CANDIDATE ID: 211

CANDIDATE ID: 211

NUMBER OF GENES: 8
AVERAGE SCORE:    9.9920211e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    8.7500000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7682 (degQ) (b3234)
   Products of gene:
     - G7682-MONOMER (serine endoprotease, periplasmic)
       Reactions:
        a polypeptide[periplasmic space]  =  2 a polypeptide[periplasmic space]

- G7680 (yhcM) (b3232)
   Products of gene:
     - G7680-MONOMER (conserved protein with nucleoside triphosphate hydrolase domain)

- G7657 (yrbA) (b3190)
   Products of gene:
     - G7657-MONOMER (predicted DNA-binding transcriptional regulator)

- EG11652 (degS) (b3235)
   Products of gene:
     - EG11652-MONOMER (DegS serine endoprotease)

- EG10978 (sspB) (b3228)
   Products of gene:
     - EG10978-MONOMER (SspB)
     - CPLX0-2681 (ClpXP protease specificity-enhancing factor)

- EG10977 (sspA) (b3229)
   Products of gene:
     - EG10977-MONOMER (stringent starvation protein A)

- EG10908 (rpsI) (b3230)
   Products of gene:
     - EG10908-MONOMER (30S ribosomal subunit protein S9)
     - CPLX0-3953 (30S ribosomal subunit)
       Regulatees:
        TU00345 (rpsB-tsf)
     - CPLX0-3964 (ribosome)

- EG10874 (rplM) (b3231)
   Products of gene:
     - EG10874-MONOMER (50S ribosomal subunit protein L13)
     - CPLX0-3962 (50S ribosomal subunit)
     - CPLX0-3964 (ribosome)



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ORGANISMS CONTAINING AT LEAST 7 GENES FROM THE GROUP:

Total number of orgs: 169
Effective number of orgs (counting one per cluster within 468 clusters): 107

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317588
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329538
YPES386656 ncbi Yersinia pestis Pestoides F8
YPES377628 ncbi Yersinia pestis Nepal5168
YPES360102 ncbi Yersinia pestis Antiqua8
YPES349746 ncbi Yersinia pestis Angola8
YPES214092 ncbi Yersinia pestis CO928
YPES187410 ncbi Yersinia pestis KIM 108
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80818
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A7
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110187
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103317
XFAS405440 ncbi Xylella fastidiosa M127
XFAS183190 ncbi Xylella fastidiosa Temecula17
XFAS160492 ncbi Xylella fastidiosa 9a5c7
XCAM487884 Xanthomonas campestris pv. paulliniae7
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-107
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80047
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339137
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3067
VVUL216895 ncbi Vibrio vulnificus CMCP68
VVUL196600 ncbi Vibrio vulnificus YJ0168
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106338
VFIS312309 ncbi Vibrio fischeri ES1148
VEIS391735 ncbi Verminephrobacter eiseniae EF01-28
VCHO345073 ncbi Vibrio cholerae O3958
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169618
TTUR377629 ncbi Teredinibacter turnerae T79018
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252597
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT28
SSP94122 ncbi Shewanella sp. ANA-38
SSON300269 ncbi Shigella sonnei Ss0468
SSED425104 ncbi Shewanella sediminis HAW-EB38
SPRO399741 ncbi Serratia proteamaculans 5688
SPEA398579 ncbi Shewanella pealeana ATCC 7003458
SONE211586 ncbi Shewanella oneidensis MR-18
SLOI323850 ncbi Shewanella loihica PV-48
SHIGELLA ncbi Shigella flexneri 2a str. 2457T8
SHAL458817 ncbi Shewanella halifaxensis HAW-EB48
SGLO343509 ncbi Sodalis glossinidius morsitans8
SFLE373384 ncbi Shigella flexneri 5 str. 84018
SFLE198214 ncbi Shigella flexneri 2a str. 3018
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4768
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B678
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91508
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT188
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty28
SDYS300267 ncbi Shigella dysenteriae Sd1978
SDEN318161 ncbi Shewanella denitrificans OS2178
SDEG203122 ncbi Saccharophagus degradans 2-408
SBOY300268 ncbi Shigella boydii Sb2278
SBAL402882 ncbi Shewanella baltica OS1858
SBAL399599 ncbi Shewanella baltica OS1958
RSOL267608 ncbi Ralstonia solanacearum GMI10008
RMET266264 ncbi Ralstonia metallidurans CH348
RFER338969 ncbi Rhodoferax ferrireducens T1188
REUT381666 ncbi Ralstonia eutropha H168
REUT264198 ncbi Ralstonia eutropha JMP1348
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30008
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a8
PSTU379731 ncbi Pseudomonas stutzeri A15018
PSP56811 Psychrobacter sp.7
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-18
PSP296591 ncbi Polaromonas sp. JS6668
PPUT76869 ncbi Pseudomonas putida GB-18
PPUT351746 ncbi Pseudomonas putida F18
PPUT160488 ncbi Pseudomonas putida KT24408
PPRO298386 ncbi Photobacterium profundum SS98
PNAP365044 ncbi Polaromonas naphthalenivorans CJ28
PMUL272843 ncbi Pasteurella multocida multocida Pm707
PMEN399739 ncbi Pseudomonas mendocina ymp8
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO18
PING357804 ncbi Psychromonas ingrahamii 378
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1258
PFLU220664 ncbi Pseudomonas fluorescens Pf-58
PFLU216595 ncbi Pseudomonas fluorescens SBW257
PFLU205922 ncbi Pseudomonas fluorescens Pf0-18
PENT384676 ncbi Pseudomonas entomophila L488
PCRY335284 ncbi Psychrobacter cryohalolentis K57
PATL342610 ncbi Pseudoalteromonas atlantica T6c8
PARC259536 ncbi Psychrobacter arcticus 273-47
PAER208964 ncbi Pseudomonas aeruginosa PAO18
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA148
NOCE323261 ncbi Nitrosococcus oceani ATCC 197077
NMUL323848 ncbi Nitrosospira multiformis ATCC 251967
NMEN122586 ncbi Neisseria meningitidis MC587
NEUT335283 ncbi Nitrosomonas eutropha C917
NEUR228410 ncbi Nitrosomonas europaea ATCC 197187
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E7
MSP400668 ncbi Marinomonas sp. MWYL18
MPET420662 ncbi Methylibium petroleiphilum PM18
MMAG342108 ncbi Magnetospirillum magneticum AMB-17
MFLA265072 ncbi Methylobacillus flagellatus KT7
MCAP243233 ncbi Methylococcus capsulatus Bath7
MAQU351348 ncbi Marinobacter aquaeolei VT87
LPNE400673 ncbi Legionella pneumophila Corby8
LPNE297246 ncbi Legionella pneumophila Paris8
LPNE297245 ncbi Legionella pneumophila Lens8
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 18
LCHO395495 ncbi Leptothrix cholodnii SP-68
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785788
JSP375286 ncbi Janthinobacterium sp. Marseille8
ILOI283942 ncbi Idiomarina loihiensis L2TR8
HSOM228400 ncbi Haemophilus somnus 23367
HSOM205914 ncbi Haemophilus somnus 129PT7
HINF71421 ncbi Haemophilus influenzae Rd KW207
HINF374930 ncbi Haemophilus influenzae PittEE7
HINF281310 ncbi Haemophilus influenzae 86-028NP7
HHAL349124 ncbi Halorhodospira halophila SL18
HDUC233412 ncbi Haemophilus ducreyi 35000HP7
HCHE349521 ncbi Hahella chejuensis KCTC 23968
HARS204773 ncbi Herminiimonas arsenicoxydans8
ESP42895 Enterobacter sp.8
EFER585054 ncbi Escherichia fergusonii ATCC 354698
ECOO157 ncbi Escherichia coli O157:H7 EDL9338
ECOL83334 Escherichia coli O157:H78
ECOL585397 ncbi Escherichia coli ED1a8
ECOL585057 ncbi Escherichia coli IAI398
ECOL585056 ncbi Escherichia coli UMN0268
ECOL585055 ncbi Escherichia coli 559898
ECOL585035 ncbi Escherichia coli S888
ECOL585034 ncbi Escherichia coli IAI18
ECOL481805 ncbi Escherichia coli ATCC 87398
ECOL469008 ncbi Escherichia coli BL21(DE3)8
ECOL439855 ncbi Escherichia coli SMS-3-58
ECOL413997 ncbi Escherichia coli B str. REL6068
ECOL409438 ncbi Escherichia coli SE118
ECOL405955 ncbi Escherichia coli APEC O18
ECOL364106 ncbi Escherichia coli UTI898
ECOL362663 ncbi Escherichia coli 5368
ECOL331111 ncbi Escherichia coli E24377A8
ECOL316407 ncbi Escherichia coli K-12 substr. W31108
ECOL199310 ncbi Escherichia coli CFT0738
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10438
DARO159087 ncbi Dechloromonas aromatica RCB8
CSAL290398 ncbi Chromohalobacter salexigens DSM 30438
CPSY167879 ncbi Colwellia psychrerythraea 34H8
CJAP155077 Cellvibrio japonicus7
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1117
CBUR360115 ncbi Coxiella burnetii RSA 3317
CBUR227377 ncbi Coxiella burnetii RSA 4937
BVIE269482 ncbi Burkholderia vietnamiensis G48
BTHA271848 ncbi Burkholderia thailandensis E2648
BSP36773 Burkholderia sp.8
BPSE320373 ncbi Burkholderia pseudomallei 6688
BPSE320372 ncbi Burkholderia pseudomallei 1710b8
BPSE272560 ncbi Burkholderia pseudomallei K962438
BPET94624 Bordetella petrii8
BPER257313 ncbi Bordetella pertussis Tohama I8
BPAR257311 ncbi Bordetella parapertussis 128228
BMAL320389 ncbi Burkholderia mallei NCTC 102478
BMAL320388 ncbi Burkholderia mallei SAVP18
BMAL243160 ncbi Burkholderia mallei ATCC 233448
BCEN331272 ncbi Burkholderia cenocepacia HI24248
BCEN331271 ncbi Burkholderia cenocepacia AU 10548
BBRO257310 ncbi Bordetella bronchiseptica RB508
BAMB398577 ncbi Burkholderia ambifaria MC40-68
BAMB339670 ncbi Burkholderia ambifaria AMMD8
ASP76114 ncbi Aromatoleum aromaticum EbN18
ASP62977 ncbi Acinetobacter sp. ADP18
ASP62928 ncbi Azoarcus sp. BH728
ASP232721 ncbi Acidovorax sp. JS428
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4498
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL037
APLE416269 ncbi Actinobacillus pleuropneumoniae L207
AHYD196024 Aeromonas hydrophila dhakensis8
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-18
ABOR393595 ncbi Alcanivorax borkumensis SK28
ABAU360910 ncbi Bordetella avium 197N8


Names of the homologs of the genes in the group in each of these orgs
  G7682   G7680   G7657   EG11652   EG10978   EG10977   EG10908   EG10874   
YPSE349747 YPSIP31758_0456YPSIP31758_0458YPSIP31758_0453YPSIP31758_0455YPSIP31758_0463YPSIP31758_0462YPSIP31758_0461YPSIP31758_0459
YPSE273123 YPTB3511YPTB3509YPTB3514YPTB3512YPTB3505YPTB3506YPTB3507YPTB3508
YPES386656 YPDSF_0331YPDSF_0333YPDSF_0327YPDSF_0329YPDSF_0337YPDSF_0336YPDSF_0335YPDSF_0334
YPES377628 YPN_3448YPN_3446YPN_3452YPN_3450YPN_3442YPN_3443YPN_3444YPN_3445
YPES360102 YPA_3737YPA_3739YPA_3733YPA_3735YPA_3743YPA_3742YPA_3741YPA_3740
YPES349746 YPANGOLA_A1137YPANGOLA_A1135YPANGOLA_A1141YPANGOLA_A1139YPANGOLA_A1131YPANGOLA_A1132YPANGOLA_A1133YPANGOLA_A1134
YPES214092 YPO3566YPO3564YPO3570YPO3568YPO3560YPO3561YPO3562YPO3563
YPES187410 Y0137Y0135Y0141Y0139Y0131Y0132Y0133Y0134
YENT393305 YE3744YE3742YE3747YE3745YE3738YE3739YE3740YE3741
XORY360094 XOOORF_0060XOOORF_0399XOOORF_0060XOOORF_1949XOOORF_1948XOOORF_0650XOOORF_0649
XORY342109 XOO0115XOO4137XOO0115XOO2598XOO2599XOO3928XOO3929
XORY291331 XOO0059XOO4394XOO0059XOO2758XOO2759XOO4152XOO4153
XFAS405440 XFASM12_0250XFASM12_1195XFASM12_0250XFASM12_1941XFASM12_1942XFASM12_0875XFASM12_0876
XFAS183190 PD_0231PD_1039PD_0231PD_1773PD_1774PD_0751PD_0752
XFAS160492 XF0285XF1828XF0285XF0912XF0911XF1536XF1537
XCAM487884 XCC-B100_4087XCC-B100_0283XCC-B100_4087XCC-B100_1852XCC-B100_1851XCC-B100_0507XCC-B100_0506
XCAM316273 XCAORF_0378XCAORF_4250XCAORF_0378XCAORF_2593XCAORF_2594XCAORF_4035XCAORF_4036
XCAM314565 XC_3986XC_0271XC_3986XC_1796XC_1795XC_0491XC_0490
XCAM190485 XCC3898XCC0261XCC3898XCC2320XCC2321XCC0477XCC0476
XAXO190486 XAC3980XAC0280XAC3980XAC2453XAC2454XAC0488XAC0487
VVUL216895 VV1_0603VV1_0600VV1_0680VV1_0604VV1_0593VV1_0594VV1_0598VV1_0599
VVUL196600 VV0591VV0593VV0460VV0590VV0600VV0599VV0595VV0594
VPAR223926 VP0433VP0436VP2659VP0432VP0445VP0444VP0439VP0438
VFIS312309 VF2225VF2223VF0400VF2226VF2215VF2216VF2221VF2222
VEIS391735 VEIS_1784VEIS_3976VEIS_4454VEIS_1784VEIS_3931VEIS_3932VEIS_2639VEIS_2638
VCHO345073 VC0395_A0100VC0395_A0102VC0395_A2097VC0395_A0099VC0395_A0109VC0395_A0108VC0395_A0104VC0395_A0103
VCHO VC0566VC0568VC2515VC0565VC0577VC0576VC0571VC0570
TTUR377629 TERTU_4641TERTU_3681TERTU_3812TERTU_3683TERTU_3675TERTU_3676TERTU_3679TERTU_3680
TDEN292415 TBD_1834TBD_1892TBD_1834TBD_1829TBD_1830TBD_0454TBD_0453
STYP99287 STM3348STM3346STM3308STM3349STM3341STM3342STM3344STM3345
SSP94122 SHEWANA3_0690SHEWANA3_0691SHEWANA3_0683SHEWANA3_0689SHEWANA3_0605SHEWANA3_0604SHEWANA3_0693SHEWANA3_0692
SSON300269 SSO_3375SSO_3373SSO_3338SSO_3376SSO_3369SSO_3370SSO_3371SSO_3372
SSED425104 SSED_0744SSED_0746SSED_0738SSED_0743SSED_0805SSED_0804SSED_0748SSED_0747
SPRO399741 SPRO_4352SPRO_4350SPRO_4355SPRO_4353SPRO_4346SPRO_4347SPRO_4348SPRO_4349
SPEA398579 SPEA_3598SPEA_3596SPEA_3604SPEA_3599SPEA_3532SPEA_3533SPEA_3594SPEA_3595
SONE211586 SO_3942SO_3941SO_3949SO_3943SO_0612SO_0611SO_3939SO_3940
SLOI323850 SHEW_3296SHEW_3295SHEW_3299SHEW_3297SHEW_0574SHEW_0573SHEW_3293SHEW_3294
SHIGELLA HTRAYHCMYRBADEGSSSPBSSPARPSIRPLM
SHAL458817 SHAL_3686SHAL_3684SHAL_3693SHAL_3687SHAL_3626SHAL_3627SHAL_3682SHAL_3683
SGLO343509 SG0213SG0215SG0210SG0212SG0219SG0218SG0217SG0216
SFLE373384 SFV_3261SFV_3259SFV_3220SFV_3262SFV_3255SFV_3256SFV_3257SFV_3258
SFLE198214 AAN44738.1AAN44736.1AAN44696.1AAN44739.1AAN44732.1AAN44733.1AAN44734.1AAN44735.1
SENT454169 SEHA_C3646SEHA_C3644SEHA_C3605SEHA_C3647SEHA_C3639SEHA_C3640SEHA_C3642SEHA_C3643
SENT321314 SCH_3286SCH_3284SCH_3246SCH_3287SCH_3279SCH_3280SCH_3282SCH_3283
SENT295319 SPA3215SPA3213SPA3175SPA3216SPA3209SPA3210SPA3211SPA3212
SENT220341 STY3528STY3526STY3487STY3529STY3522STY3523STY3524STY3525
SENT209261 T3264T3262T3225T3265T3258T3259T3260T3261
SDYS300267 SDY_3410SDY_3408SDY_3371SDY_3411SDY_3404SDY_3405SDY_3406SDY_3407
SDEN318161 SDEN_0504SDEN_0505SDEN_0501SDEN_0503SDEN_3197SDEN_3198SDEN_0507SDEN_0506
SDEG203122 SDE_3731SDE_3165SDE_3171SDE_3167SDE_3159SDE_3160SDE_3163SDE_3164
SBOY300268 SBO_3155SBO_3157SBO_3192SBO_3154SBO_3161SBO_3160SBO_3159SBO_3158
SBAL402882 SHEW185_0700SHEW185_0701SHEW185_0697SHEW185_0699SHEW185_3759SHEW185_3760SHEW185_0703SHEW185_0702
SBAL399599 SBAL195_0730SBAL195_0731SBAL195_0727SBAL195_0729SBAL195_3885SBAL195_3886SBAL195_0733SBAL195_0732
RSOL267608 RSC2932RSC1272RSC2954RSC2932RSC2925RSC2926RSC0491RSC0490
RMET266264 RMET_3233RMET_2047RMET_3251RMET_3233RMET_3226RMET_3227RMET_0411RMET_0410
RFER338969 RFER_2959RFER_2318RFER_2943RFER_2959RFER_2968RFER_2967RFER_0722RFER_0721
REUT381666 H16_A3401H16_A2322H16_A3419H16_A3401H16_A3394H16_A3395H16_A0483H16_A0482
REUT264198 REUT_A3096REUT_A2044REUT_A3114REUT_A3096REUT_A3089REUT_A3090REUT_A0469REUT_A0468
PSYR223283 PSPTO_4435PSPTO_4428PSPTO_4442PSPTO_4435PSPTO_4423PSPTO_4424PSPTO_4425PSPTO_4426
PSYR205918 PSYR_4130PSYR_4122PSYR_4136PSYR_4130PSYR_4117PSYR_4118PSYR_4119PSYR_4120
PSTU379731 PST_1227PST_3629PST_1043PST_1048PST_1067PST_1066PST_1062PST_1061
PSP56811 PSYCPRWF_1406PSYCPRWF_0500PSYCPRWF_1580PSYCPRWF_0792PSYCPRWF_0793PSYCPRWF_0797PSYCPRWF_0798
PSP312153 PNUC_0123PNUC_0843PNUC_0104PNUC_0123PNUC_0129PNUC_0128PNUC_1885PNUC_1886
PSP296591 BPRO_0817BPRO_2621BPRO_0801BPRO_0817BPRO_0825BPRO_0824BPRO_4112BPRO_4113
PPUT76869 PPUTGB1_4377PPUTGB1_4537PPUTGB1_0970PPUTGB1_4548PPUTGB1_4528PPUTGB1_4529PPUTGB1_4533PPUTGB1_4534
PPUT351746 PPUT_4291PPUT_4412PPUT_1002PPUT_4424PPUT_4403PPUT_4404PPUT_4408PPUT_4409
PPUT160488 PP_1430PP_1312PP_0963PP_1301PP_1321PP_1320PP_1316PP_1315
PPRO298386 PBPRA3240PBPRA3238PBPRA3243PBPRA3241PBPRA3231PBPRA3232PBPRA3236PBPRA3237
PNAP365044 PNAP_0709PNAP_1859PNAP_0693PNAP_0709PNAP_0717PNAP_0716PNAP_0501PNAP_0500
PMUL272843 PM0734PM0179PM0748PM0523PM0522PM0521PM0520
PMEN399739 PMEN_1471PMEN_0895PMEN_0881PMEN_0888PMEN_0907PMEN_0906PMEN_0902PMEN_0901
PLUM243265 PLU4018PLU4016PLU4029PLU4022PLU4012PLU4013PLU4014PLU4015
PING357804 PING_1037PING_2878PING_2882PING_2880PING_2870PING_2871PING_2876PING_2877
PHAL326442 PSHAA2536PSHAA2534PSHAA2539PSHAA2537PSHAA2526PSHAA2527PSHAA2531PSHAA2532
PFLU220664 PFL_1451PFL_5086PFL_0926PFL_0933PFL_5076PFL_5077PFL_5081PFL_5082
PFLU216595 PFLU0835PFLU0893PFLU0758PFLU0845PFLU0844PFLU0840PFLU0839
PFLU205922 PFL_1365PFL_4698PFL_0868PFL_0875PFL_4688PFL_4689PFL_4693PFL_4694
PENT384676 PSEEN4293PSEEN4510PSEEN1104PSEEN4521PSEEN4501PSEEN4502PSEEN4506PSEEN4507
PCRY335284 PCRYO_1094PCRYO_2195PCRYO_1115PCRYO_1587PCRYO_1586PCRYO_1748PCRYO_1747
PATL342610 PATL_0553PATL_0551PATL_0556PATL_0554PATL_3697PATL_3698PATL_3702PATL_3703
PARC259536 PSYC_1288PSYC_1905PSYC_1270PSYC_1424PSYC_1423PSYC_1566PSYC_1565
PAER208964 PA0766PA4438PA4451PA4446PA4427PA4428PA4432PA4433
PAER208963 PA14_54390PA14_57650PA14_57820PA14_57760PA14_57520PA14_57530PA14_57580PA14_57590
NOCE323261 NOC_2139NOC_2387NOC_2139NOC_0295NOC_0296NOC_2837NOC_2836
NMUL323848 NMUL_A0510NMUL_A2742NMUL_A0510NMUL_A1001NMUL_A1002NMUL_A0560NMUL_A0561
NMEN122586 NMB_0532NMB_1306NMB_0009NMB_1952NMB_1953NMB_2056NMB_2057
NEUT335283 NEUT_1685NEUT_0858NEUT_1685NEUT_1114NEUT_1113NEUT_0763NEUT_0762
NEUR228410 NE1508NE2377NE1508NE0813NE0812NE1483NE1484
MSUC221988 MS0993MS1708MS1373MS1280MS1281MS1282MS1283
MSP400668 MMWYL1_1102MMWYL1_2401MMWYL1_2409MMWYL1_2404MMWYL1_2397MMWYL1_2398MMWYL1_2399MMWYL1_2400
MPET420662 MPE_A0844MPE_A2009MPE_A0828MPE_A0844MPE_A0853MPE_A0852MPE_A3156MPE_A3157
MMAG342108 AMB3492AMB3956AMB2116AMB3481AMB3942AMB3556AMB3557
MFLA265072 MFLA_0261MFLA_0244MFLA_0261MFLA_0264MFLA_0263MFLA_0056MFLA_0055
MCAP243233 MCA_2343MCA_0260MCA_2343MCA_1958MCA_1959MCA_0905MCA_0904
MAQU351348 MAQU_2259MAQU_2697MAQU_2704MAQU_2466MAQU_2467MAQU_2471MAQU_2472
LPNE400673 LPC_0747LPC_0480LPC_2449LPC_0747LPC_0434LPC_0433LPC_0429LPC_0428
LPNE297246 LPP1285LPP2713LPP0908LPP1285LPP2756LPP2757LPP2761LPP2762
LPNE297245 LPL1284LPL2586LPL0877LPL1284LPL2629LPL2630LPL2634LPL2635
LPNE272624 LPG1331LPG2659LPG0846LPG1331LPG2701LPG2702LPG2706LPG2707
LCHO395495 LCHO_1605LCHO_2880LCHO_1584LCHO_1605LCHO_0934LCHO_0933LCHO_3451LCHO_3452
KPNE272620 GKPORF_B2968GKPORF_B2966GKPORF_B2935GKPORF_B2969GKPORF_B2962GKPORF_B2963GKPORF_B2964GKPORF_B2965
JSP375286 MMA_3275MMA_1516MMA_3291MMA_3275MMA_3267MMA_3268MMA_0295MMA_0294
ILOI283942 IL0411IL0413IL0408IL0410IL0420IL0419IL0415IL0414
HSOM228400 HSM_1285HSM_1585HSM_1533HSM_1222HSM_1221HSM_1220HSM_1219
HSOM205914 HS_0816HS_1168HS_1049HS_0755HS_0754HS_0753HS_0752
HINF71421 HI_1259HI_1082HI_0945HI_1440HI_1441HI_1442HI_1443
HINF374930 CGSHIEE_04045CGSHIEE_06655CGSHIEE_07240CGSHIEE_04800CGSHIEE_04805CGSHIEE_04810CGSHIEE_04815
HINF281310 NTHI1905NTHI1245NTHI1116NTHI1690NTHI1689NTHI1688NTHI1687
HHAL349124 HHAL_2110HHAL_0954HHAL_2115HHAL_2110HHAL_2105HHAL_2106HHAL_2076HHAL_2077
HDUC233412 HD_0260HD_0254HD_1350HD_1426HD_1425HD_1493HD_1494
HCHE349521 HCH_01114HCH_05300HCH_05308HCH_05303HCH_10003HCH_05897HCH_05901HCH_05902
HARS204773 HEAR3056HEAR1768HEAR3072HEAR3056HEAR3048HEAR3049HEAR0241HEAR0240
ESP42895 ENT638_3669ENT638_3667ENT638_3626ENT638_3670ENT638_3663ENT638_3664ENT638_3665ENT638_3666
EFER585054 EFER_3205EFER_3203EFER_3167EFER_3206EFER_3198EFER_3199EFER_3201EFER_3202
ECOO157 DEGQYHCMYRBADEGSSSPBSSPARPSIRPLM
ECOL83334 ECS4107ECS4105ECS4069ECS4108ECS4101ECS4102ECS4103ECS4104
ECOL585397 ECED1_3884ECED1_3882ECED1_3848ECED1_3885ECED1_3878ECED1_3879ECED1_3880ECED1_3881
ECOL585057 ECIAI39_3724ECIAI39_3722ECIAI39_3685ECIAI39_3725ECIAI39_3717ECIAI39_3718ECIAI39_3720ECIAI39_3721
ECOL585056 ECUMN_3708ECUMN_3706ECUMN_3670ECUMN_3709ECUMN_3702ECUMN_3703ECUMN_3704ECUMN_3705
ECOL585055 EC55989_3647EC55989_3645EC55989_3608EC55989_3648EC55989_3641EC55989_3642EC55989_3643EC55989_3644
ECOL585035 ECS88_3610ECS88_3608ECS88_3572ECS88_3611ECS88_3604ECS88_3605ECS88_3606ECS88_3607
ECOL585034 ECIAI1_3376ECIAI1_3374ECIAI1_3338ECIAI1_3377ECIAI1_3370ECIAI1_3371ECIAI1_3372ECIAI1_3373
ECOL481805 ECOLC_0472ECOLC_0474ECOLC_0510ECOLC_0471ECOLC_0478ECOLC_0477ECOLC_0476ECOLC_0475
ECOL469008 ECBD_0513ECBD_0515ECBD_0552ECBD_0512ECBD_0519ECBD_0518ECBD_0517ECBD_0516
ECOL439855 ECSMS35_3530ECSMS35_3528ECSMS35_3486ECSMS35_3531ECSMS35_3523ECSMS35_3524ECSMS35_3525ECSMS35_3527
ECOL413997 ECB_03094ECB_03092ECB_03055ECB_03095ECB_03088ECB_03089ECB_03090ECB_03091
ECOL409438 ECSE_3513ECSE_3511ECSE_3474ECSE_3514ECSE_3507ECSE_3508ECSE_3509ECSE_3510
ECOL405955 APECO1_3210APECO1_3212APECO1_3244APECO1_3209APECO1_3216APECO1_3215APECO1_3214APECO1_3213
ECOL364106 UTI89_C3665UTI89_C3662UTI89_C3624UTI89_C3666UTI89_C3657UTI89_C3658UTI89_C3660UTI89_C3661
ECOL362663 ECP_3317ECP_3315ECP_3277ECP_3318ECP_3310ECP_3311ECP_3313ECP_3314
ECOL331111 ECE24377A_3717ECE24377A_3715ECE24377A_3676ECE24377A_3718ECE24377A_3710ECE24377A_3712ECE24377A_3713ECE24377A_3714
ECOL316407 ECK3223:JW3203:B3234ECK3221:JW3201:B3232ECK3179:JW3157:B3190ECK3224:JW3204:B3235ECK3217:JW3197:B3228ECK3218:JW3198:B3229ECK3219:JW3199:B3230ECK3220:JW3200:B3231
ECOL199310 C3989C3986C3948C3990C3981C3982C3984C3985
ECAR218491 ECA0303ECA0305ECA0300ECA0302ECA0309ECA0308ECA0307ECA0306
DARO159087 DARO_3371DARO_2856DARO_3394DARO_3371DARO_0813DARO_0812DARO_0650DARO_0649
CSAL290398 CSAL_2211CSAL_2208CSAL_2215CSAL_2211CSAL_2204CSAL_2205CSAL_2206CSAL_2207
CPSY167879 CPS_4346CPS_4344CPS_4531CPS_4347CPS_4436CPS_4437CPS_4442CPS_4443
CJAP155077 CJA_2585CJA_2788CJA_2797CJA_2792CJA_2783CJA_2786CJA_2787
CBUR434922 COXBU7E912_0769COXBU7E912_0407COXBU7E912_1481COXBU7E912_0255COXBU7E912_0254COXBU7E912_0253COXBU7E912_0252
CBUR360115 COXBURSA331_A1196COXBURSA331_A1767COXBURSA331_A0696COXBURSA331_A1938COXBURSA331_A1939COXBURSA331_A1940COXBURSA331_A1941
CBUR227377 CBU_0755CBU_1580CBU_0582CBU_1746CBU_1747CBU_1748CBU_1749
BVIE269482 BCEP1808_0418BCEP1808_1477BCEP1808_0401BCEP1808_0418BCEP1808_0424BCEP1808_0423BCEP1808_0646BCEP1808_0645
BTHA271848 BTH_I2979BTH_I2553BTH_I2996BTH_I2979BTH_I2973BTH_I2974BTH_I1234BTH_I1233
BSP36773 BCEP18194_A3537BCEP18194_A4652BCEP18194_A3520BCEP18194_A3537BCEP18194_A3543BCEP18194_A3542BCEP18194_A3766BCEP18194_A3765
BPSE320373 BURPS668_3652BURPS668_1753BURPS668_3669BURPS668_3652BURPS668_3646BURPS668_3647BURPS668_3377BURPS668_3378
BPSE320372 BURPS1710B_A3977BURPS1710B_A2086BURPS1710B_A3994BURPS1710B_A3977BURPS1710B_A3971BURPS1710B_A3972BURPS1710B_A3695BURPS1710B_A3696
BPSE272560 BPSL3125BPSL1906BPSL3142BPSL3125BPSL3119BPSL3120BPSL2910BPSL2911
BPET94624 BPET0125BPET1835BPET0141BPET0125BPET0118BPET0119BPET0594BPET0593
BPER257313 BP2434BP1127BP3765BP0280BP0273BP0274BP2961BP2962
BPAR257311 BPP3298BPP3214BPP4264BPP4280BPP4287BPP4286BPP3883BPP3884
BMAL320389 BMA10247_2750BMA10247_1003BMA10247_2768BMA10247_2750BMA10247_2744BMA10247_2745BMA10247_2520BMA10247_2519
BMAL320388 BMASAVP1_A3254BMASAVP1_A1495BMASAVP1_A3236BMASAVP1_A3254BMASAVP1_A3260BMASAVP1_A3259BMASAVP1_A0254BMASAVP1_A0253
BMAL243160 BMA_2700BMA_1049BMA_2717BMA_2700BMA_2694BMA_2695BMA_2342BMA_2341
BCEN331272 BCEN2424_0439BCEN2424_1511BCEN2424_0422BCEN2424_0439BCEN2424_0445BCEN2424_0444BCEN2424_0680BCEN2424_0679
BCEN331271 BCEN_2668BCEN_1031BCEN_2685BCEN_2668BCEN_2662BCEN_2663BCEN_0197BCEN_0196
BBRO257310 BB3749BB3666BB4851BB4867BB4874BB4873BB4356BB4357
BAMB398577 BAMMC406_0366BAMMC406_1433BAMMC406_0349BAMMC406_0366BAMMC406_0372BAMMC406_0371BAMMC406_0600BAMMC406_0599
BAMB339670 BAMB_0357BAMB_1393BAMB_0340BAMB_0357BAMB_0363BAMB_0362BAMB_0574BAMB_0573
ASP76114 EBA2969EBA6682EBA1303EBA1283EBA1194EBA1195EBA937EBA938
ASP62977 ACIAD2586ACIAD2336ACIAD0659ACIAD1348ACIAD3015ACIAD3014ACIAD3013ACIAD3012
ASP62928 AZO3337AZO1559AZO0814AZO3337AZO0964AZO0963AZO2759AZO2760
ASP232721 AJS_0784AJS_1825AJS_0757AJS_0784AJS_0793AJS_0792AJS_0626AJS_0625
ASAL382245 ASA_0330ASA_0332ASA_0304ASA_0329ASA_0339ASA_0338ASA_0334ASA_0333
APLE434271 APJL_1306APJL_1300APJL_0744APJL_0647APJL_0648APJL_0595APJL_0594
APLE416269 APL_1293APL_1287APL_0742APL_0657APL_0658APL_0601APL_0600
AHYD196024 AHA_3908AHA_3906AHA_3934AHA_3909AHA_3899AHA_3900AHA_3904AHA_3905
AEHR187272 MLG_2213MLG_0334MLG_2218MLG_2213MLG_2207MLG_2208MLG_2241MLG_2242
ABOR393595 ABO_0815ABO_0570ABO_0559ABO_0565ABO_0582ABO_0581ABO_0577ABO_0576
ABAU360910 BAV3326BAV1206BAV3311BAV3326BAV3333BAV3332BAV2969BAV2970


Organism features enriched in list (features available for 161 out of the 169 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00006151192
Arrangment:Singles 0.006223091286
Disease:Bubonic_plague 0.000414266
Disease:Dysentery 0.000414266
Disease:Gastroenteritis 0.00023901013
Disease:Legionnaire's_disease 0.005659844
Endospores:No 3.321e-929211
GC_Content_Range4:0-40 1.981e-2212213
GC_Content_Range4:40-60 2.189e-1197224
GC_Content_Range4:60-100 0.003444452145
GC_Content_Range7:30-40 4.728e-1412166
GC_Content_Range7:40-50 0.004687443117
GC_Content_Range7:50-60 1.344e-854107
GC_Content_Range7:60-70 0.000460252134
Genome_Size_Range5:0-2 2.300e-204155
Genome_Size_Range5:2-4 0.000095736197
Genome_Size_Range5:4-6 3.433e-2098184
Genome_Size_Range5:6-10 0.00064122347
Genome_Size_Range9:1-2 1.492e-154128
Genome_Size_Range9:2-3 0.001640921120
Genome_Size_Range9:4-5 1.751e-74896
Genome_Size_Range9:5-6 2.208e-105088
Genome_Size_Range9:6-8 0.00003672238
Gram_Stain:Gram_Neg 2.892e-29148333
Habitat:Specialized 0.0051924753
Motility:No 1.275e-915151
Motility:Yes 1.037e-10108267
Optimal_temp.:- 0.006070783257
Optimal_temp.:35-37 0.00023901013
Oxygen_Req:Anaerobic 2.423e-114102
Oxygen_Req:Facultative 2.856e-986201
Pathogenic_in:Animal 0.00498402766
Pathogenic_in:No 6.515e-640226
Pathogenic_in:Plant 0.00022251115
Shape:Coccobacillus 0.0019367811
Shape:Coccus 2.198e-8482
Shape:Rod 1.138e-14135347
Shape:Spiral 0.0010957234
Temp._range:Mesophilic 0.0021716142473
Temp._range:Psychrophilic 0.000196589
Temp._range:Thermophilic 0.0001181135



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 187
Effective number of orgs (counting one per cluster within 468 clusters): 161

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP955 Wolbachia pipientis1
UURE95667 Ureaplasma urealyticum serovar 131
UURE95664 Ureaplasma urealyticum serovar 101
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278151
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TERY203124 ncbi Trichodesmium erythraeum IMS1011
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4401
STOK273063 ncbi Sulfolobus tokodaii 70
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSOL273057 ncbi Sulfolobus solfataricus P20
SPNE170187 ncbi Streptococcus pneumoniae G541
SMAR399550 ncbi Staphylothermus marinus F10
SARE391037 ncbi Salinispora arenicola CNS-2051
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
RMAS416276 ncbi Rickettsia massiliae MTU51
RALB246199 Ruminococcus albus 80
PTOR263820 ncbi Picrophilus torridus DSM 97900
PRUM264731 ncbi Prevotella ruminicola 230
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PAST100379 Onion yellows phytoplasma1
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong1
NSP35761 Nocardioides sp.0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS1
MSP164757 ncbi Mycobacterium sp. JLS1
MSP164756 ncbi Mycobacterium sp. MCS1
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LSPH444177 ncbi Lysinibacillus sphaericus C3-411
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LACI272621 ncbi Lactobacillus acidophilus NCFM1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
GFOR411154 ncbi Gramella forsetii KT08031
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S851
FSP1855 Frankia sp. EAN1pec0
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255861
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
FMAG334413 ncbi Finegoldia magna ATCC 293281
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
FALN326424 ncbi Frankia alni ACN14a1
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
EFAE226185 ncbi Enterococcus faecalis V5831
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake1
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRAD243230 ncbi Deinococcus radiodurans R11
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPER289380 ncbi Clostridium perfringens SM1011
CPER195103 ncbi Clostridium perfringens ATCC 131241
CPER195102 ncbi Clostridium perfringens 131
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10621
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C1
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138261
CCAV227941 ncbi Chlamydophila caviae GPIC1
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4001
BTUR314724 ncbi Borrelia turicatae 91E1351
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH1
BGAR290434 ncbi Borrelia garinii PBi1
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BBUR224326 ncbi Borrelia burgdorferi B311
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB1
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.1
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
AMAR234826 ncbi Anaplasma marginale St. Maries1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
AAUR290340 ncbi Arthrobacter aurescens TC11
AAEO224324 ncbi Aquifex aeolicus VF51


Names of the homologs of the genes in the group in each of these orgs
  G7682   G7680   G7657   EG11652   EG10978   EG10977   EG10908   EG10874   
WSUC273121 WS2226
WPIP955 WD_0066
UURE95667 UU576
UURE95664 UUR10_0676
UPAR505682 UPA3_0615
UMET351160
TWHI218496
TWHI203267
TVOL273116
TPEN368408
TPAL243276
TLET416591
TKOD69014
TERY203124 TERY_0678
TDEN243275 TDE_0852
TACI273075
STRO369723 STROP_3864
STOK273063
SSUI391295 SSU05_1898
SSP387093 SUN_0189
SSOL273057
SPNE170187 SPN08184
SMAR399550
SARE391037 SARE_4254
SACI330779
RSAL288705 RSAL33209_2371
RMAS416276 RMA_0289
RALB246199
PTOR263820
PRUM264731
PMAR59920 PMN2A_1103
PMAR167555 NATL1_19781
PMAR167546 P9301ORF_1757
PISL384616
PINT246198 PIN_A2138
PHOR70601
PGIN242619 PG_0593
PFUR186497
PDIS435591
PAST100379 PAM139
PARS340102
PAER178306
PACN267747 PPA1803
PABY272844
OTSU357244 OTBS_1019
NSP35761
NSEN222891
NPHA348780
MVAN350058 MVAN_2491
MTUB419947 MRA_2698
MTUB336982 TBFG_12685
MTHE349307
MTHE187420
MTBRV RV2670C
MTBCDC MT2744
MSYN262723
MSTA339860
MSP189918 MKMS_2266
MSP164757 MJLS_2209
MSP164756 MMCS_2220
MSME246196 MSMEG_2788
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054 MFLV_3912
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBOV410289 BCG_2683C
MBOV233413 MB2689C
MBAR269797
MAVI243243 MAV_3561
MART243272
MAEO419665
MACE188937
MABS561007 MAB_2975C
LSPH444177 BSPH_4582
LMES203120 LEUM_0231
LJOH257314 LJ_0367
LINT267671 LIC_10761
LINT189518 LA3408
LHEL405566 LHV_0344
LGAS324831 LGAS_0322
LDEL321956 LBUL_0383
LCAS321967
LBOR355277 LBJ_0760
LBOR355276 LBL_2318
LACI272621 LBA0324
IHOS453591
HWAL362976
HSP64091
HSAL478009
HMUK485914
HMAR272569
HBUT415426
HAUR316274
GFOR411154 GFO_0623
FSUC59374 FSU1421
FSP1855
FNUC190304 FN0330
FNOD381764 FNOD_0433
FMAG334413 FMG_1478
FJOH376686 FJOH_0019
FALN326424 FRAAL2114
ERUM302409 ERGA_CDS_06410
ERUM254945 ERWE_CDS_06500
EFAE226185 EF_3230
ECHA205920 ECH_0392
ECAN269484 ECAJ_0624
DSP255470
DSP216389
DRAD243230 DR_0759
DETH243164
CTRA471473 CTLON_0195
CTRA471472 CTL0195
CSUL444179
CPNE182082 CPB1016
CPNE138677 CPJ0979
CPNE115713 CPN0979
CPNE115711 CP_0877
CPER289380 CPR_2363
CPER195103 CPF_2678
CPER195102 CPE2369
CPEL335992 SAR11_1320
CMUR243161 TC_0210
CMIC443906 CMM_1668
CMIC31964 CMS1652
CMET456442
CMAQ397948
CKOR374847
CJEJ407148 C8J_1171
CJEJ360109 JJD26997_0497
CJEJ354242 CJJ81176_1242
CJEJ195099 CJE_1363
CJEJ192222 CJ1228C
CJEI306537
CHUT269798 CHU_3039
CHOM360107
CGLU196627
CFET360106
CFEL264202 CF0231
CEFF196164
CDIP257309
CDES477974 DAUD_0331
CCUR360105
CCON360104 CCC13826_0737
CCAV227941 CCA_00782
CBEI290402 CBEI_0187
CABO218497 CAB750
BXEN266265 BXE_C1190
BTUR314724 BT0338
BTHE226186 BT_1312
BLON206672 BL1572
BHER314723 BH0338
BGAR290434 BG0339
BFRA295405 BF2744
BFRA272559 BF2761
BBUR224326 BB_0338
BAFZ390236 BAPKO_0347
AYEL322098 AYWB_581
AURANTIMONAS
ASP1667 ARTH_1667
APHA212042 APH_0262
APER272557
AMAR234826 AM923
AFUL224325
ACEL351607 ACEL_0341
AAUR290340 AAUR_2833
AAEO224324 AQ_1877


Organism features enriched in list (features available for 177 out of the 187 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000177719112
Arrangment:Singles 0.0001842106286
Disease:Leptospirosis 0.008296244
Disease:Pharyngitis 0.000064588
Disease:bronchitis_and_pneumonitis 0.000064588
Endospores:No 1.277e-15107211
Endospores:Yes 0.0042050853
GC_Content_Range4:0-40 0.002131679213
GC_Content_Range4:60-100 0.009246434145
GC_Content_Range7:0-30 2.662e-62947
GC_Content_Range7:40-50 0.005892346117
GC_Content_Range7:50-60 0.000088417107
GC_Content_Range7:60-70 0.009802631134
Genome_Size_Range5:0-2 3.662e-1688155
Genome_Size_Range5:4-6 1.097e-926184
Genome_Size_Range9:0-1 2.343e-72127
Genome_Size_Range9:1-2 1.844e-967128
Genome_Size_Range9:4-5 0.00006281496
Genome_Size_Range9:5-6 0.00005501288
Gram_Stain:Gram_Neg 3.330e-1165333
Habitat:Host-associated 0.004899175206
Habitat:Multiple 0.000257937178
Habitat:Specialized 0.00306302553
Habitat:Terrestrial 0.0042762331
Motility:No 0.000096264151
Motility:Yes 0.000182762267
Optimal_temp.:- 0.006689866257
Optimal_temp.:37 0.000299547106
Optimal_temp.:85 0.008296244
Oxygen_Req:Anaerobic 2.656e-753102
Oxygen_Req:Facultative 7.734e-834201
Oxygen_Req:Microaerophilic 0.00460211118
Shape:Irregular_coccus 9.055e-101717
Shape:Rod 1.140e-777347
Shape:Sphere 1.132e-61619
Shape:Spiral 0.00027112034
Temp._range:Hyperthermophilic 1.706e-71923
Temp._range:Mesophilic 0.0028528132473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 1
Effective number of orgs (counting one per cluster within 468 clusters): 1

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1 0.009359812248


Names of the homologs of the genes in the group in each of these orgs
  G7682   G7680   G7657   EG11652   EG10978   EG10977   EG10908   EG10874   
PSP312153 PNUC_0123PNUC_0843PNUC_0104PNUC_0123PNUC_0129PNUC_0128PNUC_1885PNUC_1886


Organism features enriched in list (features available for 1 out of the 1 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Shape:Curved_rod 0.008576315



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181470.6651
AST-PWY (arginine degradation II (AST pathway))1201020.6358
GLYCOCAT-PWY (glycogen degradation I)2461490.6076
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001650.6042
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951280.5847
PWY-5918 (heme biosynthesis I)2721530.5766
PWY-1269 (CMP-KDO biosynthesis I)3251660.5625
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861550.5609
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901550.5525
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911550.5504
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251340.5484
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761160.5473
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961560.5473
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911210.5417
PWY-4041 (γ-glutamyl cycle)2791500.5395
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81720.5370
PWY-5386 (methylglyoxal degradation I)3051560.5291
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481660.5206
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391630.5149
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491010.5127
GLUCONSUPER-PWY (D-gluconate degradation)2291300.5083
PWY-5913 (TCA cycle variation IV)3011520.5082
PWY-5148 (acyl-CoA hydrolysis)2271290.5058
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491340.4898
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491340.4898
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831110.4863
GALACTITOLCAT-PWY (galactitol degradation)73630.4849
TYRFUMCAT-PWY (tyrosine degradation I)1841100.4755
PWY0-981 (taurine degradation IV)106770.4635
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911110.4634
GLUCARDEG-PWY (D-glucarate degradation I)152960.4604
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94710.4589
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291520.4538
LIPASYN-PWY (phospholipases)2121170.4533
PWY0-1182 (trehalose degradation II (trehalase))70570.4345
DAPLYSINESYN-PWY (lysine biosynthesis I)3421520.4297
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96690.4296
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3981640.4212
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50450.4177
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551260.4172
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001390.4163
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)135840.4152
CHOLINE-BETAINE-ANA-PWY (choline degradation I)135840.4152
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))138850.4135
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112740.4101
KDOSYN-PWY (KDO transfer to lipid IVA I)1801000.4076
PWY-5669 (phosphatidylethanolamine biosynthesis I)4161660.4074
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4221670.4056
PWY-6196 (serine racemization)102690.4032
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)179990.4024
PWY-6134 (tyrosine biosynthesis IV)89630.4009



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7680   G7657   EG11652   EG10978   EG10977   EG10908   EG10874   
G76820.9987940.9992250.9998160.9992120.9992150.9989480.999023
G76800.9985740.9991390.9989690.9987810.9990730.999217
G76570.999430.9989820.998920.9988280.998676
EG116520.9993860.9993960.9992130.999241
EG109780.9998820.9994650.999421
EG109770.9994450.99939
EG109080.999998
EG10874



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PAIRWISE BLAST SCORES:

  G7682   G7680   G7657   EG11652   EG10978   EG10977   EG10908   EG10874   
G76820.0f0-------
G7680-0.0f0------
G7657--0.0f0-----
EG116525.7e-48--0.0f0----
EG10978----0.0f0---
EG10977-----0.0f0--
EG10908------0.0f0-
EG10874-------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-3964 (ribosome) (degree of match pw to cand: 0.034, degree of match cand to pw: 0.250, average score: 0.685)
  Genes in pathway or complex:
                NIL    NIL EG30077 (rrlA) RRLA-RRNA (23S ribosomal RNA (rrlA))
                NIL    NIL EG30070 (rrfA) RRFA-RRNA (5S ribosomal RNA (rrfA))
             0.8737 0.1534 EG10864 (rplA) EG10864-MONOMER (50S ribosomal subunit protein L1)
             0.9062 0.3301 EG10865 (rplB) EG10865-MONOMER (50S ribosomal subunit protein L2)
             0.9094 0.3735 EG10866 (rplC) EG10866-MONOMER (50S ribosomal subunit protein L3)
             0.9432 0.6641 EG10867 (rplD) EG10867-MONOMER (50S ribosomal subunit protein L4)
             0.9195 0.4353 EG10868 (rplE) EG10868-MONOMER (50S ribosomal subunit protein L5)
             0.9118 0.3631 EG10869 (rplF) EG10869-MONOMER (50S ribosomal subunit protein L6)
             0.8772 0.1789 EG10873 (rplL) MONOMER0-2811 (50S ribosomal subunit protein L7)
             0.8841 0.2665 EG10871 (rplJ) EG10871-MONOMER (50S ribosomal subunit protein L10)
             0.8350 0.5216 EG10870 (rplI) EG10870-MONOMER (50S ribosomal subunit protein L9)
             0.8738 0.1572 EG10872 (rplK) EG10872-MONOMER (50S ribosomal subunit protein L11)
   *in cand* 0.9994 0.9987 EG10874 (rplM) EG10874-MONOMER (50S ribosomal subunit protein L13)
             0.8955 0.2391 EG10875 (rplN) EG10875-MONOMER (50S ribosomal subunit protein L14)
             0.9400 0.6025 EG10876 (rplO) EG10876-MONOMER (50S ribosomal subunit protein L15)
             0.8950 0.2495 EG10877 (rplP) EG10877-MONOMER (50S ribosomal subunit protein L16)
             0.9274 0.4780 EG10878 (rplQ) EG10878-MONOMER (50S ribosomal subunit protein L17)
             0.9048 0.3063 EG10879 (rplR) EG10879-MONOMER (50S ribosomal subunit protein L18)
             0.2563 0.0022 EG10880 (rplS) EG10880-MONOMER (50S ribosomal subunit protein L19)
             0.1180 0.0014 EG10881 (rplT) EG10881-MONOMER (50S ribosomal subunit protein L20)
             0.9786 0.9364 EG50001 (rplU) EG50001-MONOMER (50S ribosomal subunit protein L21)
             0.9489 0.7097 EG10882 (rplV) EG10882-MONOMER (50S ribosomal subunit protein L22)
             0.9045 0.3341 EG10883 (rplW) EG10883-MONOMER (50S ribosomal subunit protein L23)
             0.9175 0.4101 EG10884 (rplX) EG10884-MONOMER (50S ribosomal subunit protein L24)
             0.4902 0.2010 EG10885 (rplY) EG10885-MONOMER (50S ribosomal subunit protein L25)
             0.9768 0.9362 EG50002 (rpmA) EG50002-MONOMER (50S ribosomal subunit protein L27)
             0.6934 0.4150 EG10886 (rpmB) EG10886-MONOMER (50S ribosomal subunit protein L28)
             0.9065 0.3473 EG10887 (rpmC) EG10887-MONOMER (50S ribosomal subunit protein L29)
             0.9082 0.3273 EG10888 (rpmD) EG10888-MONOMER (50S ribosomal subunit protein L30)
             0.8792 0.5151 EG10889 (rpmE) EG10889-MONOMER (50S ribosomal subunit protein L31)
             0.0988 0.0006 EG10890 (rpmF) EG10890-MONOMER (50S ribosomal subunit protein L32)
             0.8160 0.0715 EG10891 (rpmG) EG10891-MONOMER (50S ribosomal subunit protein L33)
             0.8377 0.7960 EG10892 (rpmH) EG10892-MONOMER (50S ribosomal subunit protein L34)
             0.1276 0.0271 EG11231 (rpmI) EG11231-MONOMER (50S ribosomal subunit protein L35)
             0.9172 0.4962 EG11232 (rpmJ) EG11232-MONOMER (50S ribosomal subunit protein L36)
                NIL    NIL EG30084 (rrsA) RRSA-RRNA (16S ribosomal RNA (rrsA))
             0.1776 0.0003 EG10900 (rpsA) EG10900-MONOMER (30S ribosomal subunit protein S1)
             0.3319 0.0449 EG10901 (rpsB) EG10901-MONOMER (30S ribosomal subunit protein S2)
             0.9252 0.4873 EG10902 (rpsC) EG10902-MONOMER (30S ribosomal subunit protein S3)
             0.9541 0.7424 EG10903 (rpsD) EG10903-MONOMER (30S ribosomal subunit protein S4)
             0.9091 0.3367 EG10904 (rpsE) EG10904-MONOMER (30S ribosomal subunit protein S5)
             0.8405 0.5180 EG10905 (rpsF) EG10905-MONOMER (30S ribosomal subunit protein S6)
             0.9235 0.4590 EG10906 (rpsG) EG10906-MONOMER (30S ribosomal subunit protein S7)
             0.9203 0.4428 EG10907 (rpsH) EG10907-MONOMER (30S ribosomal subunit protein S8)
   *in cand* 0.9994 0.9988 EG10908 (rpsI) EG10908-MONOMER (30S ribosomal subunit protein S9)
             0.9095 0.3715 EG10909 (rpsJ) EG10909-MONOMER (30S ribosomal subunit protein S10)
             0.9112 0.3537 EG10910 (rpsK) EG10910-MONOMER (30S ribosomal subunit protein S11)
             0.9141 0.4010 EG10911 (rpsL) EG10911-MONOMER (30S ribosomal subunit protein S12)
             0.9263 0.4711 EG10912 (rpsM) EG10912-MONOMER (30S ribosomal subunit protein S13)
             0.9011 0.3314 EG10913 (rpsN) EG10913-MONOMER (30S ribosomal subunit protein S14)
             0.7960 0.4701 EG10914 (rpsO) EG10914-MONOMER (30S ribosomal subunit protein S15)
             0.3045 0.0026 EG10915 (rpsP) EG10915-MONOMER (30S ribosomal subunit protein S16)
             0.9363 0.5816 EG10916 (rpsQ) EG10916-MONOMER (30S ribosomal subunit protein S17)
             0.8452 0.5318 EG10917 (rpsR) EG10917-MONOMER (30S ribosomal subunit protein S18)
             0.9173 0.4763 EG10918 (rpsS) EG10918-MONOMER (30S ribosomal subunit protein S19)
             0.4793 0.0527 EG10919 (rpsT) EG10919-MONOMER (30S ribosomal subunit protein S20)
             0.8014 0.3953 EG10920 (rpsU) EG10920-MONOMER (30S ribosomal subunit protein S21)
             0.0925 0.0912 EG11508 (sra) EG11508-MONOMER (30S ribosomal subunit protein S22)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9988 EG10977 (sspA) EG10977-MONOMER (stringent starvation protein A)
   *in cand* 0.9994 0.9990 EG10978 (sspB) EG10978-MONOMER (SspB)
   *in cand* 0.9995 0.9991 EG11652 (degS) EG11652-MONOMER (DegS serine endoprotease)
   *in cand* 0.9991 0.9986 G7657 (yrbA) G7657-MONOMER (predicted DNA-binding transcriptional regulator)
   *in cand* 0.9991 0.9986 G7680 (yhcM) G7680-MONOMER (conserved protein with nucleoside triphosphate hydrolase domain)
   *in cand* 0.9993 0.9988 G7682 (degQ) G7682-MONOMER (serine endoprotease, periplasmic)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10874 EG10908 EG10977 EG10978 EG11652 G7680 G7682 (centered at EG10874)
G7657 (centered at G7657)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7682   G7680   G7657   EG11652   EG10978   EG10977   EG10908   EG10874   
264/623270/623208/623234/623187/623235/623417/623415/623
AAEO224324:0:Tyes-------0
AAUR290340:2:Tyes-0------
AAVE397945:0:Tyes-21880-2621262229742975
ABAC204669:0:Tyes---2755--10
ABAU360910:0:Tyes21290211421292136213517711772
ABOR393595:0:Tyes259110623221817
ABUT367737:0:Tyes0--0----
ACAU438753:0:Tyes02914-1408--10681067
ACEL351607:0:Tyes-------0
ACRY349163:8:Tyes0308----935-
ADEH290397:0:Tyes0-----1615-
AEHR187272:0:Tyes18660187118661860186118941895
AFER243159:0:Tyes--38-2762273310
AHYD196024:0:Tyes9735100156
ALAI441768:0:Tyes------10
AMAR234826:0:Tyes-0------
AMAR329726:9:Tyes--36142798-4057-0
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