CANDIDATE ID: 169

CANDIDATE ID: 169

NUMBER OF GENES: 9
AVERAGE SCORE:    9.9929694e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    6.6666667e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7910 (yjhG) (b4297)
   Products of gene:
     - G7910-MONOMER (KpLE2 phage-like element; predicted dehydratase)

- G6141 (yagF) (b0269)
   Products of gene:
     - G6141-MONOMER (CP4-6 prophage; predicted dehydratase)

- EG11583 (gcl) (b0507)
   Products of gene:
     - GLYOCARBOLIG-MONOMER (Gcl)
     - GLYOCARBOLIG-CPLX (glyoxylate carboligase)
       Reactions:
        2 glyoxylate + H+  ->  CO2 + tartronate semialdehyde
         In pathways
         GLYCOL-GLYOXDEG-PWY (superpathway of glycol metabolism and degradation)
         GLYCOLATEMET-PWY (glycolate and glyoxylate degradation I)

- EG11577 (leuB) (b0073)
   Products of gene:
     - 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
     - 3-ISOPROPYLMALDEHYDROG-CPLX (3-isopropylmalate dehydrogenase)
       Reactions:
        (2R,3S)-3-isopropylmalate + NAD+  =  (2S)-2-isopropyl-3-oxosuccinate + NADH + H+
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)

- EG11226 (leuA) (b0074)
   Products of gene:
     - 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
       Reactions:
        2-oxoisovalerate + acetyl-CoA + H2O  ->  (2S)-2-isopropylmalate + coenzyme A + H+
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)

- EG10500 (ilvI) (b0077)
   Products of gene:
     - ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
     - ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase)
       Reactions:
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)

- EG10499 (ilvH) (brnP)
   Products of gene:
     - ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
     - ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase)
       Reactions:
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)

- EG10496 (ilvD) (b3771)
   Products of gene:
     - DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
     - DIHYDROXYACIDDEHYDRAT-CPLX (dihydroxy acid dehydratase)
       Reactions:
        2,3-dihydroxy-isovalerate  ->  2-oxoisovalerate + H2O
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         VALSYN-PWY (valine biosynthesis)
        2,3-dihydroxy-3-methylvalerate  ->  2-keto-3-methyl-valerate + H2O
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)

- EG10494 (ilvB) (b3671)
   Products of gene:
     - LARGEILVB-MONOMER (IlvB)
     - ACETOLACTSYNI-CPLX (acetohydroxybutanoate synthase / acetolactate synthase)
       Reactions:
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)



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ORGANISMS CONTAINING AT LEAST 8 GENES FROM THE GROUP:

Total number of orgs: 182
Effective number of orgs (counting one per cluster within 468 clusters): 159

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM48
XAUT78245 ncbi Xanthobacter autotrophicus Py29
WSUC273121 ncbi Wolinella succinogenes DSM 17409
VVUL196600 ncbi Vibrio vulnificus YJ0169
UMET351160 ncbi uncultured methanogenic archaeon RC-I8
TTHE300852 ncbi Thermus thermophilus HB88
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB48
TSP1755 Thermoanaerobacter sp.9
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332238
TERY203124 ncbi Trichodesmium erythraeum IMS1019
TELO197221 ncbi Thermosynechococcus elongatus BP-19
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen9
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT29
STHE322159 ncbi Streptococcus thermophilus LMD-98
STHE299768 ncbi Streptococcus thermophilus CNRZ10668
STHE292459 ncbi Symbiobacterium thermophilum IAM 148639
STHE264199 ncbi Streptococcus thermophilus LMG 183118
SSUI391296 ncbi Streptococcus suis 98HAH338
SSP94122 ncbi Shewanella sp. ANA-38
SSP84588 ncbi Synechococcus sp. WH 81028
SSP64471 ncbi Synechococcus sp. CC93119
SSP644076 Silicibacter sp. TrichCH4B8
SSP387093 ncbi Sulfurovum sp. NBC37-19
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)9
SSP321327 ncbi Synechococcus sp. JA-3-3Ab9
SSP292414 ncbi Ruegeria sp. TM10408
SSP1148 ncbi Synechocystis sp. PCC 68039
SSP1131 Synechococcus sp. CC96058
SPRO399741 ncbi Serratia proteamaculans 5689
SPEA398579 ncbi Shewanella pealeana ATCC 7003458
SONE211586 ncbi Shewanella oneidensis MR-18
SMUT210007 ncbi Streptococcus mutans UA1598
SMEL266834 ncbi Sinorhizobium meliloti 10218
SMED366394 ncbi Sinorhizobium medicae WSM4198
SLOI323850 ncbi Shewanella loihica PV-48
SLAC55218 Ruegeria lacuscaerulensis8
SHAL458817 ncbi Shewanella halifaxensis HAW-EB49
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB9
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4769
SBAL402882 ncbi Shewanella baltica OS1859
SBAL399599 ncbi Shewanella baltica OS1959
SACI56780 ncbi Syntrophus aciditrophicus SB8
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170298
RPOM246200 ncbi Ruegeria pomeroyi DSS-38
RPAL316058 ncbi Rhodopseudomonas palustris HaA28
RPAL316057 ncbi Rhodopseudomonas palustris BisB59
RPAL316056 ncbi Rhodopseudomonas palustris BisB189
RPAL316055 ncbi Rhodopseudomonas palustris BisA538
RPAL258594 ncbi Rhodopseudomonas palustris CGA0099
RMET266264 ncbi Ralstonia metallidurans CH348
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38418
REUT381666 ncbi Ralstonia eutropha H168
REUT264198 ncbi Ralstonia eutropha JMP1348
RETL347834 ncbi Rhizobium etli CFN 428
PTHE370438 ncbi Pelotomaculum thermopropionicum SI9
PSTU379731 ncbi Pseudomonas stutzeri A15018
PSP296591 ncbi Polaromonas sp. JS6668
PMOB403833 ncbi Petrotoga mobilis SJ959
PMAR93060 ncbi Prochlorococcus marinus MIT 92158
PMAR74547 ncbi Prochlorococcus marinus MIT 93138
PMAR74546 ncbi Prochlorococcus marinus MIT 93128
PMAR59920 ncbi Prochlorococcus marinus NATL2A9
PMAR167555 ncbi Prochlorococcus marinus NATL1A9
PMAR167546 ncbi Prochlorococcus marinus MIT 93018
PMAR167542 ncbi Prochlorococcus marinus MIT 95158
PMAR167540 Prochlorococcus marinus pastoris MED4ax8
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13759
PMAR146891 ncbi Prochlorococcus marinus AS96018
PLUT319225 ncbi Chlorobium luteolum DSM 2738
PING357804 ncbi Psychromonas ingrahamii 379
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1258
PFLU205922 ncbi Pseudomonas fluorescens Pf0-18
PCAR338963 ncbi Pelobacter carbinolicus DSM 23809
OIHE221109 ncbi Oceanobacillus iheyensis HTE8319
OCAR504832 ncbi Oligotropha carboxidovorans OM59
NSP387092 ncbi Nitratiruptor sp. SB155-29
NSP103690 ncbi Nostoc sp. PCC 71209
NEUT335283 ncbi Nitrosomonas eutropha C918
NEUR228410 ncbi Nitrosomonas europaea ATCC 197188
MTHE349307 ncbi Methanosaeta thermophila PT8
MTHE264732 ncbi Moorella thermoacetica ATCC 390739
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H8
MSP266779 ncbi Chelativorans sp. BNC18
MMAZ192952 ncbi Methanosarcina mazei Go18
MMAR444158 ncbi Methanococcus maripaludis C68
MMAR402880 ncbi Methanococcus maripaludis C58
MMAR368407 ncbi Methanoculleus marisnigri JR18
MMAR267377 ncbi Methanococcus maripaludis S28
MLOT266835 ncbi Mesorhizobium loti MAFF3030998
MLAB410358 ncbi Methanocorpusculum labreanum Z8
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26618
MHUN323259 ncbi Methanospirillum hungatei JF-18
MEXT419610 ncbi Methylobacterium extorquens PA18
MCAP243233 ncbi Methylococcus capsulatus Bath9
MBUR259564 ncbi Methanococcoides burtonii DSM 62428
MAQU351348 ncbi Marinobacter aquaeolei VT89
MAER449447 ncbi Microcystis aeruginosa NIES-8439
MAEO419665 ncbi Methanococcus aeolicus Nankai-38
MACE188937 ncbi Methanosarcina acetivorans C2A8
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53348
LSPH444177 ncbi Lysinibacillus sphaericus C3-419
LMON265669 ncbi Listeria monocytogenes 4b F23658
LMON169963 ncbi Listeria monocytogenes EGD-e8
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1308
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566018
LINN272626 ncbi Listeria innocua Clip112628
LCHO395495 ncbi Leptothrix cholodnii SP-68
HMOD498761 ncbi Heliobacterium modesticaldum Ice19
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237799
HARS204773 ncbi Herminiimonas arsenicoxydans8
GVIO251221 ncbi Gloeobacter violaceus PCC 74218
GURA351605 ncbi Geobacter uraniireducens Rf49
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-29
GSUL243231 ncbi Geobacter sulfurreducens PCA9
GMET269799 ncbi Geobacter metallireducens GS-159
GKAU235909 ncbi Geobacillus kaustophilus HTA4269
ESP42895 Enterobacter sp.9
ECOL585056 ncbi Escherichia coli UMN0269
ECOL585035 ncbi Escherichia coli S889
ECOL316407 ncbi Escherichia coli K-12 substr. W31109
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough8
DSP255470 ncbi Dehalococcoides sp. CBDB19
DSP216389 ncbi Dehalococcoides sp. BAV19
DRED349161 ncbi Desulfotomaculum reducens MI-19
DOLE96561 ncbi Desulfococcus oleovorans Hxd38
DHAF138119 ncbi Desulfitobacterium hafniense Y518
DETH243164 ncbi Dehalococcoides ethenogenes 1959
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G209
CTEP194439 ncbi Chlorobium tepidum TLS8
CSP501479 Citreicella sp. SE459
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)8
CPSY167879 ncbi Colwellia psychrerythraea 34H8
CPHY357809 ncbi Clostridium phytofermentans ISDg8
CMET456442 ncbi Candidatus Methanoregula boonei 6A88
CKLU431943 ncbi Clostridium kluyveri DSM 5558
CJEJ407148 ncbi Campylobacter jejuni jejuni 811168
CJEJ360109 ncbi Campylobacter jejuni doylei 269.978
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1768
CJEJ195099 ncbi Campylobacter jejuni RM12218
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111688
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29019
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3819
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C9
CCUR360105 ncbi Campylobacter curvus 525.928
CCHL340177 ncbi Chlorobium chlorochromatii CaD38
BWEI315730 ncbi Bacillus weihenstephanensis KBAB49
BVIE269482 ncbi Burkholderia vietnamiensis G48
BTHU412694 ncbi Bacillus thuringiensis Al Hakam9
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-279
BSUB ncbi Bacillus subtilis subtilis 1689
BSP376 Bradyrhizobium sp.9
BSP36773 Burkholderia sp.8
BPUM315750 ncbi Bacillus pumilus SAFR-0329
BLIC279010 ncbi Bacillus licheniformis ATCC 145809
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1109
BCLA66692 ncbi Bacillus clausii KSM-K169
BCER572264 ncbi Bacillus cereus 03BB1029
BCER405917 Bacillus cereus W9
BCER315749 ncbi Bacillus cytotoxicus NVH 391-989
BCER288681 ncbi Bacillus cereus E33L9
BCER226900 ncbi Bacillus cereus ATCC 145799
BCEN331272 ncbi Burkholderia cenocepacia HI24248
BCEN331271 ncbi Burkholderia cenocepacia AU 10548
BANT592021 ncbi Bacillus anthracis A02489
BANT568206 ncbi Bacillus anthracis CDC 6849
BANT261594 ncbi Bacillus anthracis Ames Ancestor9
BANT260799 ncbi Bacillus anthracis Sterne9
BAMY326423 ncbi Bacillus amyloliquefaciens FZB429
BAMB398577 ncbi Burkholderia ambifaria MC40-68
BAMB339670 ncbi Burkholderia ambifaria AMMD8
AVAR240292 ncbi Anabaena variabilis ATCC 294139
ASP76114 ncbi Aromatoleum aromaticum EbN18
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4498
AMET293826 ncbi Alkaliphilus metalliredigens QYMF8
AMAR329726 ncbi Acaryochloris marina MBIC110178
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43049
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232708
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C9
ACAU438753 ncbi Azorhizobium caulinodans ORS 5718
ABUT367737 ncbi Arcobacter butzleri RM40188
ABOR393595 ncbi Alcanivorax borkumensis SK28
AAEO224324 ncbi Aquifex aeolicus VF59


Names of the homologs of the genes in the group in each of these orgs
  G7910   G6141   EG11583   EG11577   EG11226   EG10500   EG10499   EG10496   EG10494   
ZMOB264203 ZMO0368ZMO0368ZMO0677ZMO1835ZMO1139ZMO1140ZMO1792ZMO1139
XAUT78245 XAUT_1022XAUT_1022XAUT_2367XAUT_2589XAUT_1329XAUT_1488XAUT_1489XAUT_0070XAUT_1488
WSUC273121 WS0130WS0130WS0103WS1813WS0624WS0103WS0102WS0130WS0103
VVUL196600 VVA1581VVA1581VV0495VV0486VV0487VV0495VV0496VV3243VV3240
UMET351160 RCIX238RCIX238LRC534RCIX673LRC534LRC533RCIX1841LRC534
TTHE300852 TTHA1234TTHA1234TTHA1213TTHA1230TTHA1210TTHA1213TTHA1212TTHA1213
TTEN273068 TTE0020TTE0020TTE0021TTE0019TTE0016TTE0014TTE0020TTE0021
TSP1755 TETH514_0018TETH514_0018TETH514_0019TETH514_0017TETH514_0014TETH514_0019TETH514_0012TETH514_0018TETH514_0019
TPSE340099 TETH39_0019TETH39_0019TETH39_0020TETH39_0018TETH39_0015TETH39_0013TETH39_0019TETH39_0020
TERY203124 TERY_0019TERY_0019TERY_2843TERY_4403TERY_2253TERY_2843TERY_1850TERY_0019TERY_2843
TELO197221 TLL1057TLL1057TLR1296TLR1600TLL1397TLR1296TLL0880TLL1057TLR1296
SWOL335541 SWOL_2147SWOL_2147SWOL_2146SWOL_2140SWOL_2143SWOL_2146SWOL_2145SWOL_2147SWOL_2146
STYP99287 STM3531STM3531STM0517STM0112STM0113STM0116STM0117STM3904STM3901
STHE322159 STER_1566STER_1851STER_1850STER_1170STER_1171STER_1850STER_1849STER_1851
STHE299768 STR1604STR1874STR1873STR1202STR1203STR1873STR1872STR1874
STHE292459 STH2685STH2685STH2684STH3035STH2687STH2684STH2689STH2685STH2684
STHE264199 STU1604STU1874STU1873STU1202STU1203STU1873STU1872STU1874
SSUI391296 SSU98_1894SSU98_1894SSU98_1891SSU98_1953SSU98_1954SSU98_1891SSU98_1890SSU98_1891
SSP94122 SHEWANA3_0358SHEWANA3_2269SHEWANA3_3760SHEWANA3_3761SHEWANA3_2269SHEWANA3_2270SHEWANA3_0358SHEWANA3_0356
SSP84588 SYNW1123OR3467SYNW1123OR3467SYNW0784OR1664SYNW0730OR1620SYNW1746OR2980SYNW0680OR1970SYNW1123OR3467SYNW1746OR2980
SSP64471 GSYN1809GSYN1809GSYN2129GSYN1830GSYN1052GSYN2129GSYN0962GSYN1809GSYN2129
SSP644076 SCH4B_3691SCH4B_3691SCH4B_3679SCH4B_1384SCH4B_4254SCH4B_4253SCH4B_2654SCH4B_4254
SSP387093 SUN_2427SUN_2427SUN_1823SUN_1705SUN_1956SUN_1823SUN_1822SUN_2427SUN_1823
SSP321332 CYB_1987CYB_1987CYB_0648CYB_1631CYB_1442CYB_0648CYB_0971CYB_1987CYB_0648
SSP321327 CYA_1697CYA_1697CYA_2073CYA_1798CYA_2223CYA_2073CYA_2130CYA_1697CYA_2073
SSP292414 TM1040_2486TM1040_0376TM1040_3762TM1040_2282TM1040_0875TM1040_0874TM1040_2486TM1040_0875
SSP1148 SLR0452SLR0452SLR2088SLR1517SLR0186SLR2088SLL0065SLR0452SLR2088
SSP1131 SYNCC9605_1260SYNCC9605_1260SYNCC9605_0717SYNCC9605_1865SYNCC9605_1939SYNCC9605_1989SYNCC9605_1260SYNCC9605_0717
SPRO399741 SPRO_0708SPRO_0708SPRO_0748SPRO_0744SPRO_0745SPRO_0748SPRO_0749SPRO_4757SPRO_0734
SPEA398579 SPEA_0348SPEA_1911SPEA_3827SPEA_3828SPEA_1911SPEA_1910SPEA_0348SPEA_0345
SONE211586 SO_4345SO_2279SO_4235SO_4236SO_2279SO_2278SO_4345SO_4347
SMUT210007 SMU_2128SMU_2128SMU_231SMU_1383SMU_1384SMU_231SMU_232SMU_231
SMEL266834 SMB20890SMB20890SMB20681SMC04405SMC01431SMC01430SMC04045SMC01431
SMED366394 SMED_4478SMED_4478SMED_4308SMED_3178SMED_2008SMED_2007SMED_2723SMED_2008
SLOI323850 SHEW_0292SHEW_1776SHEW_3471SHEW_3472SHEW_1776SHEW_1775SHEW_0292SHEW_0289
SLAC55218 SL1157_0897SL1157_0138SL1157_0889SL1157_0568SL1157_2554SL1157_2553SL1157_0897SL1157_2554
SHAL458817 SHAL_3941SHAL_3941SHAL_2387SHAL_0439SHAL_0438SHAL_2387SHAL_2388SHAL_3941SHAL_3944
SFUM335543 SFUM_0356SFUM_0356SFUM_3024SFUM_3031SFUM_0306SFUM_3024SFUM_3025SFUM_0356SFUM_3023
SENT454169 SEHA_C3840SEHA_C3840SEHA_C0625SEHA_C0123SEHA_C0124SEHA_C0127SEHA_C0128SEHA_C4235SEHA_C4232
SBAL402882 SHEW185_4007SHEW185_4007SHEW185_2374SHEW185_0386SHEW185_0385SHEW185_2374SHEW185_2375SHEW185_4007SHEW185_4009
SBAL399599 SBAL195_4126SBAL195_4126SBAL195_2490SBAL195_0398SBAL195_0397SBAL195_2490SBAL195_2491SBAL195_4126SBAL195_4128
SACI56780 SYN_01708SYN_01708SYN_01711SYN_00088SYN_00090SYN_01711SYN_01708SYN_01711
RSPH349101 RSPH17029_1303RSPH17029_1294RSPH17029_2518RSPH17029_1005RSPH17029_1294RSPH17029_1293RSPH17029_3801RSPH17029_1294
RPOM246200 SPO_3314SPO_3032SPO_0210SPO_0422SPO_2578SPO_2579SPO_3314SPO_2578
RPAL316058 RPB_3247RPB_3345RPB_0335RPB_3330RPB_3345RPB_3344RPB_4066RPB_3345
RPAL316057 RPD_2806RPD_2806RPD_2098RPD_0490RPD_2112RPD_2098RPD_2100RPD_3804RPD_2098
RPAL316056 RPC_4380RPC_4380RPC_3255RPC_0240RPC_3235RPC_3255RPC_3253RPC_4321RPC_3255
RPAL316055 RPE_2261RPE_2187RPE_0480RPE_2209RPE_2187RPE_2189RPE_4363RPE_2187
RPAL258594 RPA2155RPA2155RPA2031RPA0227RPA2046RPA2031RPA2032RPA1463RPA2031
RMET266264 RMET_2804RMET_4585RMET_3448RMET_2472RMET_0918RMET_0911RMET_0912RMET_4585
RLEG216596 RL3612RL3612RL3245RL4707RL3245RL3244RL1803RL3245
REUT381666 H16_A2987H16_A2987H16_A3598H16_A2619H16_A1041H16_A1035H16_A1036H16_B0280
REUT264198 REUT_A0639REUT_A0639REUT_A3291REUT_A2311REUT_A0953REUT_A0947REUT_A0948REUT_A2432
RETL347834 RHE_CH03160RHE_CH03160RHE_CH02790RHE_CH04093RHE_CH02790RHE_CH02789RHE_CH01704RHE_CH02790
PTHE370438 PTH_0526PTH_0526PTH_0530PTH_0534PTH_0531PTH_0527PTH_0528PTH_0526PTH_0527
PSTU379731 PST_2444PST_2444PST_3114PST_1774PST_3240PST_3258PST_3257PST_4012
PSP296591 BPRO_2052BPRO_2052BPRO_4561BPRO_3610BPRO_2322BPRO_2317BPRO_2318BPRO_2052
PMOB403833 PMOB_1593PMOB_1593PMOB_1592PMOB_1586PMOB_1589PMOB_1592PMOB_1591PMOB_1593PMOB_1592
PMAR93060 P9215_08681P9215_08681P9215_08811P9215_12011P9215_06071P9215_13601P9215_08681P9215_06071
PMAR74547 PMT0560PMT0560PMT1239PMT0531PMT1121PMT1239PMT1176PMT1239
PMAR74546 PMT9312_0782PMT9312_0782PMT9312_0794PMT9312_1077PMT9312_0526PMT9312_1253PMT9312_0782PMT9312_0526
PMAR59920 PMN2A_0180PMN2A_0180PMN2A_1858PMN2A_0194PMN2A_0686PMN2A_1858PMN2A_0764PMN2A_0180PMN2A_1858
PMAR167555 NATL1_08121NATL1_08121NATL1_05831NATL1_08261NATL1_15201NATL1_05831NATL1_16041NATL1_08121NATL1_05831
PMAR167546 P9301ORF_0850P9301ORF_0850P9301ORF_0863P9301ORF_1193P9301ORF_0565P9301ORF_1367P9301ORF_0850P9301ORF_0565
PMAR167542 P9515ORF_0850P9515ORF_0850P9515ORF_0836P9515ORF_1208P9515ORF_0626P9515ORF_1381P9515ORF_0850P9515ORF_0626
PMAR167540 PMM0774PMM0774PMM0786PMM1066PMM0526PMM1154PMM0774PMM0526
PMAR167539 PRO_0847PRO_0847PRO_0526PRO_0862PRO_1134PRO_0526PRO_1251PRO_0847PRO_0526
PMAR146891 A9601_08361A9601_08361A9601_08501A9601_11711A9601_05821A9601_13311A9601_08361A9601_05821
PLUT319225 PLUT_0609PLUT_0609PLUT_0603PLUT_0602PLUT_0608PLUT_0605PLUT_0609PLUT_0608
PING357804 PING_2151PING_2151PING_3430PING_2229PING_0216PING_3430PING_3431PING_0346PING_0348
PHAL326442 PSHAB0129PSHAB0129PSHAA2893PSHAA2894PSHAB0464PSHAB0463PSHAA2769PSHAA2771
PFLU205922 PFL_3227PFL_3227PFL_1598PFL_1892PFL_4788PFL_4787PFL_5358PFL_4788
PCAR338963 PCAR_1911PCAR_1911PCAR_1910PCAR_1904PCAR_1907PCAR_1910PCAR_1909PCAR_1911PCAR_1910
OIHE221109 OB2624OB2624OB2623OB2619OB2620OB2623OB2622OB2624OB2623
OCAR504832 OCAR_6278OCAR_6278OCAR_6562OCAR_4283OCAR_5296OCAR_5290OCAR_5291OCAR_4462OCAR_5290
NSP387092 NIS_0126NIS_0126NIS_0810NIS_0727NIS_1407NIS_0810NIS_0811NIS_0126NIS_0810
NSP103690 ALR2771ALR2771ALL4613ALR1313ALR4840ALL4613ALR4627ALR2771ALL4613
NEUT335283 NEUT_2238NEUT_2238NEUT_1262NEUT_1147NEUT_1244NEUT_1262NEUT_1261NEUT_2238
NEUR228410 NE0104NE0104NE1325NE0688NE1320NE1325NE1324NE0104
MTHE349307 MTHE_0673MTHE_0673MTHE_0110MTHE_1298MTHE_0110MTHE_0111MTHE_0673MTHE_0110
MTHE264732 MOTH_2259MOTH_2259MOTH_2258MOTH_2252MOTH_2255MOTH_2258MOTH_2257MOTH_2259MOTH_2258
MTHE187420 MTH1449MTH1449MTH1444MTH184MTH1481MTH1444MTH1443MTH1444
MSP266779 MESO_1688MESO_1688MESO_1488MESO_3381MESO_1488MESO_1489MESO_2666MESO_1488
MMAZ192952 MM0259MM0259MM0670MM1284MM0670MM0669MM0259MM0670
MMAR444158 MMARC6_0633MMARC6_0633MMARC6_0239MMARC6_1596MMARC6_0239MMARC6_0238MMARC6_0633MMARC6_0239
MMAR402880 MMARC5_1356MMARC5_1356MMARC5_0954MMARC5_0531MMARC5_0954MMARC5_0953MMARC5_1356MMARC5_0954
MMAR368407 MEMAR_0985MEMAR_0985MEMAR_1070MEMAR_1069MEMAR_1070MEMAR_1071MEMAR_0985MEMAR_1070
MMAR267377 MMP0318MMP0318MMP0650MMP1063MMP0650MMP0651MMP0318MMP0650
MLOT266835 MLL1102MLL1102MLR0251MLL4399MLL1433MLL1432MLR5361MLL1433
MLAB410358 MLAB_0613MLAB_0613MLAB_0605MLAB_0603MLAB_0605MLAB_0606MLAB_0613MLAB_0605
MJAN243232 MJ_1276MJ_1276MJ_0277MJ_1195MJ_0277MJ_0161MJ_1276MJ_0277
MHUN323259 MHUN_0139MHUN_0139MHUN_1242MHUN_1243MHUN_1242MHUN_1241MHUN_0139MHUN_1242
MEXT419610 MEXT_1954MEXT_1954MEXT_2524MEXT_2674MEXT_4864MEXT_4866MEXT_2675MEXT_4864
MCAP243233 MCA_2082MCA_2082MCA_2270MCA_2063MCA_2275MCA_2270MCA_2271MCA_2082MCA_2270
MBUR259564 MBUR_2246MBUR_2246MBUR_0710MBUR_0711MBUR_0710MBUR_0709MBUR_2246MBUR_0710
MAQU351348 MAQU_2116MAQU_2116MAQU_0882MAQU_1563MAQU_2477MAQU_0882MAQU_0883MAQU_2423MAQU_2114
MAER449447 MAE_28670MAE_28670MAE_50700MAE_00210MAE_54460MAE_50700MAE_48120MAE_28670MAE_50700
MAEO419665 MAEO_0680MAEO_0680MAEO_0682MAEO_0849MAEO_0682MAEO_0683MAEO_0680MAEO_0682
MACE188937 MA1802MA3373MA3792MA4615MA3792MA3791MA1802MA3792
LWEL386043 LWE2002LWE2002LWE2007LWE2006LWE2003LWE2004LWE2002LWE2003
LSPH444177 BSPH_3390BSPH_3390BSPH_3389BSPH_3385BSPH_3386BSPH_3389BSPH_3388BSPH_3390BSPH_3389
LMON265669 LMOF2365_2006LMOF2365_2006LMOF2365_2011LMOF2365_2010LMOF2365_2007LMOF2365_2008LMOF2365_2006LMOF2365_2007
LMON169963 LMO1983LMO1983LMO1988LMO1987LMO1984LMO1985LMO1983LMO1984
LINT267671 LIC_11101LIC_11101LIC_11768LIC_11726LIC_11409LIC_11410LIC_11101LIC_12764
LINT189518 LA2958LA2958LA2152LA2202LA2570LA2569LA2958LA2570
LINN272626 LIN2090LIN2090LIN2095LIN2094LIN2091LIN2092LIN2090LIN2091
LCHO395495 LCHO_1490LCHO_1490LCHO_1135LCHO_1677LCHO_2888LCHO_2893LCHO_2892LCHO_2893
HMOD498761 HM1_1511HM1_1511HM1_1979HM1_1518HM1_1515HM1_1979HM1_1512HM1_1511HM1_1514
HAUR316274 HAUR_4450HAUR_4450HAUR_4449HAUR_4439HAUR_4446HAUR_4449HAUR_4448HAUR_4450HAUR_4449
HARS204773 HEAR0734HEAR0734HEAR0332HEAR1217HEAR1242HEAR1237HEAR1238HEAR0734
GVIO251221 GLL3168GLL3168GLR3279GLL3551GLL2290GLR3279GLL1136GLR3279
GURA351605 GURA_3721GURA_3721GURA_3720GURA_1045GURA_3715GURA_3720GURA_3719GURA_3721GURA_3720
GTHE420246 GTNG_1931GTNG_1931GTNG_2590GTNG_2586GTNG_2587GTNG_2590GTNG_2589GTNG_1931GTNG_2590
GSUL243231 GSU_1912GSU_1912GSU_1911GSU_2879GSU_1906GSU_1911GSU_1910GSU_1912GSU_1911
GMET269799 GMET_1259GMET_1259GMET_1260GMET_0602GMET_1265GMET_1260GMET_1261GMET_1259GMET_1260
GKAU235909 GK2046GK2046GK2661GK2657GK2658GK2661GK2660GK2046GK2661
ESP42895 ENT638_0455ENT638_0455ENT638_0624ENT638_0621ENT638_0622ENT638_0624ENT638_0625ENT638_4012ENT638_0025
ECOL585056 ECUMN_4896ECUMN_4896ECUMN_0548ECUMN_0075ECUMN_0076ECUMN_0078ECUMN_0079ECUMN_4297ECUMN_4294
ECOL585035 ECS88_4908ECS88_4908ECS88_0506ECS88_0078ECS88_0079ECS88_0081ECS88_0082ECS88_4194ECS88_4191
ECOL316407 ECK0270:JW0262:B0269ECK0270:JW0262:B0269ECK0500:JW0495:B0507ECK0075:JW5807:B0073ECK0076:JW0073:B0074ECK0079:JW0076:B0077ECK0080:JW0077:B0078ECK3763:JW5605:B3771ECK3662:JW3646:B3671
DVUL882 DVU_3373DVU_1376DVU_2985DVU_2981DVU_1376DVU_1377DVU_3373DVU_0360
DSP255470 CBDBA815CBDBA815CBDBA813CBDBA804CBDBA808CBDBA813CBDBA812CBDBA815CBDBA813
DSP216389 DEHABAV1_0753DEHABAV1_0753DEHABAV1_0752DEHABAV1_0745DEHABAV1_0749DEHABAV1_0752DEHABAV1_0751DEHABAV1_0753DEHABAV1_0752
DRED349161 DRED_0280DRED_0280DRED_0281DRED_0288DRED_0285DRED_0281DRED_0282DRED_0280DRED_0284
DOLE96561 DOLE_2036DOLE_2036DOLE_2037DOLE_2219DOLE_2041DOLE_2037DOLE_2038DOLE_2036
DHAF138119 DSY3452DSY1365DSY4166DSY1371DSY1366DSY1367DSY1365DSY1366
DETH243164 DET_0834DET_0834DET_0833DET_0826DET_0830DET_0833DET_0832DET_0834DET_0833
DDES207559 DDE_0116DDE_0116DDE_2168DDE_3222DDE_3218DDE_2168DDE_2167DDE_0116DDE_0398
CTEP194439 CT_0619CT_0619CT_0618CT_0615CT_0618CT_0617CT_0619CT_0618
CSP501479 CSE45_2357CSE45_3700CSE45_2368CSE45_0315CSE45_3330CSE45_2368CSE45_2369CSE45_3719CSE45_2368
CRUT413404 RMAG_0529RMAG_0529RMAG_0445RMAG_0099RMAG_0449RMAG_0445RMAG_0446RMAG_0445
CPSY167879 CPS_2080CPS_2080CPS_4209CPS_4208CPS_3236CPS_3237CPS_4846CPS_4843
CPHY357809 CPHY_3830CPHY_3830CPHY_3358CPHY_3171CPHY_3347CPHY_3021CPHY_3348CPHY_3347
CMET456442 MBOO_1203MBOO_1203MBOO_1443MBOO_1442MBOO_1443MBOO_1444MBOO_1203MBOO_1443
CKLU431943 CKL_1693CKL_1693CKL_2157CKL_2160CKL_1081CKL_1617CKL_1693CKL_1081
CJEJ407148 C8J_0012C8J_0012C8J_1624C8J_1625C8J_0536C8J_0537C8J_0012C8J_0536
CJEJ360109 JJD26997_0013JJD26997_0013JJD26997_2095JJD26997_2096JJD26997_1096JJD26997_1095JJD26997_0013JJD26997_1096
CJEJ354242 CJJ81176_0039CJJ81176_0039CJJ81176_0016CJJ81176_0017CJJ81176_0602CJJ81176_0603CJJ81176_0039CJJ81176_0602
CJEJ195099 CJE_0012CJE_0012CJE_1888CJE_1889CJE_0677CJE_0678CJE_0012CJE_0677
CJEJ192222 CJ0013CJ0013CJ1718CCJ1719CCJ0574CJ0575CJ0013CJ0574
CHYD246194 CHY_0516CHY_0516CHY_0517CHY_0524CHY_0521CHY_0517CHY_0518CHY_0516CHY_0517
CHOM360107 CHAB381_1769CHAB381_1769CHAB381_1165CHAB381_1264CHAB381_0491CHAB381_1165CHAB381_1166CHAB381_1769CHAB381_1165
CDES477974 DAUD_0540DAUD_0540DAUD_0352DAUD_1279DAUD_0355DAUD_0352DAUD_0353DAUD_0540DAUD_0352
CCUR360105 CCV52592_2036CCV52592_2036CCV52592_1365CCV52592_1193CCV52592_1428CCV52592_1429CCV52592_2036CCV52592_1428
CCHL340177 CAG_1906CAG_1906CAG_1905CAG_1901CAG_1905CAG_1903CAG_1906CAG_1905
BWEI315730 BCERKBAB4_1710BCERKBAB4_1710BCERKBAB4_1319BCERKBAB4_1323BCERKBAB4_1322BCERKBAB4_1707BCERKBAB4_1320BCERKBAB4_1710BCERKBAB4_1707
BVIE269482 BCEP1808_3832BCEP1808_3832BCEP1808_1802BCEP1808_4457BCEP1808_2344BCEP1808_2349BCEP1808_2348BCEP1808_4698
BTHU412694 BALH_1628BALH_1628BALH_1252BALH_1256BALH_1255BALH_1624BALH_1253BALH_1628BALH_1624
BTHU281309 BT9727_1694BT9727_1694BT9727_1691BT9727_1285BT9727_1284BT9727_1691BT9727_1282BT9727_1694BT9727_1691
BSUB BSU21870BSU21870BSU28310BSU28270BSU28280BSU28310BSU28300BSU21870BSU28310
BSP376 BRADO4080BRADO4080BRADO4946BRADO0353BRADO5528BRADO5564BRADO5562BRADO2754BRADO5564
BSP36773 BCEP18194_A5793BCEP18194_A5793BCEP18194_A5178BCEP18194_B2131BCEP18194_A5587BCEP18194_A5592BCEP18194_A5591BCEP18194_B1899
BPUM315750 BPUM_1922BPUM_1922BPUM_2472BPUM_2468BPUM_2469BPUM_2472BPUM_2471BPUM_1922BPUM_2472
BLIC279010 BL05225BL05225BL00608BL00612BL00611BL00608BL00609BL05225BL00608
BJAP224911 BLL4763BLL4763BLR3166BLL0504BLL6435BLL6503BLL6501BLL4536BLL6503
BCLA66692 ABC1110ABC1110ABC2645ABC2641ABC2642ABC2645ABC2644ABC2646ABC2645
BCER572264 BCA_1859BCA_1859BCA_1452BCA_1456BCA_1455BCA_1856BCA_1453BCA_1859BCA_1856
BCER405917 BCE_1937BCE_1937BCE_1517BCE_1521BCE_1520BCE_1934BCE_1518BCE_1937BCE_1934
BCER315749 BCER98_1446BCER98_1446BCER98_1120BCER98_1124BCER98_1123BCER98_1120BCER98_1121BCER98_1446BCER98_1120
BCER288681 BCE33L1669BCE33L1669BCE33L1282BCE33L1286BCE33L1285BCE33L1666BCE33L1283BCE33L1669BCE33L1666
BCER226900 BC_1780BC_1780BC_1777BC_1401BC_1400BC_1777BC_1398BC_1780BC_1777
BCEN331272 BCEN2424_2462BCEN2424_2462BCEN2424_1878BCEN2424_3952BCEN2424_2259BCEN2424_2265BCEN2424_2264BCEN2424_4135
BCEN331271 BCEN_1851BCEN_1851BCEN_6201BCEN_4415BCEN_1648BCEN_1654BCEN_1653BCEN_4231
BANT592021 BAA_1922BAA_1922BAA_1919BAA_1488BAA_1487BAA_1919BAA_1485BAA_1922BAA_1919
BANT568206 BAMEG_2739BAMEG_2739BAMEG_2742BAMEG_3174BAMEG_3175BAMEG_2742BAMEG_3177BAMEG_2739BAMEG_2742
BANT261594 GBAA1853GBAA1853GBAA1850GBAA1421GBAA1420GBAA1850GBAA1418GBAA1853GBAA1850
BANT260799 BAS1717BAS1717BAS1714BAS1312BAS1311BAS1714BAS1309BAS1717BAS1714
BAMY326423 RBAM_020010RBAM_020010RBAM_025370RBAM_025330RBAM_025340RBAM_025370RBAM_025360RBAM_020010RBAM_025370
BAMB398577 BAMMC406_2379BAMMC406_2379BAMMC406_1787BAMMC406_3847BAMMC406_2176BAMMC406_2181BAMMC406_2180BAMMC406_4027
BAMB339670 BAMB_2511BAMB_2511BAMB_1815BAMB_3343BAMB_2298BAMB_2303BAMB_2302BAMB_3546
AVAR240292 AVA_B0062AVA_0023AVA_2757AVA_2987AVA_2111AVA_2757AVA_2035AVA_0023AVA_2757
ASP76114 EBA478EBA478EBA4760EBA7154EBA7130EBA7132EBA1822EBA4751
ASAL382245 ASA_4109ASA_3404ASA_3410ASA_3409ASA_3404ASA_3403ASA_0122ASA_0119
AMET293826 AMET_1268AMET_0502AMET_3455AMET_3458AMET_3400AMET_3403AMET_3534AMET_3418
AMAR329726 AM1_3143AM1_3143AM1_3085AM1_0898AM1_0705AM1_3085AM1_2118AM1_3085
AFUL224325 AF_1014AF_1014AF_1720AF_0628AF_0219AF_1720AF_1719AF_1014AF_1720
AFER243159 AFE_1412AFE_1412AFE_1020AFE_0506AFE_2295AFE_2294AFE_2378AFE_2295
ADEH290397 ADEH_4111ADEH_4111ADEH_1978ADEH_2070ADEH_1981ADEH_1978ADEH_1977ADEH_4111ADEH_1978
ACAU438753 AZC_1408AZC_3488AZC_0304AZC_3545AZC_2376AZC_2375AZC_3530AZC_2376
ABUT367737 ABU_2100ABU_2100ABU_1013ABU_0456ABU_1156ABU_1157ABU_2100ABU_1156
ABOR393595 ABO_0180ABO_0180ABO_0481ABO_1467ABO_0638ABO_0481ABO_0482ABO_2312
AAEO224324 AQ_837AQ_837AQ_451AQ_244AQ_2090AQ_451AQ_1851AQ_837AQ_451


Organism features enriched in list (features available for 172 out of the 182 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000810220112
Disease:Anthrax 0.007390344
Disease:Food_poisoning 0.000014699
Endospores:No 0.000624846211
Endospores:Yes 0.00011022853
GC_Content_Range4:40-60 0.009442677224
GC_Content_Range7:0-30 7.592e-6247
Genome_Size_Range5:0-2 0.002495233155
Habitat:Aquatic 7.352e-74791
Habitat:Host-associated 1.171e-2114206
Habitat:Multiple 0.002425366178
Motility:No 0.001444731151
Motility:Yes 4.334e-6103267
Optimal_temp.:- 0.000042197257
Optimal_temp.:37 8.800e-712106
Oxygen_Req:Aerobic 0.000182237185
Oxygen_Req:Anaerobic 0.000016848102
Pathogenic_in:Animal 0.0008757966
Pathogenic_in:Human 9.620e-1130213
Pathogenic_in:No 3.355e-12104226
Salinity:Non-halophilic 0.002449820106
Shape:Coccus 0.00531561582
Shape:Irregular_coccus 0.00197081117
Shape:Oval 0.002144355
Shape:Sphere 0.0095602119
Temp._range:Thermophilic 0.00096011935



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 130
Effective number of orgs (counting one per cluster within 468 clusters): 95

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SMAR399550 ncbi Staphylothermus marinus F10
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PAST100379 Onion yellows phytoplasma0
PACN267747 ncbi Propionibacterium acnes KPA1712020
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
MXAN246197 ncbi Myxococcus xanthus DK 16220
MSYN262723 ncbi Mycoplasma synoviae 530
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MART243272 ncbi Mycoplasma arthritidis 158L3-10
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM0
ILOI283942 ncbi Idiomarina loihiensis L2TR0
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CMUR243161 ncbi Chlamydia muridarum Nigg0
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BQUI283165 ncbi Bartonella quintana Toulouse0
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ0
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0


Names of the homologs of the genes in the group in each of these orgs
  G7910   G6141   EG11583   EG11577   EG11226   EG10500   EG10499   EG10496   EG10494   
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
TVOL273116
TPEN368408
TPAL243276
TLET416591
TKOD69014
TDEN243275
TACI273075
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SMAR399550
SAGA211110
SAGA208435
SAGA205921
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PPEN278197
PINT246198
PHOR70601
PGIN242619
PAST100379
PACN267747
OTSU357244
NSEN222891
MXAN246197
MSYN262723
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MHYO295358
MHYO262722
MHYO262719
MGEN243273
MFLO265311
MCAP340047
MART243272
LSAK314315
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668
LJOH257314
LINT363253
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LACI272621
ILOI283942
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HDUC233412
HBUT415426
HACI382638
FTUL458234
FTUL393011
FTUL351581
FNUC190304
FNOD381764
FMAG334413
ERUM302409
ERUM254945
EFAE226185
ECHA205920
ECAN269484
DNOD246195
CTRA471473
CTRA471472
CTET212717
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380
CPER195103
CPER195102
CMUR243161
CFEL264202
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CABO218497
BTUR314724
BQUI283165
BHER314723
BGAR290434
BCIC186490
BBUR224326
BBAC360095
BBAC264462
BAFZ390236
AYEL322098
AURANTIMONAS
APHA212042
AORE350688
AMAR234826
ALAI441768


Organism features enriched in list (features available for 121 out of the 130 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.00001278112
Disease:Gas_gangrene 0.008764933
Disease:Legionnaire's_disease 0.001783244
Disease:None 0.0019614458
Disease:Pharyngitis 2.853e-688
Disease:Rocky_Mountain_Spotted_Fever 0.008764933
Disease:Wide_range_of_infections 2.119e-81111
Disease:bronchitis_and_pneumonitis 2.853e-688
GC_Content_Range4:0-40 5.259e-2088213
GC_Content_Range4:40-60 0.000173130224
GC_Content_Range4:60-100 1.788e-133145
GC_Content_Range7:0-30 6.519e-92747
GC_Content_Range7:30-40 4.489e-961166
GC_Content_Range7:50-60 1.884e-66107
GC_Content_Range7:60-70 4.215e-123134
Genome_Size_Range5:0-2 1.933e-3488155
Genome_Size_Range5:6-10 0.0001456147
Genome_Size_Range9:0-1 1.329e-71827
Genome_Size_Range9:1-2 2.123e-2370128
Habitat:Aquatic 3.211e-7391
Habitat:Host-associated 5.165e-1884206
Habitat:Multiple 0.000118721178
Habitat:Terrestrial 0.0051567131
Motility:Yes 1.599e-633267
Optimal_temp.:37 3.746e-742106
Oxygen_Req:Aerobic 0.006252028185
Pathogenic_in:Animal 0.00202632366
Pathogenic_in:Human 3.754e-768213
Pathogenic_in:No 1.283e-723226
Pathogenic_in:Ruminant 0.008764933
Salinity:Non-halophilic 0.000420935106
Shape:Rod 0.000674857347
Shape:Sphere 4.691e-81519



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 83
Effective number of orgs (counting one per cluster within 468 clusters): 77

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
AFUL224325 ncbi Archaeoglobus fulgidus DSM 4304 7.165e-74969
PMAR59920 ncbi Prochlorococcus marinus NATL2A 1.523e-65399
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP1375 1.741e-65479
PMAR167555 ncbi Prochlorococcus marinus NATL1A 1.829e-65509
DETH243164 ncbi Dehalococcoides ethenogenes 195 2.694e-65749
MAEO419665 ncbi Methanococcus aeolicus Nankai-3 2.911e-63448
DSP216389 ncbi Dehalococcoides sp. BAV1 3.200e-65859
DSP255470 ncbi Dehalococcoides sp. CBDB1 3.510e-65919
MLAB410358 ncbi Methanocorpusculum labreanum Z 4.478e-63638
CHOM360107 ncbi Campylobacter hominis ATCC BAA-381 4.888e-66139
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 2661 5.333e-63718
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H 6.880e-63838
MTHE349307 ncbi Methanosaeta thermophila PT 9.546e-63998
MMAR267377 ncbi Methanococcus maripaludis S2 0.00001194108
CMET456442 ncbi Candidatus Methanoregula boonei 6A8 0.00001214118
MMAR402880 ncbi Methanococcus maripaludis C5 0.00001364178
MMAR444158 ncbi Methanococcus maripaludis C6 0.00001474218
SSP64471 ncbi Synechococcus sp. CC9311 0.00001997169
MBUR259564 ncbi Methanococcoides burtonii DSM 6242 0.00003134638
MMAR368407 ncbi Methanoculleus marisnigri JR1 0.00004244818
PMAR167540 Prochlorococcus marinus pastoris MED4ax 0.00004314828
MKAN190192 ncbi Methanopyrus kandleri AV19 0.00004462907
MHUN323259 ncbi Methanospirillum hungatei JF-1 0.00004534858
PMAR167542 ncbi Prochlorococcus marinus MIT 9515 0.00004844898
PMAR146891 ncbi Prochlorococcus marinus AS9601 0.00004924908
PMAR167546 ncbi Prochlorococcus marinus MIT 9301 0.00005334958
PMOB403833 ncbi Petrotoga mobilis SJ95 0.00005508019
NSP387092 ncbi Nitratiruptor sp. SB155-2 0.00005698049
AAEO224324 ncbi Aquifex aeolicus VF5 0.00005898079
PMAR74546 ncbi Prochlorococcus marinus MIT 9312 0.00006255058
PMAR93060 ncbi Prochlorococcus marinus MIT 9215 0.00006985128
SSP387093 ncbi Sulfurovum sp. NBC37-1 0.00011628709
WSUC273121 ncbi Wolinella succinogenes DSM 1740 0.00011998739
TELO197221 ncbi Thermosynechococcus elongatus BP-1 0.00012118749
UMET351160 ncbi uncultured methanogenic archaeon RC-I 0.00015275658
MMAZ192952 ncbi Methanosarcina mazei Go1 0.00024606008
TERY203124 ncbi Trichodesmium erythraeum IMS101 0.00025019479
SSP321327 ncbi Synechococcus sp. JA-3-3Ab 0.00025749509
SSP1148 ncbi Synechocystis sp. PCC 6803 0.00026749549
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13) 0.00027779589
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C 0.00028569619
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen 0.00030509689
MAER449447 ncbi Microcystis aeruginosa NIES-843 0.00034729829
PMAR74547 ncbi Prochlorococcus marinus MIT 9313 0.00043116448
MACE188937 ncbi Methanosarcina acetivorans C2A 0.00048116538
MMAR426368 ncbi Methanococcus maripaludis C7 0.00057324197
CJEJ195099 ncbi Campylobacter jejuni RM1221 0.00061086738
CJEJ360109 ncbi Campylobacter jejuni doylei 269.97 0.00062546758
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 11168 0.00072726888
STHE322159 ncbi Streptococcus thermophilus LMD-9 0.00079686968
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-176 0.00080586978
SSP84588 ncbi Synechococcus sp. WH 8102 0.00083377008
SSP1131 Synechococcus sp. CC9605 0.00083377008
CJEJ407148 ncbi Campylobacter jejuni jejuni 81116 0.00095357128
STHE299768 ncbi Streptococcus thermophilus CNRZ1066 0.00097487148
STHE264199 ncbi Streptococcus thermophilus LMG 18311 0.00100777178
PTHE370438 ncbi Pelotomaculum thermopropionicum SI 0.001139111209
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00151477558
CCUR360105 ncbi Campylobacter curvus 525.92 0.00159567608
MSTA339860 ncbi Methanosphaera stadtmanae DSM 3091 0.00188812996
HMOD498761 ncbi Heliobacterium modesticaldum Ice1 0.001984511919
SSUI391296 ncbi Streptococcus suis 98HAH33 0.00199817828
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS 0.0021747644
SMUT210007 ncbi Streptococcus mutans UA159 0.00225277948
CCHL340177 ncbi Chlorobium chlorochromatii CaD3 0.00227527958
NSP103690 ncbi Nostoc sp. PCC 7120 0.002358612149
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 0.00271388138
TSP1755 Thermoanaerobacter sp. 0.003004912479
LINT189518 ncbi Leptospira interrogans serovar Lai str. 56601 0.00301658248
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-2901 0.003070812509
AVAR240292 ncbi Anabaena variabilis ATCC 29413 0.004080912909
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 23779 0.004109612919
ABUT367737 ncbi Arcobacter butzleri RM4018 0.00437888648
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G20 0.004436713029
CTEP194439 ncbi Chlorobium tepidum TLS 0.00458188698
MTHE264732 ncbi Moorella thermoacetica ATCC 39073 0.005091313229
PLUT319225 ncbi Chlorobium luteolum DSM 273 0.00528768858
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB 0.006069913489
DRED349161 ncbi Desulfotomaculum reducens MI-1 0.007118113729
MBAR269797 ncbi Methanosarcina barkeri Fusaro 0.00897616267
OCAR504832 ncbi Oligotropha carboxidovorans OM5 0.008992814089
LSPH444177 ncbi Lysinibacillus sphaericus C3-41 0.009525114179
TTHE300852 ncbi Thermus thermophilus HB8 0.00952639548


Names of the homologs of the genes in the group in each of these orgs
  G7910   G6141   EG11583   EG11577   EG11226   EG10500   EG10499   EG10496   EG10494   
AFUL224325 AF_1014AF_1014AF_1720AF_0628AF_0219AF_1720AF_1719AF_1014AF_1720
PMAR59920 PMN2A_0180PMN2A_0180PMN2A_1858PMN2A_0194PMN2A_0686PMN2A_1858PMN2A_0764PMN2A_0180PMN2A_1858
PMAR167539 PRO_0847PRO_0847PRO_0526PRO_0862PRO_1134PRO_0526PRO_1251PRO_0847PRO_0526
PMAR167555 NATL1_08121NATL1_08121NATL1_05831NATL1_08261NATL1_15201NATL1_05831NATL1_16041NATL1_08121NATL1_05831
DETH243164 DET_0834DET_0834DET_0833DET_0826DET_0830DET_0833DET_0832DET_0834DET_0833
MAEO419665 MAEO_0680MAEO_0680MAEO_0682MAEO_0849MAEO_0682MAEO_0683MAEO_0680MAEO_0682
DSP216389 DEHABAV1_0753DEHABAV1_0753DEHABAV1_0752DEHABAV1_0745DEHABAV1_0749DEHABAV1_0752DEHABAV1_0751DEHABAV1_0753DEHABAV1_0752
DSP255470 CBDBA815CBDBA815CBDBA813CBDBA804CBDBA808CBDBA813CBDBA812CBDBA815CBDBA813
MLAB410358 MLAB_0613MLAB_0613MLAB_0605MLAB_0603MLAB_0605MLAB_0606MLAB_0613MLAB_0605
CHOM360107 CHAB381_1769CHAB381_1769CHAB381_1165CHAB381_1264CHAB381_0491CHAB381_1165CHAB381_1166CHAB381_1769CHAB381_1165
MJAN243232 MJ_1276MJ_1276MJ_0277MJ_1195MJ_0277MJ_0161MJ_1276MJ_0277
MTHE187420 MTH1449MTH1449MTH1444MTH184MTH1481MTH1444MTH1443MTH1444
MTHE349307 MTHE_0673MTHE_0673MTHE_0110MTHE_1298MTHE_0110MTHE_0111MTHE_0673MTHE_0110
MMAR267377 MMP0318MMP0318MMP0650MMP1063MMP0650MMP0651MMP0318MMP0650
CMET456442 MBOO_1203MBOO_1203MBOO_1443MBOO_1442MBOO_1443MBOO_1444MBOO_1203MBOO_1443
MMAR402880 MMARC5_1356MMARC5_1356MMARC5_0954MMARC5_0531MMARC5_0954MMARC5_0953MMARC5_1356MMARC5_0954
MMAR444158 MMARC6_0633MMARC6_0633MMARC6_0239MMARC6_1596MMARC6_0239MMARC6_0238MMARC6_0633MMARC6_0239
SSP64471 GSYN1809GSYN1809GSYN2129GSYN1830GSYN1052GSYN2129GSYN0962GSYN1809GSYN2129
MBUR259564 MBUR_2246MBUR_2246MBUR_0710MBUR_0711MBUR_0710MBUR_0709MBUR_2246MBUR_0710
MMAR368407 MEMAR_0985MEMAR_0985MEMAR_1070MEMAR_1069MEMAR_1070MEMAR_1071MEMAR_0985MEMAR_1070
PMAR167540 PMM0774PMM0774PMM0786PMM1066PMM0526PMM1154PMM0774PMM0526
MKAN190192 MK1197MK0531MK0391MK0531MK0545MK1197MK0531
MHUN323259 MHUN_0139MHUN_0139MHUN_1242MHUN_1243MHUN_1242MHUN_1241MHUN_0139MHUN_1242
PMAR167542 P9515ORF_0850P9515ORF_0850P9515ORF_0836P9515ORF_1208P9515ORF_0626P9515ORF_1381P9515ORF_0850P9515ORF_0626
PMAR146891 A9601_08361A9601_08361A9601_08501A9601_11711A9601_05821A9601_13311A9601_08361A9601_05821
PMAR167546 P9301ORF_0850P9301ORF_0850P9301ORF_0863P9301ORF_1193P9301ORF_0565P9301ORF_1367P9301ORF_0850P9301ORF_0565
PMOB403833 PMOB_1593PMOB_1593PMOB_1592PMOB_1586PMOB_1589PMOB_1592PMOB_1591PMOB_1593PMOB_1592
NSP387092 NIS_0126NIS_0126NIS_0810NIS_0727NIS_1407NIS_0810NIS_0811NIS_0126NIS_0810
AAEO224324 AQ_837AQ_837AQ_451AQ_244AQ_2090AQ_451AQ_1851AQ_837AQ_451
PMAR74546 PMT9312_0782PMT9312_0782PMT9312_0794PMT9312_1077PMT9312_0526PMT9312_1253PMT9312_0782PMT9312_0526
PMAR93060 P9215_08681P9215_08681P9215_08811P9215_12011P9215_06071P9215_13601P9215_08681P9215_06071
SSP387093 SUN_2427SUN_2427SUN_1823SUN_1705SUN_1956SUN_1823SUN_1822SUN_2427SUN_1823
WSUC273121 WS0130WS0130WS0103WS1813WS0624WS0103WS0102WS0130WS0103
TELO197221 TLL1057TLL1057TLR1296TLR1600TLL1397TLR1296TLL0880TLL1057TLR1296
UMET351160 RCIX238RCIX238LRC534RCIX673LRC534LRC533RCIX1841LRC534
MMAZ192952 MM0259MM0259MM0670MM1284MM0670MM0669MM0259MM0670
TERY203124 TERY_0019TERY_0019TERY_2843TERY_4403TERY_2253TERY_2843TERY_1850TERY_0019TERY_2843
SSP321327 CYA_1697CYA_1697CYA_2073CYA_1798CYA_2223CYA_2073CYA_2130CYA_1697CYA_2073
SSP1148 SLR0452SLR0452SLR2088SLR1517SLR0186SLR2088SLL0065SLR0452SLR2088
SSP321332 CYB_1987CYB_1987CYB_0648CYB_1631CYB_1442CYB_0648CYB_0971CYB_1987CYB_0648
CDES477974 DAUD_0540DAUD_0540DAUD_0352DAUD_1279DAUD_0355DAUD_0352DAUD_0353DAUD_0540DAUD_0352
SWOL335541 SWOL_2147SWOL_2147SWOL_2146SWOL_2140SWOL_2143SWOL_2146SWOL_2145SWOL_2147SWOL_2146
MAER449447 MAE_28670MAE_28670MAE_50700MAE_00210MAE_54460MAE_50700MAE_48120MAE_28670MAE_50700
PMAR74547 PMT0560PMT0560PMT1239PMT0531PMT1121PMT1239PMT1176PMT1239
MACE188937 MA1802MA3373MA3792MA4615MA3792MA3791MA1802MA3792
MMAR426368 MMARC7_1320MMARC7_1320MMARC7_1674MMARC7_0316MMARC7_1675MMARC7_1320MMARC7_1674
CJEJ195099 CJE_0012CJE_0012CJE_1888CJE_1889CJE_0677CJE_0678CJE_0012CJE_0677
CJEJ360109 JJD26997_0013JJD26997_0013JJD26997_2095JJD26997_2096JJD26997_1096JJD26997_1095JJD26997_0013JJD26997_1096
CJEJ192222 CJ0013CJ0013CJ1718CCJ1719CCJ0574CJ0575CJ0013CJ0574
STHE322159 STER_1566STER_1851STER_1850STER_1170STER_1171STER_1850STER_1849STER_1851
CJEJ354242 CJJ81176_0039CJJ81176_0039CJJ81176_0016CJJ81176_0017CJJ81176_0602CJJ81176_0603CJJ81176_0039CJJ81176_0602
SSP84588 SYNW1123OR3467SYNW1123OR3467SYNW0784OR1664SYNW0730OR1620SYNW1746OR2980SYNW0680OR1970SYNW1123OR3467SYNW1746OR2980
SSP1131 SYNCC9605_1260SYNCC9605_1260SYNCC9605_0717SYNCC9605_1865SYNCC9605_1939SYNCC9605_1989SYNCC9605_1260SYNCC9605_0717
CJEJ407148 C8J_0012C8J_0012C8J_1624C8J_1625C8J_0536C8J_0537C8J_0012C8J_0536
STHE299768 STR1604STR1874STR1873STR1202STR1203STR1873STR1872STR1874
STHE264199 STU1604STU1874STU1873STU1202STU1203STU1873STU1872STU1874
PTHE370438 PTH_0526PTH_0526PTH_0530PTH_0534PTH_0531PTH_0527PTH_0528PTH_0526PTH_0527
CRUT413404 RMAG_0529RMAG_0529RMAG_0445RMAG_0099RMAG_0449RMAG_0445RMAG_0446RMAG_0445
CCUR360105 CCV52592_2036CCV52592_2036CCV52592_1365CCV52592_1193CCV52592_1428CCV52592_1429CCV52592_2036CCV52592_1428
MSTA339860 MSP_1576MSP_1576MSP_0029MSP_0199MSP_0028MSP_1576
HMOD498761 HM1_1511HM1_1511HM1_1979HM1_1518HM1_1515HM1_1979HM1_1512HM1_1511HM1_1514
SSUI391296 SSU98_1894SSU98_1894SSU98_1891SSU98_1953SSU98_1954SSU98_1891SSU98_1890SSU98_1891
CSUL444179 SMGWSS_265SMGWSS_265SMGWSS_040SMGWSS_043
SMUT210007 SMU_2128SMU_2128SMU_231SMU_1383SMU_1384SMU_231SMU_232SMU_231
CCHL340177 CAG_1906CAG_1906CAG_1905CAG_1901CAG_1905CAG_1903CAG_1906CAG_1905
NSP103690 ALR2771ALR2771ALL4613ALR1313ALR4840ALL4613ALR4627ALR2771ALL4613
LINT267671 LIC_11101LIC_11101LIC_11768LIC_11726LIC_11409LIC_11410LIC_11101LIC_12764
TSP1755 TETH514_0018TETH514_0018TETH514_0019TETH514_0017TETH514_0014TETH514_0019TETH514_0012TETH514_0018TETH514_0019
LINT189518 LA2958LA2958LA2152LA2202LA2570LA2569LA2958LA2570
CHYD246194 CHY_0516CHY_0516CHY_0517CHY_0524CHY_0521CHY_0517CHY_0518CHY_0516CHY_0517
AVAR240292 AVA_B0062AVA_0023AVA_2757AVA_2987AVA_2111AVA_2757AVA_2035AVA_0023AVA_2757
HAUR316274 HAUR_4450HAUR_4450HAUR_4449HAUR_4439HAUR_4446HAUR_4449HAUR_4448HAUR_4450HAUR_4449
ABUT367737 ABU_2100ABU_2100ABU_1013ABU_0456ABU_1156ABU_1157ABU_2100ABU_1156
DDES207559 DDE_0116DDE_0116DDE_2168DDE_3222DDE_3218DDE_2168DDE_2167DDE_0116DDE_0398
CTEP194439 CT_0619CT_0619CT_0618CT_0615CT_0618CT_0617CT_0619CT_0618
MTHE264732 MOTH_2259MOTH_2259MOTH_2258MOTH_2252MOTH_2255MOTH_2258MOTH_2257MOTH_2259MOTH_2258
PLUT319225 PLUT_0609PLUT_0609PLUT_0603PLUT_0602PLUT_0608PLUT_0605PLUT_0609PLUT_0608
SFUM335543 SFUM_0356SFUM_0356SFUM_3024SFUM_3031SFUM_0306SFUM_3024SFUM_3025SFUM_0356SFUM_3023
DRED349161 DRED_0280DRED_0280DRED_0281DRED_0288DRED_0285DRED_0281DRED_0282DRED_0280DRED_0284
MBAR269797 MBAR_A2069MBAR_A0218MBAR_A0942MBAR_A0218MBAR_A0219MBAR_A2069MBAR_A0218
OCAR504832 OCAR_6278OCAR_6278OCAR_6562OCAR_4283OCAR_5296OCAR_5290OCAR_5291OCAR_4462OCAR_5290
LSPH444177 BSPH_3390BSPH_3390BSPH_3389BSPH_3385BSPH_3386BSPH_3389BSPH_3388BSPH_3390BSPH_3389
TTHE300852 TTHA1234TTHA1234TTHA1213TTHA1230TTHA1210TTHA1213TTHA1212TTHA1213


Organism features enriched in list (features available for 80 out of the 83 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.000019979
Arrangment:Pairs 0.00854668112
GC_Content_Range4:60-100 0.00001756145
GC_Content_Range7:60-70 0.00008036134
Genome_Size_Range5:0-2 0.000023137155
Genome_Size_Range5:4-6 1.082e-68184
Genome_Size_Range9:1-2 3.853e-736128
Genome_Size_Range9:4-5 0.0071605696
Genome_Size_Range9:5-6 0.0000987288
Gram_Stain:Gram_Neg 0.000028329333
Gram_Stain:Gram_Pos 0.006021812150
Habitat:Aquatic 1.169e-73091
Habitat:Host-associated 2.984e-88206
Habitat:Specialized 0.00177661553
Optimal_temp.:- 0.006119045257
Optimal_temp.:35-40 0.002500633
Oxygen_Req:Aerobic 0.000051811185
Oxygen_Req:Anaerobic 8.567e-1238102
Oxygen_Req:Facultative 1.834e-96201
Oxygen_Req:Microaerophilic 0.0051249718
Pathogenic_in:Animal 0.0082891366
Pathogenic_in:Human 2.322e-710213
Pathogenic_in:No 2.130e-752226
Salinity:Non-halophilic 0.00652337106
Shape:Filament 0.007612147
Shape:Irregular_coccus 6.869e-81217
Shape:Oval 0.000043655
Shape:Rod 2.379e-1219347
Shape:Spiral 0.00243021134
Temp._range:Mesophilic 0.000288353473
Temp._range:Thermophilic 0.00004871435



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6141   EG11583   EG11577   EG11226   EG10500   EG10499   EG10496   EG10494   
G79100.9999990.9991040.9987090.9986250.9990820.998930.9998960.999287
G61410.9991560.9986840.9985490.999180.999040.9998970.999423
EG115830.9989610.9995050.9999670.999950.998850.999872
EG115770.9997770.9989320.9991550.9985830.998847
EG112260.9996520.9997320.9986670.999398
EG1050010.9990120.999972
EG104990.998820.999938
EG104960.999539
EG10494



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PAIRWISE BLAST SCORES:

  G7910   G6141   EG11583   EG11577   EG11226   EG10500   EG10499   EG10496   EG10494   
G79100.0f00-------
G614100.0f0-------
EG11583--0.0f0--2.4e-79---
EG11577---0.0f0-----
EG11226----0.0f0----
EG10500-----0.0f0---
EG10499------0.0f0--
EG10496-------0.0f0-
EG10494--------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- LEUSYN-PWY (leucine biosynthesis) (degree of match pw to cand: 0.333, degree of match cand to pw: 0.222, average score: 0.956)
  Genes in pathway or complex:
   *in cand* 0.9991 0.9986 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
             0.9963 0.9943 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.7364 0.3213 EG11040 (tyrB) TYRB-MONOMER (TyrB)
   *in cand* 0.9993 0.9985 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
             0.9979 0.9949 EG11575 (leuD) LEUD-MONOMER (LeuD)
             0.9979 0.9945 EG11576 (leuC) LEUC-MONOMER (LeuC)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9988 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9993 0.9986 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
   *in cand* 0.9995 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
   *in cand* 0.9995 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9993 0.9985 G6141 (yagF) G6141-MONOMER (CP4-6 prophage; predicted dehydratase)
   *in cand* 0.9993 0.9986 G7910 (yjhG) G7910-MONOMER (KpLE2 phage-like element; predicted dehydratase)

- BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis) (degree of match pw to cand: 0.375, degree of match cand to pw: 0.667, average score: 0.935)
  Genes in pathway or complex:
             0.9979 0.9949 EG11575 (leuD) LEUD-MONOMER (LeuD)
             0.9979 0.9945 EG11576 (leuC) LEUC-MONOMER (LeuC)
   *in cand* 0.9993 0.9985 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
             0.7364 0.3213 EG11040 (tyrB) TYRB-MONOMER (TyrB)
   *in cand* 0.9991 0.9986 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
             0.9771 0.9323 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
             0.8005 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
             0.9992 0.9983 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9996 0.9988 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9995 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
             0.9993 0.9981 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
             0.9963 0.9943 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
   *in cand* 0.9993 0.9986 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9993 0.9985 G6141 (yagF) G6141-MONOMER (CP4-6 prophage; predicted dehydratase)
   *in cand* 0.9993 0.9986 G7910 (yjhG) G7910-MONOMER (KpLE2 phage-like element; predicted dehydratase)

- THREOCAT-PWY (superpathway of threonine metabolism) (degree of match pw to cand: 0.167, degree of match cand to pw: 0.444, average score: 0.637)
  Genes in pathway or complex:
             0.5377 0.2991 M014 (mhpF) MHPF-MONOMER (acetaldehyde dehydrogenase 2)
             0.2855 0.0455 EG10031 (adhE) ADHE-MONOMER (AdhE)
             0.4463 0.1541 G6455 (ltaE) LTAA-MONOMER (LtaA)
             0.5427 0.1618 EG13139 (tynA) AMINEOXID-MONOMER (TynA)
             0.6302 0.3133 EG10512 (kbl) AKBLIG-MONOMER (Kbl)
             0.5068 0.1589 EG10027 (ackA) ACETATEKINA-MONOMER (propionate kinase / acetate kinase)
             0.5546 0.0912 EG11172 (tdcD) PROPKIN-MONOMER (propionate kinase)
             0.3584 0.0033 EG20173 (pta) PHOSACETYLTRANS-MONOMER (Pta)
             0.3110 0.0774 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
             0.3365 0.1011 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
             0.9778 0.9407 EG10990 (tdcB) THREDEHYDCAT-MONOMER (TdcB)
             0.9771 0.9323 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
             0.8005 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
             0.9992 0.9983 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9996 0.9988 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9995 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
             0.9993 0.9981 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
             0.9963 0.9943 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
   *in cand* 0.9993 0.9986 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.6798 0.3444 EG11904 (gldA) GLYCDEH-MONOMER (GldA)
             0.8521 0.5870 EG10993 (tdh) THREODEHYD-MONOMER (Tdh)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9985 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9991 0.9986 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
   *in cand* 0.9995 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9993 0.9985 G6141 (yagF) G6141-MONOMER (CP4-6 prophage; predicted dehydratase)
   *in cand* 0.9993 0.9986 G7910 (yjhG) G7910-MONOMER (KpLE2 phage-like element; predicted dehydratase)

- VALSYN-PWY (valine biosynthesis) (degree of match pw to cand: 0.400, degree of match cand to pw: 0.444, average score: 0.972)
  Genes in pathway or complex:
   *in cand* 0.9993 0.9986 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.9963 0.9943 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.9993 0.9981 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
             0.9992 0.9983 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9996 0.9988 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
             0.8005 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
   *in cand* 0.9995 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9985 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9991 0.9986 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
   *in cand* 0.9995 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9993 0.9985 G6141 (yagF) G6141-MONOMER (CP4-6 prophage; predicted dehydratase)
   *in cand* 0.9993 0.9986 G7910 (yjhG) G7910-MONOMER (KpLE2 phage-like element; predicted dehydratase)

- ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.222, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9988 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9993 0.9986 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
   *in cand* 0.9993 0.9985 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9991 0.9986 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
   *in cand* 0.9995 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9993 0.9985 G6141 (yagF) G6141-MONOMER (CP4-6 prophage; predicted dehydratase)
   *in cand* 0.9993 0.9986 G7910 (yjhG) G7910-MONOMER (KpLE2 phage-like element; predicted dehydratase)

- ILEUSYN-PWY (isoleucine biosynthesis I (from threonine)) (degree of match pw to cand: 0.364, degree of match cand to pw: 0.444, average score: 0.973)
  Genes in pathway or complex:
   *in cand* 0.9993 0.9986 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.9963 0.9943 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.9993 0.9981 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
   *in cand* 0.9995 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
             0.9992 0.9983 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9996 0.9988 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
             0.8005 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
             0.9771 0.9323 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9985 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9991 0.9986 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
   *in cand* 0.9995 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9993 0.9985 G6141 (yagF) G6141-MONOMER (CP4-6 prophage; predicted dehydratase)
   *in cand* 0.9993 0.9986 G7910 (yjhG) G7910-MONOMER (KpLE2 phage-like element; predicted dehydratase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10499 EG10500 (centered at EG10499)
G7910 (centered at G7910)
G6141 (centered at G6141)
EG11583 (centered at EG11583)
EG10496 (centered at EG10496)
EG10494 (centered at EG10494)
EG11226 EG11577 (centered at EG11226)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7910   G6141   EG11583   EG11577   EG11226   EG10500   EG10499   EG10496   EG10494   
355/623347/623322/623399/623373/623387/623410/623401/623344/623
AAEO224324:0:Tyes418418157013051571138418157
AAUR290340:2:Tyes210021003083--209920980-
AAVE397945:0:Tyes10141014-0186018641863283-
ABAC204669:0:Tyes192192-01-190192191
ABAU360910:0:Tyes--23571954-235723560-
ABOR393595:0:Tyes0031013174693103112173-
ABUT367737:0:Tyes16401640-55506986991640698
ACAU438753:0:Tyes-11163219032772099209832622099
ACEL351607:0:Tyes001--12-1
ACRY349163:8:Tyes-19456211620023112310514-
ADEH290397:0:Tyes2154215419341021541
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