CANDIDATE ID: 235

CANDIDATE ID: 235

NUMBER OF GENES: 8
AVERAGE SCORE:    9.9948054e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    3.7500000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG10304 (fhuC) (b0151)
   Products of gene:
     - FHUC-MONOMER (FhuC)
     - ABC-11-CPLX (iron (III) hydroxamate ABC transporter)
       Reactions:
        ATP + iron (III) hydroxamate complex[periplasmic space] + H2O  ->  ADP + phosphate + iron (III) hydroxamate complex[cytosol]
     - CPLX0-1981 (ferrichrome uptake system)
       Reactions:
        iron (III) hydroxamate complex[extracellular space]  ->  iron (III) hydroxamate complex[cytosol]

- EG10303 (fhuB) (b0153)
   Products of gene:
     - FHUB-MONOMER (FhuB)
     - ABC-11-CPLX (iron (III) hydroxamate ABC transporter)
       Reactions:
        ATP + iron (III) hydroxamate complex[periplasmic space] + H2O  ->  ADP + phosphate + iron (III) hydroxamate complex[cytosol]
     - CPLX0-1981 (ferrichrome uptake system)
       Reactions:
        iron (III) hydroxamate complex[extracellular space]  ->  iron (III) hydroxamate complex[cytosol]

- EG10298 (fepG) (b0589)
   Products of gene:
     - FEPG-MONOMER (FepG)
     - ABC-10-CPLX (ferric enterobactin ABC transporter)
       Reactions:
        ATP + ferric enterobactin[periplasmic space] + H2O  ->  ADP + phosphate + ferric enterobactin[cytosol]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]

- EG10296 (fepD) (b0590)
   Products of gene:
     - FEPD-MONOMER (FepD)
     - ABC-10-CPLX (ferric enterobactin ABC transporter)
       Reactions:
        ATP + ferric enterobactin[periplasmic space] + H2O  ->  ADP + phosphate + ferric enterobactin[cytosol]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]

- EG10295 (fepC) (b0588)
   Products of gene:
     - FEPC-MONOMER (FepC)
     - ABC-10-CPLX (ferric enterobactin ABC transporter)
       Reactions:
        ATP + ferric enterobactin[periplasmic space] + H2O  ->  ADP + phosphate + ferric enterobactin[cytosol]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]

- EG10290 (fecE) (b4287)
   Products of gene:
     - FECE-MONOMER (FecE)
     - ABC-9-CPLX (iron dicitrate ABC transporter)
       Reactions:
        ATP + ferric dicitrate[periplasmic space] + H2O  ->  ADP + phosphate + ferric dicitrate[cytosol]
     - CPLX0-2001 (ferric dicitrate uptake system)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[cytosol]

- EG10289 (fecD) (b4288)
   Products of gene:
     - FECD-MONOMER (FecD)
     - ABC-9-CPLX (iron dicitrate ABC transporter)
       Reactions:
        ATP + ferric dicitrate[periplasmic space] + H2O  ->  ADP + phosphate + ferric dicitrate[cytosol]
     - CPLX0-2001 (ferric dicitrate uptake system)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[cytosol]

- EG10288 (fecC) (b4289)
   Products of gene:
     - FECC-MONOMER (FecC)
     - ABC-9-CPLX (iron dicitrate ABC transporter)
       Reactions:
        ATP + ferric dicitrate[periplasmic space] + H2O  ->  ADP + phosphate + ferric dicitrate[cytosol]
     - CPLX0-2001 (ferric dicitrate uptake system)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[cytosol]



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ORGANISMS CONTAINING AT LEAST 7 GENES FROM THE GROUP:

Total number of orgs: 142
Effective number of orgs (counting one per cluster within 468 clusters): 92

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317587
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329537
YPES377628 ncbi Yersinia pestis Nepal5167
YPES360102 ncbi Yersinia pestis Antiqua7
YPES349746 ncbi Yersinia pestis Angola7
YPES214092 ncbi Yersinia pestis CO927
YPES187410 ncbi Yersinia pestis KIM 107
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80818
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106337
TDEN243275 ncbi Treponema denticola ATCC 354057
STHE292459 ncbi Symbiobacterium thermophilum IAM 148637
SSP644076 Silicibacter sp. TrichCH4B7
SSP1148 ncbi Synechocystis sp. PCC 68038
SSON300269 ncbi Shigella sonnei Ss0468
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153058
SPRO399741 ncbi Serratia proteamaculans 5688
SMEL266834 ncbi Sinorhizobium meliloti 10217
SMED366394 ncbi Sinorhizobium medicae WSM4198
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14357
SGLO343509 ncbi Sodalis glossinidius morsitans7
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23387
SDYS300267 ncbi Shigella dysenteriae Sd1978
SCO ncbi Streptomyces coelicolor A3(2)8
SAVE227882 ncbi Streptomyces avermitilis MA-46808
SAUR93062 ncbi Staphylococcus aureus aureus COL7
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83257
SAUR426430 ncbi Staphylococcus aureus aureus Newman7
SAUR418127 ncbi Staphylococcus aureus aureus Mu37
SAUR367830 Staphylococcus aureus aureus USA3007
SAUR359787 ncbi Staphylococcus aureus aureus JH17
SAUR359786 ncbi Staphylococcus aureus aureus JH97
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4767
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2527
SAUR273036 ncbi Staphylococcus aureus RF1228
SAUR196620 ncbi Staphylococcus aureus aureus MW27
SAUR158879 ncbi Staphylococcus aureus aureus N3157
SAUR158878 ncbi Staphylococcus aureus aureus Mu507
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99418
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170257
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170298
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.18
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332097
RETL347834 ncbi Rhizobium etli CFN 427
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a7
PPUT76869 ncbi Pseudomonas putida GB-17
PMUL272843 ncbi Pasteurella multocida multocida Pm707
PMEN399739 ncbi Pseudomonas mendocina ymp7
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO18
PFLU220664 ncbi Pseudomonas fluorescens Pf-57
PCRY335284 ncbi Psychrobacter cryohalolentis K57
PAER208964 ncbi Pseudomonas aeruginosa PAO17
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA147
OIHE221109 ncbi Oceanobacillus iheyensis HTE8318
OANT439375 ncbi Ochrobactrum anthropi ATCC 491888
NSP103690 ncbi Nostoc sp. PCC 71208
NFAR247156 ncbi Nocardia farcinica IFM 101528
MSP400668 ncbi Marinomonas sp. MWYL18
MSP266779 ncbi Chelativorans sp. BNC17
MSME246196 ncbi Mycobacterium smegmatis MC2 1557
MAQU351348 ncbi Marinobacter aquaeolei VT88
LSPH444177 ncbi Lysinibacillus sphaericus C3-418
LPLA220668 ncbi Lactobacillus plantarum WCFS17
LINN272626 ncbi Listeria innocua Clip112627
KRAD266940 ncbi Kineococcus radiotolerans SRS302168
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785788
HSP64091 ncbi Halobacterium sp. NRC-17
HSAL478009 ncbi Halobacterium salinarum R17
HCHE349521 ncbi Hahella chejuensis KCTC 23968
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237798
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-28
GKAU235909 ncbi Geobacillus kaustophilus HTA4268
ESP42895 Enterobacter sp.8
ECOO157 ncbi Escherichia coli O157:H7 EDL9338
ECOL83334 Escherichia coli O157:H78
ECOL585397 ncbi Escherichia coli ED1a8
ECOL585057 ncbi Escherichia coli IAI398
ECOL585056 ncbi Escherichia coli UMN0268
ECOL585055 ncbi Escherichia coli 559898
ECOL585035 ncbi Escherichia coli S888
ECOL481805 ncbi Escherichia coli ATCC 87398
ECOL469008 ncbi Escherichia coli BL21(DE3)8
ECOL439855 ncbi Escherichia coli SMS-3-58
ECOL413997 ncbi Escherichia coli B str. REL6068
ECOL405955 ncbi Escherichia coli APEC O18
ECOL364106 ncbi Escherichia coli UTI898
ECOL362663 ncbi Escherichia coli 5368
ECOL331111 ncbi Escherichia coli E24377A8
ECOL316407 ncbi Escherichia coli K-12 substr. W31108
ECOL199310 ncbi Escherichia coli CFT0738
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10438
DRAD243230 ncbi Deinococcus radiodurans R18
DHAF138119 ncbi Desulfitobacterium hafniense Y518
DGEO319795 ncbi Deinococcus geothermalis DSM 113007
CVIO243365 ncbi Chromobacterium violaceum ATCC 124728
CTET212717 ncbi Clostridium tetani E887
CSP501479 Citreicella sp. SE457
CSAL290398 ncbi Chromohalobacter salexigens DSM 30438
CPER289380 ncbi Clostridium perfringens SM1018
CPER195103 ncbi Clostridium perfringens ATCC 131248
CPER195102 ncbi Clostridium perfringens 137
CNOV386415 ncbi Clostridium novyi NT7
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3828
CMIC31964 ncbi Clavibacter michiganensis sepedonicus8
CJEI306537 ncbi Corynebacterium jeikeium K4118
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130327
CEFF196164 ncbi Corynebacterium efficiens YS-3147
CDIF272563 ncbi Clostridium difficile 6307
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto7
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6578
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B7
CBOT498213 ncbi Clostridium botulinum B1 str. Okra8
CBOT441772 ncbi Clostridium botulinum F str. Langeland8
CBOT441771 ncbi Clostridium botulinum A str. Hall8
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193978
CBOT36826 Clostridium botulinum A8
CACE272562 ncbi Clostridium acetobutylicum ATCC 8247
BWEI315730 ncbi Bacillus weihenstephanensis KBAB48
BTHU412694 ncbi Bacillus thuringiensis Al Hakam8
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-278
BSUB ncbi Bacillus subtilis subtilis 1688
BPUM315750 ncbi Bacillus pumilus SAFR-0328
BLIC279010 ncbi Bacillus licheniformis ATCC 145808
BHAL272558 ncbi Bacillus halodurans C-1258
BCLA66692 ncbi Bacillus clausii KSM-K168
BCER572264 ncbi Bacillus cereus 03BB1028
BCER405917 Bacillus cereus W8
BCER315749 ncbi Bacillus cytotoxicus NVH 391-988
BCER288681 ncbi Bacillus cereus E33L8
BCER226900 ncbi Bacillus cereus ATCC 145798
BANT592021 ncbi Bacillus anthracis A02488
BANT568206 ncbi Bacillus anthracis CDC 6848
BANT261594 ncbi Bacillus anthracis Ames Ancestor8
BANT260799 ncbi Bacillus anthracis Sterne8
BAMY326423 ncbi Bacillus amyloliquefaciens FZB428
BAMB398577 ncbi Burkholderia ambifaria MC40-67
BAMB339670 ncbi Burkholderia ambifaria AMMD7
AVAR240292 ncbi Anabaena variabilis ATCC 294137
ASP1667 Arthrobacter sp.7
AORE350688 ncbi Alkaliphilus oremlandii OhILAs8
AMAR329726 ncbi Acaryochloris marina MBIC110178
ACAU438753 ncbi Azorhizobium caulinodans ORS 5717
AAUR290340 ncbi Arthrobacter aurescens TC18


Names of the homologs of the genes in the group in each of these orgs
  EG10304   EG10303   EG10298   EG10296   EG10295   EG10290   EG10289   EG10288   
YPSE349747 YPSIP31758_3333YPSIP31758_3331YPSIP31758_2442YPSIP31758_2444YPSIP31758_2444YPSIP31758_3804YPSIP31758_3804
YPSE273123 YPTB0739YPTB0741YPTB1547YPTB1545YPTB1545YPTB0337YPTB0337
YPES377628 YPN_0698YPN_0700YPN_2445YPN_2447YPN_2447YPN_3387YPN_3387
YPES360102 YPA_2892YPA_2890YPA_0829YPA_0827YPA_0827YPA_4002YPA_4002
YPES349746 YPANGOLA_A0998YPANGOLA_A0996YPANGOLA_A3184YPANGOLA_A3186YPANGOLA_A3186YPANGOLA_A0647YPANGOLA_A0647
YPES214092 YPO3392YPO3390YPO1535YPO1533YPO1533YPO0280YPO0280
YPES187410 Y0796Y0798Y2635Y2637Y2637Y0540Y0540
YENT393305 YE0730YE0732YE3620YE3619YE3621YE3621YE0328YE0328
VPAR223926 VPA1436VPA1438VPA1653VPA1652VPA1652VPA1653VPA1654
TDEN243275 TDE_0625TDE_1179TDE_2357TDE_2357TDE_0625TDE_2357TDE_2357
STHE292459 STH1283STH1284STH1285STH1283STH1283STH1285STH1285
SSP644076 SCH4B_3664SCH4B_3539SCH4B_3538SCH4B_3664SCH4B_3664SCH4B_3538SCH4B_3538
SSP1148 SLR1318SLR1316SLR1317SLR1316SLR1318SLR1318SLR1317SLR1316
SSON300269 SSO_0163SSO_0165SSO_0540SSO_0541SSO_0539SSO_4459SSO_4460SSO_4461
SSAP342451 SSP2073SSP2072SSP2071SSP2072SSP2073SSP2073SSP0711SSP0710
SPRO399741 SPRO_3978SPRO_3976SPRO_3425SPRO_3424SPRO_3426SPRO_3426SPRO_2166SPRO_2166
SMEL266834 SMA1741SMA1742SMA1745SMA1741SMA1741SMC01511SMA1745
SMED366394 SMED_2494SMED_2493SMED_2493SMED_2492SMED_2494SMED_2494SMED_4080SMED_4080
SHAE279808 SH2247SH2246SH2246SH2247SH2247SH0865SH2246
SGLO343509 SGP1_0035SGP1_0036SGP1_0036SGP1_0037SGP1_0035SGP1_0035SG1539
SERY405948 SACE_0413SACE_0412SACE_0411SACE_0413SACE_0413SACE_4374SACE_0411
SDYS300267 SDY_0167SDY_0169SDY_0520SDY_0521SDY_0519SDY_4293SDY_4294SDY_4295
SCO SCO1785SCO7398SCO1786SCO1787SCO1785SCO0495SCO0997SCO0997
SAVE227882 SAV6493SAV601SAV6492SAV6491SAV6493SAV6493SAV6492SAV6491
SAUR93062 SACOL0704SACOL2166SACOL0098SACOL0704SACOL0704SACOL2165SACOL0705
SAUR93061 SAOUHSC_00652SAOUHSC_02428SAOUHSC_00072SAOUHSC_00652SAOUHSC_00652SAOUHSC_02427SAOUHSC_00653
SAUR426430 NWMN_0616NWMN_2077NWMN_0058NWMN_0616NWMN_0616NWMN_2076NWMN_0617
SAUR418127 SAHV_0644SAHV_2160SAHV_0113SAHV_0644SAHV_0644SAHV_2159SAHV_0645
SAUR367830 SAUSA300_0633SAUSA300_2135SAUSA300_0116SAUSA300_0633SAUSA300_0633SAUSA300_2134SAUSA300_0634
SAUR359787 SAURJH1_0685SAURJH1_2245SAURJH1_0105SAURJH1_0685SAURJH1_0685SAURJH1_2244SAURJH1_0686
SAUR359786 SAURJH9_0670SAURJH9_2207SAURJH9_0101SAURJH9_0670SAURJH9_0670SAURJH9_2206SAURJH9_0671
SAUR282459 SAS0612SAS2077SAS0088SAS0612SAS0612SAS2076SAS0613
SAUR282458 SAR0657SAR0658SAR0117SAR0657SAR0657SAR2266SAR0658
SAUR273036 SAB0596SAB2057CSAB2056CSAB0053CSAB0596SAB0596SAB2056CSAB0597
SAUR196620 MW0609MW2102MW0087MW0609MW0609MW2101MW0610
SAUR158879 SA0602SA1978SA0110SA0602SA0602SA1977SA0603
SAUR158878 SAV0647SAV2176SAV0114SAV0647SAV0647SAV2175SAV0648
RXYL266117 RXYL_0416RXYL_0415RXYL_0415RXYL_0414RXYL_0416RXYL_0416RXYL_0415RXYL_0414
RSPH349102 RSPH17025_3334RSPH17025_3333RSPH17025_3332RSPH17025_3334RSPH17025_3334RSPH17025_1384RSPH17025_3332
RSPH349101 RSPH17029_0086RSPH17029_0087RSPH17029_3059RSPH17029_3060RSPH17029_3058RSPH17029_3058RSPH17029_3060RSPH17029_3060
RSPH272943 RSP_1437RSP_1438RSP_3414RSP_3415RSP_3413RSP_3413RSP_3415RSP_3415
RSAL288705 RSAL33209_2862RSAL33209_2062RSAL33209_3347RSAL33209_1683RSAL33209_2862RSAL33209_1681RSAL33209_1683
RETL347834 RHE_PE00282RHE_PF00465RHE_CH03270RHE_CH03270RHE_PE00282RHE_CH03270RHE_CH03270
PSYR205918 PSYR_2593PSYR_2592PSYR_2591PSYR_2593PSYR_0664PSYR_0665PSYR_0666
PPUT76869 PPUTGB1_1803PPUTGB1_1806PPUTGB1_1805PPUTGB1_1803PPUTGB1_1803PPUTGB1_1805PPUTGB1_4686
PMUL272843 PM0128PM0129PM0129PM0128PM0128PM0129PM0130
PMEN399739 PMEN_2860PMEN_3768PMEN_4564PMEN_4564PMEN_2860PMEN_2866PMEN_4564
PLUM243265 PLU4450PLU4448PLU4449PLU4624PLU4626PLU4450PLU4449PLU4448
PFLU220664 PFL_3622PFL_3625PFL_3624PFL_3622PFL_3622PFL_3624PFL_3624
PCRY335284 PCRYO_1285PCRYO_1284PCRYO_1284PCRYO_1285PCRYO_1285PCRYO_1284PCRYO_1283
PAER208964 PA4158PA4161PA4160PA4158PA4158PA4160PA4160
PAER208963 PA14_55040PA14_10140PA14_10160PA14_10180PA14_10180PA14_10160PA14_10160
OIHE221109 OB0262OB0452OB0261OB0260OB0262OB0450OB0453OB0452
OANT439375 OANT_3476OANT_2778OANT_4082OANT_2826OANT_4085OANT_4085OANT_2826OANT_2826
NSP103690 ALL0389ALL0387ALL2585ALL2586ALL2584ALL2584ALL2585ALL2586
NFAR247156 NFA25190NFA18240NFA25200NFA25210NFA25190NFA25190NFA18240NFA25210
MSP400668 MMWYL1_1010MMWYL1_1008MMWYL1_0465MMWYL1_3637MMWYL1_3639MMWYL1_0690MMWYL1_0691MMWYL1_0692
MSP266779 MESO_0135MESO_1443MESO_0134MESO_0136MESO_0136MESO_1443MESO_1443
MSME246196 MSMEG_0015MSMEG_0013MSMEG_0012MSMEG_0015MSMEG_0015MSMEG_6063MSMEG_6063
MAQU351348 MAQU_2188MAQU_2190MAQU_3298MAQU_3297MAQU_3299MAQU_3299MAQU_0275MAQU_3297
LSPH444177 BSPH_2323BSPH_1674BSPH_1674BSPH_0991BSPH_1675BSPH_1675BSPH_0992BSPH_0992
LPLA220668 LP_3104LP_3106LP_3105LP_3104LP_3104LP_3106LP_3106
LINN272626 LIN2074LIN2071LIN2524LIN2072LIN2074LIN2074LIN2524
KRAD266940 KRAD_1239KRAD_1240KRAD_1240KRAD_1241KRAD_1239KRAD_1239KRAD_1240KRAD_1241
KPNE272620 GKPORF_B4454GKPORF_B4457GKPORF_B5026GKPORF_B5027GKPORF_B5025GKPORF_B5025GKPORF_B2423GKPORF_B2423
HSP64091 VNG2558GVNG2560GVNG2560GVNG2558GVNG2558GVNG1370GVNG1370G
HSAL478009 OE4587ROE4591ROE4591ROE4587ROE4587ROE2952FOE2952F
HCHE349521 HCH_01396HCH_01394HCH_03793HCH_03792HCH_03795HCH_03795HCH_03457HCH_03456
HAUR316274 HAUR_1737HAUR_1736HAUR_1736HAUR_1735HAUR_1737HAUR_1737HAUR_1736HAUR_2100
GTHE420246 GTNG_0175GTNG_1319GTNG_1319GTNG_1318GTNG_1320GTNG_0175GTNG_1319GTNG_1318
GKAU235909 GK0194GK1460GK1460GK1459GK1461GK1461GK1460GK2900
ESP42895 ENT638_0691ENT638_0693ENT638_1121ENT638_1122ENT638_1120ENT638_1120ENT638_1738ENT638_3440
ECOO157 FHUCFHUBFEPGFEPDFEPCFEPCZ4384CHUU
ECOL83334 ECS0155ECS0157ECS0628ECS0629ECS0627ECS0627ECS3915ECS4386
ECOL585397 ECED1_0157ECED1_0159ECED1_0586ECED1_0587ECED1_0585ECED1_5151ECED1_5153ECED1_5154
ECOL585057 ECIAI39_0155ECIAI39_0157ECIAI39_0566ECIAI39_0567ECIAI39_0565ECIAI39_4765ECIAI39_4766ECIAI39_4767
ECOL585056 ECUMN_0148ECUMN_0150ECUMN_0683ECUMN_0684ECUMN_0682ECUMN_4855ECUMN_4857ECUMN_4858
ECOL585055 EC55989_0145EC55989_0147EC55989_0581EC55989_0582EC55989_0580EC55989_4959EC55989_4961EC55989_4962
ECOL585035 ECS88_0162ECS88_0164ECS88_0628ECS88_0629ECS88_0627ECS88_4860ECS88_4861ECS88_4862
ECOL481805 ECOLC_3508ECOLC_3506ECOLC_3055ECOLC_3054ECOLC_3056ECOLC_0739ECOLC_0740ECOLC_0741
ECOL469008 ECBD_3467ECBD_3465ECBD_3066ECBD_3065ECBD_3067ECBD_3751ECBD_3750ECBD_3749
ECOL439855 ECSMS35_0163ECSMS35_0165ECSMS35_0609ECSMS35_0610ECSMS35_0607ECSMS35_0607ECSMS35_3321ECSMS35_3808
ECOL413997 ECB_00150ECB_00152ECB_00556ECB_00557ECB_00555ECB_04153ECB_04154ECB_04155
ECOL405955 APECO1_1834APECO1_1832APECO1_1460APECO1_1459APECO1_1461APECO1_1461APECO1_3386APECO1_2943
ECOL364106 UTI89_C0167UTI89_C0169UTI89_C0591UTI89_C0592UTI89_C0590UTI89_C0590UTI89_C3461UTI89_C4037
ECOL362663 ECP_0161ECP_0163ECP_0621ECP_0622ECP_0620ECP_0620ECP_3119ECP_3604
ECOL331111 ECE24377A_0156ECE24377A_0158ECE24377A_0609ECE24377A_0610ECE24377A_0607ECE24377A_4864ECE24377A_4865ECE24377A_4866
ECOL316407 ECK0150:JW0147:B0151ECK0152:JW0149:B0153ECK0582:JW0581:B058ECK0583:JW0582:B0590ECK0581:JW0580:B0588ECK4277:JW4247:B4287ECK4278:JW4248:B4288ECK4279:JW4249:B4289
ECOL199310 C0186C0188C0676C0677C0675C0675C3773C4317
ECAR218491 ECA3312ECA3310ECA2807ECA2808ECA2806ECA1073ECA1074ECA1075
DRAD243230 DR_B0121DR_B0122DR_B0015DR_B0123DR_B0121DR_B0121DR_B0122DR_B0123
DHAF138119 DSY1005DSY3873DSY1004DSY1003DSY1005DSY3570DSY3571DSY2085
DGEO319795 DGEO_2759DGEO_2758DGEO_2756DGEO_2759DGEO_2759DGEO_2758DGEO_2756
CVIO243365 CV_2234CV_1794CV_2235CV_2236CV_2234CV_2234CV_1794CV_1558
CTET212717 CTC_01196CTC_01196CTC_01196CTC_01197CTC_01197CTC_01196CTC_01196
CSP501479 CSE45_0698CSE45_2871CSE45_0696CSE45_0698CSE45_0698CSE45_1083CSE45_2871
CSAL290398 CSAL_1051CSAL_1049CSAL_1041CSAL_1042CSAL_2702CSAL_2702CSAL_1041CSAL_1042
CPER289380 CPR_0797CPR_0796CPR_0796CPR_0795CPR_0797CPR_0797CPR_0796CPR_0213
CPER195103 CPF_0810CPF_0809CPF_0809CPF_0808CPF_0810CPF_0810CPF_0809CPF_0214
CPER195102 CPE0813CPE0812CPE0812CPE0811CPE0813CPE0813CPE0812
CNOV386415 NT01CX_1447NT01CX_1447NT01CX_1447NT01CX_1448NT01CX_1448NT01CX_1447NT01CX_1447
CMIC443906 CMM_2928CMM_0167CMM_2929CMM_2930CMM_2928CMM_2928CMM_2350CMM_2930
CMIC31964 CMS3063CMS0337CMS3064CMS3065CMS3063CMS3063CMS1571CMS3065
CJEI306537 JK1293JK1294JK1773JK1772JK1818JK1806JK1294JK1816
CGLU196627 CG0768CG0590CG0591CG0589CG0589CG0778CG0770
CEFF196164 CE0684CE0685CE0686CE0684CE0684CE0694CE0686
CDIF272563 CD2875CD2876CD2876CD2877CD2875CD2875CD2876
CBOT536232 CLM_0381CLM_0805CLM_0804CLM_0381CLM_0381CLM_0805CLM_0804
CBOT515621 CLJ_B0366CLJ_B0364CLJ_B0760CLJ_B0839CLJ_B0366CLJ_B0366CLJ_B0760CLJ_B0839
CBOT508765 CLL_A2113CLL_A2114CLL_A2114CLL_A2115CLL_A2113CLL_A2113CLL_A2114
CBOT498213 CLD_0440CLD_0442CLD_0078CLD_0079CLD_0440CLD_0440CLD_0078CLD_0078
CBOT441772 CLI_0383CLI_0381CLI_0757CLI_0756CLI_0383CLI_0383CLI_0757CLI_0756
CBOT441771 CLC_0371CLC_0369CLC_0742CLC_0741CLC_0371CLC_0371CLC_0742CLC_0741
CBOT441770 CLB_0356CLB_0354CLB_0727CLB_0726CLB_0356CLB_0356CLB_0727CLB_0726
CBOT36826 CBO0313CBO0311CBO0688CBO0687CBO0313CBO0313CBO0688CBO0687
CACE272562 CAC0791CAC0788CAC0789CAC0791CAC0791CAC0788CAC0789
BWEI315730 BCERKBAB4_5174BCERKBAB4_4357BCERKBAB4_0531BCERKBAB4_0530BCERKBAB4_0532BCERKBAB4_5174BCERKBAB4_5175BCERKBAB4_0530
BTHU412694 BALH_4877BALH_4114BALH_0555BALH_0554BALH_0556BALH_4877BALH_4879BALH_0554
BTHU281309 BT9727_5061BT9727_4265BT9727_0527BT9727_0526BT9727_0528BT9727_5061BT9727_5062BT9727_0526
BSUB BSU33290BSU33300BSU01610BSU08450BSU32940BSU33290BSU07500BSU07510
BPUM315750 BPUM_2990BPUM_2991BPUM_2909BPUM_2992BPUM_2949BPUM_2990BPUM_2991BPUM_2980
BLIC279010 BL00705BL00704BL01088BL02185BL02183BL00705BL01088BL01087
BHAL272558 BH1081BH1038BH3789BH3790BH1039BH1081BH1082BH1083
BCLA66692 ABC1084ABC3751ABC1083ABC1082ABC1084ABC1084ABC1083ABC3426
BCER572264 BCA_5531BCA_4636BCA_0651BCA_0650BCA_0652BCA_5531BCA_5532BCA_0650
BCER405917 BCE_5510BCE_0685BCE_0685BCE_0684BCE_0686BCE_5510BCE_5511BCE_0684
BCER315749 BCER98_3902BCER98_3903BCER98_3903BCER98_3904BCER98_3902BCER98_3902BCER98_3903BCER98_3904
BCER288681 BCE33L5078BCE33L0527BCE33L0527BCE33L0526BCE33L0528BCE33L5078BCE33L5079BCE33L0526
BCER226900 BC_5381BC_0618BC_0618BC_3468BC_0619BC_5381BC_5382BC_5383
BANT592021 BAA_5655BAA_4782BAA_0699BAA_0698BAA_0700BAA_5655BAA_5656BAA_0698
BANT568206 BAMEG_5673BAMEG_4801BAMEG_3970BAMEG_3971BAMEG_3969BAMEG_5673BAMEG_5674BAMEG_3971
BANT261594 GBAA5629GBAA4767GBAA0617GBAA0616GBAA0618GBAA5629GBAA5630GBAA0616
BANT260799 BAS5230BAS4425BAS0583BAS0582BAS0584BAS5230BAS5231BAS0582
BAMY326423 RBAM_030410RBAM_030420RBAM_030420RBAM_030430RBAM_030060RBAM_030410RBAM_030420RBAM_030430
BAMB398577 BAMMC406_1553BAMMC406_1554BAMMC406_1554BAMMC406_1553BAMMC406_1553BAMMC406_1554BAMMC406_2371
BAMB339670 BAMB_1532BAMB_1533BAMB_1695BAMB_1532BAMB_1532BAMB_1533BAMB_2503
AVAR240292 AVA_2830AVA_2828AVA_2828AVA_2830AVA_2830AVA_2828AVA_2828
ASP1667 ARTH_3932ARTH_3933ARTH_3934ARTH_3932ARTH_3932ARTH_3934ARTH_3934
AORE350688 CLOS_2428CLOS_0311CLOS_2429CLOS_2430CLOS_2428CLOS_2810CLOS_0319CLOS_0311
AMAR329726 AM1_3348AM1_A0162AM1_3414AM1_A0163AM1_A0161AM1_A0161AM1_A0162AM1_3350
ACAU438753 AZC_3237AZC_3249AZC_0185AZC_0184AZC_0183AZC_0183AZC_0184
AAUR290340 AAUR_0389AAUR_2017AAUR_0558AAUR_0559AAUR_0557AAUR_3763AAUR_3765AAUR_0387


Organism features enriched in list (features available for 134 out of the 142 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00366153192
Arrangment:Clusters 2.220e-71417
Arrangment:Pairs 1.028e-1053112
Disease:Anthrax 0.002695344
Disease:Botulism 0.000605255
Disease:Bubonic_plague 0.002820656
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.0000487911
Endospores:Yes 1.539e-163953
GC_Content_Range7:70-100 0.0005182811
Genome_Size_Range5:4-6 1.778e-767184
Genome_Size_Range5:6-10 0.00097512047
Genome_Size_Range9:3-4 0.00709032677
Genome_Size_Range9:4-5 0.00094043496
Genome_Size_Range9:5-6 0.00035773388
Genome_Size_Range9:6-8 0.00345291638
Gram_Stain:Gram_Neg 9.017e-655333
Gram_Stain:Gram_Pos 3.989e-1368150
Habitat:Aquatic 0.0003332991
Habitat:Host-associated 0.000483032206
Habitat:Multiple 3.340e-867178
Habitat:Terrestrial 0.00092591531
Motility:Yes 0.000092780267
Optimal_temp.:25-35 0.0008446914
Optimal_temp.:30-37 7.872e-71418
Oxygen_Req:Facultative 0.000010367201
Pathogenic_in:Human 0.000215166213
Shape:Rod 3.385e-7104347
Shape:Spiral 0.0011288134
Temp._range:Mesophilic 0.0002245122473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 335
Effective number of orgs (counting one per cluster within 468 clusters): 278

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-21
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB81
TSP28240 Thermotoga sp.1
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB81
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SPEA398579 ncbi Shewanella pealeana ATCC 7003451
SONE211586 ncbi Shewanella oneidensis MR-11
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SHAL458817 ncbi Shewanella halifaxensis HAW-EB41
SGOR29390 Streptococcus gordonii Challis0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEG203122 ncbi Saccharophagus degradans 2-400
SBAL402882 ncbi Shewanella baltica OS1851
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB1
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSOL267608 ncbi Ralstonia solanacearum GMI10000
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB51
RPAL316056 ncbi Rhodopseudomonas palustris BisB181
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RPAL258594 ncbi Rhodopseudomonas palustris CGA0091
RMAS416276 ncbi Rickettsia massiliae MTU50
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT264198 ncbi Ralstonia eutropha JMP1341
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSTU379731 ncbi Pseudomonas stutzeri A15011
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPUT351746 ncbi Pseudomonas putida F11
PPUT160488 ncbi Pseudomonas putida KT24401
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PFLU205922 ncbi Pseudomonas fluorescens Pf0-11
PENT384676 ncbi Pseudomonas entomophila L481
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE51
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM51
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16221
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE264732 ncbi Moorella thermoacetica ATCC 390731
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS101
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MKAN190192 ncbi Methanopyrus kandleri AV190
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP375286 ncbi Janthinobacterium sp. Marseille0
ILOI283942 ncbi Idiomarina loihiensis L2TR1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DRED349161 ncbi Desulfotomaculum reducens MI-10
DPSY177439 ncbi Desulfotalea psychrophila LSv541
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G201
DARO159087 ncbi Dechloromonas aromatica RCB1
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg1
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJAP155077 Cellvibrio japonicus1
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB150
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSP376 Bradyrhizobium sp.0
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BPER257313 ncbi Bordetella pertussis Tohama I1
BPAR257311 ncbi Bordetella parapertussis 128221
BLON206672 ncbi Bifidobacterium longum NCC27050
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1100
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB501
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAVE397945 ncbi Acidovorax citrulli AAC00-11
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  EG10304   EG10303   EG10298   EG10296   EG10295   EG10290   EG10289   EG10288   
ZMOB264203
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
WSUC273121
WPIP955
WPIP80849
VEIS391735 VEIS_3079
UURE95667
UURE95664
UPAR505682
TVOL273116
TTUR377629
TTHE300852 TTHB219
TSP28240 TRQ2_0758
TROS309801
TPET390874 TPET_0734
TPEN368408
TPAL243276
TMAR243274 TM_0190
TERY203124
TELO197221
TDEN326298
TDEN292415
TACI273075
SWOL335541
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391295 SSU05_0647
SSP84588
SSP64471
SSP387093
SSP1131
SSOL273057
SSED425104
SPEA398579 SPEA_3381
SONE211586 SO_3674
SMUT210007
SMAR399550
SHAL458817 SHAL_3459
SGOR29390
SELO269084
SDEG203122
SBAL402882 SHEW185_1016
SALA317655
SACI56780 SYN_01427
SACI330779
RTYP257363
RSOL267608
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057 RPD_2349
RPAL316056 RPC_4254
RPAL316055 RPE_3487
RPAL258594 RPA0150
RMAS416276
RFER338969
RFEL315456
REUT264198 REUT_A0655
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSTU379731 PST_3269
PSP312153
PSP117
PRUM264731
PPUT351746 PPUT_4552
PPUT160488 PP_4688
PPEN278197
PNAP365044
PMOB403833
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PGIN242619
PFUR186497 PF0910
PFLU205922 PFL_4799
PENT384676 PSEEN3068
PDIS435591
PATL342610
PAST100379
PARS340102
PARC259536
PAER178306
PABY272844 PAB0677
OTSU357244
OCAR504832 OCAR_4887
NWIN323098
NSP387092
NSP35761
NSEN222891
NPHA348780 NP3816A
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NEUT335283
NEUR228410
NARO279238
MXAN246197 MXAN_1320
MVAN350058
MTUB419947
MTUB336982
MTHE349307 MTHE_0443
MTHE264732 MOTH_1465
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP409
MSP189918
MSP164757
MSP164756
MSED399549
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221 MMAR10_2512
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MKAN190192
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MCAP243233
MBUR259564 MBUR_1546
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAER449447
MAEO419665
MACE188937 MA2149
MABS561007
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LMES203120
LLAC272623 L128386
LLAC272622 LACR_0373
LJOH257314
LINT363253
LINT267671
LINT189518
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCHO395495
LCAS321967
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
JSP375286
ILOI283942 IL0114
IHOS453591
HWAL362976
HSOM228400
HSOM205914
HPYL85963
HPYL357544
HPY
HNEP81032
HMOD498761
HINF71421
HINF281310
HHEP235279
HDUC233412
HBUT415426
HARS204773
HACI382638
GURA351605
GSUL243231
GOXY290633
GMET269799
GFOR411154
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FRANT
FPHI484022
FNUC190304
FNOD381764
FMAG334413
FJOH376686
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAN269484
DVUL882
DRED349161
DPSY177439 DP0215
DOLE96561
DNOD246195
DDES207559 DDE_3104
DARO159087 DARO_4031
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSP78
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809 CPHY_2393
CPEL335992
CMUR243161
CMET456442 MBOO_0986
CMAQ397948
CKOR374847
CKLU431943
CJEJ407148
CJEJ360109 JJD26997_0753
CJEJ354242
CJEJ195099
CJEJ192222
CJAP155077 CJA_3772
CHYD246194
CHUT269798 CHU_1389
CHOM360107
CFET360106
CFEL264202
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO291272
CBLO203907
CAULO
CABO218497
BTUR314724
BTHE226186
BSP376
BSP107806
BPER257313 BP0344
BPAR257311 BPP4188
BLON206672
BJAP224911
BHER314723
BGAR290434
BFRA295405
BFRA272559
BCIC186490
BBUR224326
BBRO257310 BB4658
BBAC264462
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AURANTIMONAS
ASP62977
ASP62928
ASP232721
APHA212042
APER272557
AMAR234826
ALAI441768
AFUL224325
AFER243159
ADEH290397
ACRY349163
ACEL351607
ABUT367737
ABAC204669
AAVE397945 AAVE_3323
AAEO224324


Organism features enriched in list (features available for 313 out of the 335 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 5.146e-63092
Arrangment:Filaments 0.0049695110
Arrangment:Pairs 4.276e-1031112
Disease:Pharyngitis 0.006619088
Disease:bronchitis_and_pneumonitis 0.006619088
Endospores:Yes 8.012e-9953
GC_Content_Range4:0-40 0.0006633132213
GC_Content_Range7:0-30 0.00722003347
GC_Content_Range7:50-60 0.004259046107
GC_Content_Range7:70-100 0.0024900111
Genome_Size_Range5:0-2 6.636e-20130155
Genome_Size_Range5:4-6 4.934e-869184
Genome_Size_Range5:6-10 1.928e-61047
Genome_Size_Range9:0-1 9.119e-62527
Genome_Size_Range9:1-2 4.213e-14105128
Genome_Size_Range9:4-5 0.00001623396
Genome_Size_Range9:5-6 0.00313713688
Genome_Size_Range9:6-8 0.0000186838
Gram_Stain:Gram_Neg 0.0001188200333
Gram_Stain:Gram_Pos 6.018e-1540150
Habitat:Aquatic 0.00347266091
Habitat:Host-associated 0.0068074123206
Habitat:Multiple 0.000269577178
Habitat:Terrestrial 0.0027480931
Motility:Yes 0.0016322127267
Optimal_temp.:35-37 0.00319121213
Oxygen_Req:Aerobic 0.0055089112185
Oxygen_Req:Anaerobic 0.000651169102
Oxygen_Req:Facultative 8.302e-1564201
Oxygen_Req:Microaerophilic 0.00659491518
Pathogenic_in:Human 1.847e-785213
Pathogenic_in:No 0.0004258140226
Shape:Coccus 0.00945253582
Shape:Rod 0.0000138162347
Shape:Sphere 0.00080781719
Shape:Spiral 0.00001043034
Temp._range:Hyperthermophilic 0.00894571823
Temp._range:Mesophilic 0.0005243239473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 16
Effective number of orgs (counting one per cluster within 468 clusters): 15

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CJEI306537 ncbi Corynebacterium jeikeium K411 0.00006486598
HSP64091 ncbi Halobacterium sp. NRC-1 0.00013234177
HSAL478009 ncbi Halobacterium salinarum R1 0.00018054367
CMIC31964 ncbi Clavibacter michiganensis sepedonicus 0.00055578618
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 382 0.00086689108
SSP1148 ncbi Synechocystis sp. PCC 6803 0.00126649548
TDEN243275 ncbi Treponema denticola ATCC 35405 0.00154785947
DRAD243230 ncbi Deinococcus radiodurans R1 0.002819210548
SAUR273036 ncbi Staphylococcus aureus RF122 0.003479610828
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 15305 0.004179711078
CPER289380 ncbi Clostridium perfringens SM101 0.004964711318
AORE350688 ncbi Alkaliphilus oremlandii OhILAs 0.005674911508
KRAD266940 ncbi Kineococcus radiotolerans SRS30216 0.006296811658
NFAR247156 ncbi Nocardia farcinica IFM 10152 0.007516811918
CPER195103 ncbi Clostridium perfringens ATCC 13124 0.008705912138
NSP103690 ncbi Nostoc sp. PCC 7120 0.008763612148


Names of the homologs of the genes in the group in each of these orgs
  EG10304   EG10303   EG10298   EG10296   EG10295   EG10290   EG10289   EG10288   
CJEI306537 JK1293JK1294JK1773JK1772JK1818JK1806JK1294JK1816
HSP64091 VNG2558GVNG2560GVNG2560GVNG2558GVNG2558GVNG1370GVNG1370G
HSAL478009 OE4587ROE4591ROE4591ROE4587ROE4587ROE2952FOE2952F
CMIC31964 CMS3063CMS0337CMS3064CMS3065CMS3063CMS3063CMS1571CMS3065
CMIC443906 CMM_2928CMM_0167CMM_2929CMM_2930CMM_2928CMM_2928CMM_2350CMM_2930
SSP1148 SLR1318SLR1316SLR1317SLR1316SLR1318SLR1318SLR1317SLR1316
TDEN243275 TDE_0625TDE_1179TDE_2357TDE_2357TDE_0625TDE_2357TDE_2357
DRAD243230 DR_B0121DR_B0122DR_B0015DR_B0123DR_B0121DR_B0121DR_B0122DR_B0123
SAUR273036 SAB0596SAB2057CSAB2056CSAB0053CSAB0596SAB0596SAB2056CSAB0597
SSAP342451 SSP2073SSP2072SSP2071SSP2072SSP2073SSP2073SSP0711SSP0710
CPER289380 CPR_0797CPR_0796CPR_0796CPR_0795CPR_0797CPR_0797CPR_0796CPR_0213
AORE350688 CLOS_2428CLOS_0311CLOS_2429CLOS_2430CLOS_2428CLOS_2810CLOS_0319CLOS_0311
KRAD266940 KRAD_1239KRAD_1240KRAD_1240KRAD_1241KRAD_1239KRAD_1239KRAD_1240KRAD_1241
NFAR247156 NFA25190NFA18240NFA25200NFA25210NFA25190NFA25190NFA18240NFA25210
CPER195103 CPF_0810CPF_0809CPF_0809CPF_0808CPF_0810CPF_0810CPF_0809CPF_0214
NSP103690 ALL0389ALL0387ALL2585ALL2586ALL2584ALL2584ALL2585ALL2586


Organism features enriched in list (features available for 16 out of the 16 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Gas_gangrene 0.002070823
GC_Content_Range7:70-100 0.0001088411
Genome_Size_Range5:2-4 0.000099213197
Genome_Size_Range9:3-4 0.0019396777
Gram_Stain:Gram_Neg 0.00002231333
Gram_Stain:Gram_Pos 0.000266711150
Optimal_temp.:25-28 0.000707322



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1314 (fructose degradation)2241100.4700
PWY-5022 (4-aminobutyrate degradation V)43370.4106
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))121700.4103



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10303   EG10298   EG10296   EG10295   EG10290   EG10289   EG10288   
EG103040.9996390.9994290.9994220.9997090.999710.9992360.998973
EG103030.9992780.999130.9994150.999410.9993430.998977
EG102980.9997860.9997860.9996850.9995010.999576
EG102960.9997480.9996450.9994330.999571
EG102950.9998450.9993160.999243
EG102900.9995370.999396
EG102890.999716
EG10288



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PAIRWISE BLAST SCORES:

  EG10304   EG10303   EG10298   EG10296   EG10295   EG10290   EG10289   EG10288   
EG103040.0f0---1.1e-512.4e-49--
EG10303-0.0f02.4e-37---2.1e-362.6e-34
EG10298--0.0f0-----
EG10296---0.0f0----
EG102952.7e-48---0.0f07.3e-55--
EG102905.8e-46---3.2e-540.0f0--
EG10289------0.0f0-
EG10288------2.0e-270.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-1981 (ferrichrome uptake system) (degree of match pw to cand: 0.286, degree of match cand to pw: 0.250, average score: 0.546)
  Genes in pathway or complex:
             0.4464 0.2289 EG10272 (exbD) EG10272-MONOMER (ExbD uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.3304 0.1053 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.5782 0.2515 EG11012 (tonB) EG11012-MONOMER (TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins)
             0.9782 0.9263 EG10302 (fhuA) EG10302-MONOMER (FhuA outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80)
   *in cand* 0.9995 0.9990 EG10304 (fhuC) FHUC-MONOMER (FhuC)
   *in cand* 0.9994 0.9990 EG10303 (fhuB) FHUB-MONOMER (FhuB)
             0.9891 0.9651 EG10305 (fhuD) FHUD-MONOMER (FhuD)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9990 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9995 0.9992 EG10289 (fecD) FECD-MONOMER (FecD)
   *in cand* 0.9997 0.9994 EG10290 (fecE) FECE-MONOMER (FecE)
   *in cand* 0.9996 0.9992 EG10295 (fepC) FEPC-MONOMER (FepC)
   *in cand* 0.9996 0.9991 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9996 0.9993 EG10298 (fepG) FEPG-MONOMER (FepG)

- ABC-11-CPLX (iron (III) hydroxamate ABC transporter) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.250, average score: 1.000)
  Genes in pathway or complex:
             0.9891 0.9651 EG10305 (fhuD) FHUD-MONOMER (FhuD)
   *in cand* 0.9994 0.9990 EG10303 (fhuB) FHUB-MONOMER (FhuB)
   *in cand* 0.9995 0.9990 EG10304 (fhuC) FHUC-MONOMER (FhuC)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9990 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9995 0.9992 EG10289 (fecD) FECD-MONOMER (FecD)
   *in cand* 0.9997 0.9994 EG10290 (fecE) FECE-MONOMER (FecE)
   *in cand* 0.9996 0.9992 EG10295 (fepC) FEPC-MONOMER (FepC)
   *in cand* 0.9996 0.9991 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9996 0.9993 EG10298 (fepG) FEPG-MONOMER (FepG)

- CPLX0-2001 (ferric dicitrate uptake system) (degree of match pw to cand: 0.375, degree of match cand to pw: 0.375, average score: 0.720)
  Genes in pathway or complex:
             0.9353 0.7384 EG10286 (fecA) EG10286-MONOMER (outer membrane receptor; citrate-dependent iron transport, outer membrane receptor)
             0.4464 0.2289 EG10272 (exbD) EG10272-MONOMER (ExbD uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.3304 0.1053 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.5782 0.2515 EG11012 (tonB) EG11012-MONOMER (TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins)
   *in cand* 0.9997 0.9994 EG10290 (fecE) FECE-MONOMER (FecE)
   *in cand* 0.9994 0.9990 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9995 0.9992 EG10289 (fecD) FECD-MONOMER (FecD)
             0.9989 0.9979 EG10287 (fecB) FECB-MONOMER (FecB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9992 EG10295 (fepC) FEPC-MONOMER (FepC)
   *in cand* 0.9996 0.9991 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9996 0.9993 EG10298 (fepG) FEPG-MONOMER (FepG)
   *in cand* 0.9994 0.9990 EG10303 (fhuB) FHUB-MONOMER (FhuB)
   *in cand* 0.9995 0.9990 EG10304 (fhuC) FHUC-MONOMER (FhuC)

- ABC-9-CPLX (iron dicitrate ABC transporter) (degree of match pw to cand: 0.750, degree of match cand to pw: 0.375, average score: 0.999)
  Genes in pathway or complex:
             0.9989 0.9979 EG10287 (fecB) FECB-MONOMER (FecB)
   *in cand* 0.9995 0.9992 EG10289 (fecD) FECD-MONOMER (FecD)
   *in cand* 0.9994 0.9990 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9997 0.9994 EG10290 (fecE) FECE-MONOMER (FecE)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9992 EG10295 (fepC) FEPC-MONOMER (FepC)
   *in cand* 0.9996 0.9991 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9996 0.9993 EG10298 (fepG) FEPG-MONOMER (FepG)
   *in cand* 0.9994 0.9990 EG10303 (fhuB) FHUB-MONOMER (FhuB)
   *in cand* 0.9995 0.9990 EG10304 (fhuC) FHUC-MONOMER (FhuC)

- CPLX0-1944 (Ferric Enterobactin Transport System) (degree of match pw to cand: 0.375, degree of match cand to pw: 0.375, average score: 0.650)
  Genes in pathway or complex:
             0.4464 0.2289 EG10272 (exbD) EG10272-MONOMER (ExbD uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.3304 0.1053 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.5782 0.2515 EG11012 (tonB) EG11012-MONOMER (TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins)
             0.9432 0.8354 EG10293 (fepA) EG10293-MONOMER (FepA, outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D)
   *in cand* 0.9996 0.9992 EG10295 (fepC) FEPC-MONOMER (FepC)
   *in cand* 0.9996 0.9991 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9996 0.9993 EG10298 (fepG) FEPG-MONOMER (FepG)
             0.9989 0.9975 EG10294 (fepB) FEPB-MONOMER (FepB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9990 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9995 0.9992 EG10289 (fecD) FECD-MONOMER (FecD)
   *in cand* 0.9997 0.9994 EG10290 (fecE) FECE-MONOMER (FecE)
   *in cand* 0.9994 0.9990 EG10303 (fhuB) FHUB-MONOMER (FhuB)
   *in cand* 0.9995 0.9990 EG10304 (fhuC) FHUC-MONOMER (FhuC)

- ABC-10-CPLX (ferric enterobactin ABC transporter) (degree of match pw to cand: 0.750, degree of match cand to pw: 0.375, average score: 1.000)
  Genes in pathway or complex:
             0.9989 0.9975 EG10294 (fepB) FEPB-MONOMER (FepB)
   *in cand* 0.9996 0.9993 EG10298 (fepG) FEPG-MONOMER (FepG)
   *in cand* 0.9996 0.9991 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9996 0.9992 EG10295 (fepC) FEPC-MONOMER (FepC)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9990 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9995 0.9992 EG10289 (fecD) FECD-MONOMER (FecD)
   *in cand* 0.9997 0.9994 EG10290 (fecE) FECE-MONOMER (FecE)
   *in cand* 0.9994 0.9990 EG10303 (fhuB) FHUB-MONOMER (FhuB)
   *in cand* 0.9995 0.9990 EG10304 (fhuC) FHUC-MONOMER (FhuC)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10303 EG10304 (centered at EG10303)
EG10288 EG10289 EG10290 (centered at EG10289)
EG10295 EG10296 EG10298 (centered at EG10298)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG10304   EG10303   EG10298   EG10296   EG10295   EG10290   EG10289   EG10288   
227/623201/623187/623213/623223/623227/623205/623237/623
AAUR290340:2:Tyes21590167168166330133030
AAVE397945:0:Tyes-------0
ABAU360910:0:Tyes0----0-484
ABOR393595:0:Tyes-0-----0
ACAU438753:0:Tyes309131032100-1
AEHR187272:0:Tyes-0-0--00
AHYD196024:0:Tyes21992201-2-0--
AMAR329726:8:Tyes-1-2001-
AMAR329726:9:Tyes0-66----2
AMET293826:0:Tyes0---00--
ANAE240017:0:Tyes1190-0118811903--
AORE350688:0:Tyes21850218621872185256680
APLE416269:0:Tyes02------
APLE434271:0:Tno02------
ASAL382245:5:Tyes24272429-200-1423
ASP1667:3:Tyes0-120022
ASP76114:2:Tyes-0-0--00
AVAR240292:3:Tyes200-2200
BABO262698:0:Tno-----0--
BABO262698:1:Tno---0--0-
BAMB339670:3:Tno01162-001994
BAMB398577:3:Tno011-001831
BAMY326423:0:Tyes353636370353637
BANT260799:0:Tno46603838102466046610
BANT261594:2:Tno46243813102462446250
BANT568206:2:Tyes1635799120163516362
BANT592021:2:Tno48544016102485448550
BBAC360095:0:Tyes---0--0-
BBRO257310:0:Tyes-------0
BCAN483179:1:Tno---0--0-
BCEN331271:2:Tno01--001693
BCEN331272:3:Tyes01--001818
BCER226900:1:Tyes46610027931466146624663
BCER288681:0:Tno45681102456845690
BCER315749:1:Tyes01120012
BCER405917:1:Tyes45751102457545760
BCER572264:1:Tno47733914102477347740
BCLA66692:0:Tyes22697102212374
BHAL272558:0:Tyes430277027711434445
BHEN283166:0:Tyes---0--0-
BLIC279010:0:Tyes23272328122832281232710
BMAL243160:1:Tno100-11-747
BMAL320388:1:Tno735734--735735-0
BMAL320389:1:Tyes01--00-1005
BMEL224914:1:Tno---0--0-
BMEL359391:1:Tno---0--0-
BOVI236:1:Tyes---0--0-
BPAR257311:0:Tno-------0
BPER257313:0:Tyes-------0
BPET94624:0:Tyes-0-----274
BPSE272560:1:Tyes10--11-959
BPSE320372:1:Tno01--00-1127
BPSE320373:1:Tno01--00-1174
BPUM315750:0:Tyes808108239808170
BQUI283165:0:Tyes---0--00
BSP36773:2:Tyes01--0011025
BSUB:0:Tyes33543355071833173354625626
BSUI204722:1:Tyes---0--0-
BSUI470137:1:Tno---0--0-
BTHA271848:1:Tno986985--986986-0
BTHU281309:1:Tno44983707102449844990
BTHU412694:1:Tno41583405102415841590
BTRI382640:1:Tyes---0--0-
BVIE269482:7:Tyes01--001950
BWEI315730:4:Tyes45773748102457745780
BXEN266265:1:Tyes013851385-138613861385-
CACE272562:1:Tyes30-13301
CBEI290402:0:Tyes1571-1572157315710--
CBOT36826:1:Tno2037437322374373
CBOT441770:0:Tyes2036136022361360
CBOT441771:0:Tno2036236122362361
CBOT441772:1:Tno2036136022361360
CBOT498213:1:Tno2035635522356356
CBOT508765:1:Tyes0112001-
CBOT515621:2:Tyes2038146022381460
CBOT536232:0:Tno0-40740600407406
CDES477974:0:Tyes--00--00
CDIF272563:1:Tyes0112001-
CDIP257309:0:Tyes1-4694704684680-
CEFF196164:0:Fyes0-1200102
CGLU196627:0:Tyes159-1200169161
CHUT269798:0:Tyes-0------
CJAP155077:0:Tyes-------0
CJEI306537:0:Tyes014914905365241534
CJEJ360109:0:Tyes0-------
CMET456442:0:Tyes-------0
CMIC31964:2:Tyes26020260326042602260211952604
CMIC443906:2:Tyes28200282128222820282022302822
CNOV386415:0:Tyes-0001100
CPER195102:1:Tyes2110221-
CPER195103:0:Tno5855845845835855855840
CPER289380:3:Tyes5715705705695715715700
CPHY357809:0:Tyes-0------
CSAL290398:0:Tyes108011691169101
CSP501479:8:Fyes2-21420223812142
CTET212717:0:Tyes-0001100
CVIO243365:0:Tyes6842386856866846842380
DARO159087:0:Tyes-------0
DDES207559:0:Tyes-------0
DETH243164:0:Tyes---0---0
DGEO319795:0:Tyes01-30013
DHAF138119:0:Tyes22906102260326041108
DPSY177439:2:Tyes-------0
DRAD243230:1:Tyes939409593939495
DSHI398580:5:Tyes---10--100
DSP216389:0:Tyes---0--00
DSP255470:0:Tno---0--00
ECAR218491:0:Tyes22572255174017411739012
ECOL199310:0:Tno0247147247047035074042
ECOL316407:0:Tno02433434432411841194120
ECOL331111:6:Tno02429430428450845094510
ECOL362663:0:Tno0245545645445429543437
ECOL364106:1:Tno0242142242042032873856
ECOL405955:2:Tyes0238338438238229643417
ECOL409438:6:Tyes02513514512512--
ECOL413997:0:Tno02408409407404340444045
ECOL439855:4:Tno0243143243043030533527
ECOL469008:0:Tno405403102682681680
ECOL481805:0:Tno27822780232823272329012
ECOL585034:0:Tno02416417415415--
ECOL585035:0:Tno02454455453452845294530
ECOL585055:0:Tno02431432430473747394740
ECOL585056:2:Tno02532533531469246944695
ECOL585057:0:Tno02405406404461646174618
ECOL585397:0:Tno02403404402483848404841
ECOL83334:0:Tno0248348448248238494331
ECOLI:0:Tno02446447445421242134214
ECOO157:0:Tno0248048147947938574349
EFAE226185:3:Tyes27172210-1-
EFER585054:1:Tyes022312231123132313--
ESP42895:1:Tyes0243143243043010622775
FALN326424:0:Tyes1102-0111021102-1
FSP106370:0:Tyes-0-----0
FSP1855:0:Tyes1-0285011--
GKAU235909:1:Tyes01309130913081310131013092768
GTHE420246:1:Tyes01130113011291131011301129
GVIO251221:0:Tyes--0---00
HAUR316274:2:Tyes2110221364
HCHE349521:0:Tyes20229222912293229319711970
HHAL349124:0:Tyes---0--575-
HINF374930:0:Tyes03------
HMAR272569:7:Tyes-00-11--
HMAR272569:8:Tyes------0-
HMUK485914:1:Tyes-11-00--
HSAL478009:4:Tyes962963963-96296200
HSP64091:2:Tno938939939-93893800
ILOI283942:0:Tyes---0----
JSP290400:1:Tyes-1102-12126
KPNE272620:2:Tyes19801983254125422540254000
KRAD266940:2:Fyes21102210
LINN272626:1:Tno30474133474-
LLAC272622:5:Tyes-0------
LLAC272623:0:Tyes-0------
LMON169963:0:Tno2-496022496-
LMON265669:0:Tyes2-409022409-
LPLA220668:0:Tyes0-210022
LSAK314315:0:Tyes02-1-021
LSPH444177:1:Tyes1281667667066866811
LWEL386043:0:Tyes2-393022393-
LXYL281090:0:Tyes011100--
MACE188937:0:Tyes---0----
MAQU351348:2:Tyes18861888298829872989298902987
MBUR259564:0:Tyes-------0
MGIL350054:3:Tyes---0---0
MJAN243232:2:Tyes-00-----
MLAB410358:0:Tyes-----85-0
MLOT266835:2:Tyes-000---0
MMAR394221:0:Tyes-0------
MSME246196:0:Tyes2-102259985998
MSP266779:3:Tyes-1132002213201320
MSP400668:0:Tyes542540032183220224225226
MSUC221988:0:Tyes02------
MTHE264732:0:Tyes-0------
MTHE349307:0:Tyes--0-----
MXAN246197:0:Tyes-------0
NFAR247156:2:Tyes70107027037017010703
NPHA348780:2:Tyes------0-
NSP103690:6:Tyes20221722182216221622172218
OANT439375:4:Tyes6950129848130113014848
OCAR504832:0:Tyes-0------
OIHE221109:0:Tyes2192102190193192
PABY272844:0:Tyes------0-
PACN267747:0:Tyes-344257344--00
PAER208963:0:Tyes3647-013311
PAER208964:0:Tno0-320022
PCAR338963:0:Tyes--00---0
PCRY335284:1:Tyes211-2210
PENT384676:0:Tyes-------0
PFLU205922:0:Tyes-------0
PFLU216595:1:Tyes02--0012
PFLU220664:0:Tyes0-320022
PFUR186497:0:Tyes-0------
PHAL326442:1:Tyes-0-----0
PHOR70601:0:Tyes--0---0-
PING357804:0:Tyes--0---0-
PLUM243265:0:Fyes201182184210
PMEN399739:0:Tyes0913172517250-61725
PMUL272843:1:Tyes011-0012
PPRO298386:1:Tyes---200--
PPRO298386:2:Tyes20-----540
PPUT160488:0:Tno-------0
PPUT351746:0:Tyes-------0
PPUT76869:0:Tno0-320022902
PSP296591:2:Tyes-11-0012
PSP56811:2:Tyes02------
PSTU379731:0:Tyes-------0
PSYR205918:0:Tyes1931-193019291931012
PSYR223283:2:Tyes0---0012
RCAS383372:0:Tyes--0---00
RDEN375451:4:Tyes--666----0
RETL347834:3:Tyes0----0--
RETL347834:4:Tyes-0------
RETL347834:5:Tyes--00--00
REUT264198:3:Tyes-------0
REUT381666:2:Tyes------00
RLEG216596:3:Tyes20------
RLEG216596:6:Tyes--645645--0645
RMET266264:1:Tyes--0-----
RMET266264:2:Tyes------00
RPAL258594:0:Tyes-------0
RPAL316055:0:Tyes-------0
RPAL316056:0:Tyes---0----
RPAL316057:0:Tyes------0-
RRUB269796:1:Tyes------00
RSAL288705:0:Tyes11813811666211810-2
RSP101510:3:Fyes1025-1026102710251025-0
RSP357808:0:Tyes--0---00
RSPH272943:3:Tyes--120022
RSPH272943:4:Tyes01------
RSPH349101:1:Tno--120022
RSPH349101:2:Tno01------
RSPH349102:4:Tyes2-1022-0
RSPH349102:5:Tyes------0-
RXYL266117:0:Tyes21102210
SACI56780:0:Tyes-0------
SAGA205921:0:Tno0---00--
SAGA208435:0:Tno0---00--
SAGA211110:0:Tyes0---00--
SARE391037:0:Tyes2-1022-1716
SAUR158878:1:Tno5502135-05505502134551
SAUR158879:1:Tno5252015-05255252014526
SAUR196620:0:Tno5422093-05425422092543
SAUR273036:0:Tno5312004200305315312003532
SAUR282458:0:Tno538539-05385382133539
SAUR282459:0:Tno5492067-05495492066550
SAUR359786:1:Tno5852158-05855852157586
SAUR359787:1:Tno5752106-05755752105576
SAUR367830:3:Tno5031938-05035031937504
SAUR418127:0:Tyes5482123-05485482122549
SAUR426430:0:Tno5742090-05745742089575
SAUR93061:0:Fno5472285-05475472284548
SAUR93062:1:Tno5932019-05935932018594
SAVE227882:1:Fyes59680596759665968596859675966
SBAL399599:3:Tyes------00
SBAL402882:1:Tno------0-
SBOY300268:1:Tyes02290291289289--
SCO:2:Fyes129569441296129712950496496
SDEN318161:0:Tyes-340340----0
SDYS300267:1:Tyes02333334332386738683869
SENT209261:0:Tno021975197419761976--
SENT220341:0:Tno02368369367367--
SENT295319:0:Tno021862186118631863--
SENT321314:2:Tno02438439437437--
SENT454169:2:Tno02462463461461--
SEPI176279:1:Tyes0---0014391440
SEPI176280:0:Tno0---0014021403
SERY405948:0:Tyes2-102239140
SFLE198214:0:Tyes02357358356356--
SFLE373384:0:Tno02379380378378--
SFUM335543:0:Tyes------16220
SGLO343509:2:Tyes011200--
SGLO343509:3:Tyes-------0
SHAE279808:0:Tyes14301429-14291430143001429
SHAL458817:0:Tyes-0------
SHIGELLA:0:Tno02346347345345--
SLAC55218:1:Fyes2-1022-0
SLOI323850:0:Tyes01------
SMED366394:2:Tyes------00
SMED366394:3:Tyes211022--
SMEL266834:0:Tyes0-1200-2
SMEL266834:2:Tyes------0-
SONE211586:1:Tyes------0-
SPEA398579:0:Tno-0------
SPNE1313:0:Tyes2--022--
SPNE170187:0:Tyes3--033--
SPNE171101:0:Tno3--033--
SPNE487213:0:Tno2--022--
SPNE487214:0:Tno2--022--
SPNE488221:0:Tno2--022--
SPRO399741:1:Tyes18351833127612751277127700
SPYO160490:0:Tno0---00-1117
SPYO186103:0:Tno0---00-1200
SPYO193567:0:Tno1284---12841284-0
SPYO198466:0:Tno0---00-1276
SPYO286636:0:Tno0---00-1187
SPYO293653:0:Tno0---00-1209
SPYO319701:0:Tyes0---00-1210
SPYO370551:0:Tno0---00-1221
SPYO370552:0:Tno0---00-1290
SPYO370553:0:Tno0---00-1227
SPYO370554:0:Tyes0---00-1282
SRUB309807:1:Tyes--14741474--01474
SSAP342451:2:Tyes14121411141014111412141210
SSON300269:1:Tyes02358359357407040714072
SSP1148:0:Tyes20102210
SSP292414:2:Tyes--0----2632
SSP321327:0:Tyes--1-0011
SSP321332:0:Tyes--1-0011
SSP644076:3:Fyes124-1012412400
SSP94122:1:Tyes40-----0-
SSUI391295:0:Tyes---0----
SSUI391296:0:Tyes3--0-3--
STHE292459:0:Tyes0-120022
STRO369723:0:Tyes910-9099089100-2
STYP99287:1:Tyes02396397395395--
TCRU317025:0:Tyes--0----0
TDEN243275:0:Tyes0548171817180-17181718
TFUS269800:0:Tyes0-12002075-
TKOD69014:0:Tyes-00---0-
TLET416591:0:Tyes-11-001-
TMAR243274:0:Tyes--0-----
TPET390874:0:Tno--0-----
TPSE340099:0:Tyes--01224----
TSP1755:0:Tyes--0780----
TSP28240:0:Tyes--0-----
TTEN273068:0:Tyes-143014300----
TTHE262724:0:Tyes------00
TTHE300852:1:Tyes-------0
TWHI203267:0:Tyes--1200--
TWHI218496:0:Tno--1200--
UMET351160:0:Tyes-0-0--00
VCHO:0:Tyes02615614616616--
VCHO345073:1:Tno219922011022--
VEIS391735:1:Tyes-------0
VFIS312309:1:Tyes02--00814-
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