CANDIDATE ID: 216

CANDIDATE ID: 216

NUMBER OF GENES: 8
AVERAGE SCORE:    9.9966304e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG12371 (nlpI) (b3163)
   Products of gene:
     - EG12371-MONOMER (lipoprotein involved in cell division)

- EG11179 (rimP) (b3170)
   Products of gene:
     - EG11179-MONOMER (ribosome maturation protein)

- EG11178 (rbfA) (b3167)
   Products of gene:
     - EG11178-MONOMER (30S ribosome binding factor)

- EG11177 (truB) (b3166)
   Products of gene:
     - EG11177-MONOMER (tRNA pseudouridine 55 synthase)
       Reactions:
        tRNA uridine  ->  tRNA pseudouridine

- EG10914 (rpsO) (b3165)
   Products of gene:
     - EG10914-MONOMER (30S ribosomal subunit protein S15)
     - CPLX0-3953 (30S ribosomal subunit)
       Regulatees:
        TU00345 (rpsB-tsf)
     - CPLX0-3964 (ribosome)

- EG10743 (pnp) (bfl)
   Products of gene:
     - EG10743-MONOMER (polynucleotide phosphorylase monomer)
     - CPLX0-3521 (polynucleotide phosphorylase)
       Reactions:
        a tRNA precursor with a 5' extension and a long 3' trailer  ->  a tRNA precursor with a 5' extension and a short 3' extension + n a nucleoside-5'-phosphate
         In pathways
         PWY0-1479 (tRNA processing pathway)
        RNA + phosphate  =  RNA + a nucleoside diphosphate
     - CPLX0-2381 (degradosome)

- EG10665 (nusA) (b3169)
   Products of gene:
     - EG10665-MONOMER (transcription termination/antitermination L factor)

- EG10505 (infB) (b3168)
   Products of gene:
     - EG10505-MONOMER (protein chain initiation factor IF-2)



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ORGANISMS CONTAINING AT LEAST 7 GENES FROM THE GROUP:

Total number of orgs: 271
Effective number of orgs (counting one per cluster within 468 clusters): 170

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM47
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317588
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329538
YPES386656 ncbi Yersinia pestis Pestoides F8
YPES377628 ncbi Yersinia pestis Nepal5168
YPES360102 ncbi Yersinia pestis Antiqua8
YPES349746 ncbi Yersinia pestis Angola8
YPES214092 ncbi Yersinia pestis CO928
YPES187410 ncbi Yersinia pestis KIM 108
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80818
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A7
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110187
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103317
XFAS405440 ncbi Xylella fastidiosa M127
XFAS183190 ncbi Xylella fastidiosa Temecula17
XFAS160492 ncbi Xylella fastidiosa 9a5c7
XCAM487884 Xanthomonas campestris pv. paulliniae7
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-107
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80047
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339137
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3067
XAUT78245 ncbi Xanthobacter autotrophicus Py27
VVUL216895 ncbi Vibrio vulnificus CMCP68
VVUL196600 ncbi Vibrio vulnificus YJ0168
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106338
VFIS312309 ncbi Vibrio fischeri ES1148
VCHO345073 ncbi Vibrio cholerae O3958
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169618
TTUR377629 ncbi Teredinibacter turnerae T79017
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB47
TSP1755 Thermoanaerobacter sp.7
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332237
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252597
TCRU317025 ncbi Thiomicrospira crunogena XCL-27
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen7
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT28
STHE299768 ncbi Streptococcus thermophilus CNRZ10667
STHE292459 ncbi Symbiobacterium thermophilum IAM 148637
STHE264199 ncbi Streptococcus thermophilus LMG 183117
SSP94122 ncbi Shewanella sp. ANA-38
SSON300269 ncbi Shigella sonnei Ss0468
SSED425104 ncbi Shewanella sediminis HAW-EB38
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153057
SPRO399741 ncbi Serratia proteamaculans 5688
SPNE488221 ncbi Streptococcus pneumoniae 705857
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-67
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-147
SPNE171101 ncbi Streptococcus pneumoniae R67
SPNE1313 Streptococcus pneumoniae7
SPEA398579 ncbi Shewanella pealeana ATCC 7003458
SONE211586 ncbi Shewanella oneidensis MR-18
SMUT210007 ncbi Streptococcus mutans UA1597
SLOI323850 ncbi Shewanella loihica PV-48
SHIGELLA ncbi Shigella flexneri 2a str. 2457T8
SHAL458817 ncbi Shewanella halifaxensis HAW-EB48
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14357
SGLO343509 ncbi Sodalis glossinidius morsitans8
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB8
SFLE373384 ncbi Shigella flexneri 5 str. 84018
SFLE198214 ncbi Shigella flexneri 2a str. 3018
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122287
SEPI176279 ncbi Staphylococcus epidermidis RP62A7
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4768
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B678
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91508
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT188
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty28
SDYS300267 ncbi Shigella dysenteriae Sd1978
SDEN318161 ncbi Shewanella denitrificans OS2178
SDEG203122 ncbi Saccharophagus degradans 2-407
SBOY300268 ncbi Shigella boydii Sb2278
SBAL402882 ncbi Shewanella baltica OS1858
SBAL399599 ncbi Shewanella baltica OS1958
SAUR93062 ncbi Staphylococcus aureus aureus COL7
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83257
SAUR426430 ncbi Staphylococcus aureus aureus Newman7
SAUR418127 ncbi Staphylococcus aureus aureus Mu37
SAUR367830 Staphylococcus aureus aureus USA3007
SAUR359787 ncbi Staphylococcus aureus aureus JH17
SAUR359786 ncbi Staphylococcus aureus aureus JH97
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4767
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2527
SAUR273036 ncbi Staphylococcus aureus RF1227
SAUR196620 ncbi Staphylococcus aureus aureus MW27
SAUR158879 ncbi Staphylococcus aureus aureus N3157
SAUR158878 ncbi Staphylococcus aureus aureus Mu507
SACI56780 ncbi Syntrophus aciditrophicus SB8
RSOL267608 ncbi Ralstonia solanacearum GMI10007
RMET266264 ncbi Ralstonia metallidurans CH347
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38417
REUT381666 ncbi Ralstonia eutropha H167
REUT264198 ncbi Ralstonia eutropha JMP1347
PTHE370438 ncbi Pelotomaculum thermopropionicum SI7
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30007
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a7
PSTU379731 ncbi Pseudomonas stutzeri A15017
PSP56811 Psychrobacter sp.7
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-17
PPUT76869 ncbi Pseudomonas putida GB-17
PPUT351746 ncbi Pseudomonas putida F17
PPUT160488 ncbi Pseudomonas putida KT24407
PPRO298386 ncbi Photobacterium profundum SS98
PMUL272843 ncbi Pasteurella multocida multocida Pm708
PMEN399739 ncbi Pseudomonas mendocina ymp7
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO18
PING357804 ncbi Psychromonas ingrahamii 378
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1258
PFLU220664 ncbi Pseudomonas fluorescens Pf-57
PFLU216595 ncbi Pseudomonas fluorescens SBW257
PFLU205922 ncbi Pseudomonas fluorescens Pf0-17
PENT384676 ncbi Pseudomonas entomophila L487
PCRY335284 ncbi Psychrobacter cryohalolentis K57
PCAR338963 ncbi Pelobacter carbinolicus DSM 23807
PATL342610 ncbi Pseudoalteromonas atlantica T6c8
PARC259536 ncbi Psychrobacter arcticus 273-47
PAER208964 ncbi Pseudomonas aeruginosa PAO17
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA147
OIHE221109 ncbi Oceanobacillus iheyensis HTE8317
NOCE323261 ncbi Nitrosococcus oceani ATCC 197077
NMUL323848 ncbi Nitrosospira multiformis ATCC 251967
NMEN374833 ncbi Neisseria meningitidis 0534428
NMEN272831 ncbi Neisseria meningitidis FAM188
NMEN122587 ncbi Neisseria meningitidis Z24918
NMEN122586 ncbi Neisseria meningitidis MC588
NGON242231 ncbi Neisseria gonorrhoeae FA 10908
NEUT335283 ncbi Nitrosomonas eutropha C917
NEUR228410 ncbi Nitrosomonas europaea ATCC 197187
MXAN246197 ncbi Myxococcus xanthus DK 16227
MTHE264732 ncbi Moorella thermoacetica ATCC 390737
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E8
MSP400668 ncbi Marinomonas sp. MWYL17
MPET420662 ncbi Methylibium petroleiphilum PM17
MMAG342108 ncbi Magnetospirillum magneticum AMB-17
MLOT266835 ncbi Mesorhizobium loti MAFF3030998
MFLA265072 ncbi Methylobacillus flagellatus KT7
MEXT419610 ncbi Methylobacterium extorquens PA17
MCAP243233 ncbi Methylococcus capsulatus Bath7
MAQU351348 ncbi Marinobacter aquaeolei VT87
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53347
LSPH444177 ncbi Lysinibacillus sphaericus C3-417
LPNE400673 ncbi Legionella pneumophila Corby7
LPNE297246 ncbi Legionella pneumophila Paris7
LPNE297245 ncbi Legionella pneumophila Lens7
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 17
LMON265669 ncbi Listeria monocytogenes 4b F23657
LMON169963 ncbi Listeria monocytogenes EGD-e7
LINN272626 ncbi Listeria innocua Clip112627
LCHO395495 ncbi Leptothrix cholodnii SP-67
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785788
JSP375286 ncbi Janthinobacterium sp. Marseille7
ILOI283942 ncbi Idiomarina loihiensis L2TR8
HSOM228400 ncbi Haemophilus somnus 23367
HSOM205914 ncbi Haemophilus somnus 129PT7
HMOD498761 ncbi Heliobacterium modesticaldum Ice17
HINF71421 ncbi Haemophilus influenzae Rd KW208
HINF374930 ncbi Haemophilus influenzae PittEE8
HINF281310 ncbi Haemophilus influenzae 86-028NP8
HHAL349124 ncbi Halorhodospira halophila SL17
HDUC233412 ncbi Haemophilus ducreyi 35000HP8
HCHE349521 ncbi Hahella chejuensis KCTC 23967
HARS204773 ncbi Herminiimonas arsenicoxydans7
GURA351605 ncbi Geobacter uraniireducens Rf48
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-27
GSUL243231 ncbi Geobacter sulfurreducens PCA8
GMET269799 ncbi Geobacter metallireducens GS-157
GKAU235909 ncbi Geobacillus kaustophilus HTA4267
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-007
FTUL418136 ncbi Francisella tularensis tularensis WY96-34187
FTUL401614 ncbi Francisella novicida U1127
FTUL393115 ncbi Francisella tularensis tularensis FSC1987
FTUL393011 ncbi Francisella tularensis holarctica OSU187
FTUL351581 Francisella tularensis holarctica FSC2007
FRANT ncbi Francisella tularensis tularensis SCHU S47
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250177
ESP42895 Enterobacter sp.8
EFER585054 ncbi Escherichia fergusonii ATCC 354698
EFAE226185 ncbi Enterococcus faecalis V5837
ECOO157 ncbi Escherichia coli O157:H7 EDL9338
ECOL83334 Escherichia coli O157:H78
ECOL585397 ncbi Escherichia coli ED1a8
ECOL585057 ncbi Escherichia coli IAI398
ECOL585056 ncbi Escherichia coli UMN0268
ECOL585055 ncbi Escherichia coli 559898
ECOL585035 ncbi Escherichia coli S888
ECOL585034 ncbi Escherichia coli IAI18
ECOL481805 ncbi Escherichia coli ATCC 87398
ECOL469008 ncbi Escherichia coli BL21(DE3)8
ECOL439855 ncbi Escherichia coli SMS-3-58
ECOL413997 ncbi Escherichia coli B str. REL6068
ECOL409438 ncbi Escherichia coli SE118
ECOL405955 ncbi Escherichia coli APEC O18
ECOL364106 ncbi Escherichia coli UTI898
ECOL362663 ncbi Escherichia coli 5368
ECOL331111 ncbi Escherichia coli E24377A8
ECOL316407 ncbi Escherichia coli K-12 substr. W31108
ECOL199310 ncbi Escherichia coli CFT0738
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10438
DRED349161 ncbi Desulfotomaculum reducens MI-17
DPSY177439 ncbi Desulfotalea psychrophila LSv547
DOLE96561 ncbi Desulfococcus oleovorans Hxd37
DNOD246195 ncbi Dichelobacter nodosus VCS1703A7
DHAF138119 ncbi Desulfitobacterium hafniense Y517
DARO159087 ncbi Dechloromonas aromatica RCB7
CVIO243365 ncbi Chromobacterium violaceum ATCC 124727
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA7
CSAL290398 ncbi Chromohalobacter salexigens DSM 30437
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)7
CPSY167879 ncbi Colwellia psychrerythraea 34H8
CJAP155077 Cellvibrio japonicus7
CDIF272563 ncbi Clostridium difficile 6307
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1117
CBUR360115 ncbi Coxiella burnetii RSA 3317
CBUR227377 ncbi Coxiella burnetii RSA 4937
BWEI315730 ncbi Bacillus weihenstephanensis KBAB47
BVIE269482 ncbi Burkholderia vietnamiensis G47
BTHU412694 ncbi Bacillus thuringiensis Al Hakam7
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-277
BTHA271848 ncbi Burkholderia thailandensis E2647
BSUI470137 ncbi Brucella suis ATCC 234457
BSUI204722 ncbi Brucella suis 13307
BSUB ncbi Bacillus subtilis subtilis 1687
BSP376 Bradyrhizobium sp.7
BSP36773 Burkholderia sp.7
BPUM315750 ncbi Bacillus pumilus SAFR-0327
BPSE320373 ncbi Burkholderia pseudomallei 6687
BPSE320372 ncbi Burkholderia pseudomallei 1710b7
BPSE272560 ncbi Burkholderia pseudomallei K962437
BPET94624 Bordetella petrii7
BPER257313 ncbi Bordetella pertussis Tohama I7
BPAR257311 ncbi Bordetella parapertussis 128227
BOVI236 Brucella ovis7
BMEL359391 ncbi Brucella melitensis biovar Abortus 23087
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M7
BMAL320389 ncbi Burkholderia mallei NCTC 102477
BMAL320388 ncbi Burkholderia mallei SAVP17
BMAL243160 ncbi Burkholderia mallei ATCC 233447
BLIC279010 ncbi Bacillus licheniformis ATCC 145807
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1107
BHAL272558 ncbi Bacillus halodurans C-1257
BCLA66692 ncbi Bacillus clausii KSM-K167
BCER572264 ncbi Bacillus cereus 03BB1027
BCER405917 Bacillus cereus W7
BCER315749 ncbi Bacillus cytotoxicus NVH 391-987
BCER288681 ncbi Bacillus cereus E33L7
BCEN331272 ncbi Burkholderia cenocepacia HI24247
BCEN331271 ncbi Burkholderia cenocepacia AU 10547
BCAN483179 ncbi Brucella canis ATCC 233657
BBRO257310 ncbi Bordetella bronchiseptica RB507
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1007
BANT568206 ncbi Bacillus anthracis CDC 6847
BANT261594 ncbi Bacillus anthracis Ames Ancestor7
BANT260799 ncbi Bacillus anthracis Sterne7
BAMY326423 ncbi Bacillus amyloliquefaciens FZB427
BAMB398577 ncbi Burkholderia ambifaria MC40-67
BAMB339670 ncbi Burkholderia ambifaria AMMD7
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9417
ASP76114 ncbi Aromatoleum aromaticum EbN17
ASP62977 ncbi Acinetobacter sp. ADP17
ASP62928 ncbi Azoarcus sp. BH727
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4498
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL038
APLE416269 ncbi Actinobacillus pleuropneumoniae L208
AORE350688 ncbi Alkaliphilus oremlandii OhILAs7
AMET293826 ncbi Alkaliphilus metalliredigens QYMF7
AHYD196024 Aeromonas hydrophila dhakensis8
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-17
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C7
ACRY349163 ncbi Acidiphilium cryptum JF-57
ABOR393595 ncbi Alcanivorax borkumensis SK27
ABAU360910 ncbi Bordetella avium 197N7
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3457


Names of the homologs of the genes in the group in each of these orgs
  EG12371   EG11179   EG11178   EG11177   EG10914   EG10743   EG10665   EG10505   
ZMOB264203 ZMO0557ZMO0553ZMO0551ZMO0550ZMO0549ZMO0556ZMO0554
YPSE349747 YPSIP31758_3591YPSIP31758_3598YPSIP31758_3595YPSIP31758_3594YPSIP31758_3593YPSIP31758_3592YPSIP31758_3597YPSIP31758_3596
YPSE273123 YPTB0485YPTB0478YPTB0481YPTB0482YPTB0483YPTB0484YPTB0479YPTB0480
YPES386656 YPDSF_3298YPDSF_3547YPDSF_3544YPDSF_3543YPDSF_3542YPDSF_3299YPDSF_3546YPDSF_3545
YPES377628 YPN_0598YPN_3242YPN_3239YPN_3238YPN_3237YPN_0597YPN_3241YPN_3240
YPES360102 YPA_2991YPA_0048YPA_0045YPA_0044YPA_0043YPA_2992YPA_0047YPA_0046
YPES349746 YPANGOLA_A4000YPANGOLA_A3991YPANGOLA_A3994YPANGOLA_A3995YPANGOLA_A3996YPANGOLA_A3999YPANGOLA_A3992YPANGOLA_A3993
YPES214092 YPO3489YPO3498YPO3495YPO3494YPO3493YPO3490YPO3497YPO3496
YPES187410 Y0695Y0686Y0689Y0690Y0691Y0694Y0687Y0688
YENT393305 YE0439YE0432YE0435YE0436YE0437YE0438YE0433YE0434
XORY360094 XOOORF_3575XOOORF_3572XOOORF_3571XOOORF_3570XOOORF_3569XOOORF_3574XOOORF_3573
XORY342109 XOO3053XOO3050XOO3049XOO3048XOO3047XOO3052XOO3051
XORY291331 XOO3221XOO3217XOO3216XOO3215XOO3214XOO3219XOO3218
XFAS405440 XFASM12_0201XFASM12_0204XFASM12_0205XFASM12_0206XFASM12_0207XFASM12_0202XFASM12_0203
XFAS183190 PD_0192PD_0195PD_0196PD_0197PD_0198PD_0193PD_0194
XFAS160492 XF0233XF0236XF0237XF0238XF0239XF0234XF0235
XCAM487884 XCC-B100_1647XCC-B100_1650XCC-B100_1651XCC-B100_1652XCC-B100_1653XCC-B100_1648XCC-B100_1649
XCAM316273 XCAORF_2842XCAORF_2839XCAORF_2838XCAORF_2837XCAORF_2836XCAORF_2841XCAORF_2840
XCAM314565 XC_1603XC_1606XC_1607XC_1608XC_1609XC_1604XC_1605
XCAM190485 XCC2513XCC2510XCC2509XCC2508XCC2507XCC2512XCC2511
XAXO190486 XAC2689XAC2686XAC2685XAC2684XAC2683XAC2688XAC2687
XAUT78245 XAUT_0296XAUT_0292XAUT_0291XAUT_0289XAUT_0288XAUT_0295XAUT_0293
VVUL216895 VV1_1709VV1_1694VV1_1697VV1_1698VV1_1701VV1_1708VV1_1695VV1_1696
VVUL196600 VV2696VV2710VV2707VV2706VV2705VV2697VV2709VV2708
VPAR223926 VP2451VP2458VP2455VP2454VP2453VP2452VP2457VP2456
VFIS312309 VF0491VF0484VF0487VF0488VF0489VF0490VF0485VF0486
VCHO345073 VC0395_A0179VC0395_A0172VC0395_A0175VC0395_A0176VC0395_A0177VC0395_A0178VC0395_A0173VC0395_A0174
VCHO VC0648VC0641VC0644VC0645VC0646VC0647VC0642VC0643
TTUR377629 TERTU_3219TERTU_3216TERTU_3215TERTU_3214TERTU_3213TERTU_3218TERTU_3217
TTEN273068 TTE1397TTE1392TTE1390TTE1388TTE1387TTE1396TTE1393
TSP1755 TETH514_1649TETH514_1644TETH514_1642TETH514_1640TETH514_1639TETH514_1648TETH514_1645
TPSE340099 TETH39_1213TETH39_1208TETH39_1206TETH39_1204TETH39_1203TETH39_1212TETH39_1209
TDEN292415 TBD_0699TBD_0696TBD_0695TBD_0694TBD_0693TBD_0698TBD_0697
TCRU317025 TCR_1121TCR_1124TCR_1125TCR_1128TCR_1129TCR_1122TCR_1123
SWOL335541 SWOL_0896SWOL_0901SWOL_0903SWOL_0905SWOL_0906SWOL_0897SWOL_0900
STYP99287 STM3281STM3288STM3285STM3284STM3283STM3282STM3287STM3286
STHE299768 STR0340STR0345STR0995STR0154STR0081STR0341STR0344
STHE292459 STH1518STH1523STH1525STH1528STH1531STH1519STH1522
STHE264199 STU0340STU0345STU0995STU0154STU0081STU0341STU0344
SSP94122 SHEWANA3_1036SHEWANA3_1028SHEWANA3_1031SHEWANA3_1032SHEWANA3_1033SHEWANA3_1035SHEWANA3_1029SHEWANA3_1030
SSON300269 SSO_3309SSO_3316SSO_3313SSO_3312SSO_3311SSO_3310SSO_3315SSO_3314
SSED425104 SSED_3383SSED_3391SSED_3388SSED_3387SSED_3386SSED_3384SSED_3390SSED_3389
SSAP342451 SSP1503SSP1495SSP1494SSP1492SSP1491SSP1502SSP1499
SPRO399741 SPRO_0494SPRO_0487SPRO_0490SPRO_0491SPRO_0492SPRO_0493SPRO_0488SPRO_0489
SPNE488221 SP70585_0612SP70585_0617SP70585_1260SP70585_1667SP70585_0652SP70585_0613SP70585_0616
SPNE487214 SPH_0649SPH_0654SPH_1328SPH_1739SPH_0686SPH_0650SPH_0653
SPNE487213 SPT_0582SPT_0587SPT_1016SPT_1565SPT_0617SPT_0583SPT_0586
SPNE171101 SPR0477SPR0482SPR1092SPR1467SPR0516SPR0478SPR0481
SPNE1313 SPJ_0512SPJ_0517SPJ_1128SPJ_1521SPJ_0542SPJ_0513SPJ_0516
SPEA398579 SPEA_3054SPEA_3062SPEA_3059SPEA_3058SPEA_3057SPEA_3055SPEA_3061SPEA_3060
SONE211586 SO_1210SO_1202SO_1205SO_1206SO_1207SO_1209SO_1203SO_1204
SMUT210007 SMU_417SMU_422SMU_1144SMU_154SMU_155SMU_418SMU_421
SLOI323850 SHEW_2821SHEW_2829SHEW_2826SHEW_2825SHEW_2824SHEW_2822SHEW_2828SHEW_2827
SHIGELLA YHBMYHBCRBFATRUBRPSOPNPNUSAINFB
SHAL458817 SHAL_3141SHAL_3149SHAL_3146SHAL_3145SHAL_3144SHAL_3142SHAL_3148SHAL_3147
SHAE279808 SH1649SH1644SH1642SH1640SH1639SH1648SH1645
SGLO343509 SG0382SG0375SG0378SG0379SG0380SG0381SG0376SG0377
SFUM335543 SFUM_4054SFUM_1226SFUM_1230SFUM_1232SFUM_1233SFUM_1234SFUM_1227SFUM_1228
SFLE373384 SFV_3193SFV_3200SFV_3197SFV_3196SFV_3195SFV_3194SFV_3199SFV_3198
SFLE198214 AAN44671.1AAN44678.1AAN44675.1AAN44674.1AAN44673.1AAN44672.1AAN44677.1AAN44676.1
SEPI176280 SE_0941SE_0947SE_0948SE_0950SE_0951SE_0942SE_0945
SEPI176279 SERP0832SERP0837SERP0838SERP0840SERP0841SERP0833SERP0836
SENT454169 SEHA_C3574SEHA_C3583SEHA_C3580SEHA_C3579SEHA_C3577SEHA_C3575SEHA_C3582SEHA_C3581
SENT321314 SCH_3222SCH_3229SCH_3226SCH_3225SCH_3224SCH_3223SCH_3228SCH_3227
SENT295319 SPA3148SPA3156SPA3153SPA3152SPA3151SPA3149SPA3155SPA3154
SENT220341 STY3462STY3469STY3466STY3465STY3464STY3463STY3468STY3467
SENT209261 T3199T3206T3203T3202T3201T3200T3205T3204
SDYS300267 SDY_3342SDY_3349SDY_3346SDY_3345SDY_3344SDY_3343SDY_3348SDY_3347
SDEN318161 SDEN_1020SDEN_1005SDEN_1008SDEN_1009SDEN_1010SDEN_1019SDEN_1006SDEN_1007
SDEG203122 SDE_2710SDE_2707SDE_2706SDE_2705SDE_2704SDE_2709SDE_2708
SBOY300268 SBO_3219SBO_3212SBO_3215SBO_3216SBO_3217SBO_3218SBO_3213SBO_3214
SBAL402882 SHEW185_3274SHEW185_3282SHEW185_3279SHEW185_3278SHEW185_3277SHEW185_3275SHEW185_3281SHEW185_3280
SBAL399599 SBAL195_3411SBAL195_3419SBAL195_3416SBAL195_3415SBAL195_3414SBAL195_3412SBAL195_3418SBAL195_3417
SAUR93062 SACOL1284SACOL1289SACOL1290SACOL1292SACOL1293SACOL1285SACOL1288
SAUR93061 SAOUHSC_01242SAOUHSC_01247SAOUHSC_01248SAOUHSC_01250SAOUHSC_01251SAOUHSC_01243SAOUHSC_01246
SAUR426430 NWMN_1175NWMN_1179NWMN_1180NWMN_1182NWMN_1183NWMN_1176NWMN_1178
SAUR418127 SAHV_1255SAHV_1260SAHV_1261SAHV_1263SAHV_1264SAHV_1256SAHV_1259
SAUR367830 SAUSA300_1158SAUSA300_1163SAUSA300_1164SAUSA300_1166SAUSA300_1167SAUSA300_1159SAUSA300_1162
SAUR359787 SAURJH1_1351SAURJH1_1356SAURJH1_1357SAURJH1_1359SAURJH1_1360SAURJH1_1352SAURJH1_1355
SAUR359786 SAURJH9_1325SAURJH9_1330SAURJH9_1331SAURJH9_1333SAURJH9_1334SAURJH9_1326SAURJH9_1329
SAUR282459 SAS1199SAS1204SAS1205SAS1207SAS1208SAS1200SAS1203
SAUR282458 SAR1241SAR1246SAR1247SAR1249SAR1250SAR1242SAR1245
SAUR273036 SAB1127SAB1132SAB1133SAB1135SAB1136SAB1128SAB1131
SAUR196620 MW1148MW1153MW1154MW1156MW1157MW1149MW1152
SAUR158879 SA1108SA1113SA1114SA1116SA1117SA1109SA1112
SAUR158878 SAV1265SAV1270SAV1271SAV1273SAV1274SAV1266SAV1269
SACI56780 SYN_01414SYN_01790SYN_01785SYN_01783SYN_01782SYN_01780SYN_01789SYN_01787
RSOL267608 RSC1287RSC1290RSC1291RSC2069RSC2067RSC1288RSC1289
RMET266264 RMET_2033RMET_2030RMET_2029RMET_0921RMET_0923RMET_2032RMET_2031
RLEG216596 RL2952RL0128RL0123RL0121RL0120RL0127RL0125
REUT381666 H16_A2308H16_A2305H16_A2304H16_A1044H16_A1045H16_A2307H16_A2306
REUT264198 REUT_A2030REUT_A2027REUT_A2026REUT_A0956REUT_A0957REUT_A2029REUT_A2028
PTHE370438 PTH_1265PTH_1270PTH_1272PTH_1274PTH_1275PTH_1266PTH_1269
PSYR223283 PSPTO_4492PSPTO_4489PSPTO_4488PSPTO_4487PSPTO_4486PSPTO_4491PSPTO_4490
PSYR205918 PSYR_4182PSYR_4179PSYR_4178PSYR_4177PSYR_4176PSYR_4181PSYR_4180
PSTU379731 PST_3312PST_3309PST_3308PST_3307PST_3306PST_3311PST_3310
PSP56811 PSYCPRWF_0155PSYCPRWF_0158PSYCPRWF_0159PSYCPRWF_0163PSYCPRWF_0164PSYCPRWF_0156PSYCPRWF_0157
PSP312153 PNUC_1229PNUC_1226PNUC_1225PNUC_1056PNUC_1055PNUC_1228PNUC_1227
PPUT76869 PPUTGB1_4714PPUTGB1_4711PPUTGB1_4710PPUTGB1_4709PPUTGB1_4707PPUTGB1_4713PPUTGB1_4712
PPUT351746 PPUT_4579PPUT_4576PPUT_4575PPUT_4574PPUT_4573PPUT_4578PPUT_4577
PPUT160488 PP_4714PP_4711PP_4710PP_4709PP_4708PP_4713PP_4712
PPRO298386 PBPRA0617PBPRA0610PBPRA0613PBPRA0614PBPRA0615PBPRA0616PBPRA0611PBPRA0612
PMUL272843 PM1113PM0761PM0757PM0756PM0301PM1114PM0760PM0759
PMEN399739 PMEN_3610PMEN_3607PMEN_3606PMEN_3605PMEN_3604PMEN_3609PMEN_3608
PLUM243265 PLU4524PLU4531PLU4528PLU4527PLU4526PLU4525PLU4530PLU4529
PING357804 PING_2210PING_0815PING_0818PING_0819PING_0824PING_0825PING_0816PING_0817
PHAL326442 PSHAA1002PSHAA0995PSHAA0998PSHAA0999PSHAA1000PSHAA1001PSHAA0996PSHAA0997
PFLU220664 PFL_0842PFL_0845PFL_0846PFL_0847PFL_0848PFL_0843PFL_0844
PFLU216595 PFLU5255PFLU5252PFLU5251PFLU5250PFLU5249PFLU5254PFLU5253
PFLU205922 PFL_0777PFL_0780PFL_0781PFL_0782PFL_0783PFL_0778PFL_0779
PENT384676 PSEEN0793PSEEN0796PSEEN0797PSEEN0798PSEEN0799PSEEN0794PSEEN0795
PCRY335284 PCRYO_0072PCRYO_0075PCRYO_0076PCRYO_0079PCRYO_0080PCRYO_0073PCRYO_0074
PCAR338963 PCAR_1552PCAR_1557PCAR_1559PCAR_1560PCAR_1561PCAR_1553PCAR_1555
PATL342610 PATL_0791PATL_1693PATL_1696PATL_1697PATL_1698PATL_1632PATL_1694PATL_1695
PARC259536 PSYC_0067PSYC_0070PSYC_0071PSYC_0073PSYC_0074PSYC_0068PSYC_0069
PAER208964 PA4746PA4743PA4742PA4741PA4740PA4745PA4744
PAER208963 PA14_62780PA14_62740PA14_62730PA14_62720PA14_62710PA14_62770PA14_62760
OIHE221109 OB1594OB1600OB1601OB1603OB1604OB1595OB1598
NOCE323261 NOC_2122NOC_2119NOC_2118NOC_2117NOC_2116NOC_2121NOC_2120
NMUL323848 NMUL_A1866NMUL_A1863NMUL_A1862NMUL_A2554NMUL_A2553NMUL_A1865NMUL_A1864
NMEN374833 NMCC_1222NMCC_1541NMCC_1285NMCC_1286NMCC_0556NMCC_0722NMCC_1542NMCC_1543
NMEN272831 NMC1246NMC1555NMC1308NMC1309NMC0552NMC0710NMC1556NMC1557
NMEN122587 NMA1523NMA1895NMA1586NMA1588NMA0815NMA0969NMA1896NMA1897
NMEN122586 NMB_1309NMB_1641NMB_1373NMB_1374NMB_0609NMB_0758NMB_1642NMB_1643
NGON242231 NGO0595NGO1284NGO0644NGO0642NGO0191NGO0335NGO1285NGO1286
NEUT335283 NEUT_1648NEUT_1645NEUT_1644NEUT_2156NEUT_2157NEUT_1647NEUT_1646
NEUR228410 NE0759NE0762NE0763NE0173NE0172NE0760NE0761
MXAN246197 MXAN_2065MXAN_2070MXAN_2071MXAN_2072MXAN_2073MXAN_2066MXAN_2068
MTHE264732 MOTH_1046MOTH_1051MOTH_1053MOTH_1055MOTH_1056MOTH_1047MOTH_1050
MSUC221988 MS0494MS1446MS1442MS1441MS0699MS0493MS1445MS1444
MSP400668 MMWYL1_1025MMWYL1_1028MMWYL1_1029MMWYL1_1030MMWYL1_1031MMWYL1_1026MMWYL1_1027
MPET420662 MPE_A1923MPE_A1920MPE_A1919MPE_A1398MPE_A1399MPE_A1922MPE_A1921
MMAG342108 AMB4074AMB4070AMB4115AMB4116AMB4117AMB4073AMB4071
MLOT266835 MLL2209MLR5550MLR5557MLR5558MSR5561MLR5562MLR5551MLR5554
MFLA265072 MFLA_0065MFLA_0068MFLA_0069MFLA_0070MFLA_0071MFLA_0066MFLA_0067
MEXT419610 MEXT_2700MEXT_2696MEXT_2695MEXT_4028MEXT_4027MEXT_2699MEXT_2697
MCAP243233 MCA_1317MCA_1314MCA_1313MCA_1310MCA_1309MCA_1316MCA_1315
MAQU351348 MAQU_3350MAQU_3347MAQU_3346MAQU_3345MAQU_3344MAQU_3349MAQU_3348
LWEL386043 LWE1336LWE1342LWE1343LWE1345LWE1346LWE1337LWE1340
LSPH444177 BSPH_1594BSPH_1600BSPH_1601BSPH_1603BSPH_1606BSPH_1595BSPH_1598
LPNE400673 LPC_3059LPC_3056LPC_3055LPC_3054LPC_3053LPC_3058LPC_3057
LPNE297246 LPP2822LPP2819LPP2818LPP2817LPP2816LPP2821LPP2820
LPNE297245 LPL2691LPL2688LPL2687LPL2686LPL2685LPL2690LPL2689
LPNE272624 LPG2774LPG2771LPG2770LPG2769LPG2768LPG2773LPG2772
LMON265669 LMOF2365_1338LMOF2365_1344LMOF2365_1345LMOF2365_1347LMOF2365_1348LMOF2365_1339LMOF2365_1342
LMON169963 LMO1321LMO1327LMO1328LMO1330LMO1331LMO1322LMO1325
LINN272626 LIN1358LIN1364LIN1365LIN1367LIN1368LIN1359LIN1362
LCHO395495 LCHO_1699LCHO_1702LCHO_1703LCHO_1496LCHO_1497LCHO_1700LCHO_1701
KPNE272620 GKPORF_B2904GKPORF_B2912GKPORF_B2909GKPORF_B2908GKPORF_B2907GKPORF_B2905GKPORF_B2911GKPORF_B2910
JSP375286 MMA_2497MMA_2494MMA_2493MMA_1458MMA_1459MMA_2496MMA_2495
ILOI283942 IL0963IL0970IL0967IL0966IL0965IL0964IL0969IL0968
HSOM228400 HSM_1288HSM_1291HSM_1292HSM_0776HSM_1114HSM_1289HSM_1290
HSOM205914 HS_0819HS_0822HS_0823HS_0477HS_0703HS_0820HS_0821
HMOD498761 HM1_2309HM1_2315HM1_2317HM1_2321HM1_2322HM1_2310HM1_2314
HINF71421 HI_0230HI_1282HI_1288HI_1289HI_1468HI_0229HI_1283HI_1284
HINF374930 CGSHIEE_01925CGSHIEE_04150CGSHIEE_04185CGSHIEE_04190CGSHIEE_04970CGSHIEE_01930CGSHIEE_04155CGSHIEE_04160
HINF281310 NTHI0335NTHI1846NTHI1835NTHI1834NTHI1652NTHI0334NTHI1845NTHI1844
HHAL349124 HHAL_1751HHAL_1748HHAL_1747HHAL_1746HHAL_1745HHAL_1750HHAL_1749
HDUC233412 HD_1589HD_1463HD_1460HD_1459HD_1738HD_1588HD_1462HD_1461
HCHE349521 HCH_01237HCH_01240HCH_01241HCH_01243HCH_01244HCH_01238HCH_01239
HARS204773 HEAR2435HEAR2432HEAR2431HEAR1830HEAR1829HEAR2434HEAR2433
GURA351605 GURA_2937GURA_1898GURA_1902GURA_1904GURA_1905GURA_1906GURA_1899GURA_1901
GTHE420246 GTNG_1113GTNG_1119GTNG_1120GTNG_1122GTNG_1123GTNG_1114GTNG_1117
GSUL243231 GSU_1166GSU_1585GSU_1589GSU_1591GSU_1592GSU_1593GSU_1586GSU_1588
GMET269799 GMET_1583GMET_1587GMET_1589GMET_1590GMET_1591GMET_1584GMET_1586
GKAU235909 GK1259GK1265GK1266GK1268GK1269GK1260GK1263
FTUL458234 FTA_1918FTA_1915FTA_0588FTA_1622FTA_1621FTA_1917FTA_1916
FTUL418136 FTW_0124FTW_0127FTW_0373FTW_1545FTW_1544FTW_0125FTW_0126
FTUL401614 FTN_1662FTN_1659FTN_1462FTN_0608FTN_0609FTN_1661FTN_1660
FTUL393115 FTF0048FTF0051FTF1554CFTF0698FTF0699FTF0049FTF0050
FTUL393011 FTH_1748FTH_1745FTH_0556FTH_1488FTH_1487FTH_1747FTH_1746
FTUL351581 FTL_1811FTL_1808FTL_0555FTL_1538FTL_1537FTL_1810FTL_1809
FRANT FT.0048RBFATRUBRPSOPNPNUSAINFB
FPHI484022 FPHI_0946FPHI_0949FPHI_1212FPHI_0233FPHI_0232FPHI_0947FPHI_0948
ESP42895 ENT638_3600ENT638_3607ENT638_3604ENT638_3603ENT638_3602ENT638_3601ENT638_3606ENT638_3605
EFER585054 EFER_3142EFER_3149EFER_3146EFER_3145EFER_3144EFER_3143EFER_3148EFER_3147
EFAE226185 EF_1270EF_1275EF_1294EF_3065EF_3064EF_1271EF_1274
ECOO157 YHBMYHBCRBFATRUBRPSOPNPNUSAINFB
ECOL83334 ECS4044ECS4051ECS4048ECS4047ECS4046ECS4045ECS4050ECS4049
ECOL585397 ECED1_3823ECED1_3830ECED1_3827ECED1_3826ECED1_3825ECED1_3824ECED1_3829ECED1_3828
ECOL585057 ECIAI39_3660ECIAI39_3667ECIAI39_3664ECIAI39_3663ECIAI39_3662ECIAI39_3661ECIAI39_3666ECIAI39_3665
ECOL585056 ECUMN_3645ECUMN_3652ECUMN_3649ECUMN_3648ECUMN_3647ECUMN_3646ECUMN_3651ECUMN_3650
ECOL585055 EC55989_3583EC55989_3590EC55989_3587EC55989_3586EC55989_3585EC55989_3584EC55989_3589EC55989_3588
ECOL585035 ECS88_3547ECS88_3554ECS88_3551ECS88_3550ECS88_3549ECS88_3548ECS88_3553ECS88_3552
ECOL585034 ECIAI1_3313ECIAI1_3320ECIAI1_3317ECIAI1_3316ECIAI1_3315ECIAI1_3314ECIAI1_3319ECIAI1_3318
ECOL481805 ECOLC_0535ECOLC_0528ECOLC_0531ECOLC_0532ECOLC_0533ECOLC_0534ECOLC_0529ECOLC_0530
ECOL469008 ECBD_0577ECBD_0570ECBD_0573ECBD_0574ECBD_0575ECBD_0576ECBD_0571ECBD_0572
ECOL439855 ECSMS35_3459ECSMS35_3466ECSMS35_3463ECSMS35_3462ECSMS35_3461ECSMS35_3460ECSMS35_3465ECSMS35_3464
ECOL413997 ECB_03030ECB_03037ECB_03034ECB_03033ECB_03032ECB_03031ECB_03036ECB_03035
ECOL409438 ECSE_3449ECSE_3456ECSE_3453ECSE_3452ECSE_3451ECSE_3450ECSE_3455ECSE_3454
ECOL405955 APECO1_3267APECO1_3260APECO1_3263APECO1_3264APECO1_3265APECO1_3266APECO1_3261APECO1_3262
ECOL364106 UTI89_C3592UTI89_C3601UTI89_C3597UTI89_C3596UTI89_C3595UTI89_C3594UTI89_C3600UTI89_C3598
ECOL362663 ECP_3251ECP_3258ECP_3255ECP_3254ECP_3253ECP_3252ECP_3257ECP_3256
ECOL331111 ECE24377A_3645ECE24377A_3655ECE24377A_3651ECE24377A_3650ECE24377A_3649ECE24377A_3647ECE24377A_3653ECE24377A_3652
ECOL316407 ECK3151:JW3132:B3163ECK3159:JW5533:B3170ECK3156:JW3136:B3167ECK3155:JW3135:B3166ECK3154:JW3134:B3165ECK3152:JW5851:B3164ECK3158:JW3138:B3169ECK3157:JW3137:B3168
ECOL199310 C3918C3927C3923C3922C3921C3920C3926C3924
ECAR218491 ECA0717ECA0710ECA0713ECA0714ECA0715ECA0716ECA0711ECA0712
DRED349161 DRED_1961DRED_1956DRED_1954DRED_1951DRED_1950DRED_1960DRED_1957
DPSY177439 DP2615DP2612DP2610DP2609DP2608DP2614DP2613
DOLE96561 DOLE_3037DOLE_3033DOLE_3031DOLE_3030DOLE_3029DOLE_3036DOLE_3035
DNOD246195 DNO_0031DNO_0028DNO_0027DNO_1048DNO_1047DNO_0030DNO_0029
DHAF138119 DSY2521DSY2516DSY2514DSY2512DSY2509DSY2520DSY2517
DARO159087 DARO_2454DARO_2451DARO_2450DARO_2449DARO_2448DARO_2453DARO_2452
CVIO243365 CV_1460CV_1463CV_1464CV_1465CV_1466CV_1461CV_1462
CVES412965 COSY_0057COSY_0060COSY_0061COSY_0279COSY_0426COSY_0058COSY_0059
CSAL290398 CSAL_3076CSAL_3073CSAL_3072CSAL_3071CSAL_3070CSAL_3075CSAL_3074
CRUT413404 RMAG_0052RMAG_0055RMAG_0056RMAG_0293RMAG_0461RMAG_0053RMAG_0054
CPSY167879 CPS_2208CPS_2201CPS_2204CPS_2205CPS_2206CPS_2207CPS_2202CPS_2203
CJAP155077 CJA_0434CJA_0437CJA_0438CJA_0439CJA_0440CJA_0435CJA_0436
CDIF272563 CD1306CD1310CD1314CD1316CD1318CD1307CD1309
CBUR434922 COXBU7E912_0561COXBU7E912_0564COXBU7E912_0565COXBU7E912_0916COXBU7E912_0917COXBU7E912_0562COXBU7E912_0563
CBUR360115 COXBURSA331_A1602COXBURSA331_A1599COXBURSA331_A1598COXBURSA331_A1099COXBURSA331_A1098COXBURSA331_A1601COXBURSA331_A1600
CBUR227377 CBU_1434CBU_1431CBU_1430CBU_0851CBU_0852CBU_1433CBU_1432
BWEI315730 BCERKBAB4_3639BCERKBAB4_3633BCERKBAB4_3632BCERKBAB4_3630BCERKBAB4_3629BCERKBAB4_3638BCERKBAB4_3635
BVIE269482 BCEP1808_1464BCEP1808_1467BCEP1808_1468BCEP1808_2339BCEP1808_2338BCEP1808_1465BCEP1808_1466
BTHU412694 BALH_3445BALH_3439BALH_3438BALH_3436BALH_3435BALH_3444BALH_3441
BTHU281309 BT9727_3558BT9727_3552BT9727_3551BT9727_3549BT9727_3548BT9727_3557BT9727_3554
BTHA271848 BTH_I2566BTH_I2563BTH_I2562BTH_I1055BTH_I1056BTH_I2565BTH_I2564
BSUI470137 BSUIS_B0956BSUIS_A1999BSUIS_A2004BSUIS_A2005BSUIS_A2006BSUIS_A2000BSUIS_A2002
BSUI204722 BR_A0964BR_2162BR_2167BR_2168BR_2169BR_2163BR_2165
BSUB BSU16590BSU16650BSU16660BSU16680BSU16690BSU16600BSU16630
BSP376 BRADO4659BRADO0050BRADO0055BRADO0056BRADO0057BRADO0051BRADO0053
BSP36773 BCEP18194_A4639BCEP18194_A4642BCEP18194_A4643BCEP18194_A5582BCEP18194_A5581BCEP18194_A4640BCEP18194_A4641
BPUM315750 BPUM_1562BPUM_1568BPUM_1569BPUM_1571BPUM_1572BPUM_1563BPUM_1566
BPSE320373 BURPS668_1738BURPS668_1741BURPS668_1742BURPS668_1284BURPS668_1285BURPS668_1739BURPS668_1740
BPSE320372 BURPS1710B_A2072BURPS1710B_A2075BURPS1710B_A2076BURPS1710B_A1511BURPS1710B_A1513BURPS1710B_A2073BURPS1710B_A2074
BPSE272560 BPSL1920BPSL1917BPSL1916BPSL1206BPSL1207BPSL1919BPSL1918
BPET94624 BPET3135BPET3132BPET3131BPET1609BPET1610BPET3134BPET3133
BPER257313 BP1245BP1248BP1249BP0794BP0795BP1246BP1247
BPAR257311 BPP1860BPP1863BPP1864BPP3432BPP3431BPP1861BPP1862
BOVI236 GBOORFA0993GBOORF2152GBOORF2157GBOORF2158GBOORF2160GBOORF2153GBOORF2155
BMEL359391 BAB2_0271BAB1_2162BAB1_2167BAB1_2168BAB1_2169BAB1_2163BAB1_2165
BMEL224914 BMEII0334BMEI1968BMEI1963BMEI1962BMEI1961BMEI1967BMEI1965
BMAL320389 BMA10247_0989BMA10247_0992BMA10247_0993BMA10247_0407BMA10247_0408BMA10247_0990BMA10247_0991
BMAL320388 BMASAVP1_A1509BMASAVP1_A1506BMASAVP1_A1505BMASAVP1_A1124BMASAVP1_A1125BMASAVP1_A1508BMASAVP1_A1507
BMAL243160 BMA_1063BMA_1060BMA_1059BMA_1835BMA_1834BMA_1062BMA_1061
BLIC279010 BL01228BL01221BL01222BL01219BL01217BL01227BL01224
BJAP224911 BLR4580BLL0786BLL0781BSL0780BLL0779BLL0785BLL0783
BHAL272558 BH2417BH2411BH2410BH2408BH2407BH2416BH2413
BCLA66692 ABC2232ABC2226ABC2225ABC2223ABC2222ABC2231ABC2228
BCER572264 BCA_3913BCA_3907BCA_3906BCA_3904BCA_3903BCA_3912BCA_3909
BCER405917 BCE_3855BCE_3849BCE_3848BCE_3846BCE_3845BCE_3854BCE_3851
BCER315749 BCER98_2469BCER98_2463BCER98_2462BCER98_2460BCER98_2459BCER98_2468BCER98_2465
BCER288681 BCE33L3576BCE33L3570BCE33L3569BCE33L3567BCE33L3566BCE33L3575BCE33L3572
BCEN331272 BCEN2424_1498BCEN2424_1501BCEN2424_1502BCEN2424_2254BCEN2424_2253BCEN2424_1499BCEN2424_1500
BCEN331271 BCEN_1018BCEN_1021BCEN_1022BCEN_1642BCEN_1641BCEN_1019BCEN_1020
BCAN483179 BCAN_B0985BCAN_A2204BCAN_A2209BCAN_A2210BCAN_A2211BCAN_A2205BCAN_A2207
BBRO257310 BB3248BB3245BB3244BB3882BB3881BB3247BB3246
BBAC264462 BD1545BD1548BD1549BD1550BD1551BD1546BD1547
BANT568206 BAMEG_0677BAMEG_0683BAMEG_0684BAMEG_0686BAMEG_0687BAMEG_0678BAMEG_0681
BANT261594 GBAA3954GBAA3948GBAA3947GBAA3945GBAA3944GBAA3953GBAA3950
BANT260799 BAS3668BAS3662BAS3661BAS3659BAS3658BAS3667BAS3664
BAMY326423 RBAM_016430RBAM_016490RBAM_016500RBAM_016520RBAM_016530RBAM_016440RBAM_016470
BAMB398577 BAMMC406_1420BAMMC406_1423BAMMC406_1424BAMMC406_2171BAMMC406_2170BAMMC406_1421BAMMC406_1422
BAMB339670 BAMB_1380BAMB_1383BAMB_1384BAMB_2292BAMB_2291BAMB_1381BAMB_1382
BABO262698 BRUAB2_0269BRUAB1_2135BRUAB1_2140BRUAB1_2141BRUAB1_2142BRUAB1_2136BRUAB1_2138
ASP76114 EBA5838EBA5842EBA5843EBA5844EBA5846EBA5840EBA5841
ASP62977 ACIAD0367ACIAD0370ACIAD3307ACIAD0401ACIAD0402ACIAD0368ACIAD0369
ASP62928 AZO2109AZO2106AZO2105AZO2104AZO2103AZO2108AZO2107
ASAL382245 ASA_2619ASA_1008ASA_1011ASA_1012ASA_1013ASA_1014ASA_1009ASA_1010
APLE434271 APJL_0569APJL_0628APJL_0631APJL_0632APJL_1023APJL_0570APJL_0629APJL_0630
APLE416269 APL_0576APL_0637APL_0640APL_0641APL_1005APL_0577APL_0638APL_0639
AORE350688 CLOS_1524CLOS_1529CLOS_1531CLOS_1533CLOS_1534CLOS_1525CLOS_1528
AMET293826 AMET_2677AMET_2672AMET_2670AMET_2668AMET_1006AMET_2676AMET_2673
AHYD196024 AHA_1740AHA_3305AHA_3302AHA_3301AHA_3300AHA_3299AHA_3304AHA_3303
AEHR187272 MLG_1950MLG_1947MLG_1946MLG_1945MLG_1944MLG_1949MLG_1948
ADEH290397 ADEH_1099ADEH_1104ADEH_1105ADEH_1106ADEH_1107ADEH_1100ADEH_1102
ACRY349163 ACRY_0222ACRY_0226ACRY_0441ACRY_0442ACRY_0369ACRY_0223ACRY_0225
ABOR393595 ABO_0327ABO_0330ABO_0331ABO_0332ABO_0333ABO_0328ABO_0329
ABAU360910 BAV2396BAV2393BAV2392BAV2668BAV2667BAV2395BAV2394
ABAC204669 ACID345_4728ACID345_4219ACID345_2203ACID345_1994ACID345_1995ACID345_4218ACID345_4217


Organism features enriched in list (features available for 256 out of the 271 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.00015461517
Arrangment:Pairs 8.996e-874112
Disease:Bubonic_plague 0.006934466
Disease:Dysentery 0.006934466
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00010351111
Endospores:No 5.236e-960211
GC_Content_Range4:0-40 2.842e-765213
GC_Content_Range4:40-60 4.016e-9132224
GC_Content_Range7:0-30 1.404e-11147
GC_Content_Range7:50-60 1.030e-975107
Genome_Size_Range5:0-2 1.957e-2318155
Genome_Size_Range5:4-6 1.464e-11118184
Genome_Size_Range9:0-1 2.328e-6127
Genome_Size_Range9:1-2 8.666e-1717128
Genome_Size_Range9:4-5 0.00016575896
Genome_Size_Range9:5-6 4.067e-76088
Genome_Size_Range9:6-8 0.00662092438
Gram_Stain:Gram_Neg 7.587e-12186333
Gram_Stain:Gram_Pos 0.002249352150
Habitat:Specialized 0.00119541353
Motility:No 0.000312549151
Motility:Yes 0.0000123142267
Optimal_temp.:30-37 6.414e-61718
Optimal_temp.:35-37 0.00001891313
Optimal_temp.:37 0.002091234106
Oxygen_Req:Anaerobic 0.000013126102
Oxygen_Req:Facultative 5.959e-10123201
Pathogenic_in:Animal 0.00012304366
Pathogenic_in:Human 0.0011953110213
Pathogenic_in:No 1.139e-672226
Salinity:Non-halophilic 0.006327036106
Shape:Coccobacillus 0.00010351111
Shape:Rod 5.317e-10188347
Shape:Sphere 0.0015574219
Shape:Spiral 0.0000333434
Temp._range:Hyperthermophilic 0.0000227123
Temp._range:Mesophilic 0.0014541221473
Temp._range:Psychrophilic 0.000560299



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 113
Effective number of orgs (counting one per cluster within 468 clusters): 98

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSOL273057 ncbi Sulfolobus solfataricus P20
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
PTOR263820 ncbi Picrophilus torridus DSM 97900
PRUM264731 ncbi Prevotella ruminicola 231
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR146891 ncbi Prochlorococcus marinus AS96011
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PAST100379 Onion yellows phytoplasma1
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101521
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3811
CFET360106 ncbi Campylobacter fetus fetus 82-401
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BGAR290434 ncbi Borrelia garinii PBi1
BBUR224326 ncbi Borrelia burgdorferi B311
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB1
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40181


Names of the homologs of the genes in the group in each of these orgs
  EG12371   EG11179   EG11178   EG11177   EG10914   EG10743   EG10665   EG10505   
WSUC273121 WS2018
WPIP955 WD_1319
WPIP80849 WB_0810
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX2324
TWHI218496
TWHI203267
TVOL273116
TPEN368408
TKOD69014
TELO197221 TLL1629
TDEN326298 TMDEN_0676
TACI273075
STOK273063
SSOL273057
SMAR399550
SACI330779
RSAL288705
PTOR263820
PRUM264731 GFRORF2371
PMAR167546 P9301ORF_0130
PMAR167542 P9515ORF_0127
PMAR167540 PMM0112
PMAR146891 A9601_01301
PISL384616
PHOR70601
PGIN242619 PG_0255
PFUR186497
PDIS435591 BDI_3534
PAST100379 PAM151
PARS340102
PAER178306
PABY272844
NSEN222891
NPHA348780
NFAR247156 NFA40690
MTUB419947 MRA_2817
MTUB336982 TBFG_12806
MTHE349307
MTHE187420
MTBRV RV2793C
MTBCDC MT2862.1
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM2348
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_1793
MGEN243273
MFLO265311 MFL282
MCAP340047
MBUR259564
MBOV410289 BCG_2811C
MBOV233413 MB2816C
MBAR269797 MBAR_A2893
MAVI243243 MAV_3682
MART243272
MAEO419665
MACE188937 MA1362
KRAD266940 KRAD_1445
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544 HPAG1_0401
HPY HP1046
HMUK485914
HMAR272569
HHEP235279
HBUT415426
HACI382638 HAC_1157
CSUL444179
CMET456442
CMAQ397948
CKOR374847
CJEJ407148 C8J_0131
CJEJ360109 JJD26997_0151
CJEJ354242 CJJ81176_0173
CJEJ195099 CJE_0133
CJEJ192222 CJ0138
CJEI306537 JK1137
CHUT269798 CHU_3422
CHOM360107 CHAB381_1677
CFET360106 CFF8240_1491
BXEN266265
BTHE226186 BT_3404
BGAR290434 BG0828
BBUR224326 BB_0802
BAFZ390236 BAPKO_0855
AYEL322098 AYWB_569
AURANTIMONAS
APER272557
ALAI441768 ACL_0808
AFUL224325
ABUT367737 ABU_2045


Organism features enriched in list (features available for 106 out of the 113 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.00005197112
Arrangment:Singles 1.148e-776286
Disease:Tuberculosis 0.005871733
Endospores:No 2.087e-1777211
Endospores:Yes 0.0001810153
GC_Content_Range4:0-40 0.001226452213
GC_Content_Range7:0-30 0.00011681947
GC_Content_Range7:60-70 0.009941916134
Genome_Size_Range5:0-2 6.358e-1562155
Genome_Size_Range5:4-6 1.288e-614184
Genome_Size_Range9:0-1 1.271e-71727
Genome_Size_Range9:1-2 6.841e-845128
Genome_Size_Range9:3-4 0.0038133677
Genome_Size_Range9:5-6 1.155e-6288
Gram_Stain:Gram_Neg 1.753e-639333
Gram_Stain:Gram_Pos 0.000319614150
Habitat:Multiple 0.000012115178
Habitat:Specialized 0.00006932153
Motility:No 0.001069140151
Optimal_temp.:- 0.000992633257
Optimal_temp.:100 0.005871733
Optimal_temp.:35-40 0.005871733
Optimal_temp.:37 0.000783331106
Optimal_temp.:85 0.001042744
Oxygen_Req:Anaerobic 7.168e-737102
Oxygen_Req:Facultative 0.000320322201
Oxygen_Req:Microaerophilic 0.00027521018
Pathogenic_in:Human 0.008297929213
Pathogenic_in:Mammal 0.004295245
Salinity:Extreme_halophilic 0.002626257
Shape:Irregular_coccus 3.191e-101517
Shape:Pleomorphic 0.005775358
Shape:Rod 9.727e-1429347
Shape:Sphere 3.073e-101619
Shape:Spiral 0.00001031734
Temp._range:Hyperthermophilic 3.045e-91723
Temp._range:Mesophilic 0.000018170473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 8
Effective number of orgs (counting one per cluster within 468 clusters): 6

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
STHE299768 ncbi Streptococcus thermophilus CNRZ1066 0.00551987147
STHE264199 ncbi Streptococcus thermophilus LMG 18311 0.00568177177
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA 0.00655317327
SACI56780 ncbi Syntrophus aciditrophicus SB 0.006977511808
NGON242231 ncbi Neisseria gonorrhoeae FA 1090 0.007466311908
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00810917557
NMEN374833 ncbi Neisseria meningitidis 053442 0.008938912178
NMEN122586 ncbi Neisseria meningitidis MC58 0.009608112288


Names of the homologs of the genes in the group in each of these orgs
  EG12371   EG11179   EG11178   EG11177   EG10914   EG10743   EG10665   EG10505   
STHE299768 STR0340STR0345STR0995STR0154STR0081STR0341STR0344
STHE264199 STU0340STU0345STU0995STU0154STU0081STU0341STU0344
CVES412965 COSY_0057COSY_0060COSY_0061COSY_0279COSY_0426COSY_0058COSY_0059
SACI56780 SYN_01414SYN_01790SYN_01785SYN_01783SYN_01782SYN_01780SYN_01789SYN_01787
NGON242231 NGO0595NGO1284NGO0644NGO0642NGO0191NGO0335NGO1285NGO1286
CRUT413404 RMAG_0052RMAG_0055RMAG_0056RMAG_0293RMAG_0461RMAG_0053RMAG_0054
NMEN374833 NMCC_1222NMCC_1541NMCC_1285NMCC_1286NMCC_0556NMCC_0722NMCC_1542NMCC_1543
NMEN122586 NMB_1309NMB_1641NMB_1373NMB_1374NMB_0609NMB_0758NMB_1642NMB_1643


Organism features enriched in list (features available for 8 out of the 8 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.00735985112
Disease:Meningitis_and_septicemia 0.000969924
Optimal_temp.:45 0.000969924
Shape:Coccus 0.0018022582
Shape:Rod 0.00813581347



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181690.5035
GLYCOCAT-PWY (glycogen degradation I)2461810.4901
PWY-5386 (methylglyoxal degradation I)3052080.4879
PWY-5918 (heme biosynthesis I)2721920.4810
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861960.4652
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002020.4633
AST-PWY (arginine degradation II (AST pathway))1201080.4581
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911460.4418
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911930.4310
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901920.4274
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961940.4230
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951450.4202
PWY-1269 (CMP-KDO biosynthesis I)3252040.4059
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262040.4032
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4582540.4019



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11179   EG11178   EG11177   EG10914   EG10743   EG10665   EG10505   
EG123710.998630.9988810.9989060.9989790.9993490.9986870.998742
EG111790.999950.9999370.9998580.99980110.999989
EG111780.9999850.9998880.9997870.9999690.99999
EG111770.9999610.99990.9999650.999974
EG109140.9999910.9998650.999907
EG107430.9998180.999858
EG106650.999998
EG10505



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PAIRWISE BLAST SCORES:

  EG12371   EG11179   EG11178   EG11177   EG10914   EG10743   EG10665   EG10505   
EG123710.0f0-------
EG11179-0.0f0------
EG11178--0.0f0-----
EG11177---0.0f0----
EG10914----0.0f0---
EG10743-----0.0f0--
EG10665------0.0f0-
EG10505-------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10505 EG10665 EG10743 EG10914 EG11177 EG11178 EG11179 EG12371 (centered at EG11178)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG12371   EG11179   EG11178   EG11177   EG10914   EG10743   EG10665   EG10505   
117/623416/623409/623418/623417/623412/623419/623413/623
AAEO224324:0:Tyes118426-338-0-1280
AAUR290340:2:Tyes--037---
AAVE397945:0:Tyes--209120900120932092
ABAC204669:0:Tyes27642244-2120122432242
ABAU360910:0:Tyes-41027227132
ABOR393595:0:Tyes-0345612
ABUT367737:0:Tyes-0------
ACAU438753:0:Tyes-0-5474613
ACEL351607:0:Tyes-94-0--6
ACRY349163:8:Tyes-0422022114813
ADEH290397:0:Tyes-0567813
AEHR187272:0:Tyes-6321054
AFER243159:0:Tyes-6-21054
AHYD196024:0:Tyes01521151815171516151515201519
ALAI441768:0:Tyes-----0--
AMAR234826:0:Tyes---0-2144-
AMAR329726:9:Tyes0-12649----
AMET293826:0:Tyes-1627162216201618016261623
ANAE240017:0:Tyes-188-0---
AORE350688:0:Tyes-05791014
APHA212042:0:Tyes---306-3040-
APLE416269:0:Tyes062656643016364
APLE434271:0:Tno060636444916162
ASAL382245:5:Tyes15460345612
ASP1667:3:Tyes--07----
ASP232721:2:Tyes--155115500115531552
ASP62928:0:Tyes-6321054
ASP62977:0:Tyes-032734303112
ASP76114:2:Tyes-0345612
AVAR240292:3:Tyes633-02325-617--
AYEL322098:4:Tyes--0-----
BABO262698:0:Tno0-------
BABO262698:1:Tno-0-56713
BAFZ390236:2:Fyes--0-----
BAMB339670:3:Tno-03494294112
BAMB398577:3:Tno-03476776612
BAMY326423:0:Tyes-06791014
BANT260799:0:Tno-10431096
BANT261594:2:Tno-93-1085
BANT568206:2:Tyes-06791014
BANT592021:2:Tno-932-085
BAPH198804:0:Tyes--321054
BAPH372461:0:Tyes--32-054
BBAC264462:0:Tyes-0345612
BBAC360095:0:Tyes-0-56713
BBRO257310:0:Tyes-41065064932
BBUR224326:21:Fno--0-----
BCAN483179:0:Tno0-------
BCAN483179:1:Tno-0-56713
BCEN331271:2:Tno-03463263112
BCEN331272:3:Tyes-03475575412
BCER226900:1:Tyes-104-1096
BCER288681:0:Tno-10431096
BCER315749:1:Tyes-10431096
BCER405917:1:Tyes-10431096
BCER572264:1:Tno-10431096
BCIC186490:0:Tyes--321054
BCLA66692:0:Tyes-10431096
BFRA272559:1:Tyes3394------0
BFRA295405:0:Tno3720------0
BGAR290434:2:Fyes--0-----
BHAL272558:0:Tyes-10431096
BHEN283166:0:Tyes-8-31075
BHER314723:0:Fyes--0-2---
BJAP224911:0:Fyes38237-21064
BLIC279010:0:Tyes-06791014
BLON206672:0:Tyes--73-0---
BMAL243160:1:Tno-41068067932
BMAL320388:1:Tno-37537237101374373
BMAL320389:1:Tyes-56857157201569570
BMEL224914:0:Tno0-------
BMEL224914:1:Tno-7-21064
BMEL359391:0:Tno0-------
BMEL359391:1:Tno-0-56713
BOVI236:0:Tyes0-------
BOVI236:1:Tyes-0-56713
BPAR257311:0:Tno-0341490148912
BPER257313:0:Tyes-41842142201419420
BPET94624:0:Tyes-1541153815370115401539
BPSE272560:1:Tyes-71270970801711710
BPSE320372:1:Tno-55055355402551552
BPSE320373:1:Tno-43643944001437438
BPUM315750:0:Tyes-06791014
BQUI283165:0:Tyes-8-31075
BSP107806:2:Tyes--321054
BSP36773:2:Tyes-03496696512
BSP376:0:Tyes43750-56713
BSUB:0:Tyes-06791014
BSUI204722:0:Tyes0-------
BSUI204722:1:Tyes-0-56713
BSUI470137:0:Tno0-------
BSUI470137:1:Tno-0-56713
BTHA271848:1:Tno-1475147214710114741473
BTHE226186:0:Tyes-------0
BTHU281309:1:Tno-10431096
BTHU412694:1:Tno-10431096
BTRI382640:1:Tyes-8-31075
BTUR314724:0:Fyes--0-2---
BVIE269482:7:Tyes-03486686512
BWEI315730:4:Tyes-10431096
CABO218497:0:Tyes---0--3-
CACE272562:1:Tyes-0579-14
CAULO:0:Tyes-11-210108
CBEI290402:0:Tyes-0579-14
CBLO203907:0:Tyes--234501
CBLO291272:0:Tno--234501
CBOT36826:1:Tno-9420-85
CBOT441770:0:Tyes-9420-85
CBOT441771:0:Tno-21722167-0-21712168
CBOT441772:1:Tno-9420-85
CBOT498213:1:Tno-9420-85
CBOT508765:1:Tyes-0579-14
CBOT515621:2:Tyes-9420-85
CBOT536232:0:Tno-9420-85
CBUR227377:1:Tyes-54854554401547546
CBUR360115:1:Tno-47146846710470469
CBUR434922:2:Tno-03433733812
CCAV227941:1:Tyes---0--3-
CCHL340177:0:Tyes--0----1
CCON360104:2:Tyes-2-----0
CCUR360105:0:Tyes-0-----2
CDES477974:0:Tyes-057-1214
CDIF272563:1:Tyes-058111314
CDIP257309:0:Tyes--830---
CEFF196164:0:Fyes--50----
CFEL264202:1:Tyes---3--0-
CFET360106:0:Tyes-0------
CGLU196627:0:Tyes--8-0---
CHOM360107:1:Tyes-0------
CHUT269798:0:Tyes-------0
CHYD246194:0:Tyes-127-20118
CJAP155077:0:Tyes-0345612
CJEI306537:0:Tyes---0----
CJEJ192222:0:Tyes-0------
CJEJ195099:0:Tno-0------
CJEJ354242:2:Tyes-0------
CJEJ360109:0:Tyes-0------
CJEJ407148:0:Tno-0------
CKLU431943:1:Tyes-0579-14
CMIC31964:2:Tyes--638-0---
CMIC443906:2:Tyes--104-0---
CMUR243161:1:Tyes---0--3-
CNOV386415:0:Tyes-8420-75
CPEL335992:0:Tyes--2--40-
CPER195102:1:Tyes-9420-85
CPER195103:0:Tno-9420-85
CPER289380:3:Tyes-9420-85
CPHY357809:0:Tyes-11640-107
CPNE115711:1:Tyes---0--3-
CPNE115713:0:Tno---3--0-
CPNE138677:0:Tno---3--0-
CPNE182082:0:Tno---3--0-
CPRO264201:0:Fyes--119118-0121-
CPSY167879:0:Tyes70345612
CRUT413404:0:Tyes-03422638012
CSAL290398:0:Tyes-6321054
CSP501479:6:Fyes---5430--
CSP501479:7:Fyes-0----13
CSP78:2:Tyes-0-9101113
CTEP194439:0:Tyes1807-1--1387-0
CTET212717:0:Tyes-046--13
CTRA471472:0:Tyes---0--3-
CTRA471473:0:Tno---0--3-
CVES412965:0:Tyes-03421435112
CVIO243365:0:Tyes-0345612
DARO159087:0:Tyes-6321054
DDES207559:0:Tyes-0--6712
DETH243164:0:Tyes--1211-015-
DGEO319795:1:Tyes-825---0826-
DHAF138119:0:Tyes-127530118
DNOD246195:0:Tyes-41098398232
DOLE96561:0:Tyes-8421076
DPSY177439:2:Tyes-7421065
DRAD243230:3:Tyes-----2600-
DRED349161:0:Tyes-10531096
DSHI398580:5:Tyes-567-4803568570
DSP216389:0:Tyes--1211-015-
DSP255470:0:Tno--1211-015-
DVUL882:1:Tyes-8--1075
ECAN269484:0:Tyes-----0130-
ECAR218491:0:Tyes90346812
ECHA205920:0:Tyes-----1550-
ECOL199310:0:Tno09543286
ECOL316407:0:Tno08543176
ECOL331111:6:Tno09543286
ECOL362663:0:Tno07432165
ECOL364106:1:Tno09543286
ECOL405955:2:Tyes07432165
ECOL409438:6:Tyes07432165
ECOL413997:0:Tno07432165
ECOL439855:4:Tno07432165
ECOL469008:0:Tno70345612
ECOL481805:0:Tno70345612
ECOL585034:0:Tno08543176
ECOL585035:0:Tno08543176
ECOL585055:0:Tno08543176
ECOL585056:2:Tno08543176
ECOL585057:0:Tno08543176
ECOL585397:0:Tno08543176
ECOL83334:0:Tno07432165
ECOLI:0:Tno08543176
ECOO157:0:Tno07432165
EFAE226185:3:Tyes-05241691169014
EFER585054:1:Tyes08543176
ELIT314225:0:Tyes-0-20212224
ERUM254945:0:Tyes-----0137-
ERUM302409:0:Tno-----0131-
ESP42895:1:Tyes07432165
FALN326424:0:Tyes--420---
FJOH376686:0:Tyes------01
FMAG334413:1:Tyes--5-1086
FNOD381764:0:Tyes-0-309----
FNUC190304:0:Tyes-315-10562710314312
FPHI484022:1:Tyes-740743101710741742
FRANT:0:Tno-03141260860912
FSP106370:0:Tyes--420---
FSP1855:0:Tyes--024---
FSUC59374:0:Tyes-03----2
FTUL351581:0:Tno-11091106085985811081107
FTUL393011:0:Tno-9889850766765987986
FTUL393115:0:Tyes-03138559960012
FTUL401614:0:Tyes-104510428460110441043
FTUL418136:0:Tno-032111188118712
FTUL458234:0:Tno-10231020079479310221021
GBET391165:0:Tyes-44-2104341
GFOR411154:0:Tyes--3177---01
GKAU235909:1:Tyes-06791014
GMET269799:1:Tyes-0467813
GOXY290633:5:Tyes-04-6713
GSUL243231:0:Tyes0416420422423424417419
GTHE420246:1:Tyes-06791014
GURA351605:0:Tyes10420467813
GVIO251221:0:Tyes-346896--0--
HACI382638:1:Tyes-0------
HARS204773:0:Tyes-56756456310566565
HAUR316274:2:Tyes--46-34310-
HCHE349521:0:Tyes-0345612
HDUC233412:0:Tyes10741023610632
HHAL349124:0:Tyes-6321054
HINF281310:0:Tyes11358135113501194013571356
HINF374930:0:Tyes03773843855261378379
HINF71421:0:Tno11025103110321212010261027
HMOD498761:0:Tyes-068121315
HNEP81032:0:Tyes-04-3278327713
HPY:0:Tno-0------
HPYL357544:1:Tyes-0------
HSOM205914:1:Tyes-3413443450227342343
HSOM228400:0:Tno-5145175180343515516
ILOI283942:0:Tyes07432165
JSP290400:1:Tyes-3-40454041403920
JSP375286:0:Tyes-1050104710460110491048
KPNE272620:2:Tyes08543176
KRAD266940:2:Fyes--0-----
LACI272621:0:Tyes-610--5-
LBIF355278:2:Tyes--1-34-0
LBIF456481:2:Tno--1-34-0
LBOR355276:1:Tyes----0--3
LBOR355277:1:Tno----3--0
LBRE387344:2:Tyes-61055-52
LCAS321967:1:Tyes-720--63
LCHO395495:0:Tyes-20921221301210211
LDEL321956:0:Tyes--10--5-
LDEL390333:0:Tyes--10--5-
LGAS324831:0:Tyes-056339-1-
LHEL405566:0:Tyes-610--5-
LINN272626:1:Tno-06791014
LINT189518:1:Tyes----3--0
LINT267671:1:Tno----0--3
LINT363253:3:Tyes-----47201
LJOH257314:0:Tyes-4334284270-432-
LLAC272622:5:Tyes-05-119711661-
LLAC272623:0:Tyes-05-112310921-
LMES203120:1:Tyes-50-227-4-
LMON169963:0:Tno-06791014
LMON265669:0:Tyes-06791014
LPLA220668:0:Tyes-127081-118
LPNE272624:0:Tno-6321054
LPNE297245:1:Fno-6321054
LPNE297246:1:Fyes-6321054
LPNE400673:0:Tno-6321054
LREU557436:0:Tyes-4853540-4952
LSAK314315:0:Tyes--50--96
LSPH444177:1:Tyes-06791214
LWEL386043:0:Tyes-06791014
LXYL281090:0:Tyes---8151--0
MABS561007:1:Tyes---80---
MACE188937:0:Tyes0-------
MAER449447:0:Tyes4873-0--4402--
MAQU351348:2:Tyes-6321054
MAVI243243:0:Tyes---0----
MBAR269797:1:Tyes0-------
MBOV233413:0:Tno---0----
MBOV410289:0:Tno---0----
MCAP243233:0:Tyes-8541076
MEXT419610:0:Tyes-5101324132342
MFLA265072:0:Tyes-0345612
MFLO265311:0:Tyes---0----
MGIL350054:3:Tyes---40---
MHUN323259:0:Tyes0-------
MLEP272631:0:Tyes---4510---
MLOT266835:2:Tyes02613261726182620262126142616
MMAG342108:0:Tyes-4045464731
MMAR394221:0:Tyes-0-891013
MMAZ192952:0:Tyes0-------
MPET420662:1:Tyes-52151851701520519
MSME246196:0:Tyes---05---
MSP164756:1:Tno---04---
MSP164757:0:Tno---04---
MSP189918:2:Tyes---04---
MSP266779:3:Tyes-0-57813
MSP400668:0:Tyes-0345612
MSP409:2:Tyes-5-02228222942
MSUC221988:0:Tyes19779739722070976975
MTBCDC:0:Tno---0----
MTBRV:0:Tno---0----
MTHE264732:0:Tyes-05791014
MTUB336982:0:Tno---0----
MTUB419947:0:Tyes---0----
MVAN350058:0:Tyes---020---
MXAN246197:0:Tyes-0567813
NARO279238:0:Tyes-11--10108
NEUR228410:0:Tyes-59860160210599600
NEUT335283:2:Tyes-41050150232
NFAR247156:2:Tyes-0------
NGON242231:0:Tyes3799924254230134993994
NHAM323097:2:Tyes-0-56713
NMEN122586:0:Tno6739927367370147993994
NMEN122587:0:Tyes6451019707709014310201021
NMEN272831:0:Tno6098676676680150868869
NMEN374833:0:Tno6599757217220165976977
NMUL323848:3:Tyes-41068668532
NOCE323261:1:Tyes-6321054
NSP103690:6:Tyes4362-01486-4376--
NSP35761:1:Tyes-1511100--12
NSP387092:0:Tyes-2--712--0
NWIN323098:0:Tyes-0-56713
OANT439375:5:Tyes-7-21064
OCAR504832:0:Tyes-9-21085
OIHE221109:0:Tyes-06791014
OTSU357244:0:Fyes-0----12
PACN267747:0:Tyes--0----4
PAER208963:0:Tyes-6321054
PAER208964:0:Tno-6321054
PARC259536:0:Tyes-0346712
PAST100379:0:Tyes--0-----
PATL342610:0:Tyes0906909910912845907908
PCAR338963:0:Tyes-0578913
PCRY335284:1:Tyes-0347812
PDIS435591:0:Tyes-------0
PENT384676:0:Tyes-0345612
PFLU205922:0:Tyes-0345612
PFLU216595:1:Tyes-6321054
PFLU220664:0:Tyes-0345612
PGIN242619:0:Tyes-------0
PHAL326442:1:Tyes70345612
PING357804:0:Tyes129303491012
PINT246198:1:Tyes------10
PLUM243265:0:Fyes07432165
PLUT319225:0:Tyes--143--0-144
PMAR146891:0:Tyes--0-----
PMAR167539:0:Tyes--0--1199--
PMAR167540:0:Tyes--0-----
PMAR167542:0:Tyes--0-----
PMAR167546:0:Tyes--0-----
PMAR167555:0:Tyes--0--1499--
PMAR59920:0:Tno--685--0--
PMAR74546:0:Tyes--0--1197--
PMAR74547:0:Tyes--608--0--
PMAR93060:0:Tyes--0--1295--
PMEN399739:0:Tyes-6321054
PMOB403833:0:Tyes--1151---0-
PMUL272843:1:Tyes8124604564550813459458
PNAP365044:8:Tyes--59859701600599
PPEN278197:0:Tyes-056--14
PPRO298386:2:Tyes70345612
PPUT160488:0:Tno-6321054
PPUT351746:0:Tyes-6321054
PPUT76869:0:Tno-7432065
PRUM264731:0:Tyes-------0
PSP117:0:Tyes--0---4-
PSP296591:2:Tyes--2384083901
PSP312153:0:Tyes-17817517410177176
PSP56811:2:Tyes-0348912
PSTU379731:0:Tyes-6321054
PSYR205918:0:Tyes-6321054
PSYR223283:2:Tyes-6321054
PTHE370438:0:Tyes-05791014
RAKA293614:0:Fyes-98---09796
RALB246199:0:Tyes---8---0
RBEL336407:0:Tyes-0---16612
RBEL391896:0:Fno-0---28312
RCAN293613:0:Fyes-0---14612
RCAS383372:0:Tyes3245-30-24446-
RCON272944:0:Tno-162---0161160
RDEN375451:4:Tyes-3-24023623220
RETL347834:5:Tyes-8-31075
REUT264198:3:Tyes-1071106810670110701069
REUT381666:2:Tyes-1218121512140112171216
RFEL315456:2:Tyes0628---469627626
RFER338969:1:Tyes--64764801645646
RLEG216596:6:Tyes28448-31075
RMAS416276:1:Tyes-139---0138137
RMET266264:2:Tyes-1105110211010211041103
RPAL258594:0:Tyes-7-21064
RPAL316055:0:Tyes-7-21064
RPAL316056:0:Tyes-0-56713
RPAL316057:0:Tyes-7-21064
RPAL316058:0:Tyes-0-67813
RPOM246200:1:Tyes-3-36923695325220
RPRO272947:0:Tyes-50---04948
RRIC392021:0:Fno-157---0156155
RRIC452659:0:Tyes-160---0159158
RRUB269796:1:Tyes-0-56713
RSOL267608:1:Tyes-03480179912
RSP101510:3:Fyes-0--13---
RSP357808:0:Tyes--27842787-02781-
RSPH272943:4:Tyes-54-0345557
RSPH349101:2:Tno-54-0345557
RSPH349102:5:Tyes-0-16716416313
RTYP257363:0:Tno-52---05150
RXYL266117:0:Tyes----67-0
SACI56780:0:Tyes0776772770769767775774
SAGA205921:0:Tno-16416978201-168
SAGA208435:0:Tno-17417977601-178
SAGA211110:0:Tyes-23624185001-240
SALA317655:1:Tyes-68--016971
SARE391037:0:Tyes-051214---
SAUR158878:1:Tno-0568914
SAUR158879:1:Tno-0568914
SAUR196620:0:Tno-0568914
SAUR273036:0:Tno-0568914
SAUR282458:0:Tno-0568914
SAUR282459:0:Tno-0568914
SAUR359786:1:Tno-0568914
SAUR359787:1:Tno-0568914
SAUR367830:3:Tno-0568914
SAUR418127:0:Tyes-0568914
SAUR426430:0:Tno-0457813
SAUR93061:0:Fno-0568914
SAUR93062:1:Tno-0568914
SAVE227882:1:Fyes--25-0---
SBAL399599:3:Tyes08543176
SBAL402882:1:Tno08543176
SBOY300268:1:Tyes70345612
SCO:2:Fyes--0-28---
SDEG203122:0:Tyes-6321054
SDEN318161:0:Tyes1603461512
SDYS300267:1:Tyes07432165
SELO269084:0:Tyes637-0--525--
SENT209261:0:Tno07432165
SENT220341:0:Tno07432165
SENT295319:0:Tno08543176
SENT321314:2:Tno07432165
SENT454169:2:Tno07432165
SEPI176279:1:Tyes-0568914
SEPI176280:0:Tno-06791014
SERY405948:0:Tyes-13940---
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