CANDIDATE ID: 159

CANDIDATE ID: 159

NUMBER OF GENES: 9
AVERAGE SCORE:    9.9924906e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7710 (gspK) (b3332)
   Products of gene:
     - G7710-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)

- G7709 (gspJ) (b3331)
   Products of gene:
     - G7709-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)

- G7708 (gspI) (b3330)
   Products of gene:
     - G7708-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)

- G7706 (gspG) (b3328)
   Products of gene:
     - G7706-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)

- G7705 (gspF) (b3327)
   Products of gene:
     - G7705-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)

- G7704 (gspE) (b3326)
   Products of gene:
     - G7704-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)

- G7703 (gspD) (b3325)
   Products of gene:
     - G7703-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)

- G7537 (yghF) (b2970)
   Products of gene:
     - G7537-MONOMER (predicted secretion pathway protein, C-type protein)

- G7535 (yghD) (b2968)
   Products of gene:
     - G7535-MONOMER (predicted secretion pathway protein, M-type protein, membrane anchored)



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ORGANISMS CONTAINING AT LEAST 8 GENES FROM THE GROUP:

Total number of orgs: 48
Effective number of orgs (counting one per cluster within 468 clusters): 29

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
VVUL216895 ncbi Vibrio vulnificus CMCP69
VVUL196600 ncbi Vibrio vulnificus YJ0169
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106338
VFIS312309 ncbi Vibrio fischeri ES1149
VCHO345073 ncbi Vibrio cholerae O3959
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169619
SSP94122 ncbi Shewanella sp. ANA-39
SSED425104 ncbi Shewanella sediminis HAW-EB39
SPEA398579 ncbi Shewanella pealeana ATCC 7003459
SONE211586 ncbi Shewanella oneidensis MR-19
SLOI323850 ncbi Shewanella loihica PV-49
SHAL458817 ncbi Shewanella halifaxensis HAW-EB49
SDEN318161 ncbi Shewanella denitrificans OS2178
SBAL402882 ncbi Shewanella baltica OS1859
SBAL399599 ncbi Shewanella baltica OS1959
PPRO298386 ncbi Photobacterium profundum SS99
PMEN399739 ncbi Pseudomonas mendocina ymp8
PING357804 ncbi Psychromonas ingrahamii 379
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1259
PATL342610 ncbi Pseudoalteromonas atlantica T6c9
PAER208964 ncbi Pseudomonas aeruginosa PAO18
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA148
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785789
ILOI283942 ncbi Idiomarina loihiensis L2TR9
HHAL349124 ncbi Halorhodospira halophila SL19
HCHE349521 ncbi Hahella chejuensis KCTC 23968
EFER585054 ncbi Escherichia fergusonii ATCC 354698
ECOL585397 ncbi Escherichia coli ED1a9
ECOL585057 ncbi Escherichia coli IAI399
ECOL585056 ncbi Escherichia coli UMN0268
ECOL585055 ncbi Escherichia coli 559899
ECOL585035 ncbi Escherichia coli S889
ECOL585034 ncbi Escherichia coli IAI19
ECOL469008 ncbi Escherichia coli BL21(DE3)9
ECOL439855 ncbi Escherichia coli SMS-3-59
ECOL413997 ncbi Escherichia coli B str. REL6069
ECOL409438 ncbi Escherichia coli SE118
ECOL405955 ncbi Escherichia coli APEC O19
ECOL364106 ncbi Escherichia coli UTI899
ECOL362663 ncbi Escherichia coli 5369
ECOL331111 ncbi Escherichia coli E24377A9
ECOL316407 ncbi Escherichia coli K-12 substr. W31109
ECOL199310 ncbi Escherichia coli CFT0738
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10439
CPSY167879 ncbi Colwellia psychrerythraea 34H9
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4499
AHYD196024 Aeromonas hydrophila dhakensis9
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-18


Names of the homologs of the genes in the group in each of these orgs
  G7710   G7709   G7708   G7706   G7705   G7704   G7703   G7537   G7535   
VVUL216895 VV1_0870VV1_0871VV1_0872VV1_0874VV1_0875VV1_0876VV1_0877VV1_0878VV1_0868
VVUL196600 VV0221VV0220VV0219VV0217VV0216VV0215VV0214VV0213VV0223
VPAR223926 VP0140VP0139VP0136VP0135VP0134VP0133VP0132VP0142
VFIS312309 VF2467VF2468VF2469VF2471VF2472VF2473VF2474VF2475VF2465
VCHO345073 VC0395_A2299VC0395_A2300VC0395_A2301VC0395_A2303VC0395_A2304VC0395_A2305VC0395_A2306VC0395_A2307VC0395_A2297
VCHO VC2726VC2727VC2728VC2730VC2731VC2732VC2630VC2734VC2724
SSP94122 SHEWANA3_0158SHEWANA3_0157SHEWANA3_0156SHEWANA3_0154SHEWANA3_0153SHEWANA3_0152SHEWANA3_0151SHEWANA3_0150SHEWANA3_0160
SSED425104 SSED_4351SSED_4352SSED_4353SSED_4355SSED_4356SSED_4357SSED_4358SSED_4359SSED_4349
SPEA398579 SPEA_0151SPEA_0150SPEA_0149SPEA_0147SPEA_0146SPEA_0145SPEA_0144SPEA_0143SPEA_0153
SONE211586 SO_0173SO_0172SO_0171SO_0169SO_0168SO_0167SO_0166SO_0165SO_0175
SLOI323850 SHEW_3612SHEW_3613SHEW_3614SHEW_3616SHEW_3617SHEW_3618SHEW_3619SHEW_3620SHEW_3610
SHAL458817 SHAL_4167SHAL_4168SHAL_4169SHAL_4171SHAL_4172SHAL_4173SHAL_4174SHAL_4175SHAL_4165
SDEN318161 SDEN_0128SDEN_0126SDEN_0124SDEN_0123SDEN_0122SDEN_0121SDEN_0120SDEN_0130
SBAL402882 SHEW185_0156SHEW185_0155SHEW185_0154SHEW185_0152SHEW185_0151SHEW185_0150SHEW185_0149SHEW185_0148SHEW185_0158
SBAL399599 SBAL195_0160SBAL195_0159SBAL195_0158SBAL195_0156SBAL195_0155SBAL195_0154SBAL195_0153SBAL195_0152SBAL195_0162
PPRO298386 PBPRA3474PBPRA3475PBPRA3476PBPRA3478PBPRA3479PBPRA3480PBPRA3481PBPRA3482PBPRA3472
PMEN399739 PMEN_2919PMEN_2920PMEN_2921PMEN_2923PMEN_2924PMEN_2925PMEN_2927PMEN_2917
PING357804 PING_0104PING_0103PING_0102PING_0100PING_0099PING_0098PING_0097PING_0096PING_0106
PHAL326442 PSHAA0239PSHAA0238PSHAA0237PSHAA0235PSHAA0234PSHAA0233PSHAA0232PSHAA0231PSHAA0241
PATL342610 PATL_0238PATL_0237PATL_0236PATL_0234PATL_0233PATL_0232PATL_0231PATL_0230PATL_0240
PAER208964 PA3097PA3098PA3099PA3101PA3102PA3103PA3105PA3095
PAER208963 PA14_24070PA14_24060PA14_24050PA14_24020PA14_24010PA14_23990PA14_23970PA14_24100
KPNE272620 GKPORF_B4438GKPORF_B4439GKPORF_B4440GKPORF_B4442GKPORF_B4443GKPORF_B4444GKPORF_B4445GKPORF_B4446GKPORF_B4436
ILOI283942 IL2019IL2020IL2021IL2023IL2024IL2025IL2026IL2027IL2017
HHAL349124 HHAL_2389HHAL_2375HHAL_2374HHAL_2372HHAL_2371HHAL_2377HHAL_2370HHAL_2376HHAL_2387
HCHE349521 HCH_03930HCH_03931HCH_03935HCH_03936HCH_03937HCH_04610HCH_03938HCH_03928
EFER585054 EFER_2922EFER_2921EFER_2918EFER_2917EFER_2916EFER_2915EFER_2914EFER_2924
ECOL585397 ECED1_3605ECED1_3996ECED1_3995ECED1_3993ECED1_3992ECED1_3991ECED1_3990ECED1_3613ECED1_3603
ECOL585057 ECIAI39_3449ECIAI39_3450ECIAI39_3451ECIAI39_3453ECIAI39_3454ECIAI39_3455ECIAI39_3456ECIAI39_3457ECIAI39_3447
ECOL585056 ECUMN_3437ECUMN_3438ECUMN_3441ECUMN_3442ECUMN_3443ECUMN_3444ECUMN_3445ECUMN_3435
ECOL585055 EC55989_3371EC55989_3372EC55989_3373EC55989_3375EC55989_3376EC55989_3377EC55989_3378EC55989_3379EC55989_3369
ECOL585035 ECS88_3720ECS88_3719ECS88_3718ECS88_3716ECS88_3715ECS88_3714ECS88_3713ECS88_3345ECS88_3335
ECOL585034 ECIAI1_3103ECIAI1_3104ECIAI1_3105ECIAI1_3107ECIAI1_3108ECIAI1_3109ECIAI1_3110ECIAI1_3111ECIAI1_3101
ECOL469008 ECBD_0419ECBD_0420ECBD_0421ECBD_0423ECBD_0424ECBD_0425ECBD_0426ECBD_0768ECBD_0770
ECOL439855 ECSMS35_3240ECSMS35_3241ECSMS35_3242ECSMS35_3244ECSMS35_3245ECSMS35_3246ECSMS35_3247ECSMS35_3248ECSMS35_3238
ECOL413997 ECB_03183ECB_03182ECB_03181ECB_03179ECB_03178ECB_03177ECB_03176ECB_02839ECB_02829
ECOL409438 ECSE_3238ECSE_3240ECSE_3242ECSE_3243ECSE_3244ECSE_3245ECSE_3246ECSE_3236
ECOL405955 APECO1_3120APECO1_3121APECO1_3122APECO1_3124APECO1_3125APECO1_3126APECO1_3127APECO1_3457APECO1_3467
ECOL364106 UTI89_C3787UTI89_C3786UTI89_C3785UTI89_C3783UTI89_C3782UTI89_C3781UTI89_C3780UTI89_C3386UTI89_C3376
ECOL362663 ECP_3420ECP_3419ECP_3418ECP_3416ECP_3415ECP_3414ECP_3413ECP_3047ECP_3037
ECOL331111 ECE24377A_3420ECE24377A_3421ECE24377A_3422ECE24377A_3424ECE24377A_3425ECE24377A_3426ECE24377A_3427ECE24377A_3428ECE24377A_3418
ECOL316407 ECK3319:JW3294:B3332ECK3318:JW3293:B3331ECK3317:JW5706:B3330ECK3315:JW3290:B3328ECK3314:JW3289:B3327ECK3313:JW3288:B3326ECK3312:JW5707:B3325ECK2965:JW5484:B2970ECK2963:JW2935:B2968
ECOL199310 C4103C4102C4101C4099C4098C4097C4096C3699
ECAR218491 ECA3102ECA3103ECA3104ECA3106ECA3107ECA3108ECA3109ECA3110ECA3100
CPSY167879 CPS_4584CPS_4585CPS_4586CPS_4588CPS_4589CPS_4590CPS_4591CPS_4592CPS_4582
ASAL382245 ASA_3782ASA_3781ASA_3780ASA_3778ASA_3777ASA_3776ASA_3775ASA_3774ASA_3784
AHYD196024 AHA_0576AHA_0575AHA_0574AHA_0572AHA_0571AHA_0570AHA_0569AHA_0568AHA_0578
AEHR187272 MLG_2388MLG_2389MLG_2391MLG_2392MLG_2399MLG_2401MLG_2402MLG_2384


Organism features enriched in list (features available for 47 out of the 48 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0098421292
Disease:Cholera 0.006371822
Disease:Gastroenteritis 0.0002064613
Disease:Urinary_tract_infection 0.001824334
Disease:opportunistic_infections 0.004214235
Disease:primary_septicemia 0.006371822
Disease:wound_infections 0.006371822
GC_Content_Range4:0-40 7.711e-82213
GC_Content_Range4:40-60 7.940e-1240224
GC_Content_Range4:60-100 0.00730165145
GC_Content_Range7:30-40 0.00001412166
GC_Content_Range7:40-50 0.000461719117
GC_Content_Range7:50-60 9.121e-621107
Genome_Size_Range5:2-4 0.00002664197
Genome_Size_Range5:4-6 3.615e-1439184
Genome_Size_Range9:2-3 0.00104952120
Genome_Size_Range9:5-6 1.308e-122788
Gram_Stain:Gram_Neg 3.371e-1146333
Habitat:Aquatic 0.00503441491
Habitat:Host-associated 0.00082047206
Motility:No 7.005e-61151
Motility:Yes 4.815e-1344267
Optimal_temp.:10 0.006371822
Optimal_temp.:20-30 0.001039147
Oxygen_Req:Aerobic 0.00128226185
Oxygen_Req:Anaerobic 0.00086121102
Oxygen_Req:Facultative 1.184e-1239201
Pathogenic_in:No 0.009394311226
Shape:Rod 2.777e-642347
Temp._range:Psychrophilic 0.000013669



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 367
Effective number of orgs (counting one per cluster within 468 clusters): 282

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TSP28240 Thermotoga sp.1
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB81
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1011
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT21
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93111
SSP644076 Silicibacter sp. TrichCH4B0
SSP292414 ncbi Ruegeria sp. TM10400
SSP1131 Synechococcus sp. CC96050
SSON300269 ncbi Shigella sonnei Ss0461
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae1
SMUT210007 ncbi Streptococcus mutans UA1591
SMEL266834 ncbi Sinorhizobium meliloti 10210
SMED366394 ncbi Sinorhizobium medicae WSM4190
SMAR399550 ncbi Staphylothermus marinus F10
SLAC55218 Ruegeria lacuscaerulensis0
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SGLO343509 ncbi Sodalis glossinidius morsitans1
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4761
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B671
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91501
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT181
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty21
SCO ncbi Streptomyces coelicolor A3(2)0
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170250
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170290
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.10
RSP357808 ncbi Roseiflexus sp. RS-10
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111700
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38410
RFEL315456 ncbi Rickettsia felis URRWXCal20
RETL347834 ncbi Rhizobium etli CFN 421
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP56811 Psychrobacter sp.1
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMUL272843 ncbi Pasteurella multocida multocida Pm701
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8311
OCAR504832 ncbi Oligotropha carboxidovorans OM50
OANT439375 ncbi Ochrobactrum anthropi ATCC 491880
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101520
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E1
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP400668 ncbi Marinomonas sp. MWYL10
MSP266779 ncbi Chelativorans sp. BNC10
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MEXT419610 ncbi Methylobacterium extorquens PA11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-411
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM1
JSP290400 ncbi Jannaschia sp. CCS10
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23361
HSOM205914 ncbi Haemophilus somnus 129PT1
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW201
HINF374930 ncbi Haemophilus influenzae PittEE1
HINF281310 ncbi Haemophilus influenzae 86-028NP1
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HDUC233412 ncbi Haemophilus ducreyi 35000HP1
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GOXY290633 ncbi Gluconobacter oxydans 621H1
GFOR411154 ncbi Gramella forsetii KT08030
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI30
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ESP42895 Enterobacter sp.1
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5831
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP501479 Citreicella sp. SE451
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10621
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3811
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138261
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC1
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3311
CBUR227377 ncbi Coxiella burnetii RSA 4931
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
BXEN266265 ncbi Burkholderia xenovorans LB4000
BWEI315730 ncbi Bacillus weihenstephanensis KBAB40
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHU412694 ncbi Bacillus thuringiensis Al Hakam1
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-271
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSUB ncbi Bacillus subtilis subtilis 1680
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145800
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BHAL272558 ncbi Bacillus halodurans C-1251
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1021
BCER405917 Bacillus cereus W0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-981
BCER288681 ncbi Bacillus cereus E33L0
BCER226900 ncbi Bacillus cereus ATCC 145790
BCAN483179 ncbi Brucella canis ATCC 233650
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02480
BANT568206 ncbi Bacillus anthracis CDC 6840
BANT261594 ncbi Bacillus anthracis Ames Ancestor0
BANT260799 ncbi Bacillus anthracis Sterne0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.0
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL031
APLE416269 ncbi Actinobacillus pleuropneumoniae L201
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40181
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  G7710   G7709   G7708   G7706   G7705   G7704   G7703   G7537   G7535   
ZMOB264203
WSUC273121 WS0543
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TSP28240 TRQ2_0090
TROS309801
TPEN368408
TPAL243276
TMAR243274 TM_0837
TKOD69014
TFUS269800
TERY203124 TERY_1748
TDEN326298 TMDEN_1387
TDEN243275
TACI273075
STYP99287 STM3488
STRO369723
STOK273063
STHE322159
STHE299768
STHE292459
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471 GSYN0691
SSP644076
SSP292414
SSP1131
SSON300269 SSO_0116
SSOL273057
SSAP342451
SRUB309807
SPYO370554 MGAS10750_SPY0095
SPYO370553 MGAS2096_SPY0091
SPYO370552 MGAS10270_SPY0090
SPYO370551 MGAS9429_SPY0089
SPYO319701 M28_SPY0086
SPYO293653 M5005_SPY0088
SPYO286636 M6_SPY0136
SPYO198466 SPYM3_0080
SPYO193567
SPYO186103 SPYM18_0105
SPYO160490 SPY0103
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313 SPJ_2057
SMUT210007 SMU_1984
SMEL266834
SMED366394
SMAR399550
SLAC55218
SHAE279808
SGOR29390
SGLO343509 SG1282
SERY405948
SEPI176280
SEPI176279
SENT454169 SEHA_C3794
SENT321314 SCH_3420
SENT295319 SPA3353
SENT220341 STY4308
SENT209261 T4018
SCO
SAVE227882
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SAGA211110
SAGA208435
SAGA205921
SACI330779
RTYP257363
RSPH349102
RSPH349101
RSPH272943
RSP357808
RSP101510
RSAL288705
RRUB269796
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057
RPAL258594
RMAS416276
RLEG216596
RFEL315456
RETL347834 RHE_PE00306
RDEN375451
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PTOR263820
PSP56811 PSYCPRWF_0150
PSP312153
PRUM264731
PPEN278197
PMUL272843 PM1225
PMOB403833
PMAR93060
PMAR74546 PMT9312_1187
PMAR59920
PMAR167555
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225 PLUT_0659
PISL384616
PINT246198
PHOR70601
PGIN242619
PFUR186497
PDIS435591
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844
OTSU357244
OIHE221109 OB1910
OCAR504832
OANT439375
NWIN323098
NSEN222891
NPHA348780
NFAR247156
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSUC221988 MS1970
MSTA339860
MSP400668
MSP266779
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MEXT419610 MEXT_0031
MCAP340047
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAEO419665
MACE188937
MABS561007
LXYL281090
LWEL386043
LSPH444177 BSPH_3614
LSAK314315
LREU557436
LPLA220668 LP_2247
LMON265669
LMON169963
LMES203120
LLAC272623
LLAC272622 LACR_2425
LJOH257314
LINT363253
LINN272626
LHEL405566 LHV_0780
LGAS324831
LDEL390333 LDB0681
LDEL321956 LBUL_0612
LCAS321967
LBRE387344
LACI272621 LBA0737
JSP290400
IHOS453591
HWAL362976
HSP64091
HSOM228400 HSM_1067
HSOM205914 HS_1112
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HINF71421 HI_0435
HINF374930 CGSHIEE_00815
HINF281310 NTHI0560
HHEP235279
HDUC233412 HD_0434
HBUT415426
HAUR316274
HACI382638
GOXY290633 GOX0992
GFOR411154
FSP1855 FRANEAN1_2610
FSP106370
FNUC190304
FJOH376686
FALN326424
ESP42895 ENT638_0650
ERUM302409
ERUM254945
ELIT314225
EFAE226185 EF_2044
ECHA205920
ECAN269484
DSP255470 CBDBA1303
DSP216389 DEHABAV1_1164
DSHI398580
DDES207559
CVES412965
CTRA471473 CTLON_0828
CTRA471472 CTL0834
CTET212717
CTEP194439
CSUL444179
CSP501479 CSE45_5461
CRUT413404
CPNE182082 CPB0845
CPNE138677 CPJ0816
CPNE115713 CPN0816
CPNE115711 CP_1055
CPHY357809
CPEL335992 SAR11_0058
CMUR243161 TC_0860
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943 CKL_1113
CJEJ407148 C8J_1259
CJEJ360109 JJD26997_0367
CJEJ354242 CJJ81176_1342
CJEJ195099 CJE_1532
CJEJ192222 CJ1343C
CJEI306537
CHUT269798
CHOM360107 CHAB381_1565
CGLU196627
CFEL264202 CF0067
CEFF196164
CDIP257309
CCUR360105 CCV52592_1963
CCON360104 CCC13826_1109
CCHL340177
CCAV227941 CCA_00947
CBUR434922
CBUR360115 COXBURSA331_A2096
CBUR227377 CBU_1891
CBLO291272
CBLO203907
CACE272562 CAC0989
BXEN266265
BWEI315730
BTUR314724
BTRI382640
BTHU412694 BALH_3838
BTHU281309 BT9727_3983
BTHE226186
BSUI470137
BSUI204722
BSUB
BSP107806
BQUI283165
BPUM315750
BPER257313
BPAR257311
BOVI236
BMEL359391
BMEL224914
BLON206672
BLIC279010
BHER314723
BHEN283166
BHAL272558 BH2827
BGAR290434
BFRA295405
BFRA272559
BCLA66692
BCIC186490
BCER572264 BCA_4351
BCER405917
BCER315749 BCER98_2926
BCER288681
BCER226900
BCAN483179
BBUR224326
BBRO257310
BBAC360095
BAPH372461
BAPH198804
BANT592021
BANT568206
BANT261594
BANT260799
BAMY326423
BAFZ390236
BABO262698
AYEL322098
AURANTIMONAS
ASP1667
APLE434271 APJL_0201
APLE416269 APL_0200
APHA212042
APER272557
ANAE240017
AMAR234826
ALAI441768
AFUL224325
ACAU438753
ABUT367737 ABU_1833
AAUR290340


Organism features enriched in list (features available for 343 out of the 367 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00020886992
Arrangment:Clusters 0.00127941617
Disease:Food_poisoning 0.008083899
Disease:Gastroenteritis 0.0076359313
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00273361111
Disease:Wide_range_of_infections 0.00273361111
Endospores:No 9.168e-12162211
GC_Content_Range4:0-40 2.045e-16171213
GC_Content_Range4:40-60 1.254e-7102224
GC_Content_Range4:60-100 0.000958670145
GC_Content_Range7:30-40 2.301e-14137166
GC_Content_Range7:50-60 4.475e-838107
GC_Content_Range7:60-70 0.000295562134
Genome_Size_Range5:0-2 3.148e-21138155
Genome_Size_Range5:4-6 1.206e-1073184
Genome_Size_Range5:6-10 0.00158361847
Genome_Size_Range9:0-1 3.882e-72727
Genome_Size_Range9:1-2 1.728e-14111128
Genome_Size_Range9:2-3 0.002871083120
Genome_Size_Range9:3-4 0.00020163177
Genome_Size_Range9:4-5 0.00009404096
Genome_Size_Range9:5-6 6.627e-63388
Genome_Size_Range9:6-8 0.00094461338
Gram_Stain:Gram_Neg 3.678e-16149333
Gram_Stain:Gram_Pos 3.065e-12123150
Habitat:Aquatic 0.00484174391
Habitat:Host-associated 1.998e-8152206
Habitat:Multiple 0.000220786178
Motility:No 4.700e-10120151
Motility:Yes 6.265e-11119267
Optimal_temp.:- 0.0003434132257
Optimal_temp.:25-35 0.00542171314
Optimal_temp.:30-37 0.00078261718
Optimal_temp.:37 0.000956176106
Oxygen_Req:Aerobic 0.003207695185
Pathogenic_in:Human 0.0025649140213
Pathogenic_in:Plant 0.0087871415
Shape:Coccus 0.00001636582
Shape:Irregular_coccus 0.00127941617
Shape:Rod 6.490e-11167347



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 1
Effective number of orgs (counting one per cluster within 468 clusters): 1

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
HHAL349124 ncbi Halorhodospira halophila SL1 0.007501613809


Names of the homologs of the genes in the group in each of these orgs
  G7710   G7709   G7708   G7706   G7705   G7704   G7703   G7537   G7535   
HHAL349124 HHAL_2389HHAL_2375HHAL_2374HHAL_2372HHAL_2371HHAL_2377HHAL_2370HHAL_2376HHAL_2387


Organism features enriched in list (features available for 1 out of the 1 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  



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ORGANISMS DEPLETED FOR GROUP:

Total number of orgs: 5
Effective number of orgs (counting one per cluster within 468 clusters): 3

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT2 0.008844635441
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL476 0.006868535741
ECOO157 ncbi Escherichia coli O157:H7 EDL933 0.002497039702
ECOL83334 Escherichia coli O157:H7 0.002156039812
SSON300269 ncbi Shigella sonnei Ss046 0.001715237221


Organism features enriched in list (features available for 4 out of the 5 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Gastroenteritis_and_food_poisoning 0.006861111
Disease:Hemorrhagic_colitis 0.006861111
GC_Content_Range7:50-60 0.00108324107
Genome_Size_Range5:4-6 0.00970114184



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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
AST-PWY (arginine degradation II (AST pathway))120440.5305
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50240.4464
PWY0-1338 (biosynthesis of 4-amino-4-deoxy-L-arabinose-modified lipid A)21140.4130
LACTOSEUTIL-PWY (lactose degradation II)53230.4081
FUC-RHAMCAT-PWY (superpathway of fucose and rhamnose degradation)19130.4038



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7709   G7708   G7706   G7705   G7704   G7703   G7537   G7535   
G77100.9993920.9992180.9993820.9993360.9993230.9991770.9989410.999182
G77090.9992620.9993110.9992640.9992210.9990520.998810.99901
G77080.999290.9992170.999150.9990510.9987090.998897
G77060.9998220.9998110.9996880.9991010.999172
G77050.9999120.9996910.9991550.999125
G77040.9997880.9992710.999123
G77030.999310.999039
G75370.998763
G7535



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PAIRWISE BLAST SCORES:

  G7710   G7709   G7708   G7706   G7705   G7704   G7703   G7537   G7535   
G77100.0f0--------
G7709-0.0f0-------
G7708--0.0f0------
G7706---0.0f0-----
G7705----0.0f0----
G7704-----0.0f0---
G7703------0.0f0--
G7537-------0.0f0-
G7535--------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-3382 (GspC-O secreton  complex) (degree of match pw to cand: 0.583, degree of match cand to pw: 0.778, average score: 0.987)
  Genes in pathway or complex:
             0.9854 0.9459 EG11359 (gspO) EG11359-MONOMER (leader peptidase, integral membrane protein)
             0.9840 0.9636 EG12173 (gspM) EG12173-MONOMER (putative protein secretion protein)
             0.9986 0.9982 G7711 (gspL) G7711-MONOMER (putative protein secretion protein for export)
   *in cand* 0.9993 0.9989 G7710 (gspK) G7710-MONOMER (putative protein secretion protein for export)
   *in cand* 0.9993 0.9988 G7709 (gspJ) G7709-MONOMER (putative protein secretion protein for export)
   *in cand* 0.9992 0.9987 G7708 (gspI) G7708-MONOMER (putative protein secretion protein for export)
             0.9146 0.7683 G7707 (gspH) G7707-MONOMER (putative protein secretion protein for export)
   *in cand* 0.9995 0.9991 G7706 (gspG) G7706-MONOMER (putative protein secretion protein for export)
   *in cand* 0.9995 0.9991 G7705 (gspF) G7705-MONOMER (putative protein secretion protein for export)
   *in cand* 0.9995 0.9991 G7704 (gspE) G7704-MONOMER (putative protein secretion protein for export)
   *in cand* 0.9994 0.9990 G7703 (gspD) G7703-MONOMER (putative protein secretion protein for export)
             0.9977 0.9962 G7702 (gspC) G7702-MONOMER (putative protein secretion protein for export)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9988 G7535 (yghD) G7535-MONOMER (predicted secretion pathway protein, M-type protein, membrane anchored)
   *in cand* 0.9991 0.9987 G7537 (yghF) G7537-MONOMER (predicted secretion pathway protein, C-type protein)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G7703 G7704 G7705 G7706 G7708 G7709 G7710 (centered at G7706)
G7535 G7537 (centered at G7537)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7710   G7709   G7708   G7706   G7705   G7704   G7703   G7537   G7535   
76/62362/62359/623265/623237/623248/623225/62353/62371/623
AAEO224324:0:Tyes---0223741604740-
AAVE397945:0:Tyes---9300301--
ABAC204669:0:Tyes---0213215296--
ABAU360910:0:Tyes---10021--
ABOR393595:0:Tyes---90290190010-
ABUT367737:0:Tyes------0--
ACEL351607:0:Tyes----02---
ACRY349163:8:Tyes---09102--
ADEH290397:0:Tyes---0123--
AEHR187272:0:Tyes-45781517180
AFER243159:0:Tyes----0757225--
AHYD196024:0:Tyes8764321010
AMAR329726:9:Tyes---92202024---
AMET293826:0:Tyes---013---
AORE350688:0:Tyes----02---
APLE416269:0:Tyes------0--
APLE434271:0:Tno------0--
ASAL382245:5:Tyes8764321010
ASP232721:2:Tyes---12034--
ASP62928:0:Tyes---0115011491565--
ASP62977:0:Tyes1926--10710625400--
ASP76114:2:Tyes-0-3456--
AVAR240292:3:Tyes---02931---
BAMB339670:3:Tno---68910-0
BAMB398577:3:Tno---68910-0
BBAC264462:0:Tyes---0456--
BCEN331271:2:Tno---4210-10
BCEN331272:3:Tyes---68910-0
BCER315749:1:Tyes---0-----
BCER572264:1:Tno---0-----
BHAL272558:0:Tyes---0-----
BJAP224911:0:Fyes---0-23--
BMAL243160:1:Tno---68910-0
BMAL320388:1:Tno---68910-0
BMAL320389:1:Tyes---4210-10
BPET94624:0:Tyes---01089--
BPSE272560:1:Tyes---4210-10
BPSE320372:1:Tno---4210-10
BPSE320373:1:Tno---5210-9
BSP36773:1:Tyes----0----
BSP36773:2:Tyes---6-910-0
BSP376:0:Tyes---4481248130--
BTHA271848:1:Tno---4210-10
BTHU281309:1:Tno---0-----
BTHU412694:1:Tno---0-----
BVIE269482:7:Tyes---68910-0
CABO218497:0:Tyes---0-2---
CACE272562:1:Tyes---0-----
CAULO:0:Tyes7653210--
CBEI290402:0:Tyes----01---
CBOT36826:1:Tno---0-2---
CBOT441770:0:Tyes---0-2---
CBOT441771:0:Tno---0-2---
CBOT441772:1:Tno---0-2---
CBOT498213:1:Tno---0-12---
CBOT508765:1:Tyes----01---
CBOT515621:2:Tyes---0-17---
CBOT536232:0:Tno---0-2---
CBUR227377:1:Tyes------0--
CBUR360115:1:Tno------0--
CCAV227941:1:Tyes-----0---
CCON360104:2:Tyes---0-----
CCUR360105:0:Tyes----0----
CDES477974:0:Tyes---01210---
CDIF272563:1:Tyes---012151216---
CFEL264202:1:Tyes-----0---
CFET360106:0:Tyes---0--141--
CHOM360107:1:Tyes---0-----
CHYD246194:0:Tyes---320---
CJAP155077:0:Tyes01-45678-
CJEJ192222:0:Tyes---0-----
CJEJ195099:0:Tno---0-----
CJEJ354242:2:Tyes---0-----
CJEJ360109:0:Tyes---0-----
CJEJ407148:0:Tno---0-----
CKLU431943:1:Tyes-----0---
CMUR243161:1:Tyes-----0---
CNOV386415:0:Tyes----10---
CPEL335992:0:Tyes----0----
CPER195102:1:Tyes----01---
CPER195103:0:Tno---034---
CPER289380:3:Tyes----01---
CPNE115711:1:Tyes-----0---
CPNE115713:0:Tno-----0---
CPNE138677:0:Tno-----0---
CPNE182082:0:Tno-----0---
CPRO264201:0:Fyes----4324330--
CPSY167879:0:Tyes2346789100
CSAL290398:0:Tyes---1600160216010--
CSP501479:1:Fyes------0--
CSP78:2:Tyes---2109--
CTRA471472:0:Tyes-----0---
CTRA471473:0:Tno-----0---
CVIO243365:0:Tyes--02345--
DARO159087:0:Tyes---30336827690--
DETH243164:0:Tyes---80----
DGEO319795:1:Tyes---17664930---
DHAF138119:0:Tyes---0-29---
DNOD246195:0:Tyes----749-0--
DOLE96561:0:Tyes---013109--
DPSY177439:2:Tyes----5720---
DRAD243230:3:Tyes----099---
DRED349161:0:Tyes---01210---
DSP216389:0:Tyes----0----
DSP255470:0:Tno----0----
DVUL882:1:Tyes----01---
ECAR218491:0:Tyes2346789100
ECOL199310:0:Tno393392391389388387386-0
ECOL316407:0:Tno97297397497697797897910
ECOL331111:6:Tno2346789100
ECOL362663:0:Tno385384383381380379378100
ECOL364106:1:Tno407406405403402401400100
ECOL405955:2:Tyes355353352350349348347100
ECOL409438:6:Tyes2-46789100
ECOL413997:0:Tno36236136035835735635590
ECOL439855:4:Tno2346789100
ECOL469008:0:Tno0124567357359
ECOL481805:0:Tno0124567--
ECOL585034:0:Tno2346789100
ECOL585035:0:Tno382381380378377376375100
ECOL585055:0:Tno2346789100
ECOL585056:2:Tno23-6789100
ECOL585057:0:Tno2346789100
ECOL585397:0:Tno2388387385384383382100
ECOL83334:0:Tno---0--4565--
ECOLI:0:Tno36336236135935835735610
ECOO157:0:Tno---0--4586--
EFAE226185:3:Tyes---0-----
EFER585054:1:Tyes87-4321010
ESP42895:1:Tyes----0----
FMAG334413:1:Tyes---330-0---
FNOD381764:0:Tyes----11610---
FPHI484022:1:Tyes----113-0--
FRANT:0:Tno---0843-860--
FSP1855:0:Tyes---0-----
FSUC59374:0:Tyes---01305-476--
FTUL351581:0:Tno---0570-553--
FTUL393011:0:Tno---0540-522--
FTUL393115:0:Tyes---0834-851--
FTUL401614:0:Tyes---01037-1058--
FTUL418136:0:Tno---5520-19--
FTUL458234:0:Tno---0570-550--
GBET391165:0:Tyes---11109--
GKAU235909:1:Tyes----02---
GMET269799:1:Tyes7-53210--
GOXY290633:5:Tyes---0-----
GSUL243231:0:Tyes---0123--
GTHE420246:1:Tyes----02---
GURA351605:0:Tyes---0123--
GVIO251221:0:Tyes---2540176817700--
HARS204773:0:Tyes---110607891110--
HCHE349521:0:Tyes23-67867090
HDUC233412:0:Tyes------0--
HHAL349124:0:Tyes19542170617
HINF281310:0:Tyes------0--
HINF374930:0:Tyes------0--
HINF71421:0:Tno------0--
HMOD498761:0:Tyes---013---
HNEP81032:0:Tyes8--43210-
HSOM205914:1:Tyes------0--
HSOM228400:0:Tno------0--
ILOI283942:0:Tyes2346789100
JSP375286:0:Tyes----10370--
KPNE272620:2:Tyes2346789100
KRAD266940:2:Fyes---269026890---
LACI272621:0:Tyes---0-----
LBIF355278:2:Tyes---3210--
LBIF456481:2:Tno---3210--
LBOR355276:1:Tyes---0123--
LBOR355277:1:Tno---0123--
LCHO395495:0:Tyes---01098--
LDEL321956:0:Tyes---0-----
LDEL390333:0:Tyes---0-----
LHEL405566:0:Tyes---0-----
LINT189518:1:Tyes---0123--
LINT267671:1:Tno---3210--
LLAC272622:5:Tyes---0-----
LPLA220668:0:Tyes---0-----
LPNE272624:0:Tno--41434401-555
LPNE297245:1:Fno--39414201-562
LPNE297246:1:Fyes--41434401-570
LPNE400673:0:Tno--41434401-574
LSPH444177:1:Tyes---0-----
MAER449447:0:Tyes---427620---
MAQU351348:2:Tyes654210671--
MCAP243233:0:Tyes---2109--
MEXT419610:0:Tyes------0--
MFLA265072:0:Tyes---27810314--
MLOT266835:2:Tyes---5107--
MMAR394221:0:Tyes7--3210--
MPET420662:1:Tyes---01098--
MSP409:2:Tyes---789-7960--
MSUC221988:0:Tyes------0--
MTHE264732:0:Tyes---013---
MXAN246197:0:Tyes---1261012--
NARO279238:0:Tyes0--1289129012911292--
NEUR228410:0:Tyes---10260666109--
NEUT335283:2:Tyes---0525-1283--
NGON242231:0:Tyes---3401439-0--
NHAM323097:2:Tyes---0123--
NMEN122586:0:Tno----0-1425--
NMEN122587:0:Tyes---4321430-0--
NMEN272831:0:Tno---01428----
NMEN374833:0:Tno---428137413780--
NMUL323848:3:Tyes0-241098--
NOCE323261:1:Tyes---2103210421050--
NSP103690:6:Tyes---018951897---
NSP35761:1:Tyes---067---
NSP387092:0:Tyes-----0560--
OIHE221109:0:Tyes---0-----
PAER208963:0:Tyes8764320-10
PAER208964:0:Tno23467810-0
PARC259536:0:Tyes----01---
PATL342610:0:Tyes8764321010
PCAR338963:0:Tyes----177301760--
PCRY335284:1:Tyes--12758701698--
PENT384676:0:Tyes1918--1822018241825--
PFLU205922:0:Tyes---6012--
PFLU216595:1:Tyes---078154--
PFLU220664:0:Tyes-0-41098--
PHAL326442:1:Tyes8764321010
PING357804:0:Tyes8764321010
PLUM243265:0:Fyes---3604-36050--
PLUT319225:0:Tyes------0--
PMAR167546:0:Tyes---130----
PMAR74546:0:Tyes----0----
PMAR74547:0:Tyes---252-0---
PMEN399739:0:Tyes23467810-0
PMUL272843:1:Tyes------0--
PNAP365044:8:Tyes---10012--
PPRO298386:2:Tyes2346789100
PPUT160488:0:Tno0--7654--
PPUT351746:0:Tyes0--7654--
PPUT76869:0:Tno0--7654--
PSP117:0:Tyes---1219052165488--
PSP296591:2:Tyes---01098--
PSP56811:2:Tyes----0----
PSTU379731:0:Tyes6542101654--
PSYR205918:0:Tyes---2743274427450--
PSYR223283:2:Tyes---0121792--
PTHE370438:0:Tyes----20---
RALB246199:0:Tyes----24970---
RETL347834:3:Tyes------0--
REUT264198:3:Tyes---01098--
REUT381666:2:Tyes---01098-6
RFER338969:1:Tyes---01098--
RMET266264:2:Tyes---01098-6
RPAL316055:0:Tyes---0-28--
RPAL316056:0:Tyes---0123--
RSOL267608:1:Tyes---01098-6
RXYL266117:0:Tyes---068---
SACI56780:0:Tyes---3210--
SALA317655:1:Tyes7--3210--
SBAL399599:3:Tyes8764321010
SBAL402882:1:Tno8764321010
SBOY300268:1:Tyes6--210--8
SDEG203122:0:Tyes0--45678-
SDEN318161:0:Tyes8-64321010
SDYS300267:1:Tyes8--4321010
SELO269084:0:Tyes---0594592216--
SENT209261:0:Tno------0--
SENT220341:0:Tno------0--
SENT295319:0:Tno------0--
SENT321314:2:Tno------0--
SENT454169:2:Tno------0--
SFLE198214:0:Tyes---0--3191--
SFLE373384:0:Tno---0--3126--
SFUM335543:0:Tyes---01635313523--
SGLO343509:3:Tyes------0--
SHAL458817:0:Tyes2346789100
SHIGELLA:0:Tno---0--3776--
SLOI323850:0:Tyes2346789100
SMUT210007:0:Tyes---0-----
SONE211586:1:Tyes8764321010
SPEA398579:0:Tno8764321010
SPNE1313:0:Tyes---0-----
SPRO399741:1:Tyes0124567--
SPYO160490:0:Tno---0-----
SPYO186103:0:Tno---0-----
SPYO198466:0:Tno---0-----
SPYO286636:0:Tno---0-----
SPYO293653:0:Tno---0-----
SPYO319701:0:Tyes---0-----
SPYO370551:0:Tno---0-----
SPYO370552:0:Tno---0-----
SPYO370553:0:Tno---0-----
SPYO370554:0:Tyes---0-----
SSED425104:0:Tyes2346789100
SSON300269:1:Tyes---0-----
SSP1148:0:Tyes---0-1171---
SSP321327:0:Tyes----9219190--
SSP321332:0:Tyes---0843845---
SSP387093:0:Tyes---0-76--
SSP64471:0:Tyes---0-----
SSP94122:1:Tyes8764321010
STYP99287:1:Tyes------0--
SWOL335541:0:Tyes----20---
TCRU317025:0:Tyes87-43210-
TDEN292415:0:Tyes---11105625610--
TDEN326298:0:Tyes-----0---
TELO197221:0:Tyes---905-0---
TERY203124:0:Tyes-----0---
TLET416591:0:Tyes----0563---
TMAR243274:0:Tyes-----0---
TPET390874:0:Tno-----0765--
TPSE340099:0:Tyes---320---
TSP1755:0:Tyes---320---
TSP28240:0:Tyes-----0---
TTEN273068:0:Tyes---320---
TTHE262724:1:Tyes---41901201579--
TTHE300852:2:Tyes----44301040--
TTUR377629:0:Tyes8--43210-
VCHO:0:Tyes95969799100101010293
VCHO345073:1:Tno2346789100
VEIS391735:1:Tyes---281393002821--
VFIS312309:2:Tyes2346789100
VPAR223926:1:Tyes87-4321010
VVUL196600:2:Tyes8764321010
VVUL216895:1:Tno2346789100
WSUC273121:0:Tyes-----0---
XAUT78245:1:Tyes---3210--
XAXO190486:0:Tyes76-3210--
XCAM190485:0:Tyes01-4567--
XCAM314565:0:Tno76-3210--
XCAM316273:0:Tno01-4567--
XCAM487884:0:Tno76-3210--
XFAS160492:2:Tno---21017010--
XFAS183190:1:Tyes---21170010--
XFAS405440:0:Tno---21144010--
XORY291331:0:Tno---21010--
XORY342109:0:Tyes---21010--
XORY360094:0:Tno---1618220--
YENT393305:1:Tyes22021902162152144--
YPES187410:5:Tno---0123--
YPES214092:3:Tno---0250512--
YPES349746:2:Tno---0123--
YPES360102:3:Tyes---3210--
YPES377628:2:Tno---0123--
YPES386656:2:Tno---3210--
YPSE273123:2:Tno---0123--
YPSE349747:2:Tno---3210--



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