CANDIDATE ID: 171

CANDIDATE ID: 171

NUMBER OF GENES: 9
AVERAGE SCORE:    9.9948531e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    7.7777778e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G7236 (oxc) (b2373)
   Products of gene:
     - G7236-MONOMER (oxalyl-CoA decarboxylase)
     - CPLX0-7878 (oxalyl-CoA decarboxylase)
       Reactions:
        oxalyl-CoA + H+  =  CO2 + formyl-CoA

- G6141 (yagF) (b0269)
   Products of gene:
     - G6141-MONOMER (CP4-6 prophage; predicted dehydratase)

- EG11583 (gcl) (b0507)
   Products of gene:
     - GLYOCARBOLIG-MONOMER (Gcl)
     - GLYOCARBOLIG-CPLX (glyoxylate carboligase)
       Reactions:
        2 glyoxylate + H+  ->  CO2 + tartronate semialdehyde
         In pathways
         GLYCOL-GLYOXDEG-PWY (superpathway of glycol metabolism and degradation)
         GLYCOLATEMET-PWY (glycolate and glyoxylate degradation I)

- EG11226 (leuA) (b0074)
   Products of gene:
     - 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
       Reactions:
        2-oxoisovalerate + acetyl-CoA + H2O  ->  (2S)-2-isopropylmalate + coenzyme A + H+
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)

- EG10500 (ilvI) (b0077)
   Products of gene:
     - ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
     - ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase)
       Reactions:
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)

- EG10499 (ilvH) (brnP)
   Products of gene:
     - ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
     - ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase)
       Reactions:
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)

- EG10496 (ilvD) (b3771)
   Products of gene:
     - DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
     - DIHYDROXYACIDDEHYDRAT-CPLX (dihydroxy acid dehydratase)
       Reactions:
        2,3-dihydroxy-isovalerate  ->  2-oxoisovalerate + H2O
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         VALSYN-PWY (valine biosynthesis)
        2,3-dihydroxy-3-methylvalerate  ->  2-keto-3-methyl-valerate + H2O
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)

- EG10495 (ilvC) (b3774)
   Products of gene:
     - KETOLREDUCTOISOM-MONOMER (IlvC)
     - CPLX0-7643 (acetohydroxy acid isomeroreductase)
       Reactions:
        2-aceto-2-hydroxy-butanoate + NADPH + H+  =  2,3-dihydroxy-3-methylvalerate + NADP+
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)
        2,3-dihydroxy-isovalerate + NADP+  =  (S)-2-acetolactate + NADPH + H+
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         VALSYN-PWY (valine biosynthesis)

- EG10494 (ilvB) (b3671)
   Products of gene:
     - LARGEILVB-MONOMER (IlvB)
     - ACETOLACTSYNI-CPLX (acetohydroxybutanoate synthase / acetolactate synthase)
       Reactions:
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)



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ORGANISMS CONTAINING AT LEAST 8 GENES FROM THE GROUP:

Total number of orgs: 205
Effective number of orgs (counting one per cluster within 468 clusters): 158

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317588
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329538
YPES386656 ncbi Yersinia pestis Pestoides F8
YPES377628 ncbi Yersinia pestis Nepal5168
YPES360102 ncbi Yersinia pestis Antiqua8
YPES349746 ncbi Yersinia pestis Angola8
YPES214092 ncbi Yersinia pestis CO928
YPES187410 ncbi Yersinia pestis KIM 108
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80818
XAUT78245 ncbi Xanthobacter autotrophicus Py29
WSUC273121 ncbi Wolinella succinogenes DSM 17409
VVUL216895 ncbi Vibrio vulnificus CMCP68
VVUL196600 ncbi Vibrio vulnificus YJ0169
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106338
VFIS312309 ncbi Vibrio fischeri ES1148
VCHO345073 ncbi Vibrio cholerae O3958
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169618
UMET351160 ncbi uncultured methanogenic archaeon RC-I9
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB48
TSP1755 Thermoanaerobacter sp.9
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332238
TERY203124 ncbi Trichodesmium erythraeum IMS1019
TELO197221 ncbi Thermosynechococcus elongatus BP-18
TCRU317025 ncbi Thiomicrospira crunogena XCL-28
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen9
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT29
STHE322159 ncbi Streptococcus thermophilus LMD-98
STHE299768 ncbi Streptococcus thermophilus CNRZ10668
STHE292459 ncbi Symbiobacterium thermophilum IAM 148638
STHE264199 ncbi Streptococcus thermophilus LMG 183118
SSP94122 ncbi Shewanella sp. ANA-39
SSP84588 ncbi Synechococcus sp. WH 81028
SSP64471 ncbi Synechococcus sp. CC93119
SSP387093 ncbi Sulfurovum sp. NBC37-19
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)8
SSP321327 ncbi Synechococcus sp. JA-3-3Ab9
SSP1148 ncbi Synechocystis sp. PCC 68038
SSP1131 Synechococcus sp. CC96058
SSON300269 ncbi Shigella sonnei Ss0468
SSED425104 ncbi Shewanella sediminis HAW-EB38
SPRO399741 ncbi Serratia proteamaculans 5689
SPEA398579 ncbi Shewanella pealeana ATCC 7003459
SONE211586 ncbi Shewanella oneidensis MR-19
SMEL266834 ncbi Sinorhizobium meliloti 10218
SMED366394 ncbi Sinorhizobium medicae WSM4198
SLOI323850 ncbi Shewanella loihica PV-49
SHIGELLA ncbi Shigella flexneri 2a str. 2457T8
SHAL458817 ncbi Shewanella halifaxensis HAW-EB49
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB9
SFLE373384 ncbi Shigella flexneri 5 str. 84018
SFLE198214 ncbi Shigella flexneri 2a str. 3018
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23388
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4769
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B678
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91508
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT188
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty28
SELO269084 ncbi Synechococcus elongatus PCC 63018
SDYS300267 ncbi Shigella dysenteriae Sd1978
SDEN318161 ncbi Shewanella denitrificans OS2178
SCO ncbi Streptomyces coelicolor A3(2)8
SBOY300268 ncbi Shigella boydii Sb2278
SBAL402882 ncbi Shewanella baltica OS1859
SBAL399599 ncbi Shewanella baltica OS1959
SARE391037 ncbi Salinispora arenicola CNS-2058
RSP101510 ncbi Rhodococcus jostii RHA18
RPAL316058 ncbi Rhodopseudomonas palustris HaA29
RPAL316057 ncbi Rhodopseudomonas palustris BisB59
RPAL316056 ncbi Rhodopseudomonas palustris BisB189
RPAL316055 ncbi Rhodopseudomonas palustris BisA539
RPAL258594 ncbi Rhodopseudomonas palustris CGA0099
RMET266264 ncbi Ralstonia metallidurans CH348
REUT381666 ncbi Ralstonia eutropha H168
REUT264198 ncbi Ralstonia eutropha JMP1348
PTHE370438 ncbi Pelotomaculum thermopropionicum SI9
PSP296591 ncbi Polaromonas sp. JS6668
PMOB403833 ncbi Petrotoga mobilis SJ959
PMEN399739 ncbi Pseudomonas mendocina ymp8
PMAR93060 ncbi Prochlorococcus marinus MIT 92158
PMAR74547 ncbi Prochlorococcus marinus MIT 93138
PMAR59920 ncbi Prochlorococcus marinus NATL2A9
PMAR167555 ncbi Prochlorococcus marinus NATL1A9
PMAR167546 ncbi Prochlorococcus marinus MIT 93018
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13759
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO18
PING357804 ncbi Psychromonas ingrahamii 379
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1258
PCAR338963 ncbi Pelobacter carbinolicus DSM 23809
OCAR504832 ncbi Oligotropha carboxidovorans OM59
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2558
NSP387092 ncbi Nitratiruptor sp. SB155-29
NSP103690 ncbi Nostoc sp. PCC 71209
NHAM323097 ncbi Nitrobacter hamburgensis X148
NFAR247156 ncbi Nocardia farcinica IFM 101528
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-18
MTHE349307 ncbi Methanosaeta thermophila PT9
MTHE264732 ncbi Moorella thermoacetica ATCC 390739
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H8
MSME246196 ncbi Mycobacterium smegmatis MC2 1558
MMAZ192952 ncbi Methanosarcina mazei Go19
MMAR444158 ncbi Methanococcus maripaludis C69
MMAR426368 ncbi Methanococcus maripaludis C78
MMAR402880 ncbi Methanococcus maripaludis C59
MMAR368407 ncbi Methanoculleus marisnigri JR19
MMAR267377 ncbi Methanococcus maripaludis S29
MLAB410358 ncbi Methanocorpusculum labreanum Z8
MKAN190192 ncbi Methanopyrus kandleri AV199
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26619
MHUN323259 ncbi Methanospirillum hungatei JF-19
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK8
MEXT419610 ncbi Methylobacterium extorquens PA18
MCAP243233 ncbi Methylococcus capsulatus Bath8
MBUR259564 ncbi Methanococcoides burtonii DSM 62429
MBAR269797 ncbi Methanosarcina barkeri Fusaro9
MAQU351348 ncbi Marinobacter aquaeolei VT89
MAER449447 ncbi Microcystis aeruginosa NIES-8439
MAEO419665 ncbi Methanococcus aeolicus Nankai-39
MACE188937 ncbi Methanosarcina acetivorans C2A9
MABS561007 ncbi Mycobacterium abscessus ATCC 199778
LSPH444177 ncbi Lysinibacillus sphaericus C3-418
LCHO395495 ncbi Leptothrix cholodnii SP-68
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785788
HMOD498761 ncbi Heliobacterium modesticaldum Ice19
HCHE349521 ncbi Hahella chejuensis KCTC 23968
HARS204773 ncbi Herminiimonas arsenicoxydans8
GVIO251221 ncbi Gloeobacter violaceus PCC 74218
GURA351605 ncbi Geobacter uraniireducens Rf49
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-29
GSUL243231 ncbi Geobacter sulfurreducens PCA9
GMET269799 ncbi Geobacter metallireducens GS-159
GKAU235909 ncbi Geobacillus kaustophilus HTA4268
ESP42895 Enterobacter sp.9
EFER585054 ncbi Escherichia fergusonii ATCC 354698
ECOO157 ncbi Escherichia coli O157:H7 EDL9338
ECOL83334 Escherichia coli O157:H78
ECOL585397 ncbi Escherichia coli ED1a8
ECOL585057 ncbi Escherichia coli IAI398
ECOL585056 ncbi Escherichia coli UMN0269
ECOL585055 ncbi Escherichia coli 559898
ECOL585035 ncbi Escherichia coli S889
ECOL585034 ncbi Escherichia coli IAI18
ECOL481805 ncbi Escherichia coli ATCC 87398
ECOL469008 ncbi Escherichia coli BL21(DE3)8
ECOL439855 ncbi Escherichia coli SMS-3-58
ECOL413997 ncbi Escherichia coli B str. REL6068
ECOL409438 ncbi Escherichia coli SE118
ECOL405955 ncbi Escherichia coli APEC O18
ECOL364106 ncbi Escherichia coli UTI898
ECOL362663 ncbi Escherichia coli 5368
ECOL331111 ncbi Escherichia coli E24377A8
ECOL316407 ncbi Escherichia coli K-12 substr. W31109
ECOL199310 ncbi Escherichia coli CFT0738
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10438
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough8
DSP255470 ncbi Dehalococcoides sp. CBDB18
DSP216389 ncbi Dehalococcoides sp. BAV19
DRED349161 ncbi Desulfotomaculum reducens MI-19
DHAF138119 ncbi Desulfitobacterium hafniense Y518
DETH243164 ncbi Dehalococcoides ethenogenes 1959
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G208
DARO159087 ncbi Dechloromonas aromatica RCB8
CPSY167879 ncbi Colwellia psychrerythraea 34H8
CPHY357809 ncbi Clostridium phytofermentans ISDg8
CMET456442 ncbi Candidatus Methanoregula boonei 6A89
CKLU431943 ncbi Clostridium kluyveri DSM 5558
CJEJ407148 ncbi Campylobacter jejuni jejuni 811168
CJEJ360109 ncbi Campylobacter jejuni doylei 269.978
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1768
CJEJ195099 ncbi Campylobacter jejuni RM12218
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111688
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29019
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3819
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130328
CEFF196164 ncbi Corynebacterium efficiens YS-3148
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131298
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C9
CCUR360105 ncbi Campylobacter curvus 525.928
BWEI315730 ncbi Bacillus weihenstephanensis KBAB48
BTHU412694 ncbi Bacillus thuringiensis Al Hakam8
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-279
BSUB ncbi Bacillus subtilis subtilis 1688
BSP376 Bradyrhizobium sp.9
BPUM315750 ncbi Bacillus pumilus SAFR-0328
BLIC279010 ncbi Bacillus licheniformis ATCC 145808
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1109
BCLA66692 ncbi Bacillus clausii KSM-K169
BCER572264 ncbi Bacillus cereus 03BB1028
BCER405917 Bacillus cereus W8
BCER315749 ncbi Bacillus cytotoxicus NVH 391-988
BCER288681 ncbi Bacillus cereus E33L8
BCER226900 ncbi Bacillus cereus ATCC 145799
BANT592021 ncbi Bacillus anthracis A02488
BANT568206 ncbi Bacillus anthracis CDC 6848
BANT261594 ncbi Bacillus anthracis Ames Ancestor8
BANT260799 ncbi Bacillus anthracis Sterne8
BAMY326423 ncbi Bacillus amyloliquefaciens FZB428
AVAR240292 ncbi Anabaena variabilis ATCC 294139
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4498
AMET293826 ncbi Alkaliphilus metalliredigens QYMF8
AHYD196024 Aeromonas hydrophila dhakensis8
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43049
ACAU438753 ncbi Azorhizobium caulinodans ORS 5719
ABUT367737 ncbi Arcobacter butzleri RM40188
ABOR393595 ncbi Alcanivorax borkumensis SK28
AAEO224324 ncbi Aquifex aeolicus VF59


Names of the homologs of the genes in the group in each of these orgs
  G7236   G6141   EG11583   EG11226   EG10500   EG10499   EG10496   EG10495   EG10494   
YPSE349747 YPSIP31758_3401YPSIP31758_3401YPSIP31758_3405YPSIP31758_3401YPSIP31758_3400YPSIP31758_0157YPSIP31758_0163YPSIP31758_1839
YPSE273123 YPTB0675YPTB0675YPTB0672YPTB0675YPTB0676YPTB0137YPTB0145YPTB2216
YPES386656 YPDSF_3102YPDSF_3102YPDSF_3106YPDSF_3102YPDSF_3101YPDSF_3510YPDSF_3501YPDSF_0849
YPES377628 YPN_0407YPN_0407YPN_0403YPN_0407YPN_0408YPN_0069YPN_0077YPN_1755
YPES360102 YPA_3560YPA_3560YPA_3564YPA_3560YPA_3559YPA_0124YPA_0132YPA_1642
YPES349746 YPANGOLA_A2932YPANGOLA_A2932YPANGOLA_A2936YPANGOLA_A2932YPANGOLA_A2931YPANGOLA_A0485YPANGOLA_A0493YPANGOLA_A0482
YPES214092 YPO0539YPO0539YPO0533YPO0539YPO0540YPO3897YPO3888YPO2293
YPES187410 Y3640Y3640Y3645Y3640Y3639Y0338Y0345Y2126
YENT393305 YE0148YE0658YE0654YE0658YE0659YE0151YE0155YE2060
XAUT78245 XAUT_0486XAUT_1022XAUT_2367XAUT_1329XAUT_1488XAUT_1489XAUT_0070XAUT_1490XAUT_1488
WSUC273121 WS0103WS0130WS0103WS0624WS0103WS0102WS0130WS1878WS0103
VVUL216895 VV1_0648VV1_0648VV1_0654VV1_0648VV1_0647VV1_1029VV1_1077VV1_1032
VVUL196600 VV0495VVA1581VV0495VV0487VV0495VV0496VV3243VV0035VV3240
VPAR223926 VP0352VP0352VP0346VP0352VP0353VP3061VP0035VP3058
VFIS312309 VF2263VF2263VF0295VF2263VF2262VF2559VF2528VF2556
VCHO345073 VC0395_A2059VC0395_A2059VC0395_A2065VC0395_A2059VC0395_A2058VC0395_A2491VC0395_A2550VC0395_A2488
VCHO VC2483VC2483VC2490VC2483VC2482VC0028VC0162VC0031
UMET351160 LRC534RCIX238LRC534RCIX673LRC534LRC533RCIX1841LRC519LRC534
TTEN273068 TTE0021TTE0020TTE0021TTE0016TTE0014TTE0020TTE0015TTE0021
TSP1755 TETH514_0019TETH514_0018TETH514_0019TETH514_0014TETH514_0019TETH514_0012TETH514_0018TETH514_0013TETH514_0019
TPSE340099 TETH39_0020TETH39_0019TETH39_0020TETH39_0015TETH39_0013TETH39_0019TETH39_0014TETH39_0020
TERY203124 TERY_2843TERY_0019TERY_2843TERY_2253TERY_2843TERY_1850TERY_0019TERY_4335TERY_2843
TELO197221 TLR1296TLL1057TLR1296TLL1397TLR1296TLL0880TLL1057TLR1296
TCRU317025 TCR_0051TCR_0634TCR_0611TCR_0634TCR_0635TCR_0599TCR_0636TCR_0634
SWOL335541 SWOL_2146SWOL_2147SWOL_2146SWOL_2143SWOL_2146SWOL_2145SWOL_2147SWOL_2144SWOL_2146
STYP99287 STM3796STM3531STM0517STM0113STM0116STM0117STM3904STM3909STM3901
STHE322159 STER_1850STER_1851STER_1850STER_1171STER_1850STER_1849STER_1851STER_1848
STHE299768 STR1873STR1874STR1873STR1203STR1873STR1872STR1874STR1871
STHE292459 STH1014STH2685STH2684STH2687STH2684STH2689STH2685STH2684
STHE264199 STU1873STU1874STU1873STU1203STU1873STU1872STU1874STU1871
SSP94122 SHEWANA3_0356SHEWANA3_0358SHEWANA3_2269SHEWANA3_3761SHEWANA3_2269SHEWANA3_2270SHEWANA3_0358SHEWANA3_0355SHEWANA3_0356
SSP84588 SYNW1746OR2980SYNW1123OR3467SYNW0730OR1620SYNW1746OR2980SYNW0680OR1970SYNW1123OR3467SYNW1650OR0554SYNW1746OR2980
SSP64471 GSYN2129GSYN1809GSYN2129GSYN1052GSYN2129GSYN0962GSYN1809GSYN0766GSYN2129
SSP387093 SUN_1823SUN_2427SUN_1823SUN_1956SUN_1823SUN_1822SUN_2427SUN_0443SUN_1823
SSP321332 CYB_0648CYB_1987CYB_0648CYB_1442CYB_0648CYB_0971CYB_1987CYB_0648
SSP321327 CYA_2073CYA_1697CYA_2073CYA_2223CYA_2073CYA_2130CYA_1697CYA_0246CYA_2073
SSP1148 SLR2088SLR0452SLR2088SLR0186SLR2088SLL0065SLR0452SLR2088
SSP1131 SYNCC9605_0717SYNCC9605_1260SYNCC9605_0717SYNCC9605_1939SYNCC9605_1989SYNCC9605_1260SYNCC9605_0839SYNCC9605_0717
SSON300269 SSO_2464SSO_0084SSO_0081SSO_0084SSO_0085SSO_3942SSO_3945SSO_3939
SSED425104 SSED_4165SSED_2666SSED_0393SSED_2666SSED_2667SSED_4162SSED_4166SSED_4165
SPRO399741 SPRO_0748SPRO_0708SPRO_0748SPRO_0745SPRO_0748SPRO_0749SPRO_4757SPRO_4751SPRO_0734
SPEA398579 SPEA_1911SPEA_0348SPEA_1911SPEA_3828SPEA_1911SPEA_1910SPEA_0348SPEA_0344SPEA_0345
SONE211586 SO_4347SO_4345SO_2279SO_4236SO_2279SO_2278SO_4345SO_4349SO_4347
SMEL266834 SMC01431SMB20890SMB20681SMC01431SMC01430SMC04045SMC04346SMC01431
SMED366394 SMED_2008SMED_4478SMED_4308SMED_2008SMED_2007SMED_2723SMED_1962SMED_2008
SLOI323850 SHEW_0289SHEW_0292SHEW_1776SHEW_3472SHEW_1776SHEW_1775SHEW_0292SHEW_0288SHEW_0289
SHIGELLA S2577GCLLEUAILVIILVHILVDILVCILVB
SHAL458817 SHAL_2387SHAL_3941SHAL_2387SHAL_0438SHAL_2387SHAL_2388SHAL_3941SHAL_3945SHAL_3944
SFUM335543 SFUM_0296SFUM_0356SFUM_3024SFUM_0306SFUM_3024SFUM_3025SFUM_0356SFUM_3026SFUM_3023
SFLE373384 SFV_2432SFV_0474SFV_0066SFV_0068SFV_0069SFV_3731SFV_3729SFV_3838
SFLE198214 AAN43951.1AAN42100.1AAN41734.1AAN41737.1AAN41738.1AAN45283.1AAN45286.1AAN45280.1
SERY405948 SACE_6159SACE_1280SACE_6729SACE_6159SACE_6158SACE_6161SACE_6157SACE_6159
SENT454169 SEHA_C0127SEHA_C3840SEHA_C0625SEHA_C0124SEHA_C0127SEHA_C0128SEHA_C4235SEHA_C4240SEHA_C4232
SENT321314 SCH_0113SCH_0113SCH_0109SCH_0113SCH_0114SCH_3809SCH_3814SCH_3716
SENT295319 SPA0118SPA2205SPA0115SPA0118SPA0119SPA3743SPA3748SPA3740
SENT220341 STY0135STY0565STY0132STY0135STY0136STY3653STY3648STY3986
SENT209261 T0120T2343T0117T0120T0121T3394T3389T3722
SELO269084 SYC1366_CSYC1366_CSYC0145_DSYC1366_CSYC1672_CSYC0898_CSYC0010_CSYC1366_C
SDYS300267 SDY_2571SDY_0395SDY_0101SDY_0107SDY_0108SDY_3977SDY_3974SDY_4155
SDEN318161 SDEN_3414SDEN_3412SDEN_0334SDEN_2122SDEN_2123SDEN_3412SDEN_3415SDEN_3414
SCO SCO6584SCO1176SCO6201SCO5512SCO5513SCO3345SCO7154SCO5512
SBOY300268 SBO_2399SBO_0411SBO_0061SBO_0065SBO_0066SBO_3782SBO_3785SBO_3779
SBAL402882 SHEW185_2374SHEW185_4007SHEW185_2374SHEW185_0385SHEW185_2374SHEW185_2375SHEW185_4007SHEW185_4010SHEW185_4009
SBAL399599 SBAL195_4128SBAL195_4126SBAL195_2490SBAL195_0397SBAL195_2490SBAL195_2491SBAL195_4126SBAL195_4129SBAL195_4128
SARE391037 SARE_1100SARE_1121SARE_1123SARE_1123SARE_1124SARE_1121SARE_1125SARE_1123
RSP101510 RHA1_RO06486RHA1_RO05087RHA1_RO03223RHA1_RO06486RHA1_RO06487RHA1_RO06484RHA1_RO06488RHA1_RO06486
RPAL316058 RPB_3345RPB_3247RPB_3345RPB_3330RPB_3345RPB_3344RPB_4066RPB_3341RPB_3345
RPAL316057 RPD_2098RPD_2806RPD_2098RPD_2112RPD_2098RPD_2100RPD_3804RPD_2102RPD_2098
RPAL316056 RPC_3255RPC_4380RPC_3255RPC_3235RPC_3255RPC_3253RPC_4321RPC_3248RPC_3255
RPAL316055 RPE_2187RPE_2261RPE_2187RPE_2209RPE_2187RPE_2189RPE_4363RPE_2195RPE_2187
RPAL258594 RPA0108RPA2155RPA2031RPA2046RPA2031RPA2032RPA1463RPA2035RPA2031
RMET266264 RMET_4360RMET_4585RMET_3448RMET_0918RMET_0911RMET_0912RMET_4585RMET_0913
REUT381666 H16_B1712H16_A2987H16_A3598H16_A1041H16_A1035H16_A1036H16_B0280H16_A1037
REUT264198 REUT_B4664REUT_A0639REUT_A3291REUT_A0953REUT_A0947REUT_A0948REUT_A2432REUT_A0949
PTHE370438 PTH_0527PTH_0526PTH_0530PTH_0531PTH_0527PTH_0528PTH_0526PTH_0529PTH_0527
PSP296591 BPRO_2800BPRO_2052BPRO_4561BPRO_2322BPRO_2317BPRO_2318BPRO_2052BPRO_2319
PMOB403833 PMOB_1592PMOB_1593PMOB_1592PMOB_1589PMOB_1592PMOB_1591PMOB_1593PMOB_1590PMOB_1592
PMEN399739 PMEN_1006PMEN_2769PMEN_0989PMEN_1006PMEN_1007PMEN_4205PMEN_1009PMEN_1006
PMAR93060 P9215_06071P9215_08681P9215_12011P9215_06071P9215_13601P9215_08681P9215_15441P9215_06071
PMAR74547 PMT1239PMT0560PMT1239PMT1121PMT1239PMT1176PMT0313PMT1239
PMAR59920 PMN2A_1858PMN2A_0180PMN2A_1858PMN2A_0686PMN2A_1858PMN2A_0764PMN2A_0180PMN2A_0881PMN2A_1858
PMAR167555 NATL1_05831NATL1_08121NATL1_05831NATL1_15201NATL1_05831NATL1_16041NATL1_08121NATL1_17361NATL1_05831
PMAR167546 P9301ORF_0565P9301ORF_0850P9301ORF_1193P9301ORF_0565P9301ORF_1367P9301ORF_0850P9301ORF_1528P9301ORF_0565
PMAR167539 PRO_0526PRO_0847PRO_0526PRO_1134PRO_0526PRO_1251PRO_0847PRO_1389PRO_0526
PLUM243265 PLU3666PLU3666PLU3673PLU3666PLU3665PLU4682PLU4668PLU4685
PING357804 PING_3430PING_2151PING_3430PING_0216PING_3430PING_3431PING_0346PING_0853PING_0348
PHAL326442 PSHAB0464PSHAB0129PSHAA2894PSHAB0464PSHAB0463PSHAA2769PSHAA0849PSHAA2771
PCAR338963 PCAR_1910PCAR_1911PCAR_1910PCAR_1907PCAR_1910PCAR_1909PCAR_1911PCAR_2518PCAR_1910
OCAR504832 OCAR_6551OCAR_6278OCAR_6562OCAR_5296OCAR_5290OCAR_5291OCAR_4462OCAR_5292OCAR_5290
NWIN323098 NWI_2343NWI_2343NWI_2338NWI_2343NWI_2342NWI_0213NWI_2341NWI_2343
NSP387092 NIS_0810NIS_0126NIS_0810NIS_1407NIS_0810NIS_0811NIS_0126NIS_1161NIS_0810
NSP103690 ALL4613ALR2771ALL4613ALR4840ALL4613ALR4627ALR2771ALL2315ALL4613
NHAM323097 NHAM_2722NHAM_2722NHAM_2715NHAM_2722NHAM_2721NHAM_0169NHAM_2720NHAM_2722
NFAR247156 NFA30060NFA11740NFA42320NFA42320NFA42310NFA42340NFA42300NFA30060
MVAN350058 MVAN_2122MVAN_0173MVAN_2122MVAN_2122MVAN_2123MVAN_1161MVAN_2124MVAN_2122
MTHE349307 MTHE_0110MTHE_0673MTHE_0110MTHE_1298MTHE_0110MTHE_0111MTHE_0673MTHE_0112MTHE_0110
MTHE264732 MOTH_2258MOTH_2259MOTH_2258MOTH_2255MOTH_2258MOTH_2257MOTH_2259MOTH_1350MOTH_2258
MTHE187420 MTH1444MTH1449MTH1444MTH1481MTH1444MTH1443MTH1442MTH1444
MSME246196 MSMEG_0157MSMEG_0229MSMEG_5476MSMEG_2372MSMEG_2373MSMEG_1290MSMEG_2374MSMEG_2372
MMAZ192952 MM0670MM0259MM0670MM1284MM0670MM0669MM0259MM0668MM0670
MMAR444158 MMARC6_0239MMARC6_0633MMARC6_0239MMARC6_1596MMARC6_0239MMARC6_0238MMARC6_0633MMARC6_0233MMARC6_0239
MMAR426368 MMARC7_1674MMARC7_1320MMARC7_1674MMARC7_0316MMARC7_1675MMARC7_1320MMARC7_1680MMARC7_1674
MMAR402880 MMARC5_0954MMARC5_1356MMARC5_0954MMARC5_0531MMARC5_0954MMARC5_0953MMARC5_1356MMARC5_0922MMARC5_0954
MMAR368407 MEMAR_1070MEMAR_0985MEMAR_1070MEMAR_1069MEMAR_1070MEMAR_1071MEMAR_0985MEMAR_2172MEMAR_1070
MMAR267377 MMP0650MMP0318MMP0650MMP1063MMP0650MMP0651MMP0318MMP0654MMP0650
MLAB410358 MLAB_0605MLAB_0613MLAB_0605MLAB_0603MLAB_0605MLAB_0606MLAB_0613MLAB_0605
MKAN190192 MK0531MK1197MK0531MK0391MK0531MK0545MK1197MK0832MK0531
MJAN243232 MJ_0277MJ_1276MJ_0277MJ_1195MJ_0277MJ_0161MJ_1276MJ_1543MJ_0277
MHUN323259 MHUN_1242MHUN_0139MHUN_1242MHUN_1243MHUN_1242MHUN_1241MHUN_0139MHUN_1245MHUN_1242
MGIL350054 MFLV_4239MFLV_0486MFLV_4239MFLV_4239MFLV_4238MFLV_5171MFLV_4237MFLV_4239
MEXT419610 MEXT_1209MEXT_1954MEXT_2674MEXT_4864MEXT_4866MEXT_2675MEXT_0285MEXT_4864
MCAP243233 MCA_2082MCA_2270MCA_2275MCA_2270MCA_2271MCA_2082MCA_2272MCA_2270
MBUR259564 MBUR_0710MBUR_2246MBUR_0710MBUR_0711MBUR_0710MBUR_0709MBUR_2246MBUR_0708MBUR_0710
MBAR269797 MBAR_A0218MBAR_A2069MBAR_A0218MBAR_A0942MBAR_A0218MBAR_A0219MBAR_A2069MBAR_A0220MBAR_A0218
MAQU351348 MAQU_3397MAQU_2116MAQU_0882MAQU_2477MAQU_0882MAQU_0883MAQU_2423MAQU_0884MAQU_2114
MAER449447 MAE_06010MAE_28670MAE_50700MAE_54460MAE_50700MAE_48120MAE_28670MAE_09700MAE_50700
MAEO419665 MAEO_0682MAEO_0680MAEO_0682MAEO_0849MAEO_0682MAEO_0683MAEO_0680MAEO_1175MAEO_0682
MACE188937 MA3792MA3373MA3792MA4615MA3792MA3791MA1802MA3790MA3792
MABS561007 MAB_3323CMAB_4545MAB_3323CMAB_3323CMAB_3322CMAB_4640CMAB_3321CMAB_3323C
LSPH444177 BSPH_3389BSPH_3390BSPH_3389BSPH_3386BSPH_3389BSPH_3388BSPH_3390BSPH_3389
LCHO395495 LCHO_2893LCHO_1490LCHO_1135LCHO_2888LCHO_2893LCHO_2892LCHO_2891LCHO_2893
KPNE272620 GKPORF_B4361GKPORF_B4361GKPORF_B4359GKPORF_B4361GKPORF_B4362GKPORF_B3614GKPORF_B3617GKPORF_B3431
HMOD498761 HM1_1514HM1_1511HM1_1979HM1_1515HM1_1979HM1_1512HM1_1511HM1_1513HM1_1514
HCHE349521 HCH_06858HCH_05916HCH_05908HCH_05916HCH_05915HCH_05854HCH_05914HCH_06858
HARS204773 HEAR0353HEAR0734HEAR0332HEAR1242HEAR1237HEAR1238HEAR0734HEAR1239
GVIO251221 GLR3279GLL3168GLR3279GLL2290GLR3279GLL1136GLL2657GLR3279
GURA351605 GURA_3720GURA_3721GURA_3720GURA_3715GURA_3720GURA_3719GURA_3721GURA_3718GURA_3720
GTHE420246 GTNG_0651GTNG_1931GTNG_2590GTNG_2587GTNG_2590GTNG_2589GTNG_1931GTNG_2588GTNG_2590
GSUL243231 GSU_1911GSU_1912GSU_1911GSU_1906GSU_1911GSU_1910GSU_1912GSU_1909GSU_1911
GMET269799 GMET_1260GMET_1259GMET_1260GMET_1265GMET_1260GMET_1261GMET_1259GMET_1262GMET_1260
GKAU235909 GK2046GK2661GK2658GK2661GK2660GK2046GK2659GK2661
ESP42895 ENT638_0624ENT638_0455ENT638_0624ENT638_0622ENT638_0624ENT638_0625ENT638_4012ENT638_4009ENT638_0025
EFER585054 EFER_0099EFER_0099EFER_0096EFER_0099EFER_0100EFER_3731EFER_3728EFER_3968
ECOO157 Z3637GCLLEUAILVIILVHILVDILVCILVG
ECOL83334 ECS3253ECS0568ECS0078ECS0081ECS0082ECS4705ECS4708ECS4702
ECOL585397 ECED1_2820ECED1_0528ECED1_0074ECED1_0079ECED1_0080ECED1_4457ECED1_4460ECED1_4454
ECOL585057 ECIAI39_2516ECIAI39_0081ECIAI39_0079ECIAI39_0081ECIAI39_0082ECIAI39_3015ECIAI39_3012ECIAI39_4273
ECOL585056 ECUMN_2702ECUMN_4896ECUMN_0548ECUMN_0076ECUMN_0078ECUMN_0079ECUMN_4297ECUMN_4300ECUMN_4294
ECOL585055 EC55989_2666EC55989_0522EC55989_0072EC55989_0074EC55989_0075EC55989_4243EC55989_4246EC55989_4240
ECOL585035 ECS88_2568ECS88_4908ECS88_0506ECS88_0079ECS88_0081ECS88_0082ECS88_4194ECS88_4197ECS88_4191
ECOL585034 ECIAI1_2438ECIAI1_0510ECIAI1_0075ECIAI1_0077ECIAI1_0078ECIAI1_3958ECIAI1_3961ECIAI1_3955
ECOL481805 ECOLC_1296ECOLC_3115ECOLC_3583ECOLC_3580ECOLC_3579ECOLC_4231ECOLC_4228ECOLC_4234
ECOL469008 ECBD_1299ECBD_3150ECBD_3542ECBD_3539ECBD_3538ECBD_4268ECBD_4265ECBD_0032
ECOL439855 ECSMS35_2523ECSMS35_0550ECSMS35_0079ECSMS35_0083ECSMS35_0084ECSMS35_4137ECSMS35_4140ECSMS35_4134
ECOL413997 ECB_02283ECB_00457ECB_00076ECB_00079ECB_00080ECB_03649ECB_03652ECB_03555
ECOL409438 ECSE_2670ECSE_0533ECSE_0074ECSE_0079ECSE_0080ECSE_4054ECSE_4057ECSE_4051
ECOL405955 APECO1_4163APECO1_1507APECO1_1909APECO1_1907APECO1_1906APECO1_2700APECO1_2697APECO1_2703
ECOL364106 UTI89_C2705UTI89_C5032UTI89_C0081UTI89_C0085UTI89_C0086UTI89_C4327UTI89_C4330UTI89_C4324
ECOL362663 ECP_2398ECP_0568ECP_0076ECP_0079ECP_0080ECP_3964ECP_3967ECP_3962
ECOL331111 ECE24377A_2661ECE24377A_0544ECE24377A_0077ECE24377A_0079ECE24377A_0080ECE24377A_4282ECE24377A_4285ECE24377A_4180
ECOL316407 ECK2369:JW2370:B2373ECK0270:JW0262:B0269ECK0500:JW0495:B0507ECK0076:JW0073:B0074ECK0079:JW0076:B0077ECK0080:JW0077:B0078ECK3763:JW5605:B3771ECK3766:JW3747:B3774ECK3662:JW3646:B3671
ECOL199310 C2909C0622C0091C0095C0096C4693C4696C4690
ECAR218491 ECA3848ECA3829ECA3831ECA3829ECA3828ECA4226ECA4221ECA3848
DVUL882 DVU_1376DVU_1376DVU_2981DVU_1376DVU_1377DVU_3373DVU_1378DVU_0360
DSP255470 CBDBA815CBDBA813CBDBA808CBDBA813CBDBA812CBDBA815CBDBA811CBDBA813
DSP216389 DEHABAV1_0752DEHABAV1_0753DEHABAV1_0752DEHABAV1_0749DEHABAV1_0752DEHABAV1_0751DEHABAV1_0753DEHABAV1_0750DEHABAV1_0752
DRED349161 DRED_0281DRED_0280DRED_0281DRED_0285DRED_0281DRED_0282DRED_0280DRED_0283DRED_0284
DHAF138119 DSY4166DSY1365DSY4166DSY1366DSY1367DSY1365DSY1368DSY1366
DETH243164 DET_0833DET_0834DET_0833DET_0830DET_0833DET_0832DET_0834DET_0831DET_0833
DDES207559 DDE_2168DDE_0116DDE_2168DDE_3218DDE_2168DDE_2167DDE_0116DDE_0398
DARO159087 DARO_3075DARO_1620DARO_3071DARO_3075DARO_3074DARO_0302DARO_3073DARO_1620
CPSY167879 CPS_3236CPS_2080CPS_4208CPS_3236CPS_3237CPS_4846CPS_4839CPS_4843
CPHY357809 CPHY_3347CPHY_3830CPHY_3171CPHY_3347CPHY_3021CPHY_3348CPHY_3020CPHY_3347
CMET456442 MBOO_1443MBOO_1203MBOO_1443MBOO_1442MBOO_1443MBOO_1444MBOO_1203MBOO_0481MBOO_1443
CKLU431943 CKL_1618CKL_1693CKL_2160CKL_1081CKL_1617CKL_1693CKL_1089CKL_1081
CJEJ407148 C8J_0536C8J_0012C8J_1625C8J_0536C8J_0537C8J_0012C8J_0591C8J_0536
CJEJ360109 JJD26997_1096JJD26997_0013JJD26997_2096JJD26997_1096JJD26997_1095JJD26997_0013JJD26997_1367JJD26997_1096
CJEJ354242 CJJ81176_0602CJJ81176_0039CJJ81176_0017CJJ81176_0602CJJ81176_0603CJJ81176_0039CJJ81176_0660CJJ81176_0602
CJEJ195099 CJE_0677CJE_0012CJE_1889CJE_0677CJE_0678CJE_0012CJE_0735CJE_0677
CJEJ192222 CJ0574CJ0013CJ1719CCJ0574CJ0575CJ0013CJ0632CJ0574
CHYD246194 CHY_0517CHY_0516CHY_0517CHY_0521CHY_0517CHY_0518CHY_0516CHY_0519CHY_0517
CHOM360107 CHAB381_1165CHAB381_1769CHAB381_1165CHAB381_0491CHAB381_1165CHAB381_1166CHAB381_1769CHAB381_0374CHAB381_1165
CGLU196627 CG1435CG1432CG1435CG1435CG1436CG1432CG1437CG1435
CEFF196164 CE1365CE2439CE1365CE1365CE1366CE1362CE1367CE1365
CDIP257309 DIP1098DIP1096DIP1098DIP1098DIP1099DIP1096DIP1100DIP1098
CDES477974 DAUD_0352DAUD_0540DAUD_0352DAUD_0355DAUD_0352DAUD_0353DAUD_0540DAUD_0354DAUD_0352
CCUR360105 CCV52592_1428CCV52592_2036CCV52592_1193CCV52592_1428CCV52592_1429CCV52592_2036CCV52592_1581CCV52592_1428
BWEI315730 BCERKBAB4_0770BCERKBAB4_1710BCERKBAB4_1319BCERKBAB4_1322BCERKBAB4_1707BCERKBAB4_1320BCERKBAB4_1710BCERKBAB4_1707
BTHU412694 BALH_0784BALH_1628BALH_1252BALH_1255BALH_1624BALH_1253BALH_1628BALH_1624
BTHU281309 BT9727_0771BT9727_1694BT9727_1691BT9727_1284BT9727_1691BT9727_1282BT9727_1694BT9727_1693BT9727_1691
BSUB BSU28310BSU21870BSU28310BSU28280BSU28310BSU28300BSU21870BSU28310
BSP376 BRADO4955BRADO4080BRADO4946BRADO5528BRADO5564BRADO5562BRADO2754BRADO5559BRADO5564
BPUM315750 BPUM_2472BPUM_1922BPUM_2472BPUM_2469BPUM_2472BPUM_2471BPUM_1922BPUM_2472
BLIC279010 BL00608BL05225BL00608BL00611BL00608BL00609BL05225BL00608
BJAP224911 BLL3157BLL4763BLR3166BLL6435BLL6503BLL6501BLL4536BLL6497BLL6503
BCLA66692 ABC2645ABC1110ABC2645ABC2642ABC2645ABC2644ABC2646ABC2643ABC2645
BCER572264 BCA_0923BCA_1859BCA_1452BCA_1455BCA_1856BCA_1453BCA_1859BCA_1856
BCER405917 BCE_0956BCE_1937BCE_1517BCE_1520BCE_1934BCE_1518BCE_1937BCE_1934
BCER315749 BCER98_1446BCER98_1120BCER98_1123BCER98_1120BCER98_1121BCER98_1446BCER98_1122BCER98_1120
BCER288681 BCE33L0772BCE33L1669BCE33L1282BCE33L1285BCE33L1666BCE33L1283BCE33L1669BCE33L1666
BCER226900 BC_0883BC_1780BC_1777BC_1400BC_1777BC_1398BC_1780BC_1779BC_1777
BANT592021 BAA_0972BAA_1922BAA_1919BAA_1487BAA_1919BAA_1485BAA_1922BAA_1919
BANT568206 BAMEG_3693BAMEG_2739BAMEG_2742BAMEG_3175BAMEG_2742BAMEG_3177BAMEG_2739BAMEG_2742
BANT261594 GBAA0866GBAA1853GBAA1850GBAA1420GBAA1850GBAA1418GBAA1853GBAA1850
BANT260799 BAS0823BAS1717BAS1714BAS1311BAS1714BAS1309BAS1717BAS1714
BAMY326423 RBAM_025370RBAM_020010RBAM_025370RBAM_025340RBAM_025370RBAM_025360RBAM_020010RBAM_025370
AVAR240292 AVA_2757AVA_0023AVA_2757AVA_2111AVA_2757AVA_2035AVA_0023AVA_0133AVA_2757
ASAL382245 ASA_4109ASA_3404ASA_3409ASA_3404ASA_3403ASA_0122ASA_4236ASA_0119
AMET293826 AMET_3400AMET_0502AMET_3458AMET_3400AMET_3403AMET_3534AMET_3402AMET_3418
AHYD196024 AHA_4204AHA_0887AHA_0882AHA_0887AHA_0889AHA_4202AHA_0153AHA_4204
AFUL224325 AF_2100AF_1014AF_1720AF_0219AF_1720AF_1719AF_1014AF_1985AF_1720
ACAU438753 AZC_0468AZC_1408AZC_3488AZC_3545AZC_2376AZC_2375AZC_3530AZC_2374AZC_2376
ABUT367737 ABU_1156ABU_2100ABU_0456ABU_1156ABU_1157ABU_2100ABU_0237ABU_1156
ABOR393595 ABO_0481ABO_0180ABO_0481ABO_0638ABO_0481ABO_0482ABO_2312ABO_0485
AAEO224324 AQ_451AQ_837AQ_451AQ_2090AQ_451AQ_1851AQ_837AQ_1245AQ_451


Organism features enriched in list (features available for 198 out of the 205 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Bubonic_plague 0.001458766
Disease:Dysentery 0.001458766
Disease:Food_poisoning 0.000053299
Disease:Gastroenteritis 0.00001651213
Endospores:Yes 0.00021993053
GC_Content_Range4:0-40 7.974e-844213
GC_Content_Range4:40-60 2.186e-12115224
GC_Content_Range4:60-100 0.009321339145
GC_Content_Range7:0-30 4.461e-7247
GC_Content_Range7:30-40 0.001498542166
GC_Content_Range7:40-50 0.000395355117
GC_Content_Range7:50-60 1.095e-760107
Genome_Size_Range5:0-2 2.022e-630155
Genome_Size_Range5:2-4 0.000034946197
Genome_Size_Range5:4-6 4.935e-16106184
Genome_Size_Range9:1-2 0.001324830128
Genome_Size_Range9:2-3 0.000087724120
Genome_Size_Range9:4-5 0.00002965096
Genome_Size_Range9:5-6 4.458e-105688
Habitat:Aquatic 4.014e-65091
Habitat:Host-associated 9.957e-1628206
Habitat:Multiple 0.001754975178
Habitat:Terrestrial 0.00740201731
Motility:No 0.002237438151
Motility:Yes 4.932e-8121267
Optimal_temp.:- 0.0038373101257
Oxygen_Req:Aerobic 1.429e-834185
Oxygen_Req:Anaerobic 0.005636745102
Oxygen_Req:Facultative 0.000056689201
Pathogenic_in:Human 0.005834160213
Pathogenic_in:No 0.000194596226
Shape:Coccus 0.00005281382
Shape:Irregular_coccus 0.00160611217
Shape:Rod 0.0003629136347



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 145
Effective number of orgs (counting one per cluster within 468 clusters): 101

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/271
TWHI203267 ncbi Tropheryma whipplei Twist1
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SMAR399550 ncbi Staphylothermus marinus F10
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PAST100379 Onion yellows phytoplasma0
PACN267747 ncbi Propionibacterium acnes KPA1712021
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
MXAN246197 ncbi Myxococcus xanthus DK 16220
MSYN262723 ncbi Mycoplasma synoviae 530
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MART243272 ncbi Mycoplasma arthritidis 158L3-10
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-001
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM1
ILOI283942 ncbi Idiomarina loihiensis L2TR0
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba1
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34181
FTUL401614 ncbi Francisella novicida U1121
FTUL393115 ncbi Francisella tularensis tularensis FSC1981
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FRANT ncbi Francisella tularensis tularensis SCHU S41
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250171
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CMUR243161 ncbi Chlamydia muridarum Nigg0
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6571
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBOT441771 ncbi Clostridium botulinum A str. Hall1
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193971
CBOT36826 Clostridium botulinum A1
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BQUI283165 ncbi Bartonella quintana Toulouse1
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5831
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K11
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0


Names of the homologs of the genes in the group in each of these orgs
  G7236   G6141   EG11583   EG11226   EG10500   EG10499   EG10496   EG10495   EG10494   
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
TWHI218496 TW0541
TWHI203267 TW204
TVOL273116
TPEN368408
TPAL243276
TLET416591
TKOD69014
TDEN243275
TACI273075
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SMAR399550
SAGA211110
SAGA208435
SAGA205921
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PPEN278197
PINT246198
PHOR70601
PGIN242619
PAST100379
PACN267747 PPA1372
OTSU357244
NSEN222891
MXAN246197
MSYN262723
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MHYO295358
MHYO262722
MHYO262719
MGEN243273
MFLO265311
MCAP340047
MART243272
LSAK314315
LREU557436 LREU_0494
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668
LJOH257314
LINT363253 LI0106
LHEL405566
LGAS324831 LGAS_0248
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LACI272621 LBA0396
ILOI283942
HSP64091
HSAL478009
HPYL85963 JHP0313
HPYL357544 HPAG1_0334
HPY HP0330
HDUC233412
HBUT415426
HACI382638 HAC_0990
FTUL458234
FTUL418136 FTW_1090
FTUL401614 FTN_1043
FTUL393115 FTF0640
FTUL393011
FTUL351581
FRANT ILVD
FPHI484022 FPHI_1547
FNUC190304
FNOD381764
FMAG334413
ERUM302409
ERUM254945
EFAE226185
ECHA205920
ECAN269484
DNOD246195
CTRA471473
CTRA471472
CTET212717
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380
CPER195103
CPER195102
CMUR243161
CFEL264202
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT536232 CLM_0349
CBOT515621 CLJ_B0345
CBOT498213 CLD_0459
CBOT441772 CLI_0364
CBOT441771 CLC_0350
CBOT441770 CLB_0335
CBOT36826 CBO0291
CABO218497
BTUR314724
BQUI283165 BQ08540
BHER314723
BGAR290434
BCIC186490
BBUR224326
BBAC360095 BARBAKC583_0917
BBAC264462
BAFZ390236
AYEL322098
AURANTIMONAS
APHA212042
APER272557 APE0013
AORE350688
AMAR234826
ALAI441768


Organism features enriched in list (features available for 135 out of the 145 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00410723192
Arrangment:Pairs 0.000884214112
Disease:Botulism 0.000628455
Disease:Legionnaire's_disease 0.002777644
Disease:None 0.0005221458
Disease:Pharyngitis 7.022e-688
Disease:Tularemia 0.000628455
Disease:Wide_range_of_infections 7.427e-81111
Disease:bronchitis_and_pneumonitis 7.022e-688
GC_Content_Range4:0-40 1.376e-2399213
GC_Content_Range4:40-60 0.000044733224
GC_Content_Range4:60-100 1.332e-153145
GC_Content_Range7:0-30 7.086e-133347
GC_Content_Range7:30-40 4.032e-966166
GC_Content_Range7:50-60 5.887e-77107
GC_Content_Range7:60-70 5.088e-143134
Genome_Size_Range5:0-2 2.973e-3796155
Genome_Size_Range5:2-4 0.004345834197
Genome_Size_Range5:4-6 2.338e-204184
Genome_Size_Range5:6-10 0.0000366147
Genome_Size_Range9:0-1 1.104e-82027
Genome_Size_Range9:1-2 5.847e-2576128
Genome_Size_Range9:4-5 4.672e-8496
Habitat:Aquatic 1.121e-6591
Habitat:Host-associated 1.910e-1587206
Habitat:Multiple 0.002646329178
Habitat:Terrestrial 0.0022164131
Motility:Yes 6.289e-640267
Optimal_temp.:37 7.541e-1050106
Pathogenic_in:Animal 0.00181672566
Pathogenic_in:Human 1.602e-979213
Pathogenic_in:No 2.026e-924226
Salinity:Non-halophilic 0.001767036106
Shape:Rod 0.006184969347
Shape:Sphere 2.361e-71519



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 75
Effective number of orgs (counting one per cluster within 468 clusters): 70

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
MKAN190192 ncbi Methanopyrus kandleri AV19 5.429e-92909
MAEO419665 ncbi Methanococcus aeolicus Nankai-3 2.575e-83449
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 2661 5.123e-83719
MTHE349307 ncbi Methanosaeta thermophila PT 9.929e-83999
MMAR267377 ncbi Methanococcus maripaludis S2 1.271e-74109
CMET456442 ncbi Candidatus Methanoregula boonei 6A8 1.300e-74119
MMAR402880 ncbi Methanococcus maripaludis C5 1.483e-74179
MMAR444158 ncbi Methanococcus maripaludis C6 1.617e-74219
MBUR259564 ncbi Methanococcoides burtonii DSM 6242 3.836e-74639
MMAR368407 ncbi Methanoculleus marisnigri JR1 5.423e-74819
MHUN323259 ncbi Methanospirillum hungatei JF-1 5.846e-74859
AFUL224325 ncbi Archaeoglobus fulgidus DSM 4304 7.165e-74969
PMAR59920 ncbi Prochlorococcus marinus NATL2A 1.523e-65399
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP1375 1.741e-65479
PMAR167555 ncbi Prochlorococcus marinus NATL1A 1.829e-65509
UMET351160 ncbi uncultured methanogenic archaeon RC-I 2.335e-65659
DETH243164 ncbi Dehalococcoides ethenogenes 195 2.694e-65749
DSP216389 ncbi Dehalococcoides sp. BAV1 3.200e-65859
MMAZ192952 ncbi Methanosarcina mazei Go1 4.025e-66009
MLAB410358 ncbi Methanocorpusculum labreanum Z 4.478e-63638
CHOM360107 ncbi Campylobacter hominis ATCC BAA-381 4.888e-66139
MBAR269797 ncbi Methanosarcina barkeri Fusaro 5.911e-66269
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H 6.880e-63838
MACE188937 ncbi Methanosarcina acetivorans C2A 8.665e-66539
MMAR426368 ncbi Methanococcus maripaludis C7 0.00001414198
SSP64471 ncbi Synechococcus sp. CC9311 0.00001997169
PMAR167546 ncbi Prochlorococcus marinus MIT 9301 0.00005334958
PMOB403833 ncbi Petrotoga mobilis SJ95 0.00005508019
MSTA339860 ncbi Methanosphaera stadtmanae DSM 3091 0.00005522997
NSP387092 ncbi Nitratiruptor sp. SB155-2 0.00005698049
AAEO224324 ncbi Aquifex aeolicus VF5 0.00005898079
PMAR93060 ncbi Prochlorococcus marinus MIT 9215 0.00006985128
SSP387093 ncbi Sulfurovum sp. NBC37-1 0.00011628709
WSUC273121 ncbi Wolinella succinogenes DSM 1740 0.00011998739
DSP255470 ncbi Dehalococcoides sp. CBDB1 0.00021825918
TERY203124 ncbi Trichodesmium erythraeum IMS101 0.00025019479
SSP321327 ncbi Synechococcus sp. JA-3-3Ab 0.00025749509
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C 0.00028569619
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen 0.00030509689
MAER449447 ncbi Microcystis aeruginosa NIES-843 0.00034729829
PMAR74547 ncbi Prochlorococcus marinus MIT 9313 0.00043116448
CJEJ195099 ncbi Campylobacter jejuni RM1221 0.00061086738
CJEJ360109 ncbi Campylobacter jejuni doylei 269.97 0.00062546758
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 11168 0.00072726888
STHE322159 ncbi Streptococcus thermophilus LMD-9 0.00079686968
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-176 0.00080586978
SSP84588 ncbi Synechococcus sp. WH 8102 0.00083377008
SSP1131 Synechococcus sp. CC9605 0.00083377008
CJEJ407148 ncbi Campylobacter jejuni jejuni 81116 0.00095357128
STHE299768 ncbi Streptococcus thermophilus CNRZ1066 0.00097487148
STHE264199 ncbi Streptococcus thermophilus LMG 18311 0.00100777178
PTHE370438 ncbi Pelotomaculum thermopropionicum SI 0.001139111209
MLEP272631 ncbi Mycobacterium leprae TN 0.00134014747
PMAR167540 Prochlorococcus marinus pastoris MED4ax 0.00150344827
CCUR360105 ncbi Campylobacter curvus 525.92 0.00159567608
PMAR167542 ncbi Prochlorococcus marinus MIT 9515 0.00165994897
PMAR146891 ncbi Prochlorococcus marinus AS9601 0.00168334907
HMOD498761 ncbi Heliobacterium modesticaldum Ice1 0.001984511919
PMAR74546 ncbi Prochlorococcus marinus MIT 9312 0.00207025057
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 13129 0.00232077978
NSP103690 ncbi Nostoc sp. PCC 7120 0.002358612149
TSP1755 Thermoanaerobacter sp. 0.003004912479
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-2901 0.003070812509
AVAR240292 ncbi Anabaena variabilis ATCC 29413 0.004080912909
ABUT367737 ncbi Arcobacter butzleri RM4018 0.00437888648
TELO197221 ncbi Thermosynechococcus elongatus BP-1 0.00479308748
MTHE264732 ncbi Moorella thermoacetica ATCC 39073 0.005091313229
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB 0.006069913489
CEFF196164 ncbi Corynebacterium efficiens YS-314 0.00692769168
DRED349161 ncbi Desulfotomaculum reducens MI-1 0.007118113729
CGLU196627 ncbi Corynebacterium glutamicum ATCC 13032 0.00862709428
SELO269084 ncbi Synechococcus elongatus PCC 6301 0.00862709428
OCAR504832 ncbi Oligotropha carboxidovorans OM5 0.008992814089
SSP1148 ncbi Synechocystis sp. PCC 6803 0.00952639548
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13) 0.00984369588


Names of the homologs of the genes in the group in each of these orgs
  G7236   G6141   EG11583   EG11226   EG10500   EG10499   EG10496   EG10495   EG10494   
MKAN190192 MK0531MK1197MK0531MK0391MK0531MK0545MK1197MK0832MK0531
MAEO419665 MAEO_0682MAEO_0680MAEO_0682MAEO_0849MAEO_0682MAEO_0683MAEO_0680MAEO_1175MAEO_0682
MJAN243232 MJ_0277MJ_1276MJ_0277MJ_1195MJ_0277MJ_0161MJ_1276MJ_1543MJ_0277
MTHE349307 MTHE_0110MTHE_0673MTHE_0110MTHE_1298MTHE_0110MTHE_0111MTHE_0673MTHE_0112MTHE_0110
MMAR267377 MMP0650MMP0318MMP0650MMP1063MMP0650MMP0651MMP0318MMP0654MMP0650
CMET456442 MBOO_1443MBOO_1203MBOO_1443MBOO_1442MBOO_1443MBOO_1444MBOO_1203MBOO_0481MBOO_1443
MMAR402880 MMARC5_0954MMARC5_1356MMARC5_0954MMARC5_0531MMARC5_0954MMARC5_0953MMARC5_1356MMARC5_0922MMARC5_0954
MMAR444158 MMARC6_0239MMARC6_0633MMARC6_0239MMARC6_1596MMARC6_0239MMARC6_0238MMARC6_0633MMARC6_0233MMARC6_0239
MBUR259564 MBUR_0710MBUR_2246MBUR_0710MBUR_0711MBUR_0710MBUR_0709MBUR_2246MBUR_0708MBUR_0710
MMAR368407 MEMAR_1070MEMAR_0985MEMAR_1070MEMAR_1069MEMAR_1070MEMAR_1071MEMAR_0985MEMAR_2172MEMAR_1070
MHUN323259 MHUN_1242MHUN_0139MHUN_1242MHUN_1243MHUN_1242MHUN_1241MHUN_0139MHUN_1245MHUN_1242
AFUL224325 AF_2100AF_1014AF_1720AF_0219AF_1720AF_1719AF_1014AF_1985AF_1720
PMAR59920 PMN2A_1858PMN2A_0180PMN2A_1858PMN2A_0686PMN2A_1858PMN2A_0764PMN2A_0180PMN2A_0881PMN2A_1858
PMAR167539 PRO_0526PRO_0847PRO_0526PRO_1134PRO_0526PRO_1251PRO_0847PRO_1389PRO_0526
PMAR167555 NATL1_05831NATL1_08121NATL1_05831NATL1_15201NATL1_05831NATL1_16041NATL1_08121NATL1_17361NATL1_05831
UMET351160 LRC534RCIX238LRC534RCIX673LRC534LRC533RCIX1841LRC519LRC534
DETH243164 DET_0833DET_0834DET_0833DET_0830DET_0833DET_0832DET_0834DET_0831DET_0833
DSP216389 DEHABAV1_0752DEHABAV1_0753DEHABAV1_0752DEHABAV1_0749DEHABAV1_0752DEHABAV1_0751DEHABAV1_0753DEHABAV1_0750DEHABAV1_0752
MMAZ192952 MM0670MM0259MM0670MM1284MM0670MM0669MM0259MM0668MM0670
MLAB410358 MLAB_0605MLAB_0613MLAB_0605MLAB_0603MLAB_0605MLAB_0606MLAB_0613MLAB_0605
CHOM360107 CHAB381_1165CHAB381_1769CHAB381_1165CHAB381_0491CHAB381_1165CHAB381_1166CHAB381_1769CHAB381_0374CHAB381_1165
MBAR269797 MBAR_A0218MBAR_A2069MBAR_A0218MBAR_A0942MBAR_A0218MBAR_A0219MBAR_A2069MBAR_A0220MBAR_A0218
MTHE187420 MTH1444MTH1449MTH1444MTH1481MTH1444MTH1443MTH1442MTH1444
MACE188937 MA3792MA3373MA3792MA4615MA3792MA3791MA1802MA3790MA3792
MMAR426368 MMARC7_1674MMARC7_1320MMARC7_1674MMARC7_0316MMARC7_1675MMARC7_1320MMARC7_1680MMARC7_1674
SSP64471 GSYN2129GSYN1809GSYN2129GSYN1052GSYN2129GSYN0962GSYN1809GSYN0766GSYN2129
PMAR167546 P9301ORF_0565P9301ORF_0850P9301ORF_1193P9301ORF_0565P9301ORF_1367P9301ORF_0850P9301ORF_1528P9301ORF_0565
PMOB403833 PMOB_1592PMOB_1593PMOB_1592PMOB_1589PMOB_1592PMOB_1591PMOB_1593PMOB_1590PMOB_1592
MSTA339860 MSP_0026MSP_1576MSP_0029MSP_0199MSP_0028MSP_1576MSP_0022
NSP387092 NIS_0810NIS_0126NIS_0810NIS_1407NIS_0810NIS_0811NIS_0126NIS_1161NIS_0810
AAEO224324 AQ_451AQ_837AQ_451AQ_2090AQ_451AQ_1851AQ_837AQ_1245AQ_451
PMAR93060 P9215_06071P9215_08681P9215_12011P9215_06071P9215_13601P9215_08681P9215_15441P9215_06071
SSP387093 SUN_1823SUN_2427SUN_1823SUN_1956SUN_1823SUN_1822SUN_2427SUN_0443SUN_1823
WSUC273121 WS0103WS0130WS0103WS0624WS0103WS0102WS0130WS1878WS0103
DSP255470 CBDBA815CBDBA813CBDBA808CBDBA813CBDBA812CBDBA815CBDBA811CBDBA813
TERY203124 TERY_2843TERY_0019TERY_2843TERY_2253TERY_2843TERY_1850TERY_0019TERY_4335TERY_2843
SSP321327 CYA_2073CYA_1697CYA_2073CYA_2223CYA_2073CYA_2130CYA_1697CYA_0246CYA_2073
CDES477974 DAUD_0352DAUD_0540DAUD_0352DAUD_0355DAUD_0352DAUD_0353DAUD_0540DAUD_0354DAUD_0352
SWOL335541 SWOL_2146SWOL_2147SWOL_2146SWOL_2143SWOL_2146SWOL_2145SWOL_2147SWOL_2144SWOL_2146
MAER449447 MAE_06010MAE_28670MAE_50700MAE_54460MAE_50700MAE_48120MAE_28670MAE_09700MAE_50700
PMAR74547 PMT1239PMT0560PMT1239PMT1121PMT1239PMT1176PMT0313PMT1239
CJEJ195099 CJE_0677CJE_0012CJE_1889CJE_0677CJE_0678CJE_0012CJE_0735CJE_0677
CJEJ360109 JJD26997_1096JJD26997_0013JJD26997_2096JJD26997_1096JJD26997_1095JJD26997_0013JJD26997_1367JJD26997_1096
CJEJ192222 CJ0574CJ0013CJ1719CCJ0574CJ0575CJ0013CJ0632CJ0574
STHE322159 STER_1850STER_1851STER_1850STER_1171STER_1850STER_1849STER_1851STER_1848
CJEJ354242 CJJ81176_0602CJJ81176_0039CJJ81176_0017CJJ81176_0602CJJ81176_0603CJJ81176_0039CJJ81176_0660CJJ81176_0602
SSP84588 SYNW1746OR2980SYNW1123OR3467SYNW0730OR1620SYNW1746OR2980SYNW0680OR1970SYNW1123OR3467SYNW1650OR0554SYNW1746OR2980
SSP1131 SYNCC9605_0717SYNCC9605_1260SYNCC9605_0717SYNCC9605_1939SYNCC9605_1989SYNCC9605_1260SYNCC9605_0839SYNCC9605_0717
CJEJ407148 C8J_0536C8J_0012C8J_1625C8J_0536C8J_0537C8J_0012C8J_0591C8J_0536
STHE299768 STR1873STR1874STR1873STR1203STR1873STR1872STR1874STR1871
STHE264199 STU1873STU1874STU1873STU1203STU1873STU1872STU1874STU1871
PTHE370438 PTH_0527PTH_0526PTH_0530PTH_0531PTH_0527PTH_0528PTH_0526PTH_0529PTH_0527
MLEP272631 ML2083ML2608ML1696ML1696ML1695ML1694ML1696
PMAR167540 PMM0774PMM1066PMM0526PMM1154PMM0774PMM1315PMM0526
CCUR360105 CCV52592_1428CCV52592_2036CCV52592_1193CCV52592_1428CCV52592_1429CCV52592_2036CCV52592_1581CCV52592_1428
PMAR167542 P9515ORF_0850P9515ORF_1208P9515ORF_0626P9515ORF_1381P9515ORF_0850P9515ORF_1543P9515ORF_0626
PMAR146891 A9601_08361A9601_11711A9601_05821A9601_13311A9601_08361A9601_15141A9601_05821
HMOD498761 HM1_1514HM1_1511HM1_1979HM1_1515HM1_1979HM1_1512HM1_1511HM1_1513HM1_1514
PMAR74546 PMT9312_0782PMT9312_1077PMT9312_0526PMT9312_1253PMT9312_0782PMT9312_1412PMT9312_0526
CDIP257309 DIP1098DIP1096DIP1098DIP1098DIP1099DIP1096DIP1100DIP1098
NSP103690 ALL4613ALR2771ALL4613ALR4840ALL4613ALR4627ALR2771ALL2315ALL4613
TSP1755 TETH514_0019TETH514_0018TETH514_0019TETH514_0014TETH514_0019TETH514_0012TETH514_0018TETH514_0013TETH514_0019
CHYD246194 CHY_0517CHY_0516CHY_0517CHY_0521CHY_0517CHY_0518CHY_0516CHY_0519CHY_0517
AVAR240292 AVA_2757AVA_0023AVA_2757AVA_2111AVA_2757AVA_2035AVA_0023AVA_0133AVA_2757
ABUT367737 ABU_1156ABU_2100ABU_0456ABU_1156ABU_1157ABU_2100ABU_0237ABU_1156
TELO197221 TLR1296TLL1057TLR1296TLL1397TLR1296TLL0880TLL1057TLR1296
MTHE264732 MOTH_2258MOTH_2259MOTH_2258MOTH_2255MOTH_2258MOTH_2257MOTH_2259MOTH_1350MOTH_2258
SFUM335543 SFUM_0296SFUM_0356SFUM_3024SFUM_0306SFUM_3024SFUM_3025SFUM_0356SFUM_3026SFUM_3023
CEFF196164 CE1365CE2439CE1365CE1365CE1366CE1362CE1367CE1365
DRED349161 DRED_0281DRED_0280DRED_0281DRED_0285DRED_0281DRED_0282DRED_0280DRED_0283DRED_0284
CGLU196627 CG1435CG1432CG1435CG1435CG1436CG1432CG1437CG1435
SELO269084 SYC1366_CSYC1366_CSYC0145_DSYC1366_CSYC1672_CSYC0898_CSYC0010_CSYC1366_C
OCAR504832 OCAR_6551OCAR_6278OCAR_6562OCAR_5296OCAR_5290OCAR_5291OCAR_4462OCAR_5292OCAR_5290
SSP1148 SLR2088SLR0452SLR2088SLR0186SLR2088SLL0065SLR0452SLR2088
SSP321332 CYB_0648CYB_1987CYB_0648CYB_1442CYB_0648CYB_0971CYB_1987CYB_0648


Organism features enriched in list (features available for 72 out of the 75 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.000171469
Endospores:No 0.003821336211
GC_Content_Range4:40-60 0.005870337224
GC_Content_Range4:60-100 0.00011786145
GC_Content_Range7:60-70 0.00042716134
Genome_Size_Range5:0-2 0.000030834155
Genome_Size_Range5:4-6 1.041e-75184
Genome_Size_Range9:1-2 2.095e-734128
Genome_Size_Range9:4-5 0.0006446396
Genome_Size_Range9:5-6 0.0003526288
Gram_Stain:Gram_Neg 0.000068426333
Habitat:Aquatic 6.029e-93091
Habitat:Host-associated 2.063e-86206
Optimal_temp.:35-40 0.001815233
Oxygen_Req:Aerobic 0.00001188185
Oxygen_Req:Anaerobic 2.067e-1034102
Oxygen_Req:Facultative 4.613e-86201
Oxygen_Req:Microaerophilic 0.0028319718
Pathogenic_in:Animal 0.0010097166
Pathogenic_in:Human 4.502e-610213
Pathogenic_in:No 1.386e-850226
Shape:Irregular_coccus 1.896e-81217
Shape:Oval 0.000952945
Shape:Rod 9.874e-1019347
Temp._range:Mesophilic 0.001887649473
Temp._range:Thermophilic 0.00032921235



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6141   EG11583   EG11226   EG10500   EG10499   EG10496   EG10495   EG10494   
G72360.998940.9998670.9991370.9999080.9998690.9990790.9996210.99984
G61410.9991560.9985490.999180.999040.9998970.9988770.999423
EG115830.9995050.9999670.999950.998850.9996840.999872
EG112260.9996520.9997320.9986670.9995680.999398
EG1050010.9990120.9998930.999972
EG104990.998820.9999480.999938
EG104960.9992970.999539
EG104950.999824
EG10494



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PAIRWISE BLAST SCORES:

  G7236   G6141   EG11583   EG11226   EG10500   EG10499   EG10496   EG10495   EG10494   
G72360.0f0---2.6e-43----
G6141-0.0f0-------
EG11583--0.0f0-2.4e-79----
EG11226---0.0f0-----
EG10500----0.0f0----
EG10499-----0.0f0---
EG10496------0.0f0--
EG10495-------0.0f0-
EG10494--------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis) (degree of match pw to cand: 0.375, degree of match cand to pw: 0.667, average score: 0.935)
  Genes in pathway or complex:
             0.9979 0.9957 EG11575 (leuD) LEUD-MONOMER (LeuD)
             0.9979 0.9955 EG11576 (leuC) LEUC-MONOMER (LeuC)
   *in cand* 0.9994 0.9985 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
             0.5997 0.2296 EG11040 (tyrB) TYRB-MONOMER (TyrB)
             0.9988 0.9981 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
             0.9809 0.9323 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
             0.8274 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
             0.9995 0.9984 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9998 0.9994 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9997 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9997 0.9990 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
   *in cand* 0.9996 0.9989 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
             0.9964 0.9920 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
   *in cand* 0.9992 0.9987 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9992 0.9985 G6141 (yagF) G6141-MONOMER (CP4-6 prophage; predicted dehydratase)
   *in cand* 0.9996 0.9989 G7236 (oxc) G7236-MONOMER (oxalyl-CoA decarboxylase)

- THREOCAT-PWY (superpathway of threonine metabolism) (degree of match pw to cand: 0.208, degree of match cand to pw: 0.556, average score: 0.637)
  Genes in pathway or complex:
             0.5033 0.2991 M014 (mhpF) MHPF-MONOMER (acetaldehyde dehydrogenase 2)
             0.2489 0.0533 EG10031 (adhE) ADHE-MONOMER (AdhE)
             0.4464 0.1857 G6455 (ltaE) LTAA-MONOMER (LtaA)
             0.6316 0.1618 EG13139 (tynA) AMINEOXID-MONOMER (TynA)
             0.7094 0.3292 EG10512 (kbl) AKBLIG-MONOMER (Kbl)
             0.5911 0.1589 EG10027 (ackA) ACETATEKINA-MONOMER (propionate kinase / acetate kinase)
             0.6053 0.0912 EG11172 (tdcD) PROPKIN-MONOMER (propionate kinase)
             0.4287 0.0033 EG20173 (pta) PHOSACETYLTRANS-MONOMER (Pta)
             0.3476 0.1298 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
             0.3663 0.1241 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
             0.9846 0.9407 EG10990 (tdcB) THREDEHYDCAT-MONOMER (TdcB)
             0.9809 0.9323 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
             0.8274 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
             0.9995 0.9984 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9998 0.9994 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9997 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9997 0.9990 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
   *in cand* 0.9996 0.9989 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
             0.9964 0.9920 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
   *in cand* 0.9992 0.9987 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.7575 0.4952 EG11904 (gldA) GLYCDEH-MONOMER (GldA)
             0.8713 0.5870 EG10993 (tdh) THREODEHYD-MONOMER (Tdh)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9985 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9997 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9992 0.9985 G6141 (yagF) G6141-MONOMER (CP4-6 prophage; predicted dehydratase)
   *in cand* 0.9996 0.9989 G7236 (oxc) G7236-MONOMER (oxalyl-CoA decarboxylase)

- VALSYN-PWY (valine biosynthesis) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.556, average score: 0.972)
  Genes in pathway or complex:
   *in cand* 0.9992 0.9987 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.9964 0.9920 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
   *in cand* 0.9996 0.9989 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
             0.9995 0.9984 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9998 0.9994 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
             0.8274 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
   *in cand* 0.9997 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9997 0.9990 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9985 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9997 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9992 0.9985 G6141 (yagF) G6141-MONOMER (CP4-6 prophage; predicted dehydratase)
   *in cand* 0.9996 0.9989 G7236 (oxc) G7236-MONOMER (oxalyl-CoA decarboxylase)

- ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.222, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9997 0.9990 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9994 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9996 0.9989 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
   *in cand* 0.9992 0.9987 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
   *in cand* 0.9994 0.9985 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9997 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9992 0.9985 G6141 (yagF) G6141-MONOMER (CP4-6 prophage; predicted dehydratase)
   *in cand* 0.9996 0.9989 G7236 (oxc) G7236-MONOMER (oxalyl-CoA decarboxylase)

- ILEUSYN-PWY (isoleucine biosynthesis I (from threonine)) (degree of match pw to cand: 0.455, degree of match cand to pw: 0.556, average score: 0.973)
  Genes in pathway or complex:
   *in cand* 0.9992 0.9987 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.9964 0.9920 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
   *in cand* 0.9996 0.9989 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
   *in cand* 0.9997 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9997 0.9990 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
             0.9995 0.9984 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9998 0.9994 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
             0.8274 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
             0.9809 0.9323 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9985 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9997 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9992 0.9985 G6141 (yagF) G6141-MONOMER (CP4-6 prophage; predicted dehydratase)
   *in cand* 0.9996 0.9989 G7236 (oxc) G7236-MONOMER (oxalyl-CoA decarboxylase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10499 EG10500 (centered at EG10499)
EG10494 (centered at EG10494)
EG10495 (centered at EG10495)
EG10496 (centered at EG10496)
EG11226 (centered at EG11226)
EG11583 (centered at EG11583)
G6141 (centered at G6141)
G7236 (centered at G7236)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7236   G6141   EG11583   EG11226   EG10500   EG10499   EG10496   EG10495   EG10494   
300/623347/623322/623373/623387/623410/623401/623417/623344/623
AAEO224324:0:Tyes02610114809812615460
AAUR290340:2:Tyes209921003083-2099209802097-
AAVE397945:0:Tyes-731-15771581158001579-
ABAC204669:0:Tyes-191-0-189191188190
ABAU360910:0:Tyes2357-2357-2357235602355-
ABOR393595:0:Tyes31003104693103112173314-
ABUT367737:0:Tyes9171859-21991791818590917
ACAU438753:0:Tyes09523055311319351934309819331935
ACEL351607:0:Tyes-01-12--1
ACRY349163:8:Tyes-19456210231123105142034-
ADEH290397:0:Tyes-215414102154-1
AEHR187272:0:Tyes-1128-133-1250126-
AFER243159:0:Tyes-886-017601759184317581760
AFUL224325:0:Tyes1855784148201482148178417391482
AHYD196024:0:Tyes3906-713708713715390403906
AMAR329726:9:Tyes235524132355023551397--2355
AMET293826:0:Tyes28360-289428362839296828382854
ANAE240017:0:Tyes-1404---014041-
APER272557:0:Tyes-0-------
APLE416269:0:Tyes--63029863063101803-
APLE434271:0:Tno--598307598599018192
ASAL382245:5:Tyes-38513159316431593158339730
ASP1667:3:Tyes231161-2130-
ASP232721:2:Tyes6670-6726676681669-
ASP62928:0:Tyes---25762568256902570419
ASP62977:0:Tyes16922176--1692169101690-
ASP76114:2:Tyes-0-38793865386676138672494
AVAR240292:3:Tyes27460274621012746202501102746
BABO262698:1:Tno--1229-12291228012201229
BAMB339670:2:Tno------0--
BAMB339670:3:Tno-7200504509508-507-
BAMB398577:2:Tno------0--
BAMB398577:3:Tno-6080403408407-406-
BAMY326423:0:Tyes53505355325355340-535
BANT260799:0:Tno0884881482881480884-881
BANT261594:2:Tno0891888497888495891-888
BANT568206:2:Tyes9390342534270-3
BANT592021:2:Tno0935932511932509935-932
BAPH198804:0:Tyes1-1-10356355-
BAPH372461:0:Tyes----10248247-
BBAC360095:0:Tyes-------0-
BBRO257310:0:Tyes-38273486-4582348503484-
BCAN483179:1:Tno--1274-12741273012641274
BCEN331271:0:Tno--0------
BCEN331271:1:Tno------0--
BCEN331271:2:Tno-205-065-4-
BCEN331272:2:Tyes------0--
BCEN331272:3:Tyes-5830381387386-385-
BCER226900:1:Tyes0886884513884511886885884
BCER288681:0:Tno0889506509886507889-886
BCER315749:1:Tyes-319030131920
BCER405917:1:Tyes0925524527922525925-922
BCER572264:1:Tno0922526529919527922-919
BCLA66692:0:Tyes156501565156215651564156615631565
BFRA272559:1:Tyes279--0--280--
BFRA295405:0:Tno322--0--323--
BHAL272558:0:Tyes-4-0-241-
BHEN283166:0:Tyes----934-0931934
BJAP224911:0:Fyes016139330033683366138533623368
BLIC279010:0:Tyes61806186156186170-618
BLON206672:0:Tyes-----01496229-
BMAL243160:1:Tno-01022-10221021-1020-
BMAL320388:1:Tno-11910501-2-
BMAL320389:1:Tyes-12210501-2-
BMEL224914:1:Tno--0-01125470
BMEL359391:1:Tno--1188-11881187011791188
BOVI236:1:Tyes--1115-11151114011071115
BPAR257311:0:Tno-31932857-3782285602855-
BPER257313:0:Tyes-2488438-4384390440-
BPET94624:0:Tyes-0937-9379383886939-
BPSE272560:1:Tyes-0492229224225-226-
BPSE320372:1:Tno-01373270264265-266-
BPSE320373:1:Tno-01201254249250-251-
BPUM315750:0:Tyes54505455425455440-545
BQUI283165:0:Tyes-------0-
BSP107806:1:Tyes---0-----
BSP107806:2:Tyes1-1-10369368-
BSP36773:1:Tyes------0--
BSP36773:2:Tyes-6340426431430-429-
BSP376:0:Tyes209912702092264726822680026772682
BSUB:0:Tyes66606666636666650-666
BSUI204722:1:Tyes--1247-12471246012381247
BSUI470137:1:Tno--1295-12951294012861295
BTHA271848:1:Tno-01314222217218-219-
BTHE226186:0:Tyes223--0--224--
BTHU281309:1:Tno0911908503908501911910908
BTHU412694:1:Tno0797443446794444797-794
BTRI382640:1:Tyes----1305-012981305
BVIE269482:6:Tyes-0----841--
BVIE269482:7:Tyes--0537542541-540-
BWEI315730:4:Tyes0921538541918539921-918
BXEN266265:1:Tyes096----96--
CACE272562:1:Tyes0442---71-0
CAULO:0:Tyes--56305635641524583563
CBEI290402:0:Tyes53837---0128462399
CBLO203907:0:Tyes---0--453451456
CBLO291272:0:Tno---0--465463468
CBOT36826:1:Tno-0-------
CBOT441770:0:Tyes-0-------
CBOT441771:0:Tno-0-------
CBOT441772:1:Tno-0-------
CBOT498213:1:Tno-0-------
CBOT508765:1:Tyes-4---04-369
CBOT515621:2:Tyes-0-------
CBOT536232:0:Tno-0-------
CCHL340177:0:Tyes-43-31403
CCON360104:2:Tyes01122-58201-4570
CCUR360105:0:Tyes9560-4329569570720956
CDES477974:0:Tyes0172030117220
CDIF272563:1:Tyes1463----4630-
CDIP257309:0:Tyes202-23042
CEFF196164:0:Fyes311083-34053
CFET360106:0:Tyes0914-51701-3090
CGLU196627:0:Tyes303-34053
CHOM360107:1:Tyes774135077411177477513500774
CHUT269798:0:Tyes-2558-2554---0-
CHYD246194:0:Tyes101512031
CJAP155077:0:Tyes184-184-1841850188-
CJEI306537:0:Tyes2-2-21602
CJEJ192222:0:Tyes5410-16625415420599541
CJEJ195099:0:Tno6480-18186486490705648
CJEJ354242:2:Tyes5360-16115365370592536
CJEJ360109:0:Tyes10130-194210131012012631013
CJEJ407148:0:Tno5420-16635425430597542
CKLU431943:1:Tyes537612-1072053661280
CKOR374847:0:Tyes-705-0--705440-
CMAQ397948:0:Tyes0598-1-----
CMET456442:0:Tyes9857379859849859867370985
CMIC31964:2:Tyes-01-120-1
CMIC443906:2:Tyes-01-120-1
CNOV386415:0:Tyes5410----539--
CPEL335992:0:Tyes-964213842--0-
CPHY357809:0:Tyes323803-14932313240323
CPSY167879:0:Tyes11190-205111191120267826712675
CRUT413404:0:Tyes-800401-20
CSAL290398:0:Tyes432209--01-3-
CSP501479:7:Fyes-367-0--386--
CSP501479:8:Fyes--0-01--0
CSP78:2:Tyes-1662-018851887-19151885
CSUL444179:0:Tyes-221-0-----
CTEP194439:0:Tyes-32-21302
CVES412965:0:Tyes-74-401-20
CVIO243365:0:Tyes-0-4614524531164454-
DARO159087:0:Tyes2799-1340279527992798027971340
DDES207559:0:Tyes2084020843152208420830-284
DETH243164:0:Tyes343032413
DGEO319795:0:Tyes--0------
DGEO319795:1:Tyes-635-0-2--3
DHAF138119:0:Tyes283502835-12031
DOLE96561:0:Tyes0719720724720721719--
DPSY177439:2:Tyes2103-2103-2103210417902103
DRAD243230:3:Tyes---344--0-377
DRED349161:0:Tyes101512034
DSHI398580:5:Tyes-0-477167716790--
DSP216389:0:Tyes343032413
DSP255470:0:Tno-43032413
DVUL882:1:Tyes1011-1011260710111012299710130
ECAR218491:0:Tyes21-131041240721
ECOL199310:0:Tno2747-512056450745104504
ECOL316407:0:Tno2313191424034342234193522
ECOL331111:6:Tno2480-446023403740403940
ECOL362663:0:Tno2311-487034387738803875
ECOL364106:1:Tno2620-4928045422942324226
ECOL405955:2:Tyes2276-406023374237453739
ECOL409438:6:Tyes2637-467056405740604054
ECOL413997:0:Tno2209-386034359736003499
ECOL439855:4:Tno2383-457045392939323926
ECOL469008:0:Tno1284-3102350234993498423842350
ECOL481805:0:Tno0-1814228322802279294529422948
ECOL585034:0:Tno2339-431045383138343828
ECOL585035:0:Tno24014647418034398039833977
ECOL585055:0:Tno2568-446045411941224116
ECOL585056:2:Tno26364806475035422542284222
ECOL585057:0:Tno2431-4045294029374196
ECOL585397:0:Tno2651-432045425542584252
ECOL83334:0:Tno3240-499034473547384732
ECOLI:0:Tno2348195434034376737703665
ECOO157:0:Tno3245-495034475347564750
EFER585054:1:Tyes3-3034361236093829
ELIT314225:0:Tyes-284--21-02
ESP42895:1:Tyes611439611609611612403240290
FALN326424:0:Tyes--2-2197202
FJOH376686:0:Tyes-3-5--35502
FPHI484022:1:Tyes-0-------
FRANT:0:Tno-0-------
FSP106370:0:Tyes--2-2189002
FSP1855:0:Tyes-61190-01611920
FSUC59374:0:Tyes0--2747311431136906303114
FTUL393115:0:Tyes-0-------
FTUL401614:0:Tyes-0-------
FTUL418136:0:Tno-0-------
GBET391165:0:Tyes---0984666-
GFOR411154:0:Tyes1718170---1517
GKAU235909:1:Tyes-06226196226210620622
GMET269799:1:Tyes101612031
GOXY290633:5:Tyes---6370113952-
GSUL243231:0:Tyes565054635
GTHE420246:1:Tyes012551904190119041903125519021904
GURA351605:0:Tyes565054635
GVIO251221:0:Tyes217220582172117021720-15422172
HACI382638:1:Tyes-------0-
HARS204773:0:Tyes203710857852853371854-
HAUR316274:2:Tyes-430324-3
HCHE349521:0:Tyes983-65546564063983
HHAL349124:0:Tyes-0-517-521-520-
HHEP235279:0:Tyes-0--1413036714
HINF281310:0:Tyes585-585321585586840-
HINF374930:0:Tyes1-126210514561-
HINF71421:0:Tno886-886302886885550-
HMAR272569:8:Tyes-0-1262-24-2523
HMOD498761:0:Tyes3046644661023
HMUK485914:1:Tyes2881316-0-2636-2637-
HNEP81032:0:Tyes---0119959-11
HPY:0:Tno-------0-
HPYL357544:1:Tyes-------0-
HPYL85963:0:Tno-------0-
HSOM205914:1:Tyes---249--19715230
HSOM228400:0:Tno---717--20418410
HWAL362976:1:Tyes1364--0-13651678--
IHOS453591:0:Tyes-357-380--3570-
JSP290400:1:Tyes-0-362318501846--1850
JSP375286:0:Tyes20-0179718021801-1800-
KPNE272620:2:Tyes892-8928908928931721750
KRAD266940:2:Fyes577578577--5760-577
LACI272621:0:Tyes0--------
LBIF355278:2:Tyes-2518-1099-1592-01593
LBIF456481:2:Tno-2609-1128-1638-01639
LBOR355276:1:Tyes-768-1302-8917680890
LBOR355277:1:Tno-875-246-187516400
LCHO395495:0:Tyes17833550177817831782-17811783
LGAS324831:0:Tyes0--------
LINN272626:1:Tno-0-4120-1
LINT189518:1:Tyes-761-03723717612058372
LINT267671:1:Tno-0-612302303022481629
LINT363253:3:Tyes0--------
LLAC272622:5:Tyes-32132--02
LLAC272623:0:Tyes-0---2-3-
LMES203120:1:Tyes282-74--820-
LMON169963:0:Tno-0-4120-1
LMON265669:0:Tyes-0-4120-1
LREU557436:0:Tyes0--------
LSPH444177:1:Tyes3430324-3
LWEL386043:0:Tyes-0-4120-1
LXYL281090:0:Tyes-21-102--
MABS561007:1:Tyes212242-21131902
MACE188937:0:Tyes193015301930274119301929019281930
MAEO419665:0:Tyes2021672304882
MAER449447:0:Tyes02284450648844506424422843694506
MAQU351348:2:Tyes249012170157401152021215
MAVI243243:0:Tyes1326----111260-
MBAR269797:1:Tyes01832072501183220
MBOV233413:0:Tno0-2938-293829377229362938
MBOV410289:0:Tno0-2892-289228917028902892
MBUR259564:0:Tyes214602321146002
MCAP243233:0:Tyes-01761801761770178176
MEXT419610:0:Tyes9321684-240345904592240404590
MFLA265072:0:Tyes---1761775177601777-
MGIL350054:3:Tyes377603776-37763775471037743776
MHUN323259:0:Tyes109001090109110901089010931090
MJAN243232:2:Tyes12111431211060121011431421121
MKAN190192:0:Tyes1438181430143157818452143
MLAB410358:0:Tyes210202310-2
MLEP272631:0:Tyes2335262-21-02
MLOT266835:2:Tyes-6810-9449433987923944
MMAG342108:0:Tyes--9719769719720973971
MMAR267377:0:Tyes33703377533373380341337
MMAR368407:0:Tyes860868586870120886
MMAR394221:0:Tyes-4-0----2
MMAR402880:1:Tyes4158094150415414809383415
MMAR426368:0:Tyes1390103513900-1391103513941390
MMAR444158:0:Tyes6402613976540206
MMAZ192952:0:Tyes415041510484154140413415
MPET420662:0:Tyes0--------
MPET420662:1:Tyes-0712708712711-710-
MSED399549:0:Tyes-88-0---1288-
MSME246196:0:Tyes0715274-22012202112722032201
MSP164756:1:Tno214901757-17571758-17591757
MSP164757:0:Tno218301733-17331734-17351733
MSP189918:2:Tyes217801785-17851786-17871785
MSP266779:3:Tyes-2020-01117780
MSP400668:0:Tyes02535--0124622578-
MSP409:2:Tyes36454626-115810-30211
MSTA339860:0:Tyes415407177-615400-
MSUC221988:0:Tyes--131957713191318224302247
MTBCDC:0:Tno0-3098-309830976930963098
MTBRV:0:Tno0-2916-291629157029142916
MTHE187420:0:Tyes2723921-02
MTHE264732:0:Tyes8828838828798828818830882
MTHE349307:0:Tyes0553011660155320
MTUB336982:0:Tno0-2883-288328827128812883
MTUB419947:0:Tyes0-3009-300930087130073009
MVAN350058:0:Tyes192201922-1922192397519241922
NARO279238:0:Tyes-114--4894900491489
NEUR228410:0:Tyes-0123912341239123801237-
NEUT335283:2:Tyes-978170171697815-
NFAR247156:2:Tyes185303090-30903089309230881853
NGON242231:0:Tyes374--323743730371-
NHAM323097:2:Tyes2472-2472246524722471024702472
NMEN122586:0:Tno480--0480479110477-
NMEN122587:0:Tyes464--046446380461-
NMEN272831:0:Tno387--038738646384-
NMEN374833:0:Tno487--048748680484-
NMUL323848:3:Tyes-0-107128127-126-
NOCE323261:1:Tyes--5215175215200519-
NPHA348780:2:Tyes7932165-0-792---
NSP103690:6:Tyes2320461232025512320233446102320
NSP35761:1:Tyes017171691-16911690-16891691
NSP387092:0:Tyes7170717131871771801067717
NWIN323098:0:Tyes2153-2153214821532152021512153
OANT439375:5:Tyes--358-17261727017351726
OCAR504832:0:Tyes2090181721018368308310832830
OIHE221109:0:Tyes-430324-3
PABY272844:0:Tyes0702--71-
PACN267747:0:Tyes-------0-
PAER178306:0:Tyes-0-999---1992-
PAER208963:0:Tyes3345-3262-46944693046924694
PAER208964:0:Tno1078-1163-44034402044014403
PARC259536:0:Tyes0-0-0177620
PARS340102:0:Tyes-556-347---0-
PATL342610:0:Tyes0-026730136583663-
PCAR338963:0:Tyes34303246143
PCRY335284:1:Tyes0-0-0155020
PDIS435591:0:Tyes-0-1878--1887--
PENT384676:0:Tyes--1300-41704169041684170
PFLU205922:0:Tyes-16490-32343233381532323234
PFLU216595:1:Tyes-5330-3283328238463281-
PFLU220664:0:Tyes--0-34963495409934943496
PFUR186497:0:Tyes0702--71-
PHAL326442:0:Tyes3250--325324---
PHAL326442:1:Tyes---2073--196001962
PING357804:0:Tyes303518153035030353036129616131
PISL384616:0:Tyes-187-1233---0-
PLUM243265:0:Fyes1-1810103610221039
PLUT319225:0:Tyes-7-063726
PMAR146891:0:Tyes-253-58807482539300
PMAR167539:0:Tyes0326061707343268780
PMAR167540:0:Tyes-250-54606372508040
PMAR167542:0:Tyes-223-57907502239060
PMAR167546:0:Tyes0283-62407952839510
PMAR167555:0:Tyes022709420102622711630
PMAR59920:0:Tno171301713513171359107141713
PMAR74546:0:Tyes-257-55507352579020
PMAR74547:0:Tyes935254935818935872-0935
PMAR93060:0:Tyes0263-59907602639490
PMEN399739:0:Tyes17-18120171832622017
PMOB403833:0:Tyes343032413
PMUL272843:1:Tyes--1109310756415759
PNAP365044:8:Tyes-1162-401-2-
PPRO298386:2:Tyes--2185334340341349803496
PPUT160488:0:Tno--0-380379826378-
PPUT351746:0:Tyes--0-29832982344529812983
PPUT76869:0:Tno--0-8308291332828-
PRUM264731:0:Tyes---0--334--
PSP117:0:Tyes-1137-1605-1-01690
PSP296591:2:Tyes742024882662612620263-
PSP312153:0:Tyes044440435440439-438-
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