CANDIDATE ID: 217

CANDIDATE ID: 217

NUMBER OF GENES: 8
AVERAGE SCORE:    9.9940736e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    7.5000012e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG11583 (gcl) (b0507)
   Products of gene:
     - GLYOCARBOLIG-MONOMER (Gcl)
     - GLYOCARBOLIG-CPLX (glyoxylate carboligase)
       Reactions:
        2 glyoxylate + H+  ->  CO2 + tartronate semialdehyde
         In pathways
         GLYCOL-GLYOXDEG-PWY (superpathway of glycol metabolism and degradation)
         GLYCOLATEMET-PWY (glycolate and glyoxylate degradation I)

- EG11577 (leuB) (b0073)
   Products of gene:
     - 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
     - 3-ISOPROPYLMALDEHYDROG-CPLX (3-isopropylmalate dehydrogenase)
       Reactions:
        (2R,3S)-3-isopropylmalate + NAD+  =  (2S)-2-isopropyl-3-oxosuccinate + NADH + H+
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)

- EG11226 (leuA) (b0074)
   Products of gene:
     - 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
       Reactions:
        2-oxoisovalerate + acetyl-CoA + H2O  ->  (2S)-2-isopropylmalate + coenzyme A + H+
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         LEUSYN-PWY (leucine biosynthesis)

- EG10502 (ilvN) (b3670)
   Products of gene:
     - SMALLILVN-MONOMER (IlvN)
     - ACETOLACTSYNI-CPLX (acetohydroxybutanoate synthase / acetolactate synthase)
       Reactions:
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)

- EG10500 (ilvI) (b0077)
   Products of gene:
     - ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
     - ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase)
       Reactions:
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)

- EG10499 (ilvH) (brnP)
   Products of gene:
     - ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
     - ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase)
       Reactions:
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)

- EG10496 (ilvD) (b3771)
   Products of gene:
     - DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
     - DIHYDROXYACIDDEHYDRAT-CPLX (dihydroxy acid dehydratase)
       Reactions:
        2,3-dihydroxy-isovalerate  ->  2-oxoisovalerate + H2O
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         VALSYN-PWY (valine biosynthesis)
        2,3-dihydroxy-3-methylvalerate  ->  2-keto-3-methyl-valerate + H2O
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)

- EG10494 (ilvB) (b3671)
   Products of gene:
     - LARGEILVB-MONOMER (IlvB)
     - ACETOLACTSYNI-CPLX (acetohydroxybutanoate synthase / acetolactate synthase)
       Reactions:
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)



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ORGANISMS CONTAINING AT LEAST 7 GENES FROM THE GROUP:

Total number of orgs: 244
Effective number of orgs (counting one per cluster within 468 clusters): 190

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317588
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329538
YPES386656 ncbi Yersinia pestis Pestoides F8
YPES377628 ncbi Yersinia pestis Nepal5168
YPES360102 ncbi Yersinia pestis Antiqua8
YPES349746 ncbi Yersinia pestis Angola8
YPES214092 ncbi Yersinia pestis CO928
YPES187410 ncbi Yersinia pestis KIM 108
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80818
XAUT78245 ncbi Xanthobacter autotrophicus Py27
WSUC273121 ncbi Wolinella succinogenes DSM 17408
VVUL216895 ncbi Vibrio vulnificus CMCP68
VVUL196600 ncbi Vibrio vulnificus YJ0168
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106338
VFIS312309 ncbi Vibrio fischeri ES1148
VCHO345073 ncbi Vibrio cholerae O3958
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169618
UMET351160 ncbi uncultured methanogenic archaeon RC-I7
TTHE300852 ncbi Thermus thermophilus HB87
TTHE262724 ncbi Thermus thermophilus HB277
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB47
TSP28240 Thermotoga sp.7
TSP1755 Thermoanaerobacter sp.8
TROS309801 ncbi Thermomicrobium roseum DSM 51597
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332237
TPET390874 ncbi Thermotoga petrophila RKU-17
TMAR243274 ncbi Thermotoga maritima MSB87
TERY203124 ncbi Trichodesmium erythraeum IMS1018
TELO197221 ncbi Thermosynechococcus elongatus BP-18
TCRU317025 ncbi Thiomicrospira crunogena XCL-28
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen8
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT28
STHE292459 ncbi Symbiobacterium thermophilum IAM 148638
SSP94122 ncbi Shewanella sp. ANA-38
SSP84588 ncbi Synechococcus sp. WH 81027
SSP64471 ncbi Synechococcus sp. CC93118
SSP387093 ncbi Sulfurovum sp. NBC37-18
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)8
SSP321327 ncbi Synechococcus sp. JA-3-3Ab8
SSP1148 ncbi Synechocystis sp. PCC 68038
SSP1131 Synechococcus sp. CC96057
SSON300269 ncbi Shigella sonnei Ss0468
SSED425104 ncbi Shewanella sediminis HAW-EB38
SPRO399741 ncbi Serratia proteamaculans 5688
SPEA398579 ncbi Shewanella pealeana ATCC 7003458
SONE211586 ncbi Shewanella oneidensis MR-18
SLOI323850 ncbi Shewanella loihica PV-48
SHIGELLA ncbi Shigella flexneri 2a str. 2457T8
SHAL458817 ncbi Shewanella halifaxensis HAW-EB48
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB8
SFLE373384 ncbi Shigella flexneri 5 str. 84018
SFLE198214 ncbi Shigella flexneri 2a str. 3018
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4768
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B678
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91508
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT188
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty28
SELO269084 ncbi Synechococcus elongatus PCC 63018
SDYS300267 ncbi Shigella dysenteriae Sd1978
SDEN318161 ncbi Shewanella denitrificans OS2177
SDEG203122 ncbi Saccharophagus degradans 2-407
SBOY300268 ncbi Shigella boydii Sb2278
SBAL402882 ncbi Shewanella baltica OS1858
SBAL399599 ncbi Shewanella baltica OS1958
SACI56780 ncbi Syntrophus aciditrophicus SB7
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170297
RPAL316058 ncbi Rhodopseudomonas palustris HaA27
RPAL316057 ncbi Rhodopseudomonas palustris BisB57
RPAL316056 ncbi Rhodopseudomonas palustris BisB187
RPAL316055 ncbi Rhodopseudomonas palustris BisA537
RPAL258594 ncbi Rhodopseudomonas palustris CGA0097
RMET266264 ncbi Ralstonia metallidurans CH347
REUT381666 ncbi Ralstonia eutropha H167
REUT264198 ncbi Ralstonia eutropha JMP1347
PTHE370438 ncbi Pelotomaculum thermopropionicum SI8
PSTU379731 ncbi Pseudomonas stutzeri A15017
PSP296591 ncbi Polaromonas sp. JS6667
PPUT351746 ncbi Pseudomonas putida F17
PPRO298386 ncbi Photobacterium profundum SS98
PMUL272843 ncbi Pasteurella multocida multocida Pm708
PMOB403833 ncbi Petrotoga mobilis SJ958
PMEN399739 ncbi Pseudomonas mendocina ymp8
PMAR93060 ncbi Prochlorococcus marinus MIT 92157
PMAR74547 ncbi Prochlorococcus marinus MIT 93137
PMAR74546 ncbi Prochlorococcus marinus MIT 93127
PMAR59920 ncbi Prochlorococcus marinus NATL2A8
PMAR167555 ncbi Prochlorococcus marinus NATL1A8
PMAR167546 ncbi Prochlorococcus marinus MIT 93017
PMAR167542 ncbi Prochlorococcus marinus MIT 95157
PMAR167540 Prochlorococcus marinus pastoris MED4ax7
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13758
PMAR146891 ncbi Prochlorococcus marinus AS96017
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO18
PING357804 ncbi Psychromonas ingrahamii 378
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1257
PFLU220664 ncbi Pseudomonas fluorescens Pf-57
PFLU205922 ncbi Pseudomonas fluorescens Pf0-17
PENT384676 ncbi Pseudomonas entomophila L487
PCRY335284 ncbi Psychrobacter cryohalolentis K57
PCAR338963 ncbi Pelobacter carbinolicus DSM 23808
PATL342610 ncbi Pseudoalteromonas atlantica T6c7
PARC259536 ncbi Psychrobacter arcticus 273-47
PAER208964 ncbi Pseudomonas aeruginosa PAO17
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA147
OIHE221109 ncbi Oceanobacillus iheyensis HTE8318
OCAR504832 ncbi Oligotropha carboxidovorans OM57
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2557
NSP387092 ncbi Nitratiruptor sp. SB155-28
NSP103690 ncbi Nostoc sp. PCC 71208
NOCE323261 ncbi Nitrosococcus oceani ATCC 197077
NHAM323097 ncbi Nitrobacter hamburgensis X147
NEUT335283 ncbi Nitrosomonas eutropha C917
NEUR228410 ncbi Nitrosomonas europaea ATCC 197187
MTHE349307 ncbi Methanosaeta thermophila PT7
MTHE264732 ncbi Moorella thermoacetica ATCC 390738
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H7
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E8
MMAZ192952 ncbi Methanosarcina mazei Go17
MMAR444158 ncbi Methanococcus maripaludis C67
MMAR402880 ncbi Methanococcus maripaludis C57
MMAR368407 ncbi Methanoculleus marisnigri JR17
MMAR267377 ncbi Methanococcus maripaludis S27
MMAG342108 ncbi Magnetospirillum magneticum AMB-17
MLAB410358 ncbi Methanocorpusculum labreanum Z7
MKAN190192 ncbi Methanopyrus kandleri AV197
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26617
MHUN323259 ncbi Methanospirillum hungatei JF-17
MCAP243233 ncbi Methylococcus capsulatus Bath8
MBUR259564 ncbi Methanococcoides burtonii DSM 62427
MBAR269797 ncbi Methanosarcina barkeri Fusaro7
MAQU351348 ncbi Marinobacter aquaeolei VT88
MAER449447 ncbi Microcystis aeruginosa NIES-8438
MAEO419665 ncbi Methanococcus aeolicus Nankai-37
MACE188937 ncbi Methanosarcina acetivorans C2A7
LSPH444177 ncbi Lysinibacillus sphaericus C3-417
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1307
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566017
LCHO395495 ncbi Leptothrix cholodnii SP-67
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785788
HMOD498761 ncbi Heliobacterium modesticaldum Ice18
HINF71421 ncbi Haemophilus influenzae Rd KW207
HINF374930 ncbi Haemophilus influenzae PittEE7
HINF281310 ncbi Haemophilus influenzae 86-028NP7
HCHE349521 ncbi Hahella chejuensis KCTC 23968
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237798
HARS204773 ncbi Herminiimonas arsenicoxydans7
GVIO251221 ncbi Gloeobacter violaceus PCC 74217
GURA351605 ncbi Geobacter uraniireducens Rf48
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-28
GSUL243231 ncbi Geobacter sulfurreducens PCA8
GMET269799 ncbi Geobacter metallireducens GS-158
GKAU235909 ncbi Geobacillus kaustophilus HTA4268
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S857
ESP42895 Enterobacter sp.8
EFER585054 ncbi Escherichia fergusonii ATCC 354698
ECOO157 ncbi Escherichia coli O157:H7 EDL9338
ECOL83334 Escherichia coli O157:H78
ECOL585397 ncbi Escherichia coli ED1a8
ECOL585057 ncbi Escherichia coli IAI398
ECOL585056 ncbi Escherichia coli UMN0268
ECOL585055 ncbi Escherichia coli 559898
ECOL585035 ncbi Escherichia coli S888
ECOL585034 ncbi Escherichia coli IAI18
ECOL481805 ncbi Escherichia coli ATCC 87398
ECOL469008 ncbi Escherichia coli BL21(DE3)8
ECOL439855 ncbi Escherichia coli SMS-3-58
ECOL413997 ncbi Escherichia coli B str. REL6068
ECOL409438 ncbi Escherichia coli SE118
ECOL405955 ncbi Escherichia coli APEC O18
ECOL364106 ncbi Escherichia coli UTI898
ECOL362663 ncbi Escherichia coli 5368
ECOL331111 ncbi Escherichia coli E24377A8
ECOL316407 ncbi Escherichia coli K-12 substr. W31108
ECOL199310 ncbi Escherichia coli CFT0738
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10438
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough8
DSP255470 ncbi Dehalococcoides sp. CBDB17
DSP216389 ncbi Dehalococcoides sp. BAV17
DRED349161 ncbi Desulfotomaculum reducens MI-18
DPSY177439 ncbi Desulfotalea psychrophila LSv547
DOLE96561 ncbi Desulfococcus oleovorans Hxd37
DHAF138119 ncbi Desulfitobacterium hafniense Y517
DETH243164 ncbi Dehalococcoides ethenogenes 1958
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G208
DARO159087 ncbi Dechloromonas aromatica RCB8
CSP501479 Citreicella sp. SE457
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)7
CPSY167879 ncbi Colwellia psychrerythraea 34H7
CPHY357809 ncbi Clostridium phytofermentans ISDg7
CMET456442 ncbi Candidatus Methanoregula boonei 6A87
CKLU431943 ncbi Clostridium kluyveri DSM 5557
CJEJ407148 ncbi Campylobacter jejuni jejuni 811167
CJEJ360109 ncbi Campylobacter jejuni doylei 269.977
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1767
CJEJ195099 ncbi Campylobacter jejuni RM12217
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111687
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29018
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3817
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C8
CCUR360105 ncbi Campylobacter curvus 525.927
CAULO ncbi Caulobacter crescentus CB157
BWEI315730 ncbi Bacillus weihenstephanensis KBAB48
BVIE269482 ncbi Burkholderia vietnamiensis G47
BTHU412694 ncbi Bacillus thuringiensis Al Hakam8
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-278
BSUB ncbi Bacillus subtilis subtilis 1688
BSP376 Bradyrhizobium sp.7
BSP36773 Burkholderia sp.7
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)7
BPUM315750 ncbi Bacillus pumilus SAFR-0328
BLIC279010 ncbi Bacillus licheniformis ATCC 145808
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1107
BCLA66692 ncbi Bacillus clausii KSM-K167
BCER572264 ncbi Bacillus cereus 03BB1028
BCER405917 Bacillus cereus W8
BCER315749 ncbi Bacillus cytotoxicus NVH 391-988
BCER288681 ncbi Bacillus cereus E33L8
BCER226900 ncbi Bacillus cereus ATCC 145798
BCEN331272 ncbi Burkholderia cenocepacia HI24247
BCEN331271 ncbi Burkholderia cenocepacia AU 10547
BANT592021 ncbi Bacillus anthracis A02488
BANT568206 ncbi Bacillus anthracis CDC 6848
BANT261594 ncbi Bacillus anthracis Ames Ancestor8
BANT260799 ncbi Bacillus anthracis Sterne8
BAMY326423 ncbi Bacillus amyloliquefaciens FZB428
BAMB398577 ncbi Burkholderia ambifaria MC40-67
BAMB339670 ncbi Burkholderia ambifaria AMMD7
AVAR240292 ncbi Anabaena variabilis ATCC 294138
ASP76114 ncbi Aromatoleum aromaticum EbN17
ASP62928 ncbi Azoarcus sp. BH727
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4498
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL038
APLE416269 ncbi Actinobacillus pleuropneumoniae L207
AMET293826 ncbi Alkaliphilus metalliredigens QYMF7
AMAR329726 ncbi Acaryochloris marina MBIC110177
AHYD196024 Aeromonas hydrophila dhakensis8
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43048
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232707
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C8
ACRY349163 ncbi Acidiphilium cryptum JF-57
ACAU438753 ncbi Azorhizobium caulinodans ORS 5717
ABUT367737 ncbi Arcobacter butzleri RM40187
ABOR393595 ncbi Alcanivorax borkumensis SK27
AAEO224324 ncbi Aquifex aeolicus VF57


Names of the homologs of the genes in the group in each of these orgs
  EG11583   EG11577   EG11226   EG10502   EG10500   EG10499   EG10496   EG10494   
YPSE349747 YPSIP31758_3401YPSIP31758_3406YPSIP31758_3405YPSIP31758_1838YPSIP31758_3401YPSIP31758_3400YPSIP31758_0157YPSIP31758_1839
YPSE273123 YPTB0675YPTB0671YPTB0672YPTB2217YPTB0675YPTB0676YPTB0137YPTB2216
YPES386656 YPDSF_3102YPDSF_3107YPDSF_3106YPDSF_0848YPDSF_3102YPDSF_3101YPDSF_3510YPDSF_0849
YPES377628 YPN_0407YPN_0402YPN_0403YPN_1756YPN_0407YPN_0408YPN_0069YPN_1755
YPES360102 YPA_3560YPA_3565YPA_3564YPA_1643YPA_3560YPA_3559YPA_0124YPA_1642
YPES349746 YPANGOLA_A2932YPANGOLA_A2937YPANGOLA_A2936YPANGOLA_A2288YPANGOLA_A2932YPANGOLA_A2931YPANGOLA_A0485YPANGOLA_A0482
YPES214092 YPO0539YPO0532YPO0533YPO2294YPO0539YPO0540YPO3897YPO2293
YPES187410 Y3640Y3646Y3645Y2127Y3640Y3639Y0338Y2126
YENT393305 YE0658YE0653YE0654YE2061YE0658YE0659YE0151YE2060
XAUT78245 XAUT_2367XAUT_2589XAUT_1329XAUT_1488XAUT_1489XAUT_0070XAUT_1488
WSUC273121 WS0103WS1813WS0624WS0102WS0103WS0102WS0130WS0103
VVUL216895 VV1_0648VV1_0655VV1_0654VV1_0647VV1_0648VV1_0647VV1_1029VV1_1032
VVUL196600 VV0495VV0486VV0487VV0496VV0495VV0496VV3243VV3240
VPAR223926 VP0352VP0344VP0346VP0353VP0352VP0353VP3061VP3058
VFIS312309 VF2263VF0294VF0295VF2262VF2263VF2262VF2559VF2556
VCHO345073 VC0395_A2059VC0395_A2066VC0395_A2065VC0395_A2058VC0395_A2059VC0395_A2058VC0395_A2491VC0395_A2488
VCHO VC2483VC2491VC2490VC2482VC2483VC2482VC0028VC0031
UMET351160 LRC534RCIX673LRC533LRC534LRC533RCIX1841LRC534
TTHE300852 TTHA1213TTHA1230TTHA1210TTHA1212TTHA1213TTHA1212TTHA1213
TTHE262724 TT_C0852TT_C0867TT_C0849TT_C0851TT_C0852TT_C0851TT_C0852
TTEN273068 TTE0021TTE0019TTE0016TTE0014TTE0014TTE0020TTE0021
TSP28240 TRQ2_0389TRQ2_0381TRQ2_0384TRQ2_0388TRQ2_0389TRQ2_0388TRQ2_0386
TSP1755 TETH514_0019TETH514_0017TETH514_0014TETH514_0012TETH514_0019TETH514_0012TETH514_0018TETH514_0019
TROS309801 TRD_0627TRD_1693TRD_1690TRD_0626TRD_0627TRD_0626TRD_0627
TPSE340099 TETH39_0020TETH39_0018TETH39_0015TETH39_0013TETH39_0013TETH39_0019TETH39_0020
TPET390874 TPET_0372TPET_0364TPET_0367TPET_0371TPET_0372TPET_0371TPET_0369
TMAR243274 TM_0548TM_0556TM_0553TM_0549TM_0548TM_0549TM_0551
TERY203124 TERY_2843TERY_4403TERY_2253TERY_1850TERY_2843TERY_1850TERY_0019TERY_2843
TELO197221 TLR1296TLR1600TLL1397TLL0880TLR1296TLL0880TLL1057TLR1296
TCRU317025 TCR_0634TCR_0797TCR_0611TCR_0635TCR_0634TCR_0635TCR_0599TCR_0634
SWOL335541 SWOL_2146SWOL_2140SWOL_2143SWOL_2145SWOL_2146SWOL_2145SWOL_2147SWOL_2146
STYP99287 STM0517STM0112STM0113STM3795STM0116STM0117STM3904STM3901
STHE292459 STH2684STH3035STH2687STH2689STH2684STH2689STH2685STH2684
SSP94122 SHEWANA3_2269SHEWANA3_3760SHEWANA3_3761SHEWANA3_2270SHEWANA3_2269SHEWANA3_2270SHEWANA3_0358SHEWANA3_0356
SSP84588 SYNW0784OR1664SYNW0730OR1620SYNW0680OR1970SYNW1746OR2980SYNW0680OR1970SYNW1123OR3467SYNW1746OR2980
SSP64471 GSYN2129GSYN1830GSYN1052GSYN0962GSYN2129GSYN0962GSYN1809GSYN2129
SSP387093 SUN_1823SUN_1705SUN_1956SUN_1822SUN_1823SUN_1822SUN_2427SUN_1823
SSP321332 CYB_0648CYB_1631CYB_1442CYB_0971CYB_0648CYB_0971CYB_1987CYB_0648
SSP321327 CYA_2073CYA_1798CYA_2223CYA_2130CYA_2073CYA_2130CYA_1697CYA_2073
SSP1148 SLR2088SLR1517SLR0186SLL0065SLR2088SLL0065SLR0452SLR2088
SSP1131 SYNCC9605_0717SYNCC9605_1865SYNCC9605_1939SYNCC9605_1989SYNCC9605_1989SYNCC9605_1260SYNCC9605_0717
SSON300269 SSO_0084SSO_0080SSO_0081SSO_3624SSO_0084SSO_0085SSO_3942SSO_3939
SSED425104 SSED_2666SSED_0394SSED_0393SSED_2667SSED_2666SSED_2667SSED_4162SSED_4165
SPRO399741 SPRO_0748SPRO_0744SPRO_0745SPRO_0733SPRO_0748SPRO_0749SPRO_4757SPRO_0734
SPEA398579 SPEA_1911SPEA_3827SPEA_3828SPEA_1910SPEA_1911SPEA_1910SPEA_0348SPEA_0345
SONE211586 SO_2279SO_4235SO_4236SO_2278SO_2279SO_2278SO_4345SO_4347
SLOI323850 SHEW_1776SHEW_3471SHEW_3472SHEW_1775SHEW_1776SHEW_1775SHEW_0292SHEW_0289
SHIGELLA GCLLEUBLEUAILVNILVIILVHILVDILVB
SHAL458817 SHAL_2387SHAL_0439SHAL_0438SHAL_2388SHAL_2387SHAL_2388SHAL_3941SHAL_3944
SFUM335543 SFUM_3024SFUM_3031SFUM_0306SFUM_3022SFUM_3024SFUM_3025SFUM_0356SFUM_3023
SFLE373384 SFV_0474SFV_0065SFV_0066SFV_3839SFV_0068SFV_0069SFV_3731SFV_3838
SFLE198214 AAN42100.1AAN41733.1AAN41734.1AAN45231.1AAN41737.1AAN41738.1AAN45283.1AAN45280.1
SENT454169 SEHA_C0625SEHA_C0123SEHA_C0124SEHA_C4126SEHA_C0127SEHA_C0128SEHA_C4235SEHA_C4232
SENT321314 SCH_0113SCH_0108SCH_0109SCH_3715SCH_0113SCH_0114SCH_3809SCH_3716
SENT295319 SPA2205SPA0114SPA0115SPA3645SPA0118SPA0119SPA3743SPA3740
SENT220341 STY0565STY0131STY0132STY3987STY0135STY0136STY3653STY3986
SENT209261 T2343T0116T0117T3723T0120T0121T3394T3722
SELO269084 SYC1366_CSYC2490_CSYC0145_DSYC1672_CSYC1366_CSYC1672_CSYC0898_CSYC1366_C
SDYS300267 SDY_0395SDY_0100SDY_0101SDY_4154SDY_0107SDY_0108SDY_3977SDY_4155
SDEN318161 SDEN_0335SDEN_0334SDEN_2123SDEN_2122SDEN_2123SDEN_3412SDEN_3414
SDEG203122 SDE_2544SDE_2084SDE_2523SDE_2543SDE_2544SDE_2543SDE_0358
SBOY300268 SBO_0411SBO_0060SBO_0061SBO_3699SBO_0065SBO_0066SBO_3782SBO_3779
SBAL402882 SHEW185_2374SHEW185_0386SHEW185_0385SHEW185_2375SHEW185_2374SHEW185_2375SHEW185_4007SHEW185_4009
SBAL399599 SBAL195_2490SBAL195_0398SBAL195_0397SBAL195_2491SBAL195_2490SBAL195_2491SBAL195_4126SBAL195_4128
SACI56780 SYN_01711SYN_00088SYN_00090SYN_01712SYN_01711SYN_01708SYN_01711
RSPH349101 RSPH17029_1294RSPH17029_2518RSPH17029_1005RSPH17029_1294RSPH17029_1293RSPH17029_3801RSPH17029_1294
RPAL316058 RPB_3345RPB_0335RPB_3330RPB_3345RPB_3344RPB_4066RPB_3345
RPAL316057 RPD_2098RPD_0490RPD_2112RPD_2098RPD_2100RPD_3804RPD_2098
RPAL316056 RPC_3255RPC_0240RPC_3235RPC_3255RPC_3253RPC_4321RPC_3255
RPAL316055 RPE_2187RPE_0480RPE_2209RPE_2187RPE_2189RPE_4363RPE_2187
RPAL258594 RPA2031RPA0227RPA2046RPA2031RPA2032RPA1463RPA2031
RMET266264 RMET_3448RMET_2472RMET_0918RMET_0912RMET_0911RMET_0912RMET_4585
REUT381666 H16_A3598H16_A2619H16_A1041H16_A1036H16_A1035H16_A1036H16_B0280
REUT264198 REUT_A3291REUT_A2311REUT_A0953REUT_A0948REUT_A0947REUT_A0948REUT_A2432
PTHE370438 PTH_0530PTH_0534PTH_0531PTH_0736PTH_0527PTH_0528PTH_0526PTH_0527
PSTU379731 PST_3114PST_1774PST_3240PST_3257PST_3258PST_3257PST_4012
PSP296591 BPRO_4561BPRO_3610BPRO_2322BPRO_2318BPRO_2317BPRO_2318BPRO_2052
PPUT351746 PPUT_1572PPUT_3771PPUT_4543PPUT_4544PPUT_4543PPUT_5002PPUT_4544
PPRO298386 PBPRA2275PBPRA0418PBPRA0419PBPRA0426PBPRA0425PBPRA0426PBPRA3595PBPRA3593
PMUL272843 PM0870PM1961PM1962PM0869PM0870PM0869PM1625PM1628
PMOB403833 PMOB_1592PMOB_1586PMOB_1589PMOB_1591PMOB_1592PMOB_1591PMOB_1593PMOB_1592
PMEN399739 PMEN_2769PMEN_2721PMEN_0989PMEN_1007PMEN_1006PMEN_1007PMEN_4205PMEN_1006
PMAR93060 P9215_08811P9215_12011P9215_13601P9215_06071P9215_13601P9215_08681P9215_06071
PMAR74547 PMT1239PMT0531PMT1121PMT1176PMT1239PMT1176PMT1239
PMAR74546 PMT9312_0794PMT9312_1077PMT9312_1253PMT9312_0526PMT9312_1253PMT9312_0782PMT9312_0526
PMAR59920 PMN2A_1858PMN2A_0194PMN2A_0686PMN2A_0764PMN2A_1858PMN2A_0764PMN2A_0180PMN2A_1858
PMAR167555 NATL1_05831NATL1_08261NATL1_15201NATL1_16041NATL1_05831NATL1_16041NATL1_08121NATL1_05831
PMAR167546 P9301ORF_0863P9301ORF_1193P9301ORF_1367P9301ORF_0565P9301ORF_1367P9301ORF_0850P9301ORF_0565
PMAR167542 P9515ORF_0836P9515ORF_1208P9515ORF_1381P9515ORF_0626P9515ORF_1381P9515ORF_0850P9515ORF_0626
PMAR167540 PMM0786PMM1066PMM1154PMM0526PMM1154PMM0774PMM0526
PMAR167539 PRO_0526PRO_0862PRO_1134PRO_1251PRO_0526PRO_1251PRO_0847PRO_0526
PMAR146891 A9601_08501A9601_11711A9601_13311A9601_05821A9601_13311A9601_08361A9601_05821
PLUM243265 PLU3666PLU3674PLU3673PLU3665PLU3666PLU3665PLU4682PLU4685
PING357804 PING_3430PING_2229PING_0216PING_3431PING_3430PING_3431PING_0346PING_0348
PHAL326442 PSHAA2893PSHAA2894PSHAB0463PSHAB0464PSHAB0463PSHAA2769PSHAA2771
PFLU220664 PFL_1701PFL_2066PFL_5254PFL_5255PFL_5254PFL_5877PFL_5255
PFLU205922 PFL_1598PFL_1892PFL_4787PFL_4788PFL_4787PFL_5358PFL_4788
PENT384676 PSEEN1672PSEEN1652PSEEN4710PSEEN4711PSEEN4710PSEEN0282PSEEN4711
PCRY335284 PCRYO_0522PCRYO_1571PCRYO_0523PCRYO_0522PCRYO_0523PCRYO_1074PCRYO_0522
PCAR338963 PCAR_1910PCAR_1904PCAR_1907PCAR_1909PCAR_1910PCAR_1909PCAR_1911PCAR_1910
PATL342610 PATL_0624PATL_3269PATL_3268PATL_0625PATL_0624PATL_0625PATL_4250
PARC259536 PSYC_0527PSYC_1410PSYC_0528PSYC_0527PSYC_0528PSYC_1304PSYC_0527
PAER208964 PA1502PA3118PA4695PA4696PA4695PA0353PA4696
PAER208963 PA14_45000PA14_23790PA14_62150PA14_62160PA14_62150PA14_04630PA14_62160
OIHE221109 OB2623OB2619OB2620OB2622OB2623OB2622OB2624OB2623
OCAR504832 OCAR_6562OCAR_4283OCAR_5296OCAR_5290OCAR_5291OCAR_4462OCAR_5290
NWIN323098 NWI_2343NWI_2795NWI_2338NWI_2343NWI_2342NWI_0213NWI_2343
NSP387092 NIS_0810NIS_0727NIS_1407NIS_0811NIS_0810NIS_0811NIS_0126NIS_0810
NSP103690 ALL4613ALR1313ALR4840ALR4627ALL4613ALR4627ALR2771ALL4613
NOCE323261 NOC_2520NOC_1014NOC_2516NOC_2519NOC_2520NOC_2519NOC_2001
NHAM323097 NHAM_2722NHAM_3595NHAM_2715NHAM_2722NHAM_2721NHAM_0169NHAM_2722
NEUT335283 NEUT_1262NEUT_1147NEUT_1244NEUT_1261NEUT_1262NEUT_1261NEUT_2238
NEUR228410 NE1325NE0688NE1320NE1324NE1325NE1324NE0104
MTHE349307 MTHE_0110MTHE_1298MTHE_0111MTHE_0110MTHE_0111MTHE_0673MTHE_0110
MTHE264732 MOTH_2258MOTH_2252MOTH_2255MOTH_2257MOTH_2258MOTH_2257MOTH_2259MOTH_2258
MTHE187420 MTH1444MTH184MTH1481MTH1443MTH1444MTH1443MTH1444
MSUC221988 MS1319MS0598MS0599MS1318MS1319MS1318MS2219MS2223
MMAZ192952 MM0670MM1284MM0669MM0670MM0669MM0259MM0670
MMAR444158 MMARC6_0239MMARC6_1596MMARC6_0238MMARC6_0239MMARC6_0238MMARC6_0633MMARC6_0239
MMAR402880 MMARC5_0954MMARC5_0531MMARC5_0953MMARC5_0954MMARC5_0953MMARC5_1356MMARC5_0954
MMAR368407 MEMAR_1070MEMAR_1069MEMAR_1071MEMAR_1070MEMAR_1071MEMAR_0985MEMAR_1070
MMAR267377 MMP0650MMP1063MMP0651MMP0650MMP0651MMP0318MMP0650
MMAG342108 AMB3507AMB4069AMB3512AMB3507AMB3508AMB2536AMB3507
MLAB410358 MLAB_0605MLAB_0603MLAB_0606MLAB_0605MLAB_0606MLAB_0613MLAB_0605
MKAN190192 MK0531MK0391MK0545MK0531MK0545MK1197MK0531
MJAN243232 MJ_0277MJ_1195MJ_0161MJ_0277MJ_0161MJ_1276MJ_0277
MHUN323259 MHUN_1242MHUN_1243MHUN_1241MHUN_1242MHUN_1241MHUN_0139MHUN_1242
MCAP243233 MCA_2270MCA_2063MCA_2275MCA_2271MCA_2270MCA_2271MCA_2082MCA_2270
MBUR259564 MBUR_0710MBUR_0711MBUR_0709MBUR_0710MBUR_0709MBUR_2246MBUR_0710
MBAR269797 MBAR_A0218MBAR_A0942MBAR_A0219MBAR_A0218MBAR_A0219MBAR_A2069MBAR_A0218
MAQU351348 MAQU_0882MAQU_1563MAQU_2477MAQU_0883MAQU_0882MAQU_0883MAQU_2423MAQU_2114
MAER449447 MAE_50700MAE_00210MAE_54460MAE_48120MAE_50700MAE_48120MAE_28670MAE_50700
MAEO419665 MAEO_0682MAEO_0849MAEO_0683MAEO_0682MAEO_0683MAEO_0680MAEO_0682
MACE188937 MA3792MA4615MA3791MA3792MA3791MA1802MA3792
LSPH444177 BSPH_3389BSPH_3385BSPH_3386BSPH_3389BSPH_3388BSPH_3390BSPH_3389
LINT267671 LIC_11768LIC_11726LIC_11410LIC_11409LIC_11410LIC_11101LIC_12764
LINT189518 LA2152LA2202LA2569LA2570LA2569LA2958LA2570
LCHO395495 LCHO_1135LCHO_1677LCHO_2888LCHO_2892LCHO_2893LCHO_2892LCHO_2893
KPNE272620 GKPORF_B4361GKPORF_B4358GKPORF_B4359GKPORF_B3430GKPORF_B4361GKPORF_B4362GKPORF_B3614GKPORF_B3431
HMOD498761 HM1_1979HM1_1518HM1_1515HM1_1980HM1_1979HM1_1512HM1_1511HM1_1514
HINF71421 HI_1585HI_0987HI_0986HI_1584HI_1585HI_1584HI_0738
HINF374930 CGSHIEE_05525CGSHIEE_07030CGSHIEE_07035CGSHIEE_05520CGSHIEE_05525CGSHIEE_05520CGSHIEE_08425
HINF281310 NTHI1468NTHI1161NTHI1160NTHI1469NTHI1468NTHI1469NTHI0895
HCHE349521 HCH_05916HCH_02430HCH_05908HCH_05915HCH_05916HCH_05915HCH_05854HCH_06858
HAUR316274 HAUR_4449HAUR_4439HAUR_4446HAUR_4448HAUR_4449HAUR_4448HAUR_4450HAUR_4449
HARS204773 HEAR0332HEAR1217HEAR1242HEAR1238HEAR1237HEAR1238HEAR0734
GVIO251221 GLR3279GLL3551GLL2290GLL1136GLR3279GLL1136GLR3279
GURA351605 GURA_3720GURA_1045GURA_3715GURA_3719GURA_3720GURA_3719GURA_3721GURA_3720
GTHE420246 GTNG_2590GTNG_2586GTNG_2587GTNG_2589GTNG_2590GTNG_2589GTNG_1931GTNG_2590
GSUL243231 GSU_1911GSU_2879GSU_1906GSU_1910GSU_1911GSU_1910GSU_1912GSU_1911
GMET269799 GMET_1260GMET_0602GMET_1265GMET_1261GMET_1260GMET_1261GMET_1259GMET_1260
GKAU235909 GK2661GK2657GK2658GK2660GK2661GK2660GK2046GK2661
FSUC59374 FSU3213FSU2908FSU3283FSU3284FSU3283FSU0787FSU3284
ESP42895 ENT638_0624ENT638_0621ENT638_0622ENT638_0026ENT638_0624ENT638_0625ENT638_4012ENT638_0025
EFER585054 EFER_0099EFER_0095EFER_0096EFER_3967EFER_0099EFER_0100EFER_3731EFER_3968
ECOO157 GCLLEUBLEUAILVNILVIILVHILVDILVG
ECOL83334 ECS0568ECS0077ECS0078ECS4611ECS0081ECS0082ECS4705ECS4702
ECOL585397 ECED1_0528ECED1_0073ECED1_0074ECED1_4366ECED1_0079ECED1_0080ECED1_4457ECED1_4454
ECOL585057 ECIAI39_0081ECIAI39_0078ECIAI39_0079ECIAI39_4272ECIAI39_0081ECIAI39_0082ECIAI39_3015ECIAI39_4273
ECOL585056 ECUMN_0548ECUMN_0075ECUMN_0076ECUMN_4201ECUMN_0078ECUMN_0079ECUMN_4297ECUMN_4294
ECOL585055 EC55989_0522EC55989_0071EC55989_0072EC55989_4138EC55989_0074EC55989_0075EC55989_4243EC55989_4240
ECOL585035 ECS88_0506ECS88_0078ECS88_0079ECS88_4095ECS88_0081ECS88_0082ECS88_4194ECS88_4191
ECOL585034 ECIAI1_0510ECIAI1_0074ECIAI1_0075ECIAI1_3846ECIAI1_0077ECIAI1_0078ECIAI1_3958ECIAI1_3955
ECOL481805 ECOLC_3115ECOLC_3584ECOLC_3583ECOLC_0029ECOLC_3580ECOLC_3579ECOLC_4231ECOLC_4234
ECOL469008 ECBD_3150ECBD_3543ECBD_3542ECBD_0033ECBD_3539ECBD_3538ECBD_4268ECBD_0032
ECOL439855 ECSMS35_0550ECSMS35_0078ECSMS35_0079ECSMS35_4037ECSMS35_0083ECSMS35_0084ECSMS35_4137ECSMS35_4134
ECOL413997 ECB_00457ECB_00075ECB_00076ECB_03554ECB_00079ECB_00080ECB_03649ECB_03555
ECOL409438 ECSE_0533ECSE_0073ECSE_0074ECSE_3954ECSE_0079ECSE_0080ECSE_4054ECSE_4051
ECOL405955 APECO1_1507APECO1_1910APECO1_1909APECO1_2782APECO1_1907APECO1_1906APECO1_2700APECO1_2703
ECOL364106 UTI89_C5032UTI89_C0080UTI89_C0081UTI89_C4226UTI89_C0085UTI89_C0086UTI89_C4327UTI89_C4324
ECOL362663 ECP_0568ECP_0075ECP_0076ECP_3877ECP_0079ECP_0080ECP_3964ECP_3962
ECOL331111 ECE24377A_0544ECE24377A_0076ECE24377A_0077ECE24377A_4179ECE24377A_0079ECE24377A_0080ECE24377A_4282ECE24377A_4180
ECOL316407 ECK0500:JW0495:B0507ECK0075:JW5807:B0073ECK0076:JW0073:B0074ECK3661:JW3645:B3670ECK0079:JW0076:B0077ECK0080:JW0077:B0078ECK3763:JW5605:B3771ECK3662:JW3646:B3671
ECOL199310 C0622C0090C0091C4595C0095C0096C4693C4690
ECAR218491 ECA3829ECA3832ECA3831ECA3849ECA3829ECA3828ECA4226ECA3848
DVUL882 DVU_1376DVU_2985DVU_2981DVU_0361DVU_1376DVU_1377DVU_3373DVU_0360
DSP255470 CBDBA813CBDBA804CBDBA808CBDBA813CBDBA812CBDBA815CBDBA813
DSP216389 DEHABAV1_0752DEHABAV1_0745DEHABAV1_0749DEHABAV1_0752DEHABAV1_0751DEHABAV1_0753DEHABAV1_0752
DRED349161 DRED_0281DRED_0288DRED_0285DRED_2896DRED_0281DRED_0282DRED_0280DRED_0284
DPSY177439 DP2769DP1284DP2770DP2769DP2770DP0895DP2769
DOLE96561 DOLE_2037DOLE_2219DOLE_2041DOLE_2038DOLE_2037DOLE_2038DOLE_2036
DHAF138119 DSY4166DSY1371DSY2457DSY1366DSY1367DSY1365DSY1366
DETH243164 DET_0833DET_0826DET_0830DET_0832DET_0833DET_0832DET_0834DET_0833
DDES207559 DDE_2168DDE_3222DDE_3218DDE_0399DDE_2168DDE_2167DDE_0116DDE_0398
DARO159087 DARO_1620DARO_0864DARO_3071DARO_1619DARO_3075DARO_3074DARO_0302DARO_1620
CSP501479 CSE45_2368CSE45_0315CSE45_3330CSE45_2368CSE45_2369CSE45_3719CSE45_2368
CRUT413404 RMAG_0445RMAG_0099RMAG_0449RMAG_0446RMAG_0445RMAG_0446RMAG_0445
CPSY167879 CPS_4209CPS_4208CPS_3237CPS_3236CPS_3237CPS_4846CPS_4843
CPHY357809 CPHY_3358CPHY_3171CPHY_3021CPHY_3347CPHY_3021CPHY_3348CPHY_3347
CMET456442 MBOO_1443MBOO_1442MBOO_1444MBOO_1443MBOO_1444MBOO_1203MBOO_1443
CKLU431943 CKL_2157CKL_2160CKL_1617CKL_1081CKL_1617CKL_1693CKL_1081
CJEJ407148 C8J_1624C8J_1625C8J_0537C8J_0536C8J_0537C8J_0012C8J_0536
CJEJ360109 JJD26997_2095JJD26997_2096JJD26997_1095JJD26997_1096JJD26997_1095JJD26997_0013JJD26997_1096
CJEJ354242 CJJ81176_0016CJJ81176_0017CJJ81176_0603CJJ81176_0602CJJ81176_0603CJJ81176_0039CJJ81176_0602
CJEJ195099 CJE_1888CJE_1889CJE_0678CJE_0677CJE_0678CJE_0012CJE_0677
CJEJ192222 CJ1718CCJ1719CCJ0575CJ0574CJ0575CJ0013CJ0574
CHYD246194 CHY_0517CHY_0524CHY_0521CHY_0518CHY_0517CHY_0518CHY_0516CHY_0517
CHOM360107 CHAB381_1165CHAB381_1264CHAB381_0491CHAB381_1165CHAB381_1166CHAB381_1769CHAB381_1165
CDES477974 DAUD_0352DAUD_1279DAUD_0355DAUD_0353DAUD_0352DAUD_0353DAUD_0540DAUD_0352
CCUR360105 CCV52592_1365CCV52592_1193CCV52592_1429CCV52592_1428CCV52592_1429CCV52592_2036CCV52592_1428
CAULO CC2100CC0193CC1541CC2100CC2101CC3044CC2100
BWEI315730 BCERKBAB4_1319BCERKBAB4_1323BCERKBAB4_1322BCERKBAB4_1320BCERKBAB4_1707BCERKBAB4_1320BCERKBAB4_1710BCERKBAB4_1707
BVIE269482 BCEP1808_1802BCEP1808_4457BCEP1808_2344BCEP1808_2348BCEP1808_2349BCEP1808_2348BCEP1808_4698
BTHU412694 BALH_1252BALH_1256BALH_1255BALH_1253BALH_1624BALH_1253BALH_1628BALH_1624
BTHU281309 BT9727_1691BT9727_1285BT9727_1284BT9727_1282BT9727_1691BT9727_1282BT9727_1694BT9727_1691
BSUB BSU28310BSU28270BSU28280BSU28300BSU28310BSU28300BSU21870BSU28310
BSP376 BRADO4946BRADO0353BRADO5528BRADO5564BRADO5562BRADO2754BRADO5564
BSP36773 BCEP18194_A5178BCEP18194_B2131BCEP18194_A5587BCEP18194_A5591BCEP18194_A5592BCEP18194_A5591BCEP18194_B1899
BSP107806 BU226BUPL05BUPL04BU225BU226BU225BU600
BPUM315750 BPUM_2472BPUM_2468BPUM_2469BPUM_2471BPUM_2472BPUM_2471BPUM_1922BPUM_2472
BLIC279010 BL00608BL00612BL00611BL00609BL00608BL00609BL05225BL00608
BJAP224911 BLR3166BLL0504BLL6435BLL6503BLL6501BLL4536BLL6503
BCLA66692 ABC2645ABC2641ABC2642ABC2645ABC2644ABC2646ABC2645
BCER572264 BCA_1452BCA_1456BCA_1455BCA_1453BCA_1856BCA_1453BCA_1859BCA_1856
BCER405917 BCE_1517BCE_1521BCE_1520BCE_1518BCE_1934BCE_1518BCE_1937BCE_1934
BCER315749 BCER98_1120BCER98_1124BCER98_1123BCER98_1121BCER98_1120BCER98_1121BCER98_1446BCER98_1120
BCER288681 BCE33L1282BCE33L1286BCE33L1285BCE33L1283BCE33L1666BCE33L1283BCE33L1669BCE33L1666
BCER226900 BC_1777BC_1401BC_1400BC_1398BC_1777BC_1398BC_1780BC_1777
BCEN331272 BCEN2424_1878BCEN2424_3952BCEN2424_2259BCEN2424_2264BCEN2424_2265BCEN2424_2264BCEN2424_4135
BCEN331271 BCEN_6201BCEN_4415BCEN_1648BCEN_1653BCEN_1654BCEN_1653BCEN_4231
BANT592021 BAA_1919BAA_1488BAA_1487BAA_1485BAA_1919BAA_1485BAA_1922BAA_1919
BANT568206 BAMEG_2742BAMEG_3174BAMEG_3175BAMEG_3177BAMEG_2742BAMEG_3177BAMEG_2739BAMEG_2742
BANT261594 GBAA1850GBAA1421GBAA1420GBAA1418GBAA1850GBAA1418GBAA1853GBAA1850
BANT260799 BAS1714BAS1312BAS1311BAS1309BAS1714BAS1309BAS1717BAS1714
BAMY326423 RBAM_025370RBAM_025330RBAM_025340RBAM_025360RBAM_025370RBAM_025360RBAM_020010RBAM_025370
BAMB398577 BAMMC406_1787BAMMC406_3847BAMMC406_2176BAMMC406_2180BAMMC406_2181BAMMC406_2180BAMMC406_4027
BAMB339670 BAMB_1815BAMB_3343BAMB_2298BAMB_2302BAMB_2303BAMB_2302BAMB_3546
AVAR240292 AVA_2757AVA_2987AVA_2111AVA_2035AVA_2757AVA_2035AVA_0023AVA_2757
ASP76114 EBA4760EBA7154EBB162EBA7130EBA7132EBA1822EBA4751
ASP62928 AZO1041AZO3162AZO1035AZO3154AZO3155AZO0632AZO1034
ASAL382245 ASA_3404ASA_3410ASA_3409ASA_3403ASA_3404ASA_3403ASA_0122ASA_0119
APLE434271 APJL_0729APJL_0458APJL_0414APJL_0730APJL_0729APJL_0730APJL_0097APJL_0099
APLE416269 APL_0727APL_0432APL_0393APL_0728APL_0727APL_0728APL_0097
AMET293826 AMET_3455AMET_3458AMET_3419AMET_3400AMET_3403AMET_3534AMET_3418
AMAR329726 AM1_3085AM1_0898AM1_0705AM1_2118AM1_3085AM1_2118AM1_3085
AHYD196024 AHA_0887AHA_0881AHA_0882AHA_0889AHA_0887AHA_0889AHA_4202AHA_4204
AFUL224325 AF_1720AF_0628AF_0219AF_1719AF_1720AF_1719AF_1014AF_1720
AFER243159 AFE_1020AFE_0506AFE_2294AFE_2295AFE_2294AFE_2378AFE_2295
ADEH290397 ADEH_1978ADEH_2070ADEH_1981ADEH_1977ADEH_1978ADEH_1977ADEH_4111ADEH_1978
ACRY349163 ACRY_1157ACRY_2147ACRY_0534ACRY_2832ACRY_2833ACRY_2832ACRY_1046
ACAU438753 AZC_3488AZC_0304AZC_3545AZC_2376AZC_2375AZC_3530AZC_2376
ABUT367737 ABU_1013ABU_0456ABU_1157ABU_1156ABU_1157ABU_2100ABU_1156
ABOR393595 ABO_0481ABO_1467ABO_0638ABO_0482ABO_0481ABO_0482ABO_2312
AAEO224324 AQ_451AQ_244AQ_2090AQ_451AQ_1851AQ_837AQ_451


Organism features enriched in list (features available for 233 out of the 244 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00695092792
Disease:Bubonic_plague 0.003918866
Disease:Dysentery 0.003918866
Disease:Food_poisoning 0.000236799
Disease:Gastroenteritis 0.00011121213
Endospores:No 0.000028262211
GC_Content_Range4:0-40 6.395e-1051213
GC_Content_Range4:40-60 2.854e-14133224
GC_Content_Range7:0-30 7.257e-8347
GC_Content_Range7:30-40 0.000184648166
GC_Content_Range7:40-50 1.720e-669117
GC_Content_Range7:50-60 2.332e-664107
Genome_Size_Range5:0-2 2.040e-736155
Genome_Size_Range5:2-4 0.001332363197
Genome_Size_Range5:4-6 1.595e-13114184
Genome_Size_Range9:0-1 0.0000133127
Genome_Size_Range9:1-2 0.000311135128
Genome_Size_Range9:2-3 0.001091734120
Genome_Size_Range9:4-5 5.086e-65896
Genome_Size_Range9:5-6 6.929e-75688
Gram_Stain:Gram_Neg 0.0001112154333
Gram_Stain:Gram_Pos 1.505e-930150
Habitat:Aquatic 1.171e-75991
Habitat:Host-associated 1.103e-1440206
Motility:No 3.436e-931151
Motility:Yes 1.326e-11146267
Optimal_temp.:- 0.0000968124257
Optimal_temp.:37 0.000542028106
Oxygen_Req:Aerobic 1.815e-942185
Oxygen_Req:Facultative 0.000527598201
Pathogenic_in:Human 0.000236866213
Pathogenic_in:No 0.0000315113226
Shape:Coccus 1.625e-81182
Shape:Rod 0.0004613157347
Shape:Sphere 0.0042128219
Temp._range:Psychrophilic 0.000236799



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 154
Effective number of orgs (counting one per cluster within 468 clusters): 110

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 71
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SMAR399550 ncbi Staphylothermus marinus F10
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97901
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PAER178306 ncbi Pyrobaculum aerophilum IM21
PACN267747 ncbi Propionibacterium acnes KPA1712020
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
MXAN246197 ncbi Myxococcus xanthus DK 16220
MSYN262723 ncbi Mycoplasma synoviae 530
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MART243272 ncbi Mycoplasma arthritidis 158L3-10
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM0
ILOI283942 ncbi Idiomarina loihiensis L2TR0
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1121
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250171
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BQUI283165 ncbi Bartonella quintana Toulouse0
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0


Names of the homologs of the genes in the group in each of these orgs
  EG11583   EG11577   EG11226   EG10502   EG10500   EG10499   EG10496   EG10494   
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TVOL273116
TPEN368408
TPAL243276
TLET416591
TKOD69014
TDEN243275
TACI273075
STOK273063 ST0538
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SMAR399550
SAGA211110
SAGA208435
SAGA205921
SACI330779 SACI_0940
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PTOR263820 PTO0913
PPEN278197
PISL384616 PISL_1814
PINT246198
PHOR70601
PGIN242619
PAST100379
PARS340102 PARS_2063
PAER178306 PAE1993
PACN267747
OTSU357244
NSEN222891
MXAN246197
MSYN262723
MSED399549 MSED_0623
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MHYO295358
MHYO262722
MHYO262719
MGEN243273
MFLO265311
MCAP340047
MART243272
LSAK314315
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668
LJOH257314
LINT363253
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LACI272621
ILOI283942
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HDUC233412
HBUT415426
HACI382638
FTUL458234
FTUL418136
FTUL401614 FTN_0059
FTUL393115
FTUL393011
FTUL351581
FRANT
FPHI484022 FPHI_0772
FNUC190304
FNOD381764
FMAG334413
ERUM302409
ERUM254945
EFAE226185
ECHA205920
ECAN269484
DNOD246195
CTRA471473
CTRA471472
CTET212717
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380
CPER195103
CPER195102
CNOV386415 NT01CX_2027
CMUR243161
CMAQ397948 CMAQ_1171
CFEL264202
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT536232
CBOT515621
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CABO218497
BTUR314724
BQUI283165
BHER314723
BGAR290434
BCIC186490
BBUR224326
BBAC360095
BBAC264462
BAFZ390236
AYEL322098
AURANTIMONAS
APHA212042
APER272557
AORE350688
AMAR234826
ALAI441768


Organism features enriched in list (features available for 144 out of the 154 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00587803292
Arrangment:Pairs 0.000600815112
Disease:Botulism 0.000871955
Disease:Legionnaire's_disease 0.003605944
Disease:None 0.0002109458
Disease:Pharyngitis 0.000011988
Disease:Tularemia 0.000871955
Disease:Wide_range_of_infections 1.552e-71111
Disease:bronchitis_and_pneumonitis 0.000011988
Endospores:No 0.004907364211
GC_Content_Range4:0-40 2.867e-23103213
GC_Content_Range4:40-60 0.000196838224
GC_Content_Range4:60-100 5.043e-173145
GC_Content_Range7:0-30 6.411e-133447
GC_Content_Range7:30-40 4.492e-969166
GC_Content_Range7:50-60 2.076e-69107
GC_Content_Range7:60-70 2.658e-153134
Genome_Size_Range5:0-2 1.559e-3598155
Genome_Size_Range5:4-6 2.819e-224184
Genome_Size_Range5:6-10 0.0000146147
Genome_Size_Range9:0-1 3.835e-82027
Genome_Size_Range9:1-2 2.930e-2478128
Genome_Size_Range9:4-5 7.502e-9496
Habitat:Aquatic 5.952e-6791
Habitat:Host-associated 7.281e-1387206
Habitat:Multiple 0.000539729178
Habitat:Terrestrial 0.0065896231
Motility:Yes 8.562e-644267
Optimal_temp.:- 0.006534152257
Optimal_temp.:37 1.198e-850106
Pathogenic_in:Animal 0.00446452566
Pathogenic_in:Human 1.123e-779213
Pathogenic_in:No 2.768e-731226
Salinity:Non-halophilic 0.005482936106
Shape:Rod 0.005774974347
Shape:Sphere 6.038e-71519
Temp._range:Hyperthermophilic 0.00845661123



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 61
Effective number of orgs (counting one per cluster within 468 clusters): 57

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
AFUL224325 ncbi Archaeoglobus fulgidus DSM 4304 6.579e-64968
MKAN190192 ncbi Methanopyrus kandleri AV19 0.00001042907
PMAR59920 ncbi Prochlorococcus marinus NATL2A 0.00001295398
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP1375 0.00001455478
PMAR167555 ncbi Prochlorococcus marinus NATL1A 0.00001515508
DETH243164 ncbi Dehalococcoides ethenogenes 195 0.00002135748
MAEO419665 ncbi Methanococcus aeolicus Nankai-3 0.00003453447
MLAB410358 ncbi Methanocorpusculum labreanum Z 0.00005023637
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 2661 0.00005853717
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H 0.00007313837
MTHE349307 ncbi Methanosaeta thermophila PT 0.00009733997
MMAR267377 ncbi Methanococcus maripaludis S2 0.00011764107
CMET456442 ncbi Candidatus Methanoregula boonei 6A8 0.00011964117
SSP64471 ncbi Synechococcus sp. CC9311 0.00012637168
MMAR402880 ncbi Methanococcus maripaludis C5 0.00013234177
MMAR444158 ncbi Methanococcus maripaludis C6 0.00014144217
MBUR259564 ncbi Methanococcoides burtonii DSM 6242 0.00027444637
PMOB403833 ncbi Petrotoga mobilis SJ95 0.00031108018
NSP387092 ncbi Nitratiruptor sp. SB155-2 0.00032058048
MMAR368407 ncbi Methanoculleus marisnigri JR1 0.00035784817
PMAR167540 Prochlorococcus marinus pastoris MED4ax 0.00036304827
MHUN323259 ncbi Methanospirillum hungatei JF-1 0.00037904857
PMAR167542 ncbi Prochlorococcus marinus MIT 9515 0.00040134897
PMAR146891 ncbi Prochlorococcus marinus AS9601 0.00040704907
PMAR167546 ncbi Prochlorococcus marinus MIT 9301 0.00043684957
PMAR74546 ncbi Prochlorococcus marinus MIT 9312 0.00050195057
PMAR93060 ncbi Prochlorococcus marinus MIT 9215 0.00055235127
SSP387093 ncbi Sulfurovum sp. NBC37-1 0.00060418708
WSUC273121 ncbi Wolinella succinogenes DSM 1740 0.00062108738
TELO197221 ncbi Thermosynechococcus elongatus BP-1 0.00062688748
UMET351160 ncbi uncultured methanogenic archaeon RC-I 0.00109425657
SELO269084 ncbi Synechococcus elongatus PCC 6301 0.00114409428
TERY203124 ncbi Trichodesmium erythraeum IMS101 0.00119379478
SSP321327 ncbi Synechococcus sp. JA-3-3Ab 0.00122449508
SSP1148 ncbi Synechocystis sp. PCC 6803 0.00126649548
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13) 0.00130979588
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C 0.00134309618
DSP216389 ncbi Dehalococcoides sp. BAV1 0.00139255857
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen 0.00142369688
DSP255470 ncbi Dehalococcoides sp. CBDB1 0.00149455917
MAER449447 ncbi Microcystis aeruginosa NIES-843 0.00159759828
MMAZ192952 ncbi Methanosarcina mazei Go1 0.00165946007
CHOM360107 ncbi Campylobacter hominis ATCC BAA-381 0.00192486137
MBAR269797 ncbi Methanosarcina barkeri Fusaro 0.00222566267
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum) 0.00256556397
PMAR74547 ncbi Prochlorococcus marinus MIT 9313 0.00270756447
MACE188937 ncbi Methanosarcina acetivorans C2A 0.00298016537
CJEJ195099 ncbi Campylobacter jejuni RM1221 0.00367056737
CJEJ360109 ncbi Campylobacter jejuni doylei 269.97 0.00374656757
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 11168 0.00427386887
PTHE370438 ncbi Pelotomaculum thermopropionicum SI 0.004590211208
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-176 0.00467476977
SSP84588 ncbi Synechococcus sp. WH 8102 0.00481537007
SSP1131 Synechococcus sp. CC9605 0.00481537007
MMAR426368 ncbi Methanococcus maripaludis C7 0.00487154196
CJEJ407148 ncbi Campylobacter jejuni jejuni 81116 0.00541417127
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S85 0.00643077307
HMOD498761 ncbi Heliobacterium modesticaldum Ice1 0.007516811918
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00810917557
CCUR360105 ncbi Campylobacter curvus 525.92 0.00848607607
NSP103690 ncbi Nostoc sp. PCC 7120 0.008763612148


Names of the homologs of the genes in the group in each of these orgs
  EG11583   EG11577   EG11226   EG10502   EG10500   EG10499   EG10496   EG10494   
AFUL224325 AF_1720AF_0628AF_0219AF_1719AF_1720AF_1719AF_1014AF_1720
MKAN190192 MK0531MK0391MK0545MK0531MK0545MK1197MK0531
PMAR59920 PMN2A_1858PMN2A_0194PMN2A_0686PMN2A_0764PMN2A_1858PMN2A_0764PMN2A_0180PMN2A_1858
PMAR167539 PRO_0526PRO_0862PRO_1134PRO_1251PRO_0526PRO_1251PRO_0847PRO_0526
PMAR167555 NATL1_05831NATL1_08261NATL1_15201NATL1_16041NATL1_05831NATL1_16041NATL1_08121NATL1_05831
DETH243164 DET_0833DET_0826DET_0830DET_0832DET_0833DET_0832DET_0834DET_0833
MAEO419665 MAEO_0682MAEO_0849MAEO_0683MAEO_0682MAEO_0683MAEO_0680MAEO_0682
MLAB410358 MLAB_0605MLAB_0603MLAB_0606MLAB_0605MLAB_0606MLAB_0613MLAB_0605
MJAN243232 MJ_0277MJ_1195MJ_0161MJ_0277MJ_0161MJ_1276MJ_0277
MTHE187420 MTH1444MTH184MTH1481MTH1443MTH1444MTH1443MTH1444
MTHE349307 MTHE_0110MTHE_1298MTHE_0111MTHE_0110MTHE_0111MTHE_0673MTHE_0110
MMAR267377 MMP0650MMP1063MMP0651MMP0650MMP0651MMP0318MMP0650
CMET456442 MBOO_1443MBOO_1442MBOO_1444MBOO_1443MBOO_1444MBOO_1203MBOO_1443
SSP64471 GSYN2129GSYN1830GSYN1052GSYN0962GSYN2129GSYN0962GSYN1809GSYN2129
MMAR402880 MMARC5_0954MMARC5_0531MMARC5_0953MMARC5_0954MMARC5_0953MMARC5_1356MMARC5_0954
MMAR444158 MMARC6_0239MMARC6_1596MMARC6_0238MMARC6_0239MMARC6_0238MMARC6_0633MMARC6_0239
MBUR259564 MBUR_0710MBUR_0711MBUR_0709MBUR_0710MBUR_0709MBUR_2246MBUR_0710
PMOB403833 PMOB_1592PMOB_1586PMOB_1589PMOB_1591PMOB_1592PMOB_1591PMOB_1593PMOB_1592
NSP387092 NIS_0810NIS_0727NIS_1407NIS_0811NIS_0810NIS_0811NIS_0126NIS_0810
MMAR368407 MEMAR_1070MEMAR_1069MEMAR_1071MEMAR_1070MEMAR_1071MEMAR_0985MEMAR_1070
PMAR167540 PMM0786PMM1066PMM1154PMM0526PMM1154PMM0774PMM0526
MHUN323259 MHUN_1242MHUN_1243MHUN_1241MHUN_1242MHUN_1241MHUN_0139MHUN_1242
PMAR167542 P9515ORF_0836P9515ORF_1208P9515ORF_1381P9515ORF_0626P9515ORF_1381P9515ORF_0850P9515ORF_0626
PMAR146891 A9601_08501A9601_11711A9601_13311A9601_05821A9601_13311A9601_08361A9601_05821
PMAR167546 P9301ORF_0863P9301ORF_1193P9301ORF_1367P9301ORF_0565P9301ORF_1367P9301ORF_0850P9301ORF_0565
PMAR74546 PMT9312_0794PMT9312_1077PMT9312_1253PMT9312_0526PMT9312_1253PMT9312_0782PMT9312_0526
PMAR93060 P9215_08811P9215_12011P9215_13601P9215_06071P9215_13601P9215_08681P9215_06071
SSP387093 SUN_1823SUN_1705SUN_1956SUN_1822SUN_1823SUN_1822SUN_2427SUN_1823
WSUC273121 WS0103WS1813WS0624WS0102WS0103WS0102WS0130WS0103
TELO197221 TLR1296TLR1600TLL1397TLL0880TLR1296TLL0880TLL1057TLR1296
UMET351160 LRC534RCIX673LRC533LRC534LRC533RCIX1841LRC534
SELO269084 SYC1366_CSYC2490_CSYC0145_DSYC1672_CSYC1366_CSYC1672_CSYC0898_CSYC1366_C
TERY203124 TERY_2843TERY_4403TERY_2253TERY_1850TERY_2843TERY_1850TERY_0019TERY_2843
SSP321327 CYA_2073CYA_1798CYA_2223CYA_2130CYA_2073CYA_2130CYA_1697CYA_2073
SSP1148 SLR2088SLR1517SLR0186SLL0065SLR2088SLL0065SLR0452SLR2088
SSP321332 CYB_0648CYB_1631CYB_1442CYB_0971CYB_0648CYB_0971CYB_1987CYB_0648
CDES477974 DAUD_0352DAUD_1279DAUD_0355DAUD_0353DAUD_0352DAUD_0353DAUD_0540DAUD_0352
DSP216389 DEHABAV1_0752DEHABAV1_0745DEHABAV1_0749DEHABAV1_0752DEHABAV1_0751DEHABAV1_0753DEHABAV1_0752
SWOL335541 SWOL_2146SWOL_2140SWOL_2143SWOL_2145SWOL_2146SWOL_2145SWOL_2147SWOL_2146
DSP255470 CBDBA813CBDBA804CBDBA808CBDBA813CBDBA812CBDBA815CBDBA813
MAER449447 MAE_50700MAE_00210MAE_54460MAE_48120MAE_50700MAE_48120MAE_28670MAE_50700
MMAZ192952 MM0670MM1284MM0669MM0670MM0669MM0259MM0670
CHOM360107 CHAB381_1165CHAB381_1264CHAB381_0491CHAB381_1165CHAB381_1166CHAB381_1769CHAB381_1165
MBAR269797 MBAR_A0218MBAR_A0942MBAR_A0219MBAR_A0218MBAR_A0219MBAR_A2069MBAR_A0218
BSP107806 BU226BUPL05BUPL04BU225BU226BU225BU600
PMAR74547 PMT1239PMT0531PMT1121PMT1176PMT1239PMT1176PMT1239
MACE188937 MA3792MA4615MA3791MA3792MA3791MA1802MA3792
CJEJ195099 CJE_1888CJE_1889CJE_0678CJE_0677CJE_0678CJE_0012CJE_0677
CJEJ360109 JJD26997_2095JJD26997_2096JJD26997_1095JJD26997_1096JJD26997_1095JJD26997_0013JJD26997_1096
CJEJ192222 CJ1718CCJ1719CCJ0575CJ0574CJ0575CJ0013CJ0574
PTHE370438 PTH_0530PTH_0534PTH_0531PTH_0736PTH_0527PTH_0528PTH_0526PTH_0527
CJEJ354242 CJJ81176_0016CJJ81176_0017CJJ81176_0603CJJ81176_0602CJJ81176_0603CJJ81176_0039CJJ81176_0602
SSP84588 SYNW0784OR1664SYNW0730OR1620SYNW0680OR1970SYNW1746OR2980SYNW0680OR1970SYNW1123OR3467SYNW1746OR2980
SSP1131 SYNCC9605_0717SYNCC9605_1865SYNCC9605_1939SYNCC9605_1989SYNCC9605_1989SYNCC9605_1260SYNCC9605_0717
MMAR426368 MMARC7_1674MMARC7_0316MMARC7_1675MMARC7_1675MMARC7_1320MMARC7_1674
CJEJ407148 C8J_1624C8J_1625C8J_0537C8J_0536C8J_0537C8J_0012C8J_0536
FSUC59374 FSU3213FSU2908FSU3283FSU3284FSU3283FSU0787FSU3284
HMOD498761 HM1_1979HM1_1518HM1_1515HM1_1980HM1_1979HM1_1512HM1_1511HM1_1514
CRUT413404 RMAG_0445RMAG_0099RMAG_0449RMAG_0446RMAG_0445RMAG_0446RMAG_0445
CCUR360105 CCV52592_1365CCV52592_1193CCV52592_1429CCV52592_1428CCV52592_1429CCV52592_2036CCV52592_1428
NSP103690 ALL4613ALR1313ALR4840ALR4627ALL4613ALR4627ALR2771ALL4613


Organism features enriched in list (features available for 59 out of the 61 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.000771559
Arrangment:Pairs 0.00019992112
Disease:Food_poisoning 0.007294449
Disease:None 0.00562701258
GC_Content_Range4:60-100 0.00014934145
GC_Content_Range7:60-70 0.00046484134
Genome_Size_Range5:0-2 4.772e-631155
Genome_Size_Range5:4-6 1.608e-64184
Genome_Size_Range9:1-2 1.641e-730128
Genome_Size_Range9:4-5 0.0011109296
Genome_Size_Range9:5-6 0.0025002288
Gram_Stain:Gram_Neg 0.003113224333
Gram_Stain:Gram_Pos 0.00001603150
Habitat:Aquatic 2.068e-82691
Habitat:Host-associated 3.384e-66206
Optimal_temp.:- 0.000184039257
Optimal_temp.:35-40 0.000989433
Oxygen_Req:Aerobic 1.907e-73185
Oxygen_Req:Anaerobic 1.172e-828102
Oxygen_Req:Facultative 2.057e-83201
Oxygen_Req:Microaerophilic 0.0008669718
Pathogenic_in:Animal 0.0047290166
Pathogenic_in:Human 7.011e-67213
Pathogenic_in:No 8.354e-842226
Shape:Irregular_coccus 1.567e-91217
Shape:Oval 0.000432345
Shape:Rod 9.700e-1112347
Temp._range:Mesophilic 0.009044741473
Temp._range:Thermophilic 0.0038942935



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-901 (selenocysteine biosynthesis I (bacteria))2301490.4015



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11577   EG11226   EG10502   EG10500   EG10499   EG10496   EG10494   
EG115830.9989610.9995050.9998790.9999670.999950.998850.999872
EG115770.9997770.9985030.9989320.9991550.9985830.998847
EG112260.9995470.9996520.9997320.9986670.999398
EG105020.9999660.9999940.998520.999868
EG1050010.9990120.999972
EG104990.998820.999938
EG104960.999539
EG10494



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PAIRWISE BLAST SCORES:

  EG11583   EG11577   EG11226   EG10502   EG10500   EG10499   EG10496   EG10494   
EG115830.0f0---2.4e-79---
EG11577-0.0f0------
EG11226--0.0f0-----
EG10502---0.0f0-9.4e-7--
EG10500----0.0f0---
EG10499-----0.0f0--
EG10496------0.0f0-
EG10494-------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- LEUSYN-PWY (leucine biosynthesis) (degree of match pw to cand: 0.333, degree of match cand to pw: 0.250, average score: 0.956)
  Genes in pathway or complex:
   *in cand* 0.9991 0.9985 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
             0.9967 0.9943 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.6926 0.3213 EG11040 (tyrB) TYRB-MONOMER (TyrB)
   *in cand* 0.9995 0.9987 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
             0.9987 0.9957 EG11575 (leuD) LEUD-MONOMER (LeuD)
             0.9987 0.9957 EG11576 (leuC) LEUC-MONOMER (LeuC)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9988 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9990 0.9985 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
   *in cand* 0.9997 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9997 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
   *in cand* 0.9995 0.9985 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9996 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)

- ACETOLACTSYNI-CPLX (acetohydroxybutanoate synthase / acetolactate synthase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.250, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9985 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9997 0.9988 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9990 0.9985 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
   *in cand* 0.9997 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9997 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
   *in cand* 0.9995 0.9987 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9991 0.9985 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
   *in cand* 0.9996 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)

- BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis) (degree of match pw to cand: 0.437, degree of match cand to pw: 0.875, average score: 0.935)
  Genes in pathway or complex:
             0.9987 0.9957 EG11575 (leuD) LEUD-MONOMER (LeuD)
             0.9987 0.9957 EG11576 (leuC) LEUC-MONOMER (LeuC)
   *in cand* 0.9995 0.9987 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
             0.6926 0.3213 EG11040 (tyrB) TYRB-MONOMER (TyrB)
   *in cand* 0.9991 0.9985 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
             0.9575 0.8579 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
             0.7712 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
   *in cand* 0.9995 0.9985 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9997 0.9988 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9997 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9997 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
             0.9995 0.9981 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
             0.9967 0.9943 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
   *in cand* 0.9990 0.9985 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)

- THREOCAT-PWY (superpathway of threonine metabolism) (degree of match pw to cand: 0.208, degree of match cand to pw: 0.625, average score: 0.637)
  Genes in pathway or complex:
             0.4290 0.1415 M014 (mhpF) MHPF-MONOMER (acetaldehyde dehydrogenase 2)
             0.2274 0.0455 EG10031 (adhE) ADHE-MONOMER (AdhE)
             0.4625 0.1541 G6455 (ltaE) LTAA-MONOMER (LtaA)
             0.6173 0.1618 EG13139 (tynA) AMINEOXID-MONOMER (TynA)
             0.6314 0.3133 EG10512 (kbl) AKBLIG-MONOMER (Kbl)
             0.6322 0.1589 EG10027 (ackA) ACETATEKINA-MONOMER (propionate kinase / acetate kinase)
             0.7203 0.0912 EG11172 (tdcD) PROPKIN-MONOMER (propionate kinase)
             0.4952 0.0033 EG20173 (pta) PHOSACETYLTRANS-MONOMER (Pta)
             0.3289 0.0774 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
             0.3474 0.1011 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
             0.9611 0.8625 EG10990 (tdcB) THREDEHYDCAT-MONOMER (TdcB)
             0.9575 0.8579 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
             0.7712 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
   *in cand* 0.9995 0.9985 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9997 0.9988 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9997 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9997 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
             0.9995 0.9981 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
             0.9967 0.9943 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
   *in cand* 0.9990 0.9985 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.7764 0.4570 EG11904 (gldA) GLYCDEH-MONOMER (GldA)
             0.8294 0.5870 EG10993 (tdh) THREODEHYD-MONOMER (Tdh)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9987 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9991 0.9985 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
   *in cand* 0.9996 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)

- VALSYN-PWY (valine biosynthesis) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.625, average score: 0.972)
  Genes in pathway or complex:
   *in cand* 0.9990 0.9985 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.9967 0.9943 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.9995 0.9981 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
   *in cand* 0.9995 0.9985 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9997 0.9988 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
             0.7712 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
   *in cand* 0.9997 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9997 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9987 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9991 0.9985 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
   *in cand* 0.9996 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)

- ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.250, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9997 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9997 0.9988 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9990 0.9985 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
   *in cand* 0.9995 0.9985 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9995 0.9987 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9991 0.9985 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
   *in cand* 0.9996 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)

- ILEUSYN-PWY (isoleucine biosynthesis I (from threonine)) (degree of match pw to cand: 0.455, degree of match cand to pw: 0.625, average score: 0.973)
  Genes in pathway or complex:
   *in cand* 0.9990 0.9985 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.9967 0.9943 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.9995 0.9981 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
   *in cand* 0.9997 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9997 0.9989 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
   *in cand* 0.9995 0.9985 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9997 0.9988 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
             0.7712 0.3030 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
             0.9575 0.8579 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9987 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
   *in cand* 0.9991 0.9985 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
   *in cand* 0.9996 0.9989 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10499 EG10500 (centered at EG10499)
EG11226 EG11577 (centered at EG11226)
EG10496 (centered at EG10496)
EG11583 (centered at EG11583)
EG10494 EG10502 (centered at EG10494)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11583   EG11577   EG11226   EG10502   EG10500   EG10499   EG10496   EG10494   
322/623399/623373/623329/623387/623410/623401/623344/623
AAEO224324:0:Tyes15701305-1571138418157
AAUR290340:2:Tyes3083--2098209920980-
AAVE397945:0:Tyes-01860186318641863283-
ABAC204669:0:Tyes-01--190192191
ABAU360910:0:Tyes23571954-2356235723560-
ABOR393595:0:Tyes010071591011863-
ABUT367737:0:Tyes-55506996986991640698
ACAU438753:0:Tyes321903277-2099209832622099
ACEL351607:0:Tyes0--101-0
ACRY349163:8:Tyes62116200231023112310514-
ADEH290397:0:Tyes193401021541
AEHR187272:0:Tyes-807133125-1250-
AFER243159:0:Tyes-502017591760175918431760
AFUL224325:0:Tyes148240001481148214817841482
AHYD196024:0:Tyes60186831973199
AMAR329726:9:Tyes23551890139723551397-2355
AMET293826:0:Tyes-5558190313218
ANAE240017:0:Tyes---0-01404-
APLE416269:0:Tyes6303382986316306310-
APLE434271:0:Tno59834630759959859902
ASAL382245:5:Tyes31593165316431583159315830
ASP1667:3:Tyes1160--0102-
ASP232721:2:Tyes-20836716676666670-
ASP62928:0:Tyes-4262576420256825690419
ASP62977:0:Tyes-0-245124522451760-
ASP76114:2:Tyes-1740311817343104310501733
AVAR240292:3:Tyes27462976210120252746202502746
BABO262698:0:Tno-0------
BABO262698:1:Tno1229---1229122801229
BAMB339670:2:Tno-0----202-
BAMB339670:3:Tno0-504508509508--
BAMB398577:2:Tno-0----179-
BAMB398577:3:Tno0-403407408407--
BAMY326423:0:Tyes5355315325345355340535
BANT260799:0:Tno4013204010404401
BANT261594:2:Tno3933203930396393
BANT568206:2:Tyes3424425427342703
BANT592021:2:Tno4233204230426423
BAPH198804:0:Tyes1--010356-
BAPH372461:0:Tyes----10248-
BBRO257310:0:Tyes34861723-3485458234850-
BCAN483179:0:Tno-0------
BCAN483179:1:Tno1274---1274127301274
BCEN331271:0:Tno0-------
BCEN331271:1:Tno-180----0-
BCEN331271:2:Tno--0565--
BCEN331272:2:Tyes-0----182-
BCEN331272:3:Tyes0-381386387386--
BCER226900:1:Tyes3733203730375373
BCER288681:0:Tno04313801383380
BCER315749:1:Tyes0431013190
BCER405917:1:Tyes04313981401398
BCER572264:1:Tno04313931396393
BCLA66692:0:Tyes401-4354
BFRA272559:1:Tyes-04---284-
BFRA295405:0:Tno-04---327-
BHAL272558:0:Tyes-013-35-
BHEN283166:0:Tyes----934-0934
BJAP224911:0:Fyes268405975-6043604140606043
BLIC279010:0:Tyes6186146156176186170618
BLON206672:0:Tyes---0-01496-
BMAL243160:0:Tno-0------
BMAL243160:1:Tno1--010--
BMAL320388:0:Tno-0------
BMAL320388:1:Tno0-5101--
BMAL320389:0:Tyes-0------
BMAL320389:1:Tyes0-5101--
BMEL224914:0:Tno-0------
BMEL224914:1:Tno0---0112540
BMEL359391:0:Tno-0------
BMEL359391:1:Tno1188---1188118701188
BOVI236:0:Tyes-0------
BOVI236:1:Tyes1115---1115111401115
BPAR257311:0:Tno28571443-2856378228560-
BPER257313:0:Tyes4381064-4394384390-
BPET94624:0:Tyes01441-1012949-
BPSE272560:0:Tyes-0------
BPSE272560:1:Tyes268-5101--
BPSE320372:0:Tno-0------
BPSE320372:1:Tno1109-6101--
BPSE320373:0:Tno-0------
BPSE320373:1:Tno952-5101--
BPUM315750:0:Tyes5455415425445455440545
BSP107806:1:Tyes-10-----
BSP107806:2:Tyes1--010369-
BSP36773:1:Tyes-230----0-
BSP36773:2:Tyes0-426430431430--
BSP376:0:Tyes435504910-4945494322634945
BSUB:0:Tyes6666626636656666650666
BSUI204722:0:Tyes-0------
BSUI204722:1:Tyes1247---1247124601247
BSUI470137:0:Tno-0------
BSUI470137:1:Tno1295---1295129401295
BTHA271848:0:Tno-0------
BTHA271848:1:Tno1097-5101--
BTHE226186:0:Tyes-04---228-
BTHU281309:1:Tno4073204070410407
BTHU412694:1:Tno04313511354351
BTRI382640:1:Tyes----1305-01305
BVIE269482:6:Tyes-0----234-
BVIE269482:7:Tyes0-537541542541--
BWEI315730:4:Tyes04313801383380
BXEN266265:1:Tyes-0----224-
CACE272562:1:Tyes-2-7-710
CAULO:0:Tyes193201369-1932193328931932
CBEI290402:0:Tyes-4-2400-012842399
CBLO203907:0:Tyes-01---454457
CBLO291272:0:Tno-01---466469
CBOT508765:1:Tyes-3-368-04369
CCHL340177:0:Tyes40--4254
CCON360104:2:Tyes-369582101-0
CCUR360105:0:Tyes-8104329579569570956
CDES477974:0:Tyes089231011720
CDIF272563:1:Tyes-0----1055-
CDIP257309:0:Tyes2---2302
CEFF196164:0:Fyes3--43403
CFET360106:0:Tyes-203517101-0
CGLU196627:0:Tyes3--43403
CHOM360107:1:Tyes6637610-6636641239663
CHUT269798:0:Tyes-30-----
CHYD246194:0:Tyes18521201
CJAP155077:0:Tyes1841226-1851841850-
CJEI306537:0:Tyes1---1051
CJEJ192222:0:Tyes-166116625425415420541
CJEJ195099:0:Tno-181718186496486490648
CJEJ354242:2:Tyes-161016115375365370536
CJEJ360109:0:Tyes-1941194210121013101201013
CJEJ407148:0:Tno-166216635435425430542
CKLU431943:1:Tyes-1069107253605366120
CKOR374847:0:Tyes--0---705-
CMAQ397948:0:Tyes--0-----
CMET456442:0:Tyes248-2472492482490248
CMIC31964:2:Tyes1--21201
CMIC443906:2:Tyes1--21201
CNOV386415:0:Tyes------0-
CPEL335992:0:Tyes02471382-0---
CPHY357809:0:Tyes-33314803220323322
CPSY167879:0:Tyes-93393210115591556
CRUT413404:0:Tyes3220326323322323-322
CSAL290398:0:Tyes-1995-101--
CSP501479:7:Fyes--0---386-
CSP501479:8:Fyes20230--20232024-2023
CSP78:2:Tyes-01275-31603162-3160
CSUL444179:0:Tyes-03-----
CTEP194439:0:Tyes30--3243
CVES412965:0:Tyes-0295292291292-291
CVIO243365:0:Tyes-22429101712-
DARO159087:0:Tyes1340578279513392799279801340
DDES207559:0:Tyes208431563152285208420830284
DETH243164:0:Tyes70467687
DGEO319795:0:Tyes0-------
DGEO319795:1:Tyes-43102-2-3
DHAF138119:0:Tyes28356-11181201
DOLE96561:0:Tyes118752120-
DPSY177439:2:Tyes1924400-19251924192501924
DRAD243230:3:Tyes-636344---0377
DRED349161:0:Tyes18526311204
DSHI398580:5:Tyes-0525-1725172748-
DSP216389:0:Tyes704-7687
DSP255470:0:Tno704-7687
DVUL882:1:Tyes10112611260711011101229970
ECAR218491:0:Tyes143221041221
ECOL199310:0:Tno5130144126745084505
ECOL316407:0:Tno4250135244534233523
ECOL331111:6:Tno4470139403440383941
ECOL362663:0:Tno4880137934538783876
ECOL364106:1:Tno49290141325642304227
ECOL405955:2:Tyes4070136593437433740
ECOL409438:6:Tyes4680139526740584055
ECOL413997:0:Tno3870134994535983500
ECOL439855:4:Tno4580138385639303927
ECOL469008:0:Tno31023503350213499349842380
ECOL481805:0:Tno30983568356703564356342294232
ECOL585034:0:Tno4320137255638323829
ECOL585035:0:Tno4190138884539813978
ECOL585055:0:Tno4470140165641204117
ECOL585056:2:Tno4760141264642264223
ECOL585057:0:Tno50141965629414197
ECOL585397:0:Tno4330141625642564253
ECOL83334:0:Tno5000146364547364733
ECOLI:0:Tno4350136654537683666
ECOO157:0:Tno4960146554547544751
EFER585054:1:Tyes40138294536133830
ELIT314225:0:Tyes-570--10-1
ESP42895:1:Tyes611608609161161240320
FALN326424:0:Tyes1--0109711
FJOH376686:0:Tyes-01589---19391586
FPHI484022:1:Tyes-0------
FSP106370:0:Tyes1--0108891
FSP1855:0:Tyes0--10161190
FSUC59374:0:Tyes-2354205724232424242302424
FTUL401614:0:Tyes-0------
GBET391165:0:Tyes-2060-98466-
GFOR411154:0:Tyes1730----17
GKAU235909:1:Tyes6226186196216226210622
GMET269799:1:Tyes6590664660659660658659
GOXY290633:5:Tyes-01528-8918922286-
GSUL243231:0:Tyes5971045465
GTHE420246:1:Tyes6496456466486496480649
GURA351605:0:Tyes26630265826622663266226642663
GVIO251221:0:Tyes217224491170021720-2172
HARS204773:0:Tyes0833857853852853371-
HAUR316274:2:Tyes100791091110
HCHE349521:0:Tyes33640335333633364336332994282
HHAL349124:0:Tyes-112704-4--
HHEP235279:0:Tyes-296-131413014
HINF281310:0:Tyes5012382375025015020-
HINF374930:0:Tyes1261262010514-
HINF71421:0:Tno8312482478308318300-
HMAR272569:8:Tyes--12391-1-0
HMOD498761:0:Tyes46674467466103
HMUK485914:1:Tyes--02636-2636--
HNEP81032:0:Tyes-0380-3913891339391
HSOM205914:1:Tyes-248249---1970
HSOM228400:0:Tno-716717---2040
HWAL362976:1:Tyes--01365-13651678-
IHOS453591:0:Tyes--23---0-
JSP290400:1:Tyes-03557-17841780-1784
JSP375286:0:Tyes018211797180118021801--
KPNE272620:2:Tyes89389089108938941731
KRAD266940:2:Fyes577--576-5760577
LBIF355278:2:Tyes-4530493-493-494
LBIF456481:2:Tno-4700510-510-511
LBOR355276:1:Tyes-395534123-1230122
LBOR355277:1:Tno-6922461-18750
LCHO395495:0:Tyes05431778178217831782-1783
LINN272626:1:Tno-54-1201
LINT189518:1:Tyes-050421422421811422
LINT267671:1:Tno-65461230330230301629
LLAC272622:5:Tyes0811-0--0
LLAC272623:0:Tyes-0---7--
LMES203120:1:Tyes-01---9-
LMON169963:0:Tno-54-1201
LMON265669:0:Tyes-54-1201
LSPH444177:1:Tyes401-4354
LWEL386043:0:Tyes-54-1201
LXYL281090:0:Tyes1--0102-
MABS561007:1:Tyes1--01013181
MACE188937:0:Tyes1930-274119291930192901930
MAEO419665:0:Tyes2-16732302
MAER449447:0:Tyes50870546548255087482528655087
MAQU351348:2:Tyes0669157410115201215
MAVI243243:0:Tyes---0-01125-
MBAR269797:1:Tyes0-72510118320
MBOV233413:0:Tno2866--28652866286502866
MBOV410289:0:Tno2822--28212822282102822
MBUR259564:0:Tyes1-201014591
MCAP243233:0:Tyes194019819519419518194
MEXT419610:0:Tyes-0149-233623381502336
MFLA265072:0:Tyes-13601761776177517760-
MGIL350054:3:Tyes1--0109351
MHUN323259:0:Tyes1090-109110891090108901090
MJAN243232:2:Tyes121-1060012101143121
MKAN190192:0:Tyes143-0157143157818143
MLAB410358:0:Tyes2-0323102
MLEP272631:0:Tyes1--010-1
MLOT266835:2:Tyes03222--9449433987944
MMAG342108:0:Tyes9711533976-9719720971
MMAR267377:0:Tyes337-7533383373380337
MMAR368407:0:Tyes86-85878687086
MMAR394221:0:Tyes-04----6
MMAR402880:1:Tyes415-0414415414809415
MMAR426368:0:Tyes1390-01391-139110351390
MMAR444158:0:Tyes1-13920103971
MMAZ192952:0:Tyes415-10484144154140415
MPET420662:1:Tyes4610-43--
MSED399549:0:Tyes--0-----
MSME246196:0:Tyes4147--10751074107501074
MSP164756:1:Tno0--101-0
MSP164757:0:Tno0--101-0
MSP189918:2:Tyes0--101-0
MSP266779:3:Tyes01898--0111770
MSP400668:0:Tyes-780-1012462-
MSP409:2:Tyes-61681158-10-1
MSTA339860:0:Tyes1-1710-01534-
MSUC221988:0:Tyes7430174274374216671671
MTBCDC:0:Tno3029--30283029302803029
MTBRV:0:Tno2846--28452846284502846
MTHE187420:0:Tyes125901296125812591258-1259
MTHE264732:0:Tyes60356576
MTHE349307:0:Tyes0-11661015530
MTUB336982:0:Tno2812--28112812281102812
MTUB419947:0:Tyes2938--29372938293702938
MVAN350058:0:Tyes947--9489479480947
NARO279238:0:Tyes-904--4894900489
NEUR228410:0:Tyes123959512341238123912380-
NEUT335283:2:Tyes1130961121131121074-
NFAR247156:2:Tyes1237--12361237123612390
NGON242231:0:Tyes-0152493494493120-
NHAM323097:2:Tyes247233062465-2472247102472
NMEN122586:0:Tno-038517518517148-
NMEN122587:0:Tyes-161046346446380-
NMEN272831:0:Tno-124038638738646-
NMEN374833:0:Tno-175048648748680-
NMUL323848:3:Tyes-14520202120--
NOCE323261:1:Tyes147801474147714781477957-
NPHA348780:2:Tyes--0792-792--
NSP103690:6:Tyes33350356633493335334914763335
NSP35761:1:Tyes1--010-1
NSP387092:0:Tyes71763413187187177180717
NWIN323098:0:Tyes215326102148-2153215202153
OANT439375:4:Tyes-0------
OANT439375:5:Tyes358---1726172701726
OCAR504832:0:Tyes228001015-100910101791009
OIHE221109:0:Tyes40134354
PABY272844:0:Tyes052---7-
PAER178306:0:Tyes--0-----
PAER208963:0:Tyes32621549-46934694469304694
PAER208964:0:Tno11632798-44024403440204403
PARC259536:0:Tyes0881-1017760
PARS340102:0:Tyes--0-----
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