
PATL342610 PATL_2944PATL_2945PATL_2937PATL_2943PATL_2941PATL_2942PATL_2939PATL_2946PATL_2938PATL_2942
PARC259536 PSYC_0710PSYC_0709PSYC_1200PSYC_1251PSYC_1250PSYC_1253PSYC_0699PSYC_0908PSYC_1250
PAER208964 PA0967PA0966PA0974PA0968PA0970PA0969PA0972PA0965PA0973PA0969
PAER208963 PA14_51780PA14_51790PA14_51690PA14_51770PA14_51740PA14_51750PA14_51720PA14_51800PA14_51710PA14_51750
OCAR504832 OCAR_7299OCAR_7301OCAR_7288OCAR_7297OCAR_7292OCAR_7293OCAR_7290OCAR_7302OCAR_7289OCAR_6722
OANT439375 OANT_1213OANT_1212OANT_1221OANT_1214OANT_1216OANT_1215OANT_1218OANT_1211OANT_1220OANT_1254
NWIN323098 NWI_2724NWI_2725NWI_2713NWI_2723NWI_2719NWI_2720NWI_2717NWI_2726NWI_2714NWI_2040
NOCE323261 NOC_0140NOC_0139NOC_0147NOC_0141NOC_0143NOC_0142NOC_0145NOC_0138NOC_0146NOC_0142
NMUL323848 NMUL_A2719NMUL_A2720NMUL_A2712NMUL_A2718NMUL_A2716NMUL_A2717NMUL_A2714NMUL_A2721NMUL_A2713NMUL_A2717
NHAM323097 NHAM_3521NHAM_3522NHAM_3508NHAM_3520NHAM_3514NHAM_3515NHAM_3512NHAM_3523NHAM_3509NHAM_0747
NEUT335283 NEUT_0284NEUT_0283NEUT_0291NEUT_0285NEUT_0287NEUT_0286NEUT_0289NEUT_0282NEUT_0290NEUT_0286
NEUR228410 NE0213NE0212NE0220NE0214NE0216NE0215NE0218NE0211NE0219NE0215
NARO279238 SARO_0423SARO_0422SARO_1013SARO_1015SARO_1014SARO_1017SARO_0421SARO_0388SARO_0390
MXAN246197 MXAN_4969MXAN_4972MXAN_3000MXAN_4456MXAN_5754MXAN_5753MXAN_5756MXAN_4973MXAN_4581MXAN_0275
MSP409 M446_1104M446_0850M446_0281M446_1106M446_0856M446_3390M446_3387M446_2328M446_0280M446_1131
MSP400668 MMWYL1_2190MMWYL1_2189MMWYL1_2196MMWYL1_2192MMWYL1_2191MMWYL1_2194MMWYL1_2188MMWYL1_2195MMWYL1_2191
MSP266779 MESO_3176MESO_3178MESO_3169MESO_3175MESO_3173MESO_3174MESO_3171MESO_3179MESO_3170MESO_3174
MPET420662 MPE_A0327MPE_A3236MPE_A1348MPE_A2953MPE_A2955MPE_A2954MPE_A1346MPE_A0482MPE_A1347MPE_A2954
MMAG342108 AMB3216AMB3218AMB3208AMB3215AMB3213AMB3214AMB3211AMB3219AMB3210AMB3214
MLOT266835 MLL3895MLL3898MLL3886MLL3892MLL3890MLL3891MLL3888MLL3901MLL3887MLL4168
MFLA265072 MFLA_2344MFLA_2353MFLA_2337MFLA_2343MFLA_1558MFLA_2342MFLA_2339MFLA_2354MFLA_2338MFLA_2342
MEXT419610 MEXT_4768MEXT_4842MEXT_4765MEXT_1617MEXT_4763MEXT_4760MEXT_0962MEXT_4843MEXT_1618
MCAP243233 MCA_1223MCA_1222MCA_1231MCA_1224MCA_1227MCA_1226MCA_1229MCA_1221MCA_1230MCA_1226
MAQU351348 MAQU_1704MAQU_1705MAQU_1697MAQU_1703MAQU_1701MAQU_1702MAQU_1699MAQU_1706MAQU_1698MAQU_1702
LPNE400673 LPC_1000LPC_0713LPC_1528LPC_0999LPC_0997LPC_0998LPC_0995LPC_0712LPC_1529LPC_0998
LPNE297246 LPP1534LPP1251LPP2025LPP1533LPP1531LPP1532LPP1529LPP1250LPP2026LPP1532
LPNE297245 LPL1449LPL1251LPL2020LPL1450LPL1452LPL1451LPL1454LPL1250LPL2021LPL1451
LPNE272624 LPG1576LPG1288LPG2042LPG1575LPG1573LPG1574LPG1571LPG1287LPG2043LPG1574
LINT363253 LI1187LI0109LI0724LI0694LI0695LI0692LI0268LI0691LI0695
LCHO395495 LCHO_3954LCHO_3953LCHO_1942LCHO_2940LCHO_0478LCHO_2941LCHO_1944LCHO_0531LCHO_3831LCHO_2941
KPNE272620 GKPORF_B1537GKPORF_B1538GKPORF_B5175GKPORF_B4735GKPORF_B5171GKPORF_B5170GKPORF_B5173GKPORF_B1539GKPORF_B5174GKPORF_B2760
JSP375286 MMA_0311MMA_0310MMA_2469MMA_2463MMA_2465MMA_2464MMA_2467MMA_0309MMA_2468MMA_2464
JSP290400 JANN_0966JANN_0977JANN_0969JANN_0971JANN_0970JANN_0975JANN_0964JANN_0976JANN_0970
ILOI283942 IL1085IL1086IL1078IL1084IL1082IL1083IL1080IL1087IL1079IL1083
HSOM228400 HSM_0143HSM_0142HSM_0131HSM_0133HSM_0132HSM_0135HSM_1762HSM_0136HSM_0132
HSOM205914 HS_0270HS_0269HS_0258HS_0260HS_0259HS_0262HS_0509HS_0263HS_0259
HINF71421 HI_0312HI_0313HI_0386HI_0384HI_0385HI_0382HI_0314HI_0381HI_0385
HINF374930 CGSHIEE_01495CGSHIEE_01490CGSHIEE_01070CGSHIEE_01080CGSHIEE_01075CGSHIEE_01090CGSHIEE_01485CGSHIEE_01095CGSHIEE_01075
HINF281310 NTHI0430NTHI0431NTHI0506NTHI0504NTHI0505NTHI0502NTHI0432NTHI0501NTHI0505
HHAL349124 HHAL_2213HHAL_2212HHAL_2219HHAL_2215HHAL_2214HHAL_2217HHAL_2211HHAL_2218HHAL_2214
HDUC233412 HD_1757HD_1758HD_1778HD_1776HD_1777HD_1773HD_0593HD_1772HD_1777
HCHE349521 HCH_04922HCH_04923HCH_04913HCH_04920HCH_04917HCH_04919HCH_04915HCH_04924HCH_04914HCH_04919
HARS204773 HEAR0258HEAR0257HEAR2409HEAR2403HEAR2405HEAR2404HEAR2407HEAR0256HEAR2408HEAR2404
GURA351605 GURA_1413GURA_1414GURA_3692GURA_4320GURA_0205GURA_0206GURA_0203GURA_1415GURA_0202GURA_0206
GSUL243231 GSU_1077GSU_1076GSU_2552GSU_3461GSU_0027GSU_0028GSU_0025GSU_1075GSU_2305GSU_0028
GMET269799 GMET_0746GMET_0745GMET_3542GMET_3556GMET_3538GMET_3537GMET_3540GMET_0744GMET_3499GMET_3537
GBET391165 GBCGDNIH1_1101GBCGDNIH1_1099GBCGDNIH1_1102GBCGDNIH1_1104GBCGDNIH1_1103GBCGDNIH1_1106GBCGDNIH1_1098GBCGDNIH1_1107GBCGDNIH1_0039
ESP42895 ENT638_2429ENT638_2430ENT638_1240ENT638_1234ENT638_1236ENT638_1235ENT638_1238ENT638_2431ENT638_1239ENT638_3417
EFER585054 EFER_1212EFER_1211EFER_2362EFER_2368EFER_2366EFER_2367EFER_2364EFER_1209EFER_2363EFER_2947
ECOL83334 ECS2570ECS2571ECS0777ECS0771ECS0773ECS0772ECS0775ECS2573ECS0776ECS3890
ECOL585397 ECED1_2065ECED1_2066ECED1_0709ECED1_0703ECED1_0705ECED1_0704ECED1_0707ECED1_2068ECED1_0708ECED1_3656
ECOL585057 ECIAI39_1189ECIAI39_1188ECIAI39_0717ECIAI39_0711ECIAI39_0713ECIAI39_0712ECIAI39_0715ECIAI39_1186ECIAI39_0716ECIAI39_3501
ECOL585056 ECUMN_2158ECUMN_2159ECUMN_0830ECUMN_0824ECUMN_0826ECUMN_0825ECUMN_0828ECUMN_2161ECUMN_0829ECUMN_3491
ECOL585055 EC55989_2039EC55989_2040EC55989_0727EC55989_0721EC55989_0723EC55989_0722EC55989_0725EC55989_2042EC55989_0726EC55989_3423
ECOL585035 ECS88_1917ECS88_1918ECS88_0765ECS88_0759ECS88_0761ECS88_0760ECS88_0763ECS88_1921ECS88_0764ECS88_3387
ECOL585034 ECIAI1_1947ECIAI1_1948ECIAI1_0717ECIAI1_0711ECIAI1_0713ECIAI1_0712ECIAI1_0715ECIAI1_1950ECIAI1_0716ECIAI1_3154
ECOL481805 ECOLC_1772ECOLC_1771ECOLC_2913ECOLC_2919ECOLC_2917ECOLC_2918ECOLC_2915ECOLC_1769ECOLC_2914ECOLC_0689
ECOL469008 ECBD_1778ECBD_1777ECBD_2918ECBD_2924ECBD_2922ECBD_2923ECBD_2920ECBD_1775ECBD_2919ECBD_0733
ECOL439855 ECSMS35_1326ECSMS35_1325ECSMS35_0765ECSMS35_0759ECSMS35_0761ECSMS35_0760ECSMS35_0763ECSMS35_1323ECSMS35_0764ECSMS35_3291
ECOL413997 ECB_01831ECB_01832ECB_00702ECB_00696ECB_00698ECB_00697ECB_00700ECB_01834ECB_00701ECB_02880
ECOL409438 ECSE_2036ECSE_2037ECSE_0802ECSE_0796ECSE_0798ECSE_0797ECSE_0800ECSE_2039ECSE_0801ECSE_3290
ECOL405955 APECO1_910APECO1_911APECO1_1339APECO1_1345APECO1_1343APECO1_1344APECO1_1341APECO1_913APECO1_1340APECO1_3418
ECOL364106 UTI89_C2064UTI89_C2065UTI89_C0739UTI89_C0732UTI89_C0734UTI89_C0733UTI89_C0736UTI89_C2067UTI89_C0738UTI89_C3426
ECOL362663 ECP_1804ECP_1805ECP_0753ECP_0747ECP_0749ECP_0748ECP_0751ECP_1807ECP_0752ECP_3090
ECOL331111 ECE24377A_2090ECE24377A_2091ECE24377A_0771ECE24377A_0765ECE24377A_0767ECE24377A_0766ECE24377A_0769ECE24377A_2093ECE24377A_0770ECE24377A_3475
ECOL316407 ECK1861:JW1849:B1860ECK1862:JW1850:B1861ECK0731:JW0732:B0742ECK0725:JW0726:B0736ECK0727:JW0728:B0738ECK0726:JW0727:B0737ECK0729:JW5100:B0740ECK1864:JW1852:B1863ECK0730:JW0731:B0741ECK2999:JW2974:B3006
ECOL199310 C2274C2275C0822C0815C0817C0816C0819C2277C0821C3741
ECAR218491 ECA2491ECA2492ECA1375ECA1369ECA1371ECA1370ECA1373ECA2493ECA1374ECA0358
DVUL882 DVU_2255DVU_2070DVU_0886DVU_2389DVU_3099DVU_3103DVU_2258DVU_3104DVU_3099
DSHI398580 DSHI_1105DSHI_1104DSHI_1113DSHI_1107DSHI_1109DSHI_1108DSHI_1111DSHI_1103DSHI_1112DSHI_1108
DDES207559 DDE_2322DDE_2323DDE_1580DDE_2735DDE_3630DDE_3629DDE_3632DDE_2324DDE_3633DDE_3629
DARO159087 DARO_4060DARO_4062DARO_4051DARO_4057DARO_4055DARO_4056DARO_4053DARO_4063DARO_4052DARO_4056
CVIO243365 CV_4215CV_4223CV_0111CV_0107CV_0551CV_0109CV_4225CV_0110CV_0551
CTEP194439 CT_0262CT_0640CT_1264CT_0634CT_0633CT_0636CT_1664CT_0638CT_0633
CSP78 CAUL_0786CAUL_0785CAUL_4425CAUL_0787CAUL_0198CAUL_4430CAUL_4427CAUL_0784CAUL_4426CAUL_3581
CSP501479 CSE45_0158CSE45_0159CSE45_3738CSE45_3740CSE45_3739CSE45_3742CSE45_0160CSE45_3743CSE45_3739
CSAL290398 CSAL_1848CSAL_1847CSAL_1855CSAL_1849CSAL_1851CSAL_1850CSAL_1853CSAL_1846CSAL_1854CSAL_1850
CPSY167879 CPS_2117CPS_2116CPS_1733CPS_1727CPS_1729CPS_1728CPS_1731CPS_2115CPS_1732CPS_1728
CJAP155077 CJA_1031CJA_1030CJA_1037CJA_1033CJA_1032CJA_1035CJA_1029CJA_1036CJA_1032
CBUR434922 COXBU7E912_0418COXBU7E912_0420COXBU7E912_2017COXBU7E912_0478COXBU7E912_0412COXBU7E912_0413COXBU7E912_2019COXBU7E912_0421COXBU7E912_2018COXBU7E912_0413
CBUR360115 COXBURSA331_A1756COXBURSA331_A1754COXBURSA331_A0177COXBURSA331_A1689COXBURSA331_A1762COXBURSA331_A1761COXBURSA331_A0175COXBURSA331_A1753COXBURSA331_A0176COXBURSA331_A1761
CBUR227377 CBU_1570CBU_1568CBU_0092CBU_1506CBU_1575CBU_1574CBU_0090CBU_1567CBU_0091CBU_1574
CAULO CC3236CC3228CC3234CC0322CC3233CC3230CC3238CC3229CC2336
BVIE269482 BCEP1808_0653BCEP1808_0654BCEP1808_0730BCEP1808_0736BCEP1808_0734BCEP1808_0735BCEP1808_0732BCEP1808_0655BCEP1808_0731BCEP1808_0735
BTHA271848 BTH_I1247BTH_I1248BTH_I1371BTH_I1377BTH_I1375BTH_I1376BTH_I1373BTH_I1249BTH_I1372BTH_I1376
BSUI470137 BSUIS_B1178BSUIS_B1179BSUIS_B1169BSUIS_B1177BSUIS_B1174BSUIS_B1175BSUIS_B1172BSUIS_B1180BSUIS_B1170BSUIS_B1144
BSUI204722 BR_1702BR_1703BR_1693BR_1701BR_1699BR_1700BR_1697BR_1704BR_1695BR_1666
BSP376 BRADO1147BRADO1145BRADO1178BRADO1149BRADO1171BRADO1170BRADO1173BRADO1144BRADO1176BRADO1916
BSP36773 BCEP18194_A3774BCEP18194_A3775BCEP18194_A3887BCEP18194_A3893BCEP18194_A3891BCEP18194_A3892BCEP18194_A3889BCEP18194_A3776BCEP18194_C6571BCEP18194_A3892
BPSE320373 BURPS668_3366BURPS668_3365BURPS668_3205BURPS668_3199BURPS668_3201BURPS668_3200BURPS668_3203BURPS668_3364BURPS668_3204BURPS668_3200
BPSE320372 BURPS1710B_A3683BURPS1710B_A3682BURPS1710B_A3527BURPS1710B_A3521BURPS1710B_A3523BURPS1710B_A3522BURPS1710B_A3525BURPS1710B_A3681BURPS1710B_A3526BURPS1710B_A3522
BPSE272560 BPSL2899BPSL2898BPSL2766BPSL2760BPSL2762BPSL2761BPSL2764BPSL2897BPSL2765BPSL2761
BPET94624 BPET0901BPET0904BPET0656BPET0662BPET0660BPET0661BPET0658BPET0905BPET0657BPET0661
BPER257313 BP3421BP3418BP3341BP3347BP3345BP3346BP3343BP3417BP3342BP3346
BPAR257311 BPP3571BPP3568BPP3794BPP3788BPP3790BPP3789BPP3792BPP3567BPP3793BPP3789
BOVI236 GBOORF1710GBOORF1711GBOORF1701GBOORF1709GBOORF1706GBOORF1707GBOORF1704GBOORF1712GBOORF1703GBOORF1676
BMEL359391 BAB1_1714BAB1_1715BAB1_1705BAB1_1713BAB1_1711BAB1_1712BAB1_1709BAB1_1716BAB1_1707BAB1_1679
BMEL224914 BMEI0334BMEI0333BMEI0341BMEI0335BMEI0337BMEI0336BMEI0339BMEI0332BMEI0340BMEI0365
BMAL320389 BMA10247_2532BMA10247_2533BMA10247_1951BMA10247_1945BMA10247_1947BMA10247_1946BMA10247_1949BMA10247_2534BMA10247_1950BMA10247_1946
BMAL320388 BMASAVP1_A0266BMASAVP1_A0267BMASAVP1_A0825BMASAVP1_A0831BMASAVP1_A0829BMASAVP1_A0830BMASAVP1_A0827BMASAVP1_A0268BMASAVP1_A0826BMASAVP1_A0830
BMAL243160 BMA_2353BMA_2354BMA_2083BMA_2077BMA_2079BMA_2078BMA_2081BMA_2355BMA_2082BMA_2078
BJAP224911 BLR1537BLR1536BLL7148BLL7212BLL7154BLL7155BLL7152BLR1535BLL7149BLL7073
BCEN331272 BCEN2424_0688BCEN2424_0689BCEN2424_0798BCEN2424_0804BCEN2424_0802BCEN2424_0803BCEN2424_0800BCEN2424_0690BCEN2424_4417BCEN2424_0803
BCEN331271 BCEN_0205BCEN_0206BCEN_0315BCEN_0321BCEN_0319BCEN_0320BCEN_0317BCEN_0207BCEN_3949BCEN_0320
BCAN483179 BCAN_A1741BCAN_A1742BCAN_A1733BCAN_A1740BCAN_A1738BCAN_A1739BCAN_A1736BCAN_A1743BCAN_A1734BCAN_A1707
BBRO257310 BB4006BB4003BB4239BB4233BB4235BB4234BB4237BB4002BB4238BB4234
BBAC264462 BD2488BD2474BD1918BD0181BD0182BD0179BD2489BD0633BD0182
BAMB398577 BAMMC406_0607BAMMC406_0608BAMMC406_0692BAMMC406_0698BAMMC406_0696BAMMC406_0697BAMMC406_0694BAMMC406_0609BAMMC406_4309BAMMC406_0697
BAMB339670 BAMB_0581BAMB_0582BAMB_0675BAMB_0681BAMB_0679BAMB_0680BAMB_0677BAMB_0583BAMB_3849BAMB_0680
BABO262698 BRUAB1_1687BRUAB1_1688BRUAB1_1678BRUAB1_1686BRUAB1_1684BRUAB1_1685BRUAB1_1682BRUAB1_1689BRUAB1_1680BRUAB1_1653
ASP76114 EBA3958EBA3959EBA2654EBB84EBA2645EBA2644EBA2650EBA3657EBA2652EBA2644
ASP62977 ACIAD2615ACIAD2614ACIAD1383ACIAD2618ACIAD2620ACIAD2619ACIAD2622ACIAD2041ACIAD2623ACIAD2619
ASP62928 AZO0601AZO0602AZO0415AZO0421AZO0419AZO0420AZO0417AZO0571AZO0416AZO0420
ASP232721 AJS_3694AJS_3700AJS_1725AJS_2770AJS_2772AJS_2771AJS_1723AJS_3658AJS_1724AJS_2771
ASAL382245 ASA_0736ASA_0735ASA_0747ASA_0741ASA_0743ASA_0742ASA_0745ASA_1283ASA_0746ASA_0742
APLE416269 APL_0284APL_0283APL_0299APL_0301APL_0300APL_0303APL_1153APL_0304APL_0300
AHYD196024 AHA_3647AHA_3648AHA_3636AHA_3642AHA_3640AHA_3641AHA_3638AHA_1301AHA_3637AHA_3641
AFER243159 AFE_2962AFE_2963AFE_2954AFE_2961AFE_2959AFE_2960AFE_2957AFE_2964AFE_2953AFE_2960
AEHR187272 MLG_2777MLG_2494MLG_0240MLG_0244MLG_0245MLG_0242MLG_2493MLG_0241MLG_0245
ACRY349163 ACRY_2904ACRY_2905ACRY_2903ACRY_2901ACRY_2902ACRY_2899ACRY_2906ACRY_0363ACRY_2902
ACAU438753 AZC_0519AZC_0515AZC_0526AZC_0520AZC_0522AZC_0521AZC_0524AZC_0513AZC_0525AZC_1258
ABOR393595 ABO_0753ABO_0752ABO_0760ABO_0754ABO_0756ABO_0755ABO_0758ABO_0751ABO_0759ABO_0755
ABAU360910 BAV2780BAV2778BAV2911BAV2913BAV2912BAV2915BAV2777BAV2916BAV2912
ABAC204669 ACID345_4544ACID345_4725ACID345_0590ACID345_1409ACID345_4001ACID345_0595ACID345_0592ACID345_3618ACID345_0591ACID345_0595
AAVE397945 AAVE_4237AAVE_4240AAVE_3404AAVE_2228AAVE_2226AAVE_2227AAVE_3406AAVE_0833AAVE_3405AAVE_2227


Organism features enriched in list (features available for 206 out of the 219 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00002451692
Disease:Brucellosis 0.005336155
Disease:Bubonic_plague 0.001855666
Disease:Gastroenteritis 0.00213341013
Endospores:No 1.341e-1335211
Endospores:Yes 7.656e-10153
GC_Content_Range4:0-40 1.497e-3313213
GC_Content_Range4:40-60 2.318e-8110224
GC_Content_Range4:60-100 2.469e-1083145
GC_Content_Range7:30-40 3.114e-2113166
GC_Content_Range7:50-60 6.752e-1269107
GC_Content_Range7:60-70 4.399e-1383134
Genome_Size_Range5:0-2 8.765e-285155
Genome_Size_Range5:2-4 0.000372352197
Genome_Size_Range5:4-6 1.809e-23119184
Genome_Size_Range5:6-10 0.00002343047
Genome_Size_Range9:1-2 4.339e-215128
Genome_Size_Range9:2-3 1.076e-621120
Genome_Size_Range9:4-5 7.126e-95996
Genome_Size_Range9:5-6 7.252e-126088
Genome_Size_Range9:6-8 3.137e-62738
Gram_Stain:Gram_Neg 1.950e-41190333
Habitat:Multiple 0.000066683178
Habitat:Specialized 0.0004210853
Motility:No 1.829e-1417151
Motility:Yes 8.245e-13135267
Optimal_temp.:25-30 1.015e-61719
Optimal_temp.:37 0.005461627106
Oxygen_Req:Anaerobic 7.376e-1011102
Oxygen_Req:Facultative 4.953e-798201
Pathogenic_in:Plant 0.00230131115
Shape:Coccobacillus 0.0018138911
Shape:Coccus 3.044e-10682
Shape:Rod 1.664e-19172347
Shape:Spiral 0.0002639334
Temp._range:Mesophilic 0.0003145182473
Temp._range:Psychrophilic 0.001311389
Temp._range:Thermophilic 0.0000280235



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 135
Effective number of orgs (counting one per cluster within 468 clusters): 113

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSP84588 ncbi Synechococcus sp. WH 81021
SSP64471 ncbi Synechococcus sp. CC93111
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)1
SSP1148 ncbi Synechocystis sp. PCC 68031
SSP1131 Synechococcus sp. CC96051
SSOL273057 ncbi Sulfolobus solfataricus P21
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SMUT210007 ncbi Streptococcus mutans UA1591
SMAR399550 ncbi Staphylothermus marinus F10
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSP101510 ncbi Rhodococcus jostii RHA11
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
PTOR263820 ncbi Picrophilus torridus DSM 97900
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE50
NSP35761 Nocardioides sp.1
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S20
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LSPH444177 ncbi Lysinibacillus sphaericus C3-411
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CNOV386415 ncbi Clostridium novyi NT1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B1
BTUR314724 ncbi Borrelia turicatae 91E1351
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B310
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.1
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG11
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AAUR290340 ncbi Arthrobacter aurescens TC11


Names of the homologs of the genes in the group in each of these orgs
  RUVB   RUVA   EG12854   EG11110   EG11011   EG11010   EG11008   EG10925   EG10684   EG10271   
WPIP80849 WB_1066
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TVOL273116
TPEN368408
TLET416591 TLET_0240
TKOD69014
TACI273075
STOK273063
STHE322159 STER_1909
STHE299768 STR1936
STHE264199 STU1936
SSP84588 SYNW0715OR1945
SSP64471 GSYN1744
SSP321332 CYB_0546
SSP1148 SLR0204
SSP1131 SYNCC9605_0474
SSOL273057 SSO2295
SPYO370554 MGAS10750_SPY0037
SPYO370553 MGAS2096_SPY0037
SPYO370552 MGAS10270_SPY0037
SPYO370551 MGAS9429_SPY0036
SPYO319701 M28_SPY0035
SPYO293653 M5005_SPY0035
SPYO286636 M6_SPY0084
SPYO198466 SPYM3_0032
SPYO193567 SPS0033
SPYO186103 SPYM18_0039
SPYO160490 SPY0038
SMUT210007 SMU_64
SMAR399550
SAGA211110 GBS0049
SAGA208435 SAG_0049
SAGA205921 SAK_0082
SACI330779
RSP101510 RHA1_RO06892
RSAL288705
PTOR263820
PMOB403833 PMOB_1484
PMAR93060 P9215_11891
PMAR74547 PMT1136
PMAR74546 PMT9312_1065
PMAR59920 PMN2A_0268
PMAR167555 NATL1_09371
PMAR167546 P9301ORF_1181
PMAR167542 P9515ORF_1196
PMAR167540 PMM1054
PMAR146891
PISL384616
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PACN267747 PPA1158
PABY272844
NSP35761 NOCA_2385
NSEN222891 NSE_0955
NPHA348780
MTHE349307 MTHE_0834
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM3087
MMAR444158
MMAR426368
MMAR402880
MMAR368407 MEMAR_0776
MMAR267377
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MGEN243273
MFLO265311
MCAP340047
MBUR259564 MBUR_0392
MBAR269797 MBAR_A1627
MART243272
MAEO419665
MACE188937 MA1540
LXYL281090 LXX10760
LSPH444177 BSPH_3938
LPLA220668
LMES203120
LINT267671 LIC_12885
LINT189518 LA0723
LHEL405566 LHV_0429
LCAS321967 LSEI_0769
LBOR355277 LBJ_0544
LBOR355276 LBL_2536
LBIF456481 LEPBI_I3318
LBIF355278 LBF_3203
IHOS453591
HWAL362976 HQ2276A
HSP64091
HSAL478009
HMUK485914 HMUK_0148
HMAR272569 RRNAC2119
HBUT415426
CSUL444179
CNOV386415 NT01CX_1833
CMIC443906 CMM_1816
CMIC31964 CMS0716
CMAQ397948
CKOR374847
CKLU431943 CKL_3144
CBOT508765 CLL_A1023
BTUR314724 BT0023A
BSP107806
BHER314723
BGAR290434
BBUR224326
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AURANTIMONAS
ASP1667 ARTH_2303
APER272557
ANAE240017 ANA_0861
ALAI441768 ACL_1111
AFUL224325
AAUR290340 AAUR_2299


Organism features enriched in list (features available for 125 out of the 135 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.003702769
Disease:Leptospirosis 0.002034244
Disease:Wide_range_of_infections 3.078e-81111
Endospores:No 1.401e-1989211
Endospores:Yes 0.0034455453
GC_Content_Range4:0-40 2.765e-1076213
GC_Content_Range4:40-60 0.005923537224
GC_Content_Range4:60-100 1.254e-612145
GC_Content_Range7:0-30 4.302e-72547
GC_Content_Range7:30-40 0.000298151166
GC_Content_Range7:50-60 0.006231114107
GC_Content_Range7:60-70 8.794e-710134
Genome_Size_Range5:0-2 7.302e-1974155
Genome_Size_Range5:4-6 4.330e-139184
Genome_Size_Range5:6-10 0.0000987147
Genome_Size_Range9:0-1 1.184e-112227
Genome_Size_Range9:1-2 8.630e-952128
Genome_Size_Range9:4-5 0.0000411796
Genome_Size_Range9:5-6 3.394e-8288
Gram_Stain:Gram_Neg 1.760e-1434333
Habitat:Aquatic 0.00017373391
Habitat:Multiple 1.203e-814178
Habitat:Specialized 0.00002772453
Motility:No 6.259e-652151
Optimal_temp.:100 0.009671033
Optimal_temp.:35-40 0.009671033
Optimal_temp.:85 0.002034244
Oxygen_Req:Aerobic 0.000924126185
Oxygen_Req:Anaerobic 0.000063437102
Pathogenic_in:Animal 0.0002792466
Pathogenic_in:Human 0.000322130213
Pathogenic_in:No 0.007774459226
Salinity:Extreme_halophilic 0.005602857
Salinity:Non-halophilic 0.000161837106
Shape:Coccus 1.463e-63582
Shape:Irregular_coccus 4.112e-91517
Shape:Rod 1.803e-2326347
Shape:Sphere 4.596e-91619
Temp._range:Hyperthermophilic 3.877e-91823
Temp._range:Mesophilic 0.000165887473
Temp._range:Thermophilic 0.00529501435



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 58
Effective number of orgs (counting one per cluster within 468 clusters): 45

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CBUR360115 ncbi Coxiella burnetii RSA 331 0.000087899710
CBUR227377 ncbi Coxiella burnetii RSA 493 0.0001010101110
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-00 0.00012546909
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-111 0.0001521105310
NWIN323098 ncbi Nitrobacter winogradskyi Nb-255 0.0004690117810
SACI56780 ncbi Syntrophus aciditrophicus SB 0.0004770118010
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1 0.0006888122410
CTEP194439 ncbi Chlorobium tepidum TLS 0.00097358699
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 23270 0.0012512129910
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G20 0.0012805130210
NEUR228410 ncbi Nitrosomonas europaea ATCC 19718 0.0012904130310
NEUT335283 ncbi Nitrosomonas eutropha C91 0.0013513130910
RAKA293614 ncbi Rickettsia akari Hartford 0.00169344167
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith 0.00169344167
NHAM323097 ncbi Nitrobacter hamburgensis X14 0.0016963133910
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 1 0.0016963133910
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB 0.0018142134810
LPNE297245 ncbi Legionella pneumophila Lens 0.0018829135310
RRIC452659 ncbi Rickettsia rickettsii Iowa 0.00192854247
LPNE400673 ncbi Legionella pneumophila Corby 0.0019539135810
LPNE297246 ncbi Legionella pneumophila Paris 0.0020124136210
RCON272944 ncbi Rickettsia conorii Malish 7 0.00215634317
NOCE323261 ncbi Nitrosococcus oceani ATCC 19707 0.0021656137210
NMUL323848 ncbi Nitrosospira multiformis ATCC 25196 0.0022791137910
RMAS416276 ncbi Rickettsia massiliae MTU5 0.00252104417
OTSU357244 ncbi Orientia tsutsugamushi Boryong 0.00269692746
OCAR504832 ncbi Oligotropha carboxidovorans OM5 0.0028082140810
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin345 0.0033039143110
RBEL391896 ncbi Rickettsia bellii OSU 85-389 0.00351044637
BOVI236 Brucella ovis 0.0041245146310
MMAG342108 ncbi Magnetospirillum magneticum AMB-1 0.0042974146910
BQUI283165 ncbi Bartonella quintana Toulouse 0.00441757178
BBAC360095 ncbi Bartonella bacilliformis KC583 0.00446557188
RFEL315456 ncbi Rickettsia felis URRWXCal2 0.00448394807
PCAR338963 ncbi Pelobacter carbinolicus DSM 2380 0.0046945148210
RBEL336407 ncbi Rickettsia bellii RML369-C 0.00474354847
DSHI398580 ncbi Dinoroseobacter shibae DFL 12 0.0049217148910
BBAC264462 ncbi Bdellovibrio bacteriovorus HD100 0.004963610459
MFLA265072 ncbi Methylobacillus flagellatus KT 0.0053701150210
TDEN292415 ncbi Thiobacillus denitrificans ATCC 25259 0.0055152150610
MCAP243233 ncbi Methylococcus capsulatus Bath 0.0056264150910
GMET269799 ncbi Geobacter metallireducens GS-15 0.0057778151310
BMEL359391 ncbi Brucella melitensis biovar Abortus 2308 0.0060516152010
BABO262698 ncbi Brucella abortus bv. 1 str. 9-941 0.0060916152110
GSUL243231 ncbi Geobacter sulfurreducens PCA 0.0061725152310
RPAL316057 ncbi Rhodopseudomonas palustris BisB5 0.0064207152910
MXAN246197 ncbi Myxococcus xanthus DK 1622 0.0070354154310
GURA351605 ncbi Geobacter uraniireducens Rf4 0.0072204154710
BSUI470137 ncbi Brucella suis ATCC 23445 0.0072204154710
BCAN483179 ncbi Brucella canis ATCC 23365 0.0083722157010
BSUI204722 ncbi Brucella suis 1330 0.0086987157610
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M 0.0087542157710
RPAL316058 ncbi Rhodopseudomonas palustris HaA2 0.0087542157710
BHEN283166 ncbi Bartonella henselae Houston-1 0.00881857848
RPAL316055 ncbi Rhodopseudomonas palustris BisA53 0.0092099158510
ABOR393595 ncbi Alcanivorax borkumensis SK2 0.0095055159010
BTRI382640 ncbi Bartonella tribocorum CIP 105476 0.00953747928
CCHL340177 ncbi Chlorobium chlorochromatii CaD3 0.00981977958


Names of the homologs of the genes in the group in each of these orgs
  RUVB   RUVA   EG12854   EG11110   EG11011   EG11010   EG11008   EG10925   EG10684   EG10271   
CBUR360115 COXBURSA331_A1756COXBURSA331_A1754COXBURSA331_A0177COXBURSA331_A1689COXBURSA331_A1762COXBURSA331_A1761COXBURSA331_A0175COXBURSA331_A1753COXBURSA331_A0176COXBURSA331_A1761
CBUR227377 CBU_1570CBU_1568CBU_0092CBU_1506CBU_1575CBU_1574CBU_0090CBU_1567CBU_0091CBU_1574
LINT363253 LI1187LI0109LI0724LI0694LI0695LI0692LI0268LI0691LI0695
CBUR434922 COXBU7E912_0418COXBU7E912_0420COXBU7E912_2017COXBU7E912_0478COXBU7E912_0412COXBU7E912_0413COXBU7E912_2019COXBU7E912_0421COXBU7E912_2018COXBU7E912_0413
NWIN323098 NWI_2724NWI_2725NWI_2713NWI_2723NWI_2719NWI_2720NWI_2717NWI_2726NWI_2714NWI_2040
SACI56780 SYN_02971SYN_02972SYN_00190SYN_00892SYN_00186SYN_00185SYN_00188SYN_02973SYN_00189SYN_00185
PSP312153 PNUC_1880PNUC_1879PNUC_0273PNUC_1340PNUC_0277PNUC_0278PNUC_0275PNUC_1878PNUC_0274PNUC_0278
CTEP194439 CT_0262CT_0640CT_1264CT_0634CT_0633CT_0636CT_1664CT_0638CT_0633
AFER243159 AFE_2962AFE_2963AFE_2954AFE_2961AFE_2959AFE_2960AFE_2957AFE_2964AFE_2953AFE_2960
DDES207559 DDE_2322DDE_2323DDE_1580DDE_2735DDE_3630DDE_3629DDE_3632DDE_2324DDE_3633DDE_3629
NEUR228410 NE0213NE0212NE0220NE0214NE0216NE0215NE0218NE0211NE0219NE0215
NEUT335283 NEUT_0284NEUT_0283NEUT_0291NEUT_0285NEUT_0287NEUT_0286NEUT_0289NEUT_0282NEUT_0290NEUT_0286
RAKA293614 A1C_01700A1C_02315A1C_02310A1C_02265A1C_00880A1C_06010A1C_02310
RRIC392021 A1G_01780A1G_02405A1G_02400A1G_02315A1G_00915A1G_06560A1G_02400
NHAM323097 NHAM_3521NHAM_3522NHAM_3508NHAM_3520NHAM_3514NHAM_3515NHAM_3512NHAM_3523NHAM_3509NHAM_0747
LPNE272624 LPG1576LPG1288LPG2042LPG1575LPG1573LPG1574LPG1571LPG1287LPG2043LPG1574
SFUM335543 SFUM_0993SFUM_0994SFUM_0757SFUM_1216SFUM_0753SFUM_0752SFUM_0755SFUM_0995SFUM_0756SFUM_0752
LPNE297245 LPL1449LPL1251LPL2020LPL1450LPL1452LPL1451LPL1454LPL1250LPL2021LPL1451
RRIC452659 RRIOWA_0377RRIOWA_0505RRIOWA_0504RRIOWA_0487RRIOWA_0199RRIOWA_1405RRIOWA_0504
LPNE400673 LPC_1000LPC_0713LPC_1528LPC_0999LPC_0997LPC_0998LPC_0995LPC_0712LPC_1529LPC_0998
LPNE297246 LPP1534LPP1251LPP2025LPP1533LPP1531LPP1532LPP1529LPP1250LPP2026LPP1532
RCON272944 RC0312RC0423RC0422RC0406RC0159RC1200RC0422
NOCE323261 NOC_0140NOC_0139NOC_0147NOC_0141NOC_0143NOC_0142NOC_0145NOC_0138NOC_0146NOC_0142
NMUL323848 NMUL_A2719NMUL_A2720NMUL_A2712NMUL_A2718NMUL_A2716NMUL_A2717NMUL_A2714NMUL_A2721NMUL_A2713NMUL_A2717
RMAS416276 RMA_0318RMA_0433RMA_0432RMA_0416RMA_0166RMA_1215RMA_0432
OTSU357244 OTBS_1222OTBS_1223OTBS_0018OTBS_1638OTBS_1839OTBS_1223
OCAR504832 OCAR_7299OCAR_7301OCAR_7288OCAR_7297OCAR_7292OCAR_7293OCAR_7290OCAR_7302OCAR_7289OCAR_6722
ABAC204669 ACID345_4544ACID345_4725ACID345_0590ACID345_1409ACID345_4001ACID345_0595ACID345_0592ACID345_3618ACID345_0591ACID345_0595
RBEL391896 A1I_06620A1I_06465A1I_06470A1I_06455A1I_01390A1I_07275A1I_06470
BOVI236 GBOORF1710GBOORF1711GBOORF1701GBOORF1709GBOORF1706GBOORF1707GBOORF1704GBOORF1712GBOORF1703GBOORF1676
MMAG342108 AMB3216AMB3218AMB3208AMB3215AMB3213AMB3214AMB3211AMB3219AMB3210AMB3214
BQUI283165 BQ11870BQ11860BQ11840BQ11850BQ11820BQ11890BQ11770BQ11710
BBAC360095 BARBAKC583_0149BARBAKC583_0148BARBAKC583_0146BARBAKC583_0147BARBAKC583_0144BARBAKC583_0151BARBAKC583_0165BARBAKC583_0173
RFEL315456 RF_0991RF_0505RF_0504RF_0492RF_1173RF_1234RF_0504
PCAR338963 PCAR_2338PCAR_2337PCAR_0410PCAR_1492PCAR_2977PCAR_2978PCAR_2975PCAR_2336PCAR_2974PCAR_2978
RBEL336407 RBE_0227RBE_0266RBE_0265RBE_0268RBE_1178RBE_0129RBE_0265
DSHI398580 DSHI_1105DSHI_1104DSHI_1113DSHI_1107DSHI_1109DSHI_1108DSHI_1111DSHI_1103DSHI_1112DSHI_1108
BBAC264462 BD2488BD2474BD1918BD0181BD0182BD0179BD2489BD0633BD0182
MFLA265072 MFLA_2344MFLA_2353MFLA_2337MFLA_2343MFLA_1558MFLA_2342MFLA_2339MFLA_2354MFLA_2338MFLA_2342
TDEN292415 TBD_2211TBD_2213TBD_2204TBD_2210TBD_2208TBD_2209TBD_2206TBD_2214TBD_2205TBD_2209
MCAP243233 MCA_1223MCA_1222MCA_1231MCA_1224MCA_1227MCA_1226MCA_1229MCA_1221MCA_1230MCA_1226
GMET269799 GMET_0746GMET_0745GMET_3542GMET_3556GMET_3538GMET_3537GMET_3540GMET_0744GMET_3499GMET_3537
BMEL359391 BAB1_1714BAB1_1715BAB1_1705BAB1_1713BAB1_1711BAB1_1712BAB1_1709BAB1_1716BAB1_1707BAB1_1679
BABO262698 BRUAB1_1687BRUAB1_1688BRUAB1_1678BRUAB1_1686BRUAB1_1684BRUAB1_1685BRUAB1_1682BRUAB1_1689BRUAB1_1680BRUAB1_1653
GSUL243231 GSU_1077GSU_1076GSU_2552GSU_3461GSU_0027GSU_0028GSU_0025GSU_1075GSU_2305GSU_0028
RPAL316057 RPD_4167RPD_4169RPD_4143RPD_4165RPD_4149RPD_4150RPD_4147RPD_4170RPD_4144RPD_4004
MXAN246197 MXAN_4969MXAN_4972MXAN_3000MXAN_4456MXAN_5754MXAN_5753MXAN_5756MXAN_4973MXAN_4581MXAN_0275
GURA351605 GURA_1413GURA_1414GURA_3692GURA_4320GURA_0205GURA_0206GURA_0203GURA_1415GURA_0202GURA_0206
BSUI470137 BSUIS_B1178BSUIS_B1179BSUIS_B1169BSUIS_B1177BSUIS_B1174BSUIS_B1175BSUIS_B1172BSUIS_B1180BSUIS_B1170BSUIS_B1144
BCAN483179 BCAN_A1741BCAN_A1742BCAN_A1733BCAN_A1740BCAN_A1738BCAN_A1739BCAN_A1736BCAN_A1743BCAN_A1734BCAN_A1707
BSUI204722 BR_1702BR_1703BR_1693BR_1701BR_1699BR_1700BR_1697BR_1704BR_1695BR_1666
BMEL224914 BMEI0334BMEI0333BMEI0341BMEI0335BMEI0337BMEI0336BMEI0339BMEI0332BMEI0340BMEI0365
RPAL316058 RPB_4269RPB_4271RPB_1816RPB_4268RPB_1810RPB_1809RPB_1812RPB_4272RPB_1815RPB_1241
BHEN283166 BH14890BH14880BH14860BH14870BH14840BH14910BH14790BH14710
RPAL316055 RPE_4767RPE_4769RPE_4701RPE_4763RPE_4709RPE_4710RPE_4707RPE_4770RPE_4702RPE_4579
ABOR393595 ABO_0753ABO_0752ABO_0760ABO_0754ABO_0756ABO_0755ABO_0758ABO_0751ABO_0759ABO_0755
BTRI382640 BT_2375BT_2374BT_2371BT_2372BT_2368BT_2377BT_2361BT_2326
CCHL340177 CAG_0457CAG_1912CAG_1908CAG_1907CAG_1910CAG_0164CAG_1039CAG_1907


Organism features enriched in list (features available for 57 out of the 58 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Groups 0.009407422
Disease:Bacillary_angiomatosis 0.009407422
Disease:Brucellosis 7.590e-655
Disease:Legionnaire's_disease 0.000082944
Disease:Q_fever 0.009407422
Disease:Rocky_Mountain_Spotted_Fever 0.000890533
Disease:fever 0.009407422
Endospores:No 0.00024719211
GC_Content_Range7:50-60 0.000265221107
Genome_Size_Range5:2-4 0.000016234197
Genome_Size_Range5:4-6 0.006055010184
Genome_Size_Range9:3-4 1.049e-62177
Gram_Stain:Gram_Neg 3.005e-1154333
Motility:No 0.00053665151
Oxygen_Req:Aerobic 0.003891827185
Oxygen_Req:Facultative 0.008904512201
Shape:Coccobacillus 0.0000138711



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951700.7355
GLYCOCAT-PWY (glycogen degradation I)2461910.7189
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002120.7169
PWY-5918 (heme biosynthesis I)2721980.6940
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181750.6934
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491390.6827
PWY-1269 (CMP-KDO biosynthesis I)3252150.6781
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862000.6710
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251740.6643
TYRFUMCAT-PWY (tyrosine degradation I)1841540.6582
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911990.6517
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962000.6459
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482160.6342
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901960.6339
PWY-4041 (γ-glutamyl cycle)2791880.6080
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831460.6028
PWY-5913 (TCA cycle variation IV)3011940.5933
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911460.5750
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392040.5726
AST-PWY (arginine degradation II (AST pathway))1201090.5696
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761380.5685
PWY-5148 (acyl-CoA hydrolysis)2271610.5673
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911440.5604
PWY-5028 (histidine degradation II)1301130.5568
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551700.5494
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561250.5445
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291950.5344
P344-PWY (acrylonitrile degradation)2101470.5205
REDCITCYC (TCA cycle variation II)1741300.5158
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351090.5022
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001800.5016
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))1381100.4978
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491600.4974
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491600.4974
PWY-6087 (4-chlorocatechol degradation)2231480.4882
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222160.4866
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162140.4837
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982090.4836
GALACTARDEG-PWY (D-galactarate degradation I)1511140.4779
PWY-46 (putrescine biosynthesis III)1381070.4735
P601-PWY (D-camphor degradation)95840.4732
DAPLYSINESYN-PWY (lysine biosynthesis I)3421900.4714
PWY-5386 (methylglyoxal degradation I)3051770.4693
PWY-3162 (tryptophan degradation V (side chain pathway))94830.4692
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96840.4679
PWY-5084 (2-ketoglutarate dehydrogenase complex)3261840.4672
GLUCONSUPER-PWY (D-gluconate degradation)2291470.4637
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112920.4608
VALDEG-PWY (valine degradation I)2901700.4587
PWY-6193 (3-chlorocatechol degradation II (ortho))1941310.4560
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3651950.4552
GLUCARDEG-PWY (D-glucarate degradation I)1521110.4506
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94810.4504
PWY-5340 (sulfate activation for sulfonation)3852000.4474
GALACTCAT-PWY (D-galactonate degradation)104860.4457
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation)2121370.4433
GALACTITOLCAT-PWY (galactitol degradation)73680.4426
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891670.4410
PWY-5188 (tetrapyrrole biosynthesis I)4392140.4398
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)1351010.4369
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3741950.4360
PWY0-862 (cis-dodecenoyl biosynthesis)3431850.4354
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111740.4349
PWY-1501 (mandelate degradation I)73670.4321
PWY-6268 (adenosylcobalamin salvage from cobalamin)3171740.4208
PWY0-501 (lipoate biosynthesis and incorporation I)3851960.4197
PWY-2361 (3-oxoadipate degradation)82710.4194
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81700.4151
PWY0-1353 (succinate to cytochrome bd oxidase electron transfer)1781180.4125
PWY0-1337 (oleate β-oxidation)1991270.4113
KDOSYN-PWY (KDO transfer to lipid IVA I)1801180.4059
PWY-5025 (IAA biosynthesis IV)92750.4043
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791170.4018
PWY0-981 (taurine degradation IV)106820.4003



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  RUVA   EG12854   EG11110   EG11011   EG11010   EG11008   EG10925   EG10684   EG10271   
RUVB0.9999870.9993280.9996650.9995980.9996630.9995440.999940.9994980.999335
RUVA0.9992180.9994380.9994340.9994960.9993480.9999620.9993130.999015
EG128540.9996560.9997660.9997710.9998810.9992230.9999160.999434
EG111100.9998630.9999190.9997950.9994730.9997410.99972
EG110110.9999740.9999370.999460.9998650.999895
EG110100.999930.9995120.9998540.999902
EG110080.999390.9999690.999758
EG109250.9993140.999019
EG106840.999627
EG10271



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PAIRWISE BLAST SCORES:

  RUVB   RUVA   EG12854   EG11110   EG11011   EG11010   EG11008   EG10925   EG10684   EG10271   
RUVB0.0f0---------
RUVA-0.0f0--------
EG12854--0.0f0-------
EG11110---0.0f0------
EG11011----0.0f0-----
EG11010-----0.0f0----
EG11008------0.0f0---
EG10925-------0.0f0--
EG10684--------0.0f0-
EG10271-----1.2e-20---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-2201 (The Tol-Pal Cell Envelope Complex) (degree of match pw to cand: 0.833, degree of match cand to pw: 0.500, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9993 EG10684 (pal) EG10684-MONOMER (Pal)
   *in cand* 0.9996 0.9992 EG12854 (ybgF) EG12854-MONOMER (predicted periplasmic protein)
   *in cand* 0.9998 0.9993 EG11008 (tolB) EG11008-MONOMER (TolB)
   *in cand* 0.9998 0.9994 EG11011 (tolR) EG11011-MONOMER (TolR)
   *in cand* 0.9998 0.9995 EG11010 (tolQ) EG11010-MONOMER (TolQ)
             0.9966 0.9833 EG11007 (tolA) EG11007-MONOMER (TolA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9990 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
   *in cand* 0.9995 0.9990 EG10925 (ruvC) EG10925-MONOMER (Holliday junction nuclease; resolution of structures; repair)
   *in cand* 0.9997 0.9994 EG11110 (ybgC) EG11110-MONOMER (esterase/thioesterase)
   *in cand* 0.9995 0.9990 RUVA (ruvA) EG10923-MONOMER (branch migration of Holliday structures; repair)
   *in cand* 0.9997 0.9993 RUVB (ruvB) EG10924-MONOMER (branch migration of Holliday structures; repair helicase)

- CPLX0-2202 (Colicin S4 Transport System) (degree of match pw to cand: 0.714, degree of match cand to pw: 0.500, average score: 0.867)
  Genes in pathway or complex:
             0.6072 0.3679 EG11124 (ompW) EG11124-MONOMER (OmpW, outer membrane protein)
             0.9966 0.9833 EG11007 (tolA) EG11007-MONOMER (TolA)
   *in cand* 0.9998 0.9995 EG11010 (tolQ) EG11010-MONOMER (TolQ)
   *in cand* 0.9998 0.9994 EG11011 (tolR) EG11011-MONOMER (TolR)
   *in cand* 0.9998 0.9993 EG11008 (tolB) EG11008-MONOMER (TolB)
   *in cand* 0.9996 0.9992 EG12854 (ybgF) EG12854-MONOMER (predicted periplasmic protein)
   *in cand* 0.9997 0.9993 EG10684 (pal) EG10684-MONOMER (Pal)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9990 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
   *in cand* 0.9995 0.9990 EG10925 (ruvC) EG10925-MONOMER (Holliday junction nuclease; resolution of structures; repair)
   *in cand* 0.9997 0.9994 EG11110 (ybgC) EG11110-MONOMER (esterase/thioesterase)
   *in cand* 0.9995 0.9990 RUVA (ruvA) EG10923-MONOMER (branch migration of Holliday structures; repair)
   *in cand* 0.9997 0.9993 RUVB (ruvB) EG10924-MONOMER (branch migration of Holliday structures; repair helicase)

- RUVABC-CPLX (resolvasome) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.300, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9990 RUVA (ruvA) EG10923-MONOMER (branch migration of Holliday structures; repair)
   *in cand* 0.9997 0.9993 RUVB (ruvB) EG10924-MONOMER (branch migration of Holliday structures; repair helicase)
   *in cand* 0.9995 0.9990 EG10925 (ruvC) EG10925-MONOMER (Holliday junction nuclease; resolution of structures; repair)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9990 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
   *in cand* 0.9997 0.9993 EG10684 (pal) EG10684-MONOMER (Pal)
   *in cand* 0.9998 0.9993 EG11008 (tolB) EG11008-MONOMER (TolB)
   *in cand* 0.9998 0.9995 EG11010 (tolQ) EG11010-MONOMER (TolQ)
   *in cand* 0.9998 0.9994 EG11011 (tolR) EG11011-MONOMER (TolR)
   *in cand* 0.9997 0.9994 EG11110 (ybgC) EG11110-MONOMER (esterase/thioesterase)
   *in cand* 0.9996 0.9992 EG12854 (ybgF) EG12854-MONOMER (predicted periplasmic protein)

- CPLX0-2221 (The Colicin A Import System) (degree of match pw to cand: 0.625, degree of match cand to pw: 0.500, average score: 0.867)
  Genes in pathway or complex:
             0.9966 0.9833 EG11007 (tolA) EG11007-MONOMER (TolA)
   *in cand* 0.9998 0.9995 EG11010 (tolQ) EG11010-MONOMER (TolQ)
   *in cand* 0.9998 0.9994 EG11011 (tolR) EG11011-MONOMER (TolR)
   *in cand* 0.9998 0.9993 EG11008 (tolB) EG11008-MONOMER (TolB)
   *in cand* 0.9996 0.9992 EG12854 (ybgF) EG12854-MONOMER (predicted periplasmic protein)
   *in cand* 0.9997 0.9993 EG10684 (pal) EG10684-MONOMER (Pal)
             0.7134 0.1339 EG10671 (ompF) EG10671-MONOMER (OmpF)
             0.7509 0.5406 EG10126 (btuB) EG10126-MONOMER (outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9990 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
   *in cand* 0.9995 0.9990 EG10925 (ruvC) EG10925-MONOMER (Holliday junction nuclease; resolution of structures; repair)
   *in cand* 0.9997 0.9994 EG11110 (ybgC) EG11110-MONOMER (esterase/thioesterase)
   *in cand* 0.9995 0.9990 RUVA (ruvA) EG10923-MONOMER (branch migration of Holliday structures; repair)
   *in cand* 0.9997 0.9993 RUVB (ruvB) EG10924-MONOMER (branch migration of Holliday structures; repair helicase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10684 EG11008 EG11010 EG11011 EG11110 EG12854 (centered at EG11008)
EG10271 (centered at EG10271)
EG10925 RUVA RUVB (centered at RUVA)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  RUVB   RUVA   EG12854   EG11110   EG11011   EG11010   EG11008   EG10925   EG10684   EG10271   
415/623411/623226/623316/623284/623277/623336/623425/623313/623269/623
AAEO224324:0:Tyes--0182------
AAUR290340:2:Tyes-------0--
AAVE397945:0:Tyes3346334925301375137313742532025311374
ABAC204669:0:Tyes399041750824343652304915
ABAU360910:0:Tyes31-1351371361390140136
ABOR393595:0:Tyes2193547084
ABUT367737:0:Tyes-213-0---1801--
ACAU438753:0:Tyes621379811012757
ACEL351607:0:Tyes01-----2--
ACRY349163:8:Tyes25532554-2552255025512548255502551
ADEH290397:0:Tyes-294-99223029327003
AEHR187272:0:Tyes252222390-452223815
AFER243159:0:Tyes910186741107
AHYD196024:0:Tyes2262226322512257225522562253022522256
ALAI441768:0:Tyes---0------
AMAR234826:0:Tyes-----69077144069
AMAR329726:7:Tyes------0---
AMAR329726:9:Tyes18580-----2357--
AMET293826:0:Tyes21-1663---0--
ANAE240017:0:Tyes-0--------
AORE350688:0:Tyes01-----2--
APHA212042:0:Tyes-----8739620300-
APLE416269:0:Tyes10-121413168681713
APLE434271:0:Tno0--171918218562218
ASAL382245:5:Tyes101268710527117
ASP1667:3:Tyes-------0--
ASP232721:2:Tyes1915192121016101810170187911017
ASP62928:0:Tyes1871880645215715
ASP62977:0:Tyes113711360113911411140114362011441140
ASP76114:2:Tyes7677686021458551
AVAR240292:3:Tyes8992717-30364475--0--
BABO262698:1:Tno3334243230312835260
BAMB339670:2:Tno--------0-
BAMB339670:3:Tno019510199100972-100
BAMB398577:2:Tno--------0-
BAMB398577:3:Tno0185918990872-90
BAMY326423:0:Tyes698699-0--1148---
BANT260799:0:Tno905906-0------
BANT261594:2:Tno932933-0------
BANT568206:2:Tyes36353636-0------
BANT592021:2:Tno958959-0------
BBAC264462:0:Tyes-21282117160223021294133
BBAC360095:0:Tyes5--423072129
BBRO257310:0:Tyes412462402422412440245241
BCAN483179:1:Tno3132233028292633240
BCEN331271:1:Tno--------0-
BCEN331271:2:Tno011091151131141112-114
BCEN331272:2:Tyes--------0-
BCEN331272:3:Tyes011101161141151122-115
BCER226900:1:Tyes789790-0------
BCER288681:0:Tno846847-0------
BCER315749:1:Tyes856857-0------
BCER405917:1:Tyes848849-0------
BCER572264:1:Tno814815-0------
BCIC186490:0:Tyes1891901----1910-
BCLA66692:0:Tyes10--------
BFRA272559:1:Tyes032693993---35342891--
BFRA295405:0:Tno035744327---38683139--
BHAL272558:0:Tyes-0-1068------
BHEN283166:0:Tyes16--151314111870
BJAP224911:0:Fyes2156445708565056515648056455569
BLIC279010:0:Tyes825826-0--1312---
BLON206672:0:Tyes-1-----0--
BMAL243160:1:Tno2542556021425651
BMAL320388:1:Tno015505565545555522551555
BMAL320389:1:Tyes5755766021457751
BMEL224914:1:Tno21935470833
BMEL359391:1:Tno3435253331322936270
BOVI236:1:Tyes3334243229302735260
BPAR257311:0:Tno412282222242232260227223
BPER257313:0:Tyes7471064527015
BPET94624:0:Tyes2522550645225615
BPSE272560:1:Tyes1391386021413751
BPSE320372:1:Tno1601596021415851
BPSE320373:1:Tno1661656021416451
BPUM315750:0:Tyes700701-0------
BQUI283165:0:Tyes14--13111291660
BSP36773:0:Tyes--------0-
BSP36773:2:Tyes011121181161171142-117
BSP376:0:Tyes31345272629032736
BSUB:0:Tyes01----487---
BSUI204722:1:Tyes3536263432333037280
BSUI470137:0:Tno3334243229302735250
BTHA271848:1:Tno011231291271281252124128
BTHE226186:0:Tyes276114282289---01107--
BTHU281309:1:Tno785786-0------
BTHU412694:1:Tno727728-0------
BTRI382640:1:Tyes40--3937383542290
BTUR314724:0:Fyes-------0--
BVIE269482:7:Tyes01778381827927882
BWEI315730:4:Tyes959960-0------
BXEN266265:0:Tyes----0140---1
CABO218497:0:Tyes-1----8120813-
CACE272562:1:Tyes2012--0------
CAULO:0:Tyes2958-29502956029552952296029512045
CBEI290402:0:Tyes10--------
CBLO203907:0:Tyes--5-103-4-
CBLO291272:0:Tno--5-103-4-
CBOT36826:1:Tno18891890-0------
CBOT441770:0:Tyes18741875-0------
CBOT441771:0:Tno17321733-0------
CBOT441772:1:Tno18451846-0------
CBOT498213:1:Tno19201921-0------
CBOT508765:1:Tyes0---------
CBOT515621:2:Tyes20942095-0------
CBOT536232:0:Tno20952096-0------
CBUR227377:1:Tyes1417141521353142214210141411421
CBUR360115:1:Tno1481147921415148614850147811485
CBUR434922:2:Tno57152763011529815281
CCAV227941:1:Tyes-1----8490850-
CCHL340177:0:Tyes-2991758-17541753175608771753
CCON360104:2:Tyes-616-3280-216203-
CCUR360105:0:Tyes-600-123-01224168212230
CDES477974:0:Tyes01-----2--
CDIF272563:1:Tyes01-----2--
CDIP257309:0:Tyes-0-----1--
CEFF196164:0:Fyes-0-----1--
CFEL264202:1:Tyes-877----18780-
CFET360106:0:Tyes------12900-
CGLU196627:0:Tyes01-----2--
CHOM360107:1:Tyes-11-0--1281193129-
CHUT269798:0:Tyes3410-1028--1378212796-
CHYD246194:0:Tyes0------2--
CJAP155077:0:Tyes218-436073
CJEI306537:0:Tyes01-----2--
CJEJ192222:0:Tyes---822686701580167
CJEJ195099:0:Tno---910666501736165
CJEJ354242:2:Tyes---804--015191-
CJEJ360109:0:Tyes---654--018591-
CJEJ407148:0:Tno---832--015721-
CKLU431943:1:Tyes0---------
CMET456442:0:Tyes-1-----0--
CMIC31964:2:Tyes-------0--
CMIC443906:2:Tyes-------0--
CMUR243161:1:Tyes-0----1001101-
CNOV386415:0:Tyes0---------
CPEL335992:0:Tyes---274103-40
CPER195102:1:Tyes01--------
CPER195103:0:Tno01--------
CPER289380:3:Tyes01--------
CPHY357809:0:Tyes10-1649------
CPNE115711:1:Tyes-1----9510952-
CPNE115713:0:Tno-0----1711170-
CPNE138677:0:Tno-0----1731172-
CPNE182082:0:Tno-0----1741173-
CPRO264201:0:Fyes-1----187201873-
CPSY167879:0:Tyes3793786021437751
CRUT413404:0:Tyes----1921930-1193
CSAL290398:0:Tyes2193547084
CSP501479:7:Fyes---0214-51
CSP501479:8:Fyes01-----2--
CSP78:2:Tyes585584426158604266426358342623408
CTEP194439:0:Tyes-03719843653643671381369364
CTET212717:0:Tyes01--------
CTRA471472:0:Tyes-0----991100-
CTRA471473:0:Tno-0----991100-
CVES412965:0:Tyes3130--311312119-120312
CVIO243365:0:Tyes422542334-0454242353454
DARO159087:0:Tyes911064521215
DDES207559:0:Tyes7577580117820902089209275920932089
DETH243164:0:Tyes1620-----1--
DGEO319795:1:Tyes-398-1361---0--
DHAF138119:0:Tyes872873-0---874--
DNOD246195:0:Tyes56--341704
DOLE96561:0:Tyes--1-563026
DPSY177439:2:Tyes--6900687686689-1156686
DRAD243230:3:Tyes-828-461---0--
DRED349161:0:Tyes10641063-0---1062--
DSHI398580:5:Tyes21104658095
DSP216389:0:Tyes1620-----1--
DSP255470:0:Tno1620-----1--
DVUL882:1:Tyes1360-11760149422022206136322072202
ECAN269484:0:Tyes-------0568-
ECAR218491:0:Tyes2140214110251019102110201023214210240
ECHA205920:0:Tyes-------0418-
ECOL199310:0:Tno1421142270214142462867
ECOL316407:0:Tno1144114560214114752274
ECOL331111:6:Tno1280128160214128352601
ECOL362663:0:Tno1050105160214105352343
ECOL364106:1:Tno1331133270214133462690
ECOL405955:2:Tyes1102110360214110552431
ECOL409438:6:Tyes1254125560214125752539
ECOL413997:0:Tno1128112960214113152195
ECOL439855:4:Tno5415406021453852451
ECOL469008:0:Tno1057105621752181217921802177105421760
ECOL481805:0:Tno1091109022292235223322342231108822300
ECOL585034:0:Tno1218121960214122152411
ECOL585035:0:Tno1112111360214111552530
ECOL585055:0:Tno1310131160214131352666
ECOL585056:2:Tno1331133260214133452666
ECOL585057:0:Tno4914906021448852797
ECOL585397:0:Tno1310131160214131352869
ECOL83334:0:Tno1832183360214183553191
ECOLI:0:Tno1163116460214116752327
ECOO157:0:Tno--60214187353198
EFAE226185:3:Tyes10--------
EFER585054:1:Tyes3211441150114811491146011451733
ELIT314225:0:Tyes16071610-1426-14251420243601425
ERUM254945:0:Tyes-------0615-
ERUM302409:0:Tno-------0606-
ESP42895:1:Tyes1196119760214119852202
FALN326424:0:Tyes------0539--
FJOH376686:0:Tyes16641674-0---1396--
FMAG334413:1:Tyes0------2--
FNOD381764:0:Tyes-0-----936--
FNUC190304:0:Tyes1003------0121-
FPHI484022:1:Tyes12971145--452114305
FRANT:0:Tno----1761751780180175
FSP106370:0:Tyes------0424--
FSP1855:0:Tyes------4500--
FSUC59374:0:Tyes-2537-1117--124804
FTUL351581:0:Tno652524--10352250
FTUL393011:0:Tno603484--10348250
FTUL393115:0:Tyes3331--1761751780180175
FTUL401614:0:Tyes534667--10366950
FTUL418136:0:Tno0125--348349346127344349
FTUL458234:0:Tno625510--10350850
GBET391165:0:Tyes10621060-1063106510641067105910680
GFOR411154:0:Tyes96109-559--291101541-
GKAU235909:1:Tyes16501651-602--0---
GMET269799:1:Tyes2128012815279727962799027562796
GOXY290633:5:Tyes1141--1142114411431146113911470
GSUL243231:0:Tyes1045104425153418230104322683
GTHE420246:1:Tyes10861087-0------
GURA351605:0:Tyes1213121434754097341121504
GVIO251221:0:Tyes-23940-626--2816--
HACI382638:1:Tyes-602-198--05961-
HARS204773:0:Tyes2120282022202420232026020272023
HAUR316274:2:Tyes0220----22562480--
HCHE349521:0:Tyes7806452915
HDUC233412:0:Tyes10141015-1032103010311029010281031
HHAL349124:0:Tyes218-436073
HHEP235279:0:Tyes---459--06961-
HINF281310:0:Tyes01-7371726926872
HINF374930:0:Tyes7776-02147551
HINF71421:0:Tno01-6866676426367
HMAR272569:8:Tyes------0---
HMOD498761:0:Tyes21-----0--
HMUK485914:1:Tyes------0---
HNEP81032:0:Tyes2--57690106
HPY:0:Tno-380-0---375628-
HPYL357544:1:Tyes-393-0---390607-
HPYL85963:0:Tno-363-0---359601-
HSOM205914:1:Tyes1211-021425451
HSOM228400:0:Tno1514-0214165251
HWAL362976:1:Tyes------0---
ILOI283942:0:Tyes7806452915
JSP290400:1:Tyes2-13576110126
JSP375286:0:Tyes2121932187218921882191021922188
KPNE272620:2:Tyes0135433113353935383541235421193
KRAD266940:2:Fyes-2-----0--
LACI272621:0:Tyes10--------
LBIF355278:2:Tyes-------0--
LBIF456481:2:Tno-------0--
LBOR355276:1:Tyes-------0--
LBOR355277:1:Tno-------0--
LBRE387344:2:Tyes01--------
LCAS321967:1:Tyes0---------
LCHO395495:0:Tyes35053504148424920249314865333772493
LDEL321956:0:Tyes01--------
LDEL390333:0:Tyes01--------
LGAS324831:0:Tyes10--------
LHEL405566:0:Tyes-0--------
LINN272626:1:Tno01--------
LINT189518:1:Tyes-------0--
LINT267671:1:Tno-------0--
LINT363253:3:Tyes1075-0612582583580158579583
LJOH257314:0:Tyes10--------
LLAC272622:5:Tyes01--------
LLAC272623:0:Tyes01--------
LMON169963:0:Tno01--------
LMON265669:0:Tyes01--------
LPNE272624:0:Tno28917542882862872840755287
LPNE297245:1:Fno19717691982001992020770199
LPNE297246:1:Fyes28517792842822832800780283
LPNE400673:0:Tno28418012832812822790802282
LREU557436:0:Tyes10--------
LSAK314315:0:Tyes10--------
LSPH444177:1:Tyes-0--------
LWEL386043:0:Tyes01--------
LXYL281090:0:Tyes-------0--
MABS561007:1:Tyes0--1380------
MACE188937:0:Tyes------0---
MAER449447:0:Tyes43030--------
MAQU351348:2:Tyes7806452915
MAVI243243:0:Tyes01--------
MBAR269797:1:Tyes------0---
MBOV233413:0:Tno01-----2--
MBOV410289:0:Tno01-----2--
MBUR259564:0:Tyes------0---
MCAP243233:0:Tyes21103658095
MEXT419610:0:Tyes3819-389338166713814381103894672
MFLA265072:0:Tyes7857947787840783780795779783
MGIL350054:3:Tyes0------2--
MHUN323259:0:Tyes-1-----0--
MLEP272631:0:Tyes10--------
MLOT266835:2:Tyes101107452141205
MMAG342108:0:Tyes810075631126
MMAR368407:0:Tyes------0---
MMAR394221:0:Tyes7--6341904
MMAZ192952:0:Tyes------0---
MPET420662:1:Tyes029021021261926212620101915510202620
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