CANDIDATE ID: 236

CANDIDATE ID: 236

NUMBER OF GENES: 8
AVERAGE SCORE:    9.9943696e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    5.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG10304 (fhuC) (b0151)
   Products of gene:
     - FHUC-MONOMER (FhuC)
     - ABC-11-CPLX (iron (III) hydroxamate ABC transporter)
       Reactions:
        ATP + iron (III) hydroxamate complex[periplasmic space] + H2O  ->  ADP + phosphate + iron (III) hydroxamate complex[cytosol]
     - CPLX0-1981 (ferrichrome uptake system)
       Reactions:
        iron (III) hydroxamate complex[extracellular space]  ->  iron (III) hydroxamate complex[cytosol]

- EG10298 (fepG) (b0589)
   Products of gene:
     - FEPG-MONOMER (FepG)
     - ABC-10-CPLX (ferric enterobactin ABC transporter)
       Reactions:
        ATP + ferric enterobactin[periplasmic space] + H2O  ->  ADP + phosphate + ferric enterobactin[cytosol]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]

- EG10296 (fepD) (b0590)
   Products of gene:
     - FEPD-MONOMER (FepD)
     - ABC-10-CPLX (ferric enterobactin ABC transporter)
       Reactions:
        ATP + ferric enterobactin[periplasmic space] + H2O  ->  ADP + phosphate + ferric enterobactin[cytosol]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]

- EG10295 (fepC) (b0588)
   Products of gene:
     - FEPC-MONOMER (FepC)
     - ABC-10-CPLX (ferric enterobactin ABC transporter)
       Reactions:
        ATP + ferric enterobactin[periplasmic space] + H2O  ->  ADP + phosphate + ferric enterobactin[cytosol]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]

- EG10294 (fepB) (b0592)
   Products of gene:
     - FEPB-MONOMER (FepB)
     - ABC-10-CPLX (ferric enterobactin ABC transporter)
       Reactions:
        ATP + ferric enterobactin[periplasmic space] + H2O  ->  ADP + phosphate + ferric enterobactin[cytosol]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]

- EG10290 (fecE) (b4287)
   Products of gene:
     - FECE-MONOMER (FecE)
     - ABC-9-CPLX (iron dicitrate ABC transporter)
       Reactions:
        ATP + ferric dicitrate[periplasmic space] + H2O  ->  ADP + phosphate + ferric dicitrate[cytosol]
     - CPLX0-2001 (ferric dicitrate uptake system)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[cytosol]

- EG10289 (fecD) (b4288)
   Products of gene:
     - FECD-MONOMER (FecD)
     - ABC-9-CPLX (iron dicitrate ABC transporter)
       Reactions:
        ATP + ferric dicitrate[periplasmic space] + H2O  ->  ADP + phosphate + ferric dicitrate[cytosol]
     - CPLX0-2001 (ferric dicitrate uptake system)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[cytosol]

- EG10288 (fecC) (b4289)
   Products of gene:
     - FECC-MONOMER (FecC)
     - ABC-9-CPLX (iron dicitrate ABC transporter)
       Reactions:
        ATP + ferric dicitrate[periplasmic space] + H2O  ->  ADP + phosphate + ferric dicitrate[cytosol]
     - CPLX0-2001 (ferric dicitrate uptake system)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[cytosol]



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ORGANISMS CONTAINING AT LEAST 7 GENES FROM THE GROUP:

Total number of orgs: 131
Effective number of orgs (counting one per cluster within 468 clusters): 83

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317587
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329537
YPES377628 ncbi Yersinia pestis Nepal5167
YPES360102 ncbi Yersinia pestis Antiqua7
YPES349746 ncbi Yersinia pestis Angola7
YPES214092 ncbi Yersinia pestis CO927
YPES187410 ncbi Yersinia pestis KIM 107
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80818
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106337
STRO369723 ncbi Salinispora tropica CNB-4407
STHE292459 ncbi Symbiobacterium thermophilum IAM 148637
SSP644076 Silicibacter sp. TrichCH4B8
SSP1148 ncbi Synechocystis sp. PCC 68038
SSON300269 ncbi Shigella sonnei Ss0468
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153057
SPRO399741 ncbi Serratia proteamaculans 5688
SMEL266834 ncbi Sinorhizobium meliloti 10217
SMED366394 ncbi Sinorhizobium medicae WSM4198
SLAC55218 Ruegeria lacuscaerulensis7
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14357
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23388
SDYS300267 ncbi Shigella dysenteriae Sd1978
SCO ncbi Streptomyces coelicolor A3(2)8
SAVE227882 ncbi Streptomyces avermitilis MA-46807
SAUR93062 ncbi Staphylococcus aureus aureus COL7
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83257
SAUR426430 ncbi Staphylococcus aureus aureus Newman7
SAUR418127 ncbi Staphylococcus aureus aureus Mu37
SAUR367830 Staphylococcus aureus aureus USA3007
SAUR359787 ncbi Staphylococcus aureus aureus JH17
SAUR359786 ncbi Staphylococcus aureus aureus JH97
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4767
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2527
SAUR273036 ncbi Staphylococcus aureus RF1228
SAUR196620 ncbi Staphylococcus aureus aureus MW27
SAUR158879 ncbi Staphylococcus aureus aureus N3157
SAUR158878 ncbi Staphylococcus aureus aureus Mu507
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99418
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170257
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170297
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.17
RSP101510 ncbi Rhodococcus jostii RHA17
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332097
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a8
PPUT76869 ncbi Pseudomonas putida GB-18
PMUL272843 ncbi Pasteurella multocida multocida Pm707
PMEN399739 ncbi Pseudomonas mendocina ymp7
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO18
PFLU220664 ncbi Pseudomonas fluorescens Pf-58
PAER208964 ncbi Pseudomonas aeruginosa PAO18
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA148
OIHE221109 ncbi Oceanobacillus iheyensis HTE8318
OANT439375 ncbi Ochrobactrum anthropi ATCC 491888
NSP103690 ncbi Nostoc sp. PCC 71208
NFAR247156 ncbi Nocardia farcinica IFM 101527
MSP400668 ncbi Marinomonas sp. MWYL18
MSP266779 ncbi Chelativorans sp. BNC17
MSME246196 ncbi Mycobacterium smegmatis MC2 1557
MAQU351348 ncbi Marinobacter aquaeolei VT88
LSPH444177 ncbi Lysinibacillus sphaericus C3-418
LPLA220668 ncbi Lactobacillus plantarum WCFS18
KRAD266940 ncbi Kineococcus radiotolerans SRS302168
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785788
HCHE349521 ncbi Hahella chejuensis KCTC 23968
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237797
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-28
GKAU235909 ncbi Geobacillus kaustophilus HTA4268
ESP42895 Enterobacter sp.8
ECOO157 ncbi Escherichia coli O157:H7 EDL9338
ECOL83334 Escherichia coli O157:H78
ECOL585397 ncbi Escherichia coli ED1a8
ECOL585057 ncbi Escherichia coli IAI398
ECOL585056 ncbi Escherichia coli UMN0268
ECOL585055 ncbi Escherichia coli 559898
ECOL585035 ncbi Escherichia coli S888
ECOL481805 ncbi Escherichia coli ATCC 87398
ECOL469008 ncbi Escherichia coli BL21(DE3)8
ECOL439855 ncbi Escherichia coli SMS-3-58
ECOL413997 ncbi Escherichia coli B str. REL6068
ECOL405955 ncbi Escherichia coli APEC O18
ECOL364106 ncbi Escherichia coli UTI898
ECOL362663 ncbi Escherichia coli 5368
ECOL331111 ncbi Escherichia coli E24377A8
ECOL316407 ncbi Escherichia coli K-12 substr. W31108
ECOL199310 ncbi Escherichia coli CFT0738
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10438
DRAD243230 ncbi Deinococcus radiodurans R18
DHAF138119 ncbi Desulfitobacterium hafniense Y518
DGEO319795 ncbi Deinococcus geothermalis DSM 113007
CVIO243365 ncbi Chromobacterium violaceum ATCC 124728
CSP501479 Citreicella sp. SE457
CSAL290398 ncbi Chromohalobacter salexigens DSM 30437
CPER289380 ncbi Clostridium perfringens SM1018
CPER195103 ncbi Clostridium perfringens ATCC 131247
CPER195102 ncbi Clostridium perfringens 137
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3828
CMIC31964 ncbi Clavibacter michiganensis sepedonicus8
CJEI306537 ncbi Corynebacterium jeikeium K4118
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130328
CEFF196164 ncbi Corynebacterium efficiens YS-3148
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131297
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto8
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6578
CBOT498213 ncbi Clostridium botulinum B1 str. Okra8
CBOT441772 ncbi Clostridium botulinum F str. Langeland8
CBOT441771 ncbi Clostridium botulinum A str. Hall8
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193978
CBOT36826 Clostridium botulinum A8
BWEI315730 ncbi Bacillus weihenstephanensis KBAB48
BTHU412694 ncbi Bacillus thuringiensis Al Hakam8
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-278
BSUB ncbi Bacillus subtilis subtilis 1688
BPUM315750 ncbi Bacillus pumilus SAFR-0328
BLIC279010 ncbi Bacillus licheniformis ATCC 145808
BHAL272558 ncbi Bacillus halodurans C-1258
BCLA66692 ncbi Bacillus clausii KSM-K168
BCER572264 ncbi Bacillus cereus 03BB1028
BCER405917 Bacillus cereus W8
BCER315749 ncbi Bacillus cytotoxicus NVH 391-988
BCER288681 ncbi Bacillus cereus E33L8
BCER226900 ncbi Bacillus cereus ATCC 145798
BANT592021 ncbi Bacillus anthracis A02488
BANT568206 ncbi Bacillus anthracis CDC 6848
BANT261594 ncbi Bacillus anthracis Ames Ancestor8
BANT260799 ncbi Bacillus anthracis Sterne8
BAMY326423 ncbi Bacillus amyloliquefaciens FZB428
ASP1667 Arthrobacter sp.8
AORE350688 ncbi Alkaliphilus oremlandii OhILAs7
AMAR329726 ncbi Acaryochloris marina MBIC110178
ACAU438753 ncbi Azorhizobium caulinodans ORS 5717
AAUR290340 ncbi Arthrobacter aurescens TC18


Names of the homologs of the genes in the group in each of these orgs
  EG10304   EG10298   EG10296   EG10295   EG10294   EG10290   EG10289   EG10288   
YPSE349747 YPSIP31758_3333YPSIP31758_2442YPSIP31758_2444YPSIP31758_0617YPSIP31758_2444YPSIP31758_3804YPSIP31758_3804
YPSE273123 YPTB0739YPTB1547YPTB1545YPTB3360YPTB1545YPTB0337YPTB0337
YPES377628 YPN_0698YPN_2445YPN_2447YPN_0558YPN_2447YPN_3387YPN_3387
YPES360102 YPA_2892YPA_0829YPA_0827YPA_3092YPA_0827YPA_4002YPA_4002
YPES349746 YPANGOLA_A0998YPANGOLA_A3184YPANGOLA_A3186YPANGOLA_A0249YPANGOLA_A3186YPANGOLA_A0647YPANGOLA_A0647
YPES214092 YPO3392YPO1535YPO1533YPO0701YPO1533YPO0280YPO0280
YPES187410 Y0796Y2635Y2637Y3477Y2637Y0540Y0540
YENT393305 YE0730YE3620YE3619YE3621YE3618YE3621YE0328YE0328
VPAR223926 VPA1436VPA1653VPA1652VPA1655VPA1652VPA1653VPA1654
STRO369723 STROP_2555STROP_2554STROP_2553STROP_2555STROP_1631STROP_1628STROP_1630
STHE292459 STH1283STH1284STH1285STH1283STH1283STH1285STH1285
SSP644076 SCH4B_3664SCH4B_3539SCH4B_3538SCH4B_3664SCH4B_3667SCH4B_3664SCH4B_3538SCH4B_3538
SSP1148 SLR1318SLR1317SLR1316SLR1318SLR1319SLR1318SLR1317SLR1316
SSON300269 SSO_0163SSO_0540SSO_0541SSO_0539SSO_0543SSO_4459SSO_4460SSO_4461
SSAP342451 SSP2073SSP2071SSP2072SSP2073SSP2073SSP0711SSP0710
SPRO399741 SPRO_3978SPRO_3425SPRO_3424SPRO_3426SPRO_3422SPRO_3426SPRO_2166SPRO_2166
SMEL266834 SMA1741SMA1742SMA1745SMA1741SMA1741SMC01511SMA1745
SMED366394 SMED_2494SMED_2493SMED_2492SMED_2494SMED_2491SMED_2494SMED_4080SMED_4080
SLAC55218 SL1157_0504SL1157_0503SL1157_0502SL1157_0504SL1157_0501SL1157_0504SL1157_0502
SHAE279808 SH2247SH2246SH2247SH0768SH2247SH0865SH2246
SERY405948 SACE_0413SACE_0412SACE_0411SACE_0413SACE_5666SACE_0413SACE_4374SACE_0411
SDYS300267 SDY_0167SDY_0520SDY_0521SDY_0519SDY_0523SDY_4293SDY_4294SDY_4295
SCO SCO1785SCO1786SCO1787SCO1785SCO0494SCO0495SCO0997SCO0997
SAVE227882 SAV6493SAV6492SAV6491SAV6493SAV6493SAV6492SAV6491
SAUR93062 SACOL0704SACOL0098SACOL0704SACOL0099SACOL0704SACOL2165SACOL0705
SAUR93061 SAOUHSC_00652SAOUHSC_00072SAOUHSC_00652SAOUHSC_00074SAOUHSC_00652SAOUHSC_02427SAOUHSC_00653
SAUR426430 NWMN_0616NWMN_0058NWMN_0616NWMN_0059NWMN_0616NWMN_2076NWMN_0617
SAUR418127 SAHV_0644SAHV_0113SAHV_0644SAHV_0114SAHV_0644SAHV_2159SAHV_0645
SAUR367830 SAUSA300_0633SAUSA300_0116SAUSA300_0633SAUSA300_0117SAUSA300_0633SAUSA300_2134SAUSA300_0634
SAUR359787 SAURJH1_0685SAURJH1_0105SAURJH1_0685SAURJH1_0106SAURJH1_0685SAURJH1_2244SAURJH1_0686
SAUR359786 SAURJH9_0670SAURJH9_0101SAURJH9_0670SAURJH9_0102SAURJH9_0670SAURJH9_2206SAURJH9_0671
SAUR282459 SAS0612SAS0088SAS0612SAS0089SAS0612SAS2076SAS0613
SAUR282458 SAR0657SAR0117SAR0657SAR0118SAR0657SAR2266SAR0658
SAUR273036 SAB0596SAB2056CSAB0053CSAB0596SAB0054CSAB0596SAB2056CSAB0597
SAUR196620 MW0609MW0087MW0609MW0088MW0609MW2101MW0610
SAUR158879 SA0602SA0110SA0602SA0111SA0602SA1977SA0603
SAUR158878 SAV0647SAV0114SAV0647SAV0115SAV0647SAV2175SAV0648
RXYL266117 RXYL_0416RXYL_0415RXYL_0414RXYL_0416RXYL_0413RXYL_0416RXYL_0415RXYL_0414
RSPH349102 RSPH17025_3334RSPH17025_3333RSPH17025_3332RSPH17025_3334RSPH17025_3334RSPH17025_1384RSPH17025_3332
RSPH349101 RSPH17029_0086RSPH17029_3059RSPH17029_3060RSPH17029_3058RSPH17029_3058RSPH17029_3060RSPH17029_3060
RSPH272943 RSP_1437RSP_3414RSP_3415RSP_3413RSP_3413RSP_3415RSP_3415
RSP101510 RHA1_RO07251RHA1_RO07252RHA1_RO07253RHA1_RO07251RHA1_RO04195RHA1_RO07251RHA1_RO06224
RSAL288705 RSAL33209_2862RSAL33209_3347RSAL33209_1683RSAL33209_2862RSAL33209_3351RSAL33209_1681RSAL33209_1683
PSYR205918 PSYR_2593PSYR_2592PSYR_2591PSYR_2593PSYR_0667PSYR_0664PSYR_0665PSYR_0666
PPUT76869 PPUTGB1_1803PPUTGB1_1806PPUTGB1_1805PPUTGB1_1803PPUTGB1_1804PPUTGB1_1803PPUTGB1_1805PPUTGB1_4686
PMUL272843 PM0128PM0129PM0128PM0131PM0128PM0129PM0130
PMEN399739 PMEN_2860PMEN_4564PMEN_4564PMEN_2860PMEN_2865PMEN_2866PMEN_4564
PLUM243265 PLU4450PLU4449PLU4624PLU4626PLU4447PLU4450PLU4449PLU4448
PFLU220664 PFL_3622PFL_3625PFL_3624PFL_3622PFL_3623PFL_3622PFL_3624PFL_3624
PAER208964 PA4158PA4161PA4160PA4158PA4159PA4158PA4160PA4160
PAER208963 PA14_55040PA14_10140PA14_10160PA14_10180PA14_10170PA14_10180PA14_10160PA14_10160
OIHE221109 OB0262OB0261OB0260OB0262OB0259OB0450OB0453OB0452
OANT439375 OANT_3476OANT_4082OANT_2826OANT_4085OANT_4084OANT_4085OANT_2826OANT_2826
NSP103690 ALL0389ALL2585ALL2586ALL2584ALR2583ALL2584ALL2585ALL2586
NFAR247156 NFA25190NFA25200NFA25210NFA25190NFA25190NFA18240NFA25210
MSP400668 MMWYL1_1010MMWYL1_0465MMWYL1_3637MMWYL1_3639MMWYL1_0463MMWYL1_0690MMWYL1_0691MMWYL1_0692
MSP266779 MESO_1443MESO_0134MESO_0136MESO_0133MESO_0136MESO_1443MESO_1443
MSME246196 MSMEG_0015MSMEG_0013MSMEG_0012MSMEG_0015MSMEG_0015MSMEG_6063MSMEG_6063
MAQU351348 MAQU_2188MAQU_3298MAQU_3297MAQU_3299MAQU_2189MAQU_3299MAQU_0275MAQU_3297
LSPH444177 BSPH_2323BSPH_1674BSPH_0991BSPH_1675BSPH_0708BSPH_1675BSPH_0992BSPH_0992
LPLA220668 LP_3104LP_3106LP_3105LP_3104LP_3103LP_3104LP_3106LP_3106
KRAD266940 KRAD_1239KRAD_1240KRAD_1241KRAD_1239KRAD_3654KRAD_1239KRAD_1240KRAD_1241
KPNE272620 GKPORF_B4454GKPORF_B5026GKPORF_B5027GKPORF_B5025GKPORF_B5029GKPORF_B5025GKPORF_B2423GKPORF_B2423
HCHE349521 HCH_01396HCH_03793HCH_03792HCH_03795HCH_03790HCH_03795HCH_03457HCH_03456
HAUR316274 HAUR_1737HAUR_1736HAUR_1735HAUR_1737HAUR_1737HAUR_1736HAUR_2100
GTHE420246 GTNG_0175GTNG_1319GTNG_1318GTNG_1320GTNG_1317GTNG_0175GTNG_1319GTNG_1318
GKAU235909 GK0194GK1460GK1459GK1461GK2901GK1461GK1460GK2900
ESP42895 ENT638_0691ENT638_1121ENT638_1122ENT638_1120ENT638_1124ENT638_1120ENT638_1738ENT638_3440
ECOO157 FHUCFEPGFEPDFEPCFEPBFEPCZ4384CHUU
ECOL83334 ECS0155ECS0628ECS0629ECS0627ECS0631ECS0627ECS3915ECS4386
ECOL585397 ECED1_0157ECED1_0586ECED1_0587ECED1_0585ECED1_0589ECED1_5151ECED1_5153ECED1_5154
ECOL585057 ECIAI39_0155ECIAI39_0566ECIAI39_0567ECIAI39_0565ECIAI39_0569ECIAI39_4765ECIAI39_4766ECIAI39_4767
ECOL585056 ECUMN_0148ECUMN_0683ECUMN_0684ECUMN_0682ECUMN_0686ECUMN_4855ECUMN_4857ECUMN_4858
ECOL585055 EC55989_0145EC55989_0581EC55989_0582EC55989_0580EC55989_0584EC55989_4959EC55989_4961EC55989_4962
ECOL585035 ECS88_0162ECS88_0628ECS88_0629ECS88_0627ECS88_0631ECS88_4860ECS88_4861ECS88_4862
ECOL481805 ECOLC_3508ECOLC_3055ECOLC_3054ECOLC_3056ECOLC_3052ECOLC_0739ECOLC_0740ECOLC_0741
ECOL469008 ECBD_3467ECBD_3066ECBD_3065ECBD_3067ECBD_3063ECBD_3751ECBD_3750ECBD_3749
ECOL439855 ECSMS35_0163ECSMS35_0609ECSMS35_0610ECSMS35_0607ECSMS35_0612ECSMS35_0607ECSMS35_3321ECSMS35_3808
ECOL413997 ECB_00150ECB_00556ECB_00557ECB_00555ECB_00559ECB_04153ECB_04154ECB_04155
ECOL405955 APECO1_1834APECO1_1460APECO1_1459APECO1_1461APECO1_1457APECO1_1461APECO1_3386APECO1_2943
ECOL364106 UTI89_C0167UTI89_C0591UTI89_C0592UTI89_C0590UTI89_C0594UTI89_C0590UTI89_C3461UTI89_C4037
ECOL362663 ECP_0161ECP_0621ECP_0622ECP_0620ECP_0624ECP_0620ECP_3119ECP_3604
ECOL331111 ECE24377A_0156ECE24377A_0609ECE24377A_0610ECE24377A_0607ECE24377A_0612ECE24377A_4864ECE24377A_4865ECE24377A_4866
ECOL316407 ECK0150:JW0147:B0151ECK0582:JW0581:B058ECK0583:JW0582:B0590ECK0581:JW0580:B0588ECK0585:JW0584:B0592ECK4277:JW4247:B4287ECK4278:JW4248:B4288ECK4279:JW4249:B4289
ECOL199310 C0186C0676C0677C0675C0679C0675C3773C4317
ECAR218491 ECA3312ECA2807ECA2808ECA2806ECA1076ECA1073ECA1074ECA1075
DRAD243230 DR_B0121DR_B0015DR_B0123DR_B0121DR_2588DR_B0121DR_B0122DR_B0123
DHAF138119 DSY1005DSY1004DSY1003DSY1005DSY0291DSY3570DSY3571DSY2085
DGEO319795 DGEO_2759DGEO_2756DGEO_2759DGEO_2757DGEO_2759DGEO_2758DGEO_2756
CVIO243365 CV_2234CV_2235CV_2236CV_2234CV_2239CV_2234CV_1794CV_1558
CSP501479 CSE45_0698CSE45_2871CSE45_0696CSE45_0698CSE45_0698CSE45_1083CSE45_2871
CSAL290398 CSAL_1051CSAL_1041CSAL_1042CSAL_2702CSAL_2702CSAL_1041CSAL_1042
CPER289380 CPR_0797CPR_0796CPR_0795CPR_0797CPR_0778CPR_0797CPR_0796CPR_0213
CPER195103 CPF_0810CPF_0809CPF_0808CPF_0810CPF_0810CPF_0809CPF_0214
CPER195102 CPE0813CPE0812CPE0811CPE0813CPE0792CPE0813CPE0812
CMIC443906 CMM_2928CMM_2929CMM_2930CMM_2928CMM_0435CMM_2928CMM_2350CMM_2930
CMIC31964 CMS3063CMS3064CMS3065CMS3063CMS3066CMS3063CMS1571CMS3065
CJEI306537 JK1293JK1773JK1772JK1818JK1776JK1806JK1294JK1816
CGLU196627 CG0768CG0590CG0591CG0589CG0922CG0589CG0778CG0770
CEFF196164 CE0684CE0685CE0686CE0684CE0692CE0684CE0694CE0686
CDIP257309 DIP0585DIP1060DIP1061DIP1059DIP1062DIP1059DIP0584
CBOT536232 CLM_0381CLM_0805CLM_0804CLM_0381CLM_0803CLM_0381CLM_0805CLM_0804
CBOT515621 CLJ_B0366CLJ_B0760CLJ_B0839CLJ_B0366CLJ_B0758CLJ_B0366CLJ_B0760CLJ_B0839
CBOT498213 CLD_0440CLD_0078CLD_0079CLD_0440CLD_0080CLD_0440CLD_0078CLD_0078
CBOT441772 CLI_0383CLI_0757CLI_0756CLI_0383CLI_0755CLI_0383CLI_0757CLI_0756
CBOT441771 CLC_0371CLC_0742CLC_0741CLC_0371CLC_0740CLC_0371CLC_0742CLC_0741
CBOT441770 CLB_0356CLB_0727CLB_0726CLB_0356CLB_0725CLB_0356CLB_0727CLB_0726
CBOT36826 CBO0313CBO0688CBO0687CBO0313CBO0686CBO0313CBO0688CBO0687
BWEI315730 BCERKBAB4_5174BCERKBAB4_0531BCERKBAB4_0530BCERKBAB4_0532BCERKBAB4_4269BCERKBAB4_5174BCERKBAB4_5175BCERKBAB4_0530
BTHU412694 BALH_4877BALH_0555BALH_0554BALH_0556BALH_4001BALH_4877BALH_4879BALH_0554
BTHU281309 BT9727_5061BT9727_0527BT9727_0526BT9727_0528BT9727_4155BT9727_5061BT9727_5062BT9727_0526
BSUB BSU33290BSU01610BSU08450BSU32940BSU10330BSU33290BSU07500BSU07510
BPUM315750 BPUM_2990BPUM_2909BPUM_2992BPUM_2949BPUM_2994BPUM_2990BPUM_2991BPUM_2980
BLIC279010 BL00705BL01088BL02185BL02183BL00187BL00705BL01088BL01087
BHAL272558 BH1081BH3789BH3790BH1039BH1037BH1081BH1082BH1083
BCLA66692 ABC1084ABC1083ABC1082ABC1084ABC1042ABC1084ABC1083ABC3426
BCER572264 BCA_5531BCA_0651BCA_0650BCA_0652BCA_4533BCA_5531BCA_5532BCA_0650
BCER405917 BCE_5510BCE_0685BCE_0684BCE_0686BCE_5509BCE_5510BCE_5511BCE_0684
BCER315749 BCER98_3902BCER98_3903BCER98_3904BCER98_3902BCER98_3139BCER98_3902BCER98_3903BCER98_3904
BCER288681 BCE33L5078BCE33L0527BCE33L0526BCE33L0528BCE33L4166BCE33L5078BCE33L5079BCE33L0526
BCER226900 BC_5381BC_0618BC_3468BC_0619BC_4416BC_5381BC_5382BC_5383
BANT592021 BAA_5655BAA_0699BAA_0698BAA_0700BAA_4669BAA_5655BAA_5656BAA_0698
BANT568206 BAMEG_5673BAMEG_3970BAMEG_3971BAMEG_3969BAMEG_4686BAMEG_5673BAMEG_5674BAMEG_3971
BANT261594 GBAA5629GBAA0617GBAA0616GBAA0618GBAA4652GBAA5629GBAA5630GBAA0616
BANT260799 BAS5230BAS0583BAS0582BAS0584BAS4317BAS5230BAS5231BAS0582
BAMY326423 RBAM_030410RBAM_030420RBAM_030430RBAM_030060RBAM_036560RBAM_030410RBAM_030420RBAM_030430
ASP1667 ARTH_3932ARTH_3933ARTH_3934ARTH_3932ARTH_3935ARTH_3932ARTH_3934ARTH_3934
AORE350688 CLOS_2428CLOS_2429CLOS_2430CLOS_2428CLOS_2810CLOS_0319CLOS_0311
AMAR329726 AM1_3348AM1_3414AM1_A0163AM1_A0161AM1_A0182AM1_A0161AM1_A0162AM1_3350
ACAU438753 AZC_3237AZC_0185AZC_0184AZC_0183AZC_0186AZC_0183AZC_0184
AAUR290340 AAUR_0389AAUR_0558AAUR_0559AAUR_0557AAUR_0560AAUR_3763AAUR_3765AAUR_0387


Organism features enriched in list (features available for 122 out of the 131 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 2.830e-91517
Arrangment:Pairs 1.819e-948112
Disease:Anthrax 0.001843644
Disease:Botulism 0.000375755
Disease:Bubonic_plague 0.001798156
Disease:Gas_gangrene 0.008985833
Disease:Gastroenteritis 0.0068512713
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.0000215911
Disease:opportunistic_infections 0.007339645
Endospores:Yes 5.638e-153653
GC_Content_Range7:70-100 0.0002592811
Genome_Size_Range5:4-6 1.039e-865184
Genome_Size_Range5:6-10 0.00539311747
Genome_Size_Range9:4-5 0.00160813196
Genome_Size_Range9:5-6 0.00001683488
Gram_Stain:Gram_Neg 0.000024750333
Gram_Stain:Gram_Pos 7.877e-1465150
Habitat:Aquatic 0.00367751091
Habitat:Host-associated 0.000818829206
Habitat:Multiple 1.502e-659178
Habitat:Terrestrial 0.00032031531
Motility:Yes 0.002275069267
Optimal_temp.:25-35 0.0004032914
Optimal_temp.:30-37 2.571e-61318
Oxygen_Req:Anaerobic 0.001741111102
Oxygen_Req:Facultative 2.054e-664201
Pathogenic_in:Animal 0.00998792166
Pathogenic_in:Human 0.000052163213
Pathogenic_in:No 0.005020636226
Shape:Rod 0.000019192347
Temp._range:Mesophilic 0.0000157114473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 341
Effective number of orgs (counting one per cluster within 468 clusters): 284

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-21
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB81
TSP28240 Thermotoga sp.1
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB81
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SPEA398579 ncbi Shewanella pealeana ATCC 7003450
SONE211586 ncbi Shewanella oneidensis MR-11
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-41
SHAL458817 ncbi Shewanella halifaxensis HAW-EB40
SGOR29390 Streptococcus gordonii Challis0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEG203122 ncbi Saccharophagus degradans 2-400
SBAL402882 ncbi Shewanella baltica OS1851
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSOL267608 ncbi Ralstonia solanacearum GMI10000
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB51
RPAL316056 ncbi Rhodopseudomonas palustris BisB181
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RPAL258594 ncbi Rhodopseudomonas palustris CGA0091
RMAS416276 ncbi Rickettsia massiliae MTU50
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT264198 ncbi Ralstonia eutropha JMP1341
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSTU379731 ncbi Pseudomonas stutzeri A15011
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPUT351746 ncbi Pseudomonas putida F11
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1251
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PFLU205922 ncbi Pseudomonas fluorescens Pf0-11
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE51
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM50
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16221
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E1
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP375286 ncbi Janthinobacterium sp. Marseille0
ILOI283942 ncbi Idiomarina loihiensis L2TR1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE1
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP106370 ncbi Frankia sp. CcI31
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DRED349161 ncbi Desulfotomaculum reducens MI-10
DPSY177439 ncbi Desulfotalea psychrophila LSv541
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G201
DARO159087 ncbi Dechloromonas aromatica RCB1
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CJAP155077 Cellvibrio japonicus1
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB150
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSP376 Bradyrhizobium sp.0
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BPER257313 ncbi Bordetella pertussis Tohama I1
BPAR257311 ncbi Bordetella parapertussis 128221
BLON206672 ncbi Bifidobacterium longum NCC27050
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1100
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB501
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL031
APLE416269 ncbi Actinobacillus pleuropneumoniae L201
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK21
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAVE397945 ncbi Acidovorax citrulli AAC00-11
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  EG10304   EG10298   EG10296   EG10295   EG10294   EG10290   EG10289   EG10288   
ZMOB264203
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
WSUC273121
WPIP955
WPIP80849
VEIS391735 VEIS_3079
UURE95667
UURE95664
UPAR505682
TVOL273116
TTUR377629
TTHE300852 TTHB219
TSP28240 TRQ2_0758
TROS309801
TPET390874 TPET_0734
TPEN368408
TPAL243276
TMAR243274 TM_0190
TERY203124
TELO197221
TDEN326298
TDEN292415
TACI273075
SWOL335541
STOK273063
STHE322159
STHE299768
STHE264199
SSP84588
SSP64471
SSP387093
SSP1131
SSOL273057
SSED425104
SPEA398579
SONE211586 SO_3674
SMUT210007
SMAR399550
SLOI323850 SHEW_0712
SHAL458817
SGOR29390
SELO269084
SDEG203122
SBAL402882 SHEW185_1016
SALA317655
SACI56780
SACI330779
RTYP257363
RSOL267608
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057 RPD_2349
RPAL316056 RPC_4254
RPAL316055 RPE_3487
RPAL258594 RPA0150
RMAS416276
RFER338969
RFEL315456
REUT264198 REUT_A0655
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSTU379731 PST_3269
PSP312153
PSP117
PRUM264731
PPUT351746 PPUT_4552
PPEN278197
PNAP365044
PMOB403833
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616
PINT246198
PHAL326442 PSHAA2565
PGIN242619
PFUR186497
PFLU205922 PFL_4799
PDIS435591
PATL342610
PAST100379
PARS340102
PARC259536
PAER178306
PABY272844 PAB0677
OTSU357244
OCAR504832
NWIN323098
NSP387092
NSP35761
NSEN222891
NPHA348780 NP3816A
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NEUT335283
NEUR228410
NARO279238
MXAN246197 MXAN_1320
MVAN350058
MTUB419947
MTUB336982
MTHE349307 MTHE_0443
MTHE264732
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSUC221988 MS1201
MSTA339860
MSP409
MSP189918
MSP164757
MSP164756
MSED399549
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MKAN190192
MJAN243232 MJ_0087
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MCAP243233
MBUR259564 MBUR_1546
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAER449447
MAEO419665
MACE188937 MA2149
MABS561007
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LMES203120
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINT267671
LINT189518
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCHO395495
LCAS321967
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
JSP375286
ILOI283942 IL0114
IHOS453591
HWAL362976
HSOM228400
HSOM205914
HPYL85963
HPYL357544
HPY
HNEP81032
HMOD498761
HINF71421
HINF374930 CGSHIEE_08770
HINF281310
HHEP235279
HDUC233412
HBUT415426
HARS204773
HACI382638
GURA351605
GSUL243231
GOXY290633
GMET269799
GFOR411154
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP106370 FRANCCI3_4241
FRANT
FPHI484022
FNUC190304
FNOD381764
FMAG334413
FJOH376686
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAN269484
DVUL882
DRED349161
DPSY177439 DP0215
DOLE96561
DNOD246195
DDES207559 DDE_3104
DARO159087 DARO_4031
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSP78
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPEL335992
CMUR243161
CMET456442 MBOO_0986
CMAQ397948
CKOR374847
CKLU431943
CJEJ407148 C8J_1271
CJEJ360109 JJD26997_0753
CJEJ354242 CJJ81176_1354
CJEJ195099
CJEJ192222 CJ1355
CJAP155077 CJA_3772
CHYD246194
CHUT269798
CHOM360107
CFET360106
CFEL264202
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO291272
CBLO203907
CAULO
CABO218497
BTUR314724
BTHE226186
BSP376
BSP107806
BPER257313 BP0344
BPAR257311 BPP4188
BLON206672
BJAP224911
BHER314723
BGAR290434
BFRA295405
BFRA272559
BCIC186490
BBUR224326
BBRO257310 BB4658
BBAC264462
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AURANTIMONAS
ASP62977
ASP62928
ASP232721
APLE434271 APJL_2063
APLE416269 APL_2013
APHA212042
APER272557
AMAR234826
ALAI441768
AFUL224325
AFER243159
ADEH290397
ACRY349163
ACEL351607
ABUT367737
ABOR393595 ABO_2369
ABAC204669
AAVE397945 AAVE_3323
AAEO224324


Organism features enriched in list (features available for 319 out of the 341 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 5.474e-63192
Arrangment:Pairs 9.115e-1131112
Disease:Pharyngitis 0.007718088
Disease:bronchitis_and_pneumonitis 0.007718088
Endospores:Yes 3.241e-9953
GC_Content_Range4:0-40 0.0007213134213
GC_Content_Range4:60-100 0.004634667145
GC_Content_Range7:50-60 0.006661848107
Genome_Size_Range5:0-2 1.876e-20132155
Genome_Size_Range5:4-6 2.028e-870184
Genome_Size_Range5:6-10 1.844e-7947
Genome_Size_Range9:0-1 0.00001432527
Genome_Size_Range9:1-2 9.540e-15107128
Genome_Size_Range9:4-5 0.00001643496
Genome_Size_Range9:5-6 0.00176973688
Genome_Size_Range9:6-8 2.052e-6738
Gram_Stain:Gram_Neg 0.0000227206333
Gram_Stain:Gram_Pos 5.639e-1640150
Habitat:Aquatic 0.00087686391
Habitat:Host-associated 0.0031497127206
Habitat:Multiple 0.000042376178
Habitat:Terrestrial 0.0019523931
Motility:Yes 0.0011396129267
Optimal_temp.:35-37 0.00393471213
Oxygen_Req:Aerobic 0.0052527114185
Oxygen_Req:Anaerobic 0.000316271102
Oxygen_Req:Facultative 2.899e-1467201
Oxygen_Req:Microaerophilic 0.00824791518
Pathogenic_in:Human 2.426e-885213
Pathogenic_in:No 0.0002865143226
Shape:Coccus 0.00332553482
Shape:Rod 8.871e-6165347
Shape:Sphere 0.00107551719
Shape:Spiral 0.00001733034
Temp._range:Hyperthermophilic 0.00345811923
Temp._range:Mesophilic 0.0002732243473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 14
Effective number of orgs (counting one per cluster within 468 clusters): 13

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CJEI306537 ncbi Corynebacterium jeikeium K411 0.00006486598
CMIC31964 ncbi Clavibacter michiganensis sepedonicus 0.00055578618
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 382 0.00086689108
CEFF196164 ncbi Corynebacterium efficiens YS-314 0.00091379168
CGLU196627 ncbi Corynebacterium glutamicum ATCC 13032 0.00114409428
SSP1148 ncbi Synechocystis sp. PCC 6803 0.00126649548
LPLA220668 ncbi Lactobacillus plantarum WCFS1 0.002236010248
DRAD243230 ncbi Deinococcus radiodurans R1 0.002819210548
SAUR273036 ncbi Staphylococcus aureus RF122 0.003479610828
HSP64091 ncbi Halobacterium sp. NRC-1 0.00473614176
CPER289380 ncbi Clostridium perfringens SM101 0.004964711318
HSAL478009 ncbi Halobacterium salinarum R1 0.00615724366
KRAD266940 ncbi Kineococcus radiotolerans SRS30216 0.006296811658
NSP103690 ncbi Nostoc sp. PCC 7120 0.008763612148


Names of the homologs of the genes in the group in each of these orgs
  EG10304   EG10298   EG10296   EG10295   EG10294   EG10290   EG10289   EG10288   
CJEI306537 JK1293JK1773JK1772JK1818JK1776JK1806JK1294JK1816
CMIC31964 CMS3063CMS3064CMS3065CMS3063CMS3066CMS3063CMS1571CMS3065
CMIC443906 CMM_2928CMM_2929CMM_2930CMM_2928CMM_0435CMM_2928CMM_2350CMM_2930
CEFF196164 CE0684CE0685CE0686CE0684CE0692CE0684CE0694CE0686
CGLU196627 CG0768CG0590CG0591CG0589CG0922CG0589CG0778CG0770
SSP1148 SLR1318SLR1317SLR1316SLR1318SLR1319SLR1318SLR1317SLR1316
LPLA220668 LP_3104LP_3106LP_3105LP_3104LP_3103LP_3104LP_3106LP_3106
DRAD243230 DR_B0121DR_B0015DR_B0123DR_B0121DR_2588DR_B0121DR_B0122DR_B0123
SAUR273036 SAB0596SAB2056CSAB0053CSAB0596SAB0054CSAB0596SAB2056CSAB0597
HSP64091 VNG2558GVNG2560GVNG2558GVNG2558GVNG1370GVNG1370G
CPER289380 CPR_0797CPR_0796CPR_0795CPR_0797CPR_0778CPR_0797CPR_0796CPR_0213
HSAL478009 OE4587ROE4591ROE4587ROE4587ROE2952FOE2952F
KRAD266940 KRAD_1239KRAD_1240KRAD_1241KRAD_1239KRAD_3654KRAD_1239KRAD_1240KRAD_1241
NSP103690 ALL0389ALL2585ALL2586ALL2584ALR2583ALL2584ALL2585ALL2586


Organism features enriched in list (features available for 14 out of the 14 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:V-shaped_pairs 0.000536422
GC_Content_Range4:60-100 0.00734558145
GC_Content_Range7:70-100 0.0015669311
Genome_Size_Range5:2-4 0.000073312197
Genome_Size_Range9:3-4 0.0000927877
Gram_Stain:Gram_Neg 0.00011301333
Gram_Stain:Gram_Pos 0.000328910150
Optimal_temp.:25-28 0.000536422



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1314 (fructose degradation)2241040.4670
PWY-6344 (ornithine degradation II (Stickland reaction))68470.4131
IDNCAT-PWY (L-idonate degradation)2461020.4051
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))121660.4038



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10298   EG10296   EG10295   EG10294   EG10290   EG10289   EG10288   
EG103040.9994290.9994220.9997090.998780.999710.9992360.998973
EG102980.9997860.9997860.9992680.9996850.9995010.999576
EG102960.9997480.9994270.9996450.9994330.999571
EG102950.9993080.9998450.9993160.999243
EG102940.9993720.9988660.998951
EG102900.9995370.999396
EG102890.999716
EG10288



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PAIRWISE BLAST SCORES:

  EG10304   EG10298   EG10296   EG10295   EG10294   EG10290   EG10289   EG10288   
EG103040.0f0--1.1e-51-2.4e-49--
EG10298-0.0f0------
EG10296--0.0f0-----
EG102952.7e-48--0.0f0-7.3e-55--
EG10294----0.0f0---
EG102905.8e-46--3.2e-54-0.0f0--
EG10289------0.0f0-
EG10288------2.0e-270.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-2001 (ferric dicitrate uptake system) (degree of match pw to cand: 0.375, degree of match cand to pw: 0.375, average score: 0.720)
  Genes in pathway or complex:
             0.9343 0.7384 EG10286 (fecA) EG10286-MONOMER (outer membrane receptor; citrate-dependent iron transport, outer membrane receptor)
             0.4851 0.3046 EG10272 (exbD) EG10272-MONOMER (ExbD uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.3529 0.1053 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.5935 0.2515 EG11012 (tonB) EG11012-MONOMER (TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins)
   *in cand* 0.9996 0.9994 EG10290 (fecE) FECE-MONOMER (FecE)
   *in cand* 0.9994 0.9990 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9995 0.9989 EG10289 (fecD) FECD-MONOMER (FecD)
             0.9990 0.9979 EG10287 (fecB) FECB-MONOMER (FecB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9992 0.9988 EG10294 (fepB) FEPB-MONOMER (FepB)
   *in cand* 0.9996 0.9992 EG10295 (fepC) FEPC-MONOMER (FepC)
   *in cand* 0.9996 0.9994 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9996 0.9993 EG10298 (fepG) FEPG-MONOMER (FepG)
   *in cand* 0.9994 0.9988 EG10304 (fhuC) FHUC-MONOMER (FhuC)

- ABC-9-CPLX (iron dicitrate ABC transporter) (degree of match pw to cand: 0.750, degree of match cand to pw: 0.375, average score: 0.999)
  Genes in pathway or complex:
             0.9990 0.9979 EG10287 (fecB) FECB-MONOMER (FecB)
   *in cand* 0.9995 0.9989 EG10289 (fecD) FECD-MONOMER (FecD)
   *in cand* 0.9994 0.9990 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9996 0.9994 EG10290 (fecE) FECE-MONOMER (FecE)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9992 0.9988 EG10294 (fepB) FEPB-MONOMER (FepB)
   *in cand* 0.9996 0.9992 EG10295 (fepC) FEPC-MONOMER (FepC)
   *in cand* 0.9996 0.9994 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9996 0.9993 EG10298 (fepG) FEPG-MONOMER (FepG)
   *in cand* 0.9994 0.9988 EG10304 (fhuC) FHUC-MONOMER (FhuC)

- CPLX0-1944 (Ferric Enterobactin Transport System) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.500, average score: 0.650)
  Genes in pathway or complex:
             0.4851 0.3046 EG10272 (exbD) EG10272-MONOMER (ExbD uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.3529 0.1053 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.5935 0.2515 EG11012 (tonB) EG11012-MONOMER (TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins)
             0.9574 0.8354 EG10293 (fepA) EG10293-MONOMER (FepA, outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D)
   *in cand* 0.9996 0.9992 EG10295 (fepC) FEPC-MONOMER (FepC)
   *in cand* 0.9996 0.9994 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9996 0.9993 EG10298 (fepG) FEPG-MONOMER (FepG)
   *in cand* 0.9992 0.9988 EG10294 (fepB) FEPB-MONOMER (FepB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9990 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9995 0.9989 EG10289 (fecD) FECD-MONOMER (FecD)
   *in cand* 0.9996 0.9994 EG10290 (fecE) FECE-MONOMER (FecE)
   *in cand* 0.9994 0.9988 EG10304 (fhuC) FHUC-MONOMER (FhuC)

- ABC-10-CPLX (ferric enterobactin ABC transporter) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.500, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9992 0.9988 EG10294 (fepB) FEPB-MONOMER (FepB)
   *in cand* 0.9996 0.9993 EG10298 (fepG) FEPG-MONOMER (FepG)
   *in cand* 0.9996 0.9994 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9996 0.9992 EG10295 (fepC) FEPC-MONOMER (FepC)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9990 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9995 0.9989 EG10289 (fecD) FECD-MONOMER (FecD)
   *in cand* 0.9996 0.9994 EG10290 (fecE) FECE-MONOMER (FecE)
   *in cand* 0.9994 0.9988 EG10304 (fhuC) FHUC-MONOMER (FhuC)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10294 EG10295 EG10296 EG10298 (centered at EG10296)
EG10288 EG10289 EG10290 (centered at EG10289)
EG10304 (centered at EG10304)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG10304   EG10298   EG10296   EG10295   EG10294   EG10290   EG10289   EG10288   
227/623187/623213/623223/623169/623227/623205/623237/623
AAUR290340:2:Tyes2167168166169330133030
AAVE397945:0:Tyes-------0
ABAU360910:0:Tyes0----0-484
ABOR393595:0:Tyes-------0
ACAU438753:0:Tyes309121030-1
AEHR187272:0:Tyes--0---00
AHYD196024:0:Tyes2201-4-02--
AMAR329726:8:Tyes--202101-
AMAR329726:9:Tyes066-----2
AMET293826:0:Tyes0--0-0--
ANAE240017:0:Tyes119001188119011913--
AORE350688:0:Tyes2185218621872185-256680
APLE416269:0:Tyes0-------
APLE434271:0:Tno0-------
ASAL382245:5:Tyes2427-2024310-1423
ASP1667:3:Tyes01203022
ASP76114:2:Tyes--0---00
AVAR240292:3:Tyes20-2-200
BABO262698:0:Tno-----0--
BABO262698:1:Tno--0---0-
BAMB339670:3:Tno0162-0-01994
BAMB398577:3:Tno01-0-01831
BAMY326423:0:Tyes3536370649353637
BANT260799:0:Tno46601023728466046610
BANT261594:2:Tno46241023710462446250
BANT568206:2:Tyes1635120688163516362
BANT592021:2:Tno48541023906485448550
BBAC360095:0:Tyes--0---0-
BBRO257310:0:Tyes-------0
BCAN483179:1:Tno--0---0-
BCEN331271:2:Tno0--0-01693
BCEN331272:3:Tyes0--0-01818
BCER226900:1:Tyes46610279313720466146624663
BCER288681:0:Tno45681023638456845690
BCER315749:1:Tyes7247257267240724725726
BCER405917:1:Tyes45751024574457545760
BCER572264:1:Tno47731023813477347740
BCLA66692:0:Tyes40393840040392412
BHAL272558:0:Tyes442771277220444546
BHEN283166:0:Tyes--0---0-
BLIC279010:0:Tyes23271228322813047232710
BMAL243160:1:Tno10-1-1-747
BMAL320388:1:Tno735--735-735-0
BMAL320389:1:Tyes0--0-0-1005
BMEL224914:1:Tno--0---0-
BMEL359391:1:Tno--0---0-
BOVI236:1:Tyes--0---0-
BPAR257311:0:Tno-------0
BPER257313:0:Tyes-------0
BPET94624:0:Tyes-------0
BPSE272560:1:Tyes0--0-0-958
BPSE320372:1:Tno0--0-0-1127
BPSE320373:1:Tno0--0-0-1174
BPUM315750:0:Tyes800823984808170
BQUI283165:0:Tyes--0-543-00
BSP36773:2:Tyes0--0-011025
BSUB:0:Tyes3354071833179283354625626
BSUI204722:1:Tyes--0---0-
BSUI470137:1:Tno--0---0-
BTHA271848:1:Tno986--986-986-0
BTHU281309:1:Tno44981023599449844990
BTHU412694:1:Tno41581023300415841590
BTRI382640:1:Tyes--0-889-0-
BVIE269482:7:Tyes0--0-01950
BWEI315730:4:Tyes45771023658457745780
BXEN266265:1:Tyes01385-1386-13861385-
CACE272562:1:Tyes3-13-301
CBEI290402:0:Tyes157415751576157403--
CBOT36826:1:Tno037237103700372371
CBOT441770:0:Tyes035935803570359358
CBOT441771:0:Tno036035903580360359
CBOT441772:1:Tno035935803570359358
CBOT498213:1:Tno035435303520354354
CBOT508765:1:Tyes0120-01-
CBOT515621:2:Tyes037945803770379458
CBOT536232:0:Tno040740604050407406
CDES477974:0:Tyes-00---00
CDIF272563:1:Tyes0120-01-
CDIP257309:0:Tyes14694704684714680-
CEFF196164:0:Fyes012080102
CGLU196627:0:Tyes1591203050169161
CJAP155077:0:Tyes-------0
CJEI306537:0:Tyes04914905364945241534
CJEJ192222:0:Tyes----0---
CJEJ354242:2:Tyes----0---
CJEJ360109:0:Tyes0-------
CJEJ407148:0:Tno----0---
CMET456442:0:Tyes-------0
CMIC31964:2:Tyes14071408140914071410140701409
CMIC443906:2:Tyes25512552255325510255119612553
CNOV386415:0:Tyes-001-100
CPER195102:1:Tyes2120192102120-
CPER195103:0:Tno585584583585-5855840
CPER289380:3:Tyes5715705695715525715700
CSAL290398:0:Tyes10011691-169101
CSP501479:8:Fyes2214202-23812142
CTET212717:0:Tyes-001-100
CVIO243365:0:Tyes6846856866846896842380
DARO159087:0:Tyes-------0
DDES207559:0:Tyes-------0
DETH243164:0:Tyes--0----0
DGEO319795:0:Tyes0-302013
DHAF138119:0:Tyes7207197187200332133221826
DPSY177439:2:Tyes-------0
DRAD243230:1:Tyes9309593-939495
DRAD243230:3:Tyes----0---
DSHI398580:5:Tyes--10---100
DSP216389:0:Tyes--0---00
DSP255470:0:Tno--0---00
ECAR218491:0:Tyes22571740174117393012
ECOL199310:0:Tno047147247047447035074042
ECOL316407:0:Tno0433434432436411841194120
ECOL331111:6:Tno0429430428432450845094510
ECOL362663:0:Tno045545645445845429543437
ECOL364106:1:Tno042142242042442032873856
ECOL405955:2:Tyes038338438238638229643417
ECOL409438:6:Tyes0513514512516512--
ECOL413997:0:Tno0408409407411404340444045
ECOL439855:4:Tno043143243043443030533527
ECOL469008:0:Tno4073240684683682
ECOL481805:0:Tno27822328232723292325012
ECOL585034:0:Tno0416417415419415--
ECOL585035:0:Tno0454455453457452845294530
ECOL585055:0:Tno0431432430434473747394740
ECOL585056:2:Tno0532533531535469246944695
ECOL585057:0:Tno0405406404408461646174618
ECOL585397:0:Tno0403404402406483848404841
ECOL83334:0:Tno048348448248648238494331
ECOLI:0:Tno0446447445449421242134214
ECOO157:0:Tno048048147948347938574349
EFAE226185:3:Tyes27172102716-1-
EFER585054:1:Tyes023122311231323092313--
ESP42895:1:Tyes043143243043443010622775
FALN326424:0:Tyes1102011102-1102-1
FSP106370:0:Tyes-------0
FSP1855:0:Tyes102850128421--
GKAU235909:1:Tyes01309130813102769131013092768
GTHE420246:1:Tyes01130112911311128011301129
GVIO251221:0:Tyes-0----00
HAUR316274:2:Tyes2102-21364
HCHE349521:0:Tyes02290228922912287229119691968
HHAL349124:0:Tyes--0---575-
HINF374930:0:Tyes0-------
HMAR272569:7:Tyes-0-1-1--
HMAR272569:8:Tyes------0-
HMUK485914:1:Tyes-1-0-0--
HSAL478009:4:Tyes962963-962-96200
HSP64091:2:Tno938939-938-93800
ILOI283942:0:Tyes--0-----
JSP290400:1:Tyes-102--12126
KPNE272620:2:Tyes19802541254225402544254000
KRAD266940:2:Fyes21022133210
LINN272626:1:Tno247302-2473-
LMON169963:0:Tno249602-2496-
LMON265669:0:Tyes240902-2409-
LPLA220668:0:Tyes13210133
LSAK314315:0:Tyes1-2-0132
LSPH444177:1:Tyes15819673009680968301301
LWEL386043:0:Tyes239302-2393-
LXYL281090:0:Tyes0110-0--
MACE188937:0:Tyes--0-----
MAQU351348:2:Tyes18862988298729891887298902987
MBUR259564:0:Tyes-------0
MGIL350054:3:Tyes--0----0
MJAN243232:2:Tyes-0------
MLAB410358:0:Tyes-----85-0
MLOT266835:2:Tyes-00----0
MSME246196:0:Tyes2102-259985998
MSP266779:3:Tyes-1321130313211321
MSP400668:0:Tyes5442322032220226227228
MSUC221988:0:Tyes0-------
MTHE349307:0:Tyes-0------
MXAN246197:0:Tyes-------0
NFAR247156:2:Tyes701702703701-7010703
NPHA348780:2:Tyes------0-
NSP103690:6:Tyes02215221622142213221422152216
OANT439375:4:Tyes6471250012531252125300
OIHE221109:0:Tyes32130191194193
PABY272844:0:Tyes------0-
PACN267747:0:Tyes-257344---00
PAER208963:0:Tyes36470132311
PAER208964:0:Tno03201022
PCAR338963:0:Tyes-00----0
PCRY335284:1:Tyes21-2-210
PENT384676:0:Tyes----0--530
PFLU205922:0:Tyes-------0
PFLU216595:1:Tyes0--03012
PFLU220664:0:Tyes03201022
PHAL326442:1:Tyes-------0
PHOR70601:0:Tyes-0----0-
PING357804:0:Tyes-0----0-
PLUM243265:0:Fyes321831850321
PMEN399739:0:Tyes01725172505-61725
PMUL272843:1:Tyes01-03012
PPRO298386:1:Tyes--20-0--
PPRO298386:2:Tyes0------538
PPUT160488:0:Tno----0--2084
PPUT351746:0:Tyes-------0
PPUT76869:0:Tno03201022902
PSP296591:2:Tyes-1-03012
PSP56811:2:Tyes441---0---
PSTU379731:0:Tyes-------0
PSYR205918:0:Tyes19311930192919313012
PSYR223283:2:Tyes0--03012
RCAS383372:0:Tyes-0----00
RDEN375451:4:Tyes-666-----0
RETL347834:3:Tyes0----0--
RETL347834:5:Tyes-00---00
REUT264198:3:Tyes-------0
REUT381666:2:Tyes------00
RLEG216596:3:Tyes0-------
RLEG216596:6:Tyes-645645---0645
RMET266264:1:Tyes-0------
RMET266264:2:Tyes------00
RPAL258594:0:Tyes-------0
RPAL316055:0:Tyes-------0
RPAL316056:0:Tyes--0-----
RPAL316057:0:Tyes------0-
RRUB269796:1:Tyes------00
RSAL288705:0:Tyes118116662118116700-2
RSP101510:3:Fyes305130523053305103051-2026
RSP357808:0:Tyes-0----00
RSPH272943:3:Tyes-120-022
RSPH272943:4:Tyes0-------
RSPH349101:1:Tno-120-022
RSPH349101:2:Tno0-------
RSPH349102:4:Tyes2102-2-0
RSPH349102:5:Tyes------0-
RXYL266117:0:Tyes32130321
SAGA205921:0:Tno0--0-0--
SAGA208435:0:Tno0--0-0--
SAGA211110:0:Tyes0--0-0--
SARE391037:0:Tyes2102-2-1716
SAUR158878:1:Tno550-055015502134551
SAUR158879:1:Tno525-052515252014526
SAUR196620:0:Tno542-054215422092543
SAUR273036:0:Tno5312003053115312003532
SAUR282458:0:Tno538-053815382133539
SAUR282459:0:Tno549-054915492066550
SAUR359786:1:Tno585-058515852157586
SAUR359787:1:Tno575-057515752105576
SAUR367830:3:Tno503-050315031937504
SAUR418127:0:Tyes548-054815482122549
SAUR426430:0:Tno574-057415742089575
SAUR93061:0:Fno547-054715472284548
SAUR93062:1:Tno593-059315932018594
SAVE227882:1:Fyes2102-210
SBAL399599:3:Tyes------00
SBAL402882:1:Tno------0-
SBOY300268:1:Tyes0290291289293289--
SCO:2:Fyes129612971298129601497497
SDEN318161:0:Tyes-340-----0
SDYS300267:1:Tyes0333334332336386738683869
SENT209261:0:Tno019751974197619721976--
SENT220341:0:Tno0368369367371367--
SENT295319:0:Tno018621861186318591863--
SENT321314:2:Tno0438439437441437--
SENT454169:2:Tno0462463461465461--
SEPI176279:1:Tyes0--01441014391440
SEPI176280:0:Tno0--01404014021403
SERY405948:0:Tyes21025129239140
SFLE198214:0:Tyes0357358356360356--
SFLE373384:0:Tno0379380378382378--
SFUM335543:0:Tyes------16220
SGLO343509:2:Tyes0120-0--
SGLO343509:3:Tyes-------0
SHAE279808:0:Tyes1527-1526152701527971526
SHIGELLA:0:Tno0346347345349345--
SLAC55218:1:Fyes321303-1
SLOI323850:0:Tyes0-------
SMED366394:2:Tyes------00
SMED366394:3:Tyes321303--
SMEL266834:0:Tyes0120-0-2
SMEL266834:2:Tyes------0-
SONE211586:1:Tyes------0-
SPNE1313:0:Tyes3-1303--
SPNE170187:0:Tyes4-1404--
SPNE171101:0:Tno4-1404--
SPNE487213:0:Tno3-1303--
SPNE487214:0:Tno3-1303--
SPNE488221:0:Tno3-1303--
SPRO399741:1:Tyes18351276127512771273127700
SPYO160490:0:Tno0--0-0-1117
SPYO186103:0:Tno0--0-0-1200
SPYO193567:0:Tno1284--1284-1284-0
SPYO198466:0:Tno0--0-0-1276
SPYO286636:0:Tno0--0-0-1187
SPYO293653:0:Tno0--0-0-1209
SPYO319701:0:Tyes0--0-0-1210
SPYO370551:0:Tno0--0-0-1221
SPYO370552:0:Tno0--0-0-1290
SPYO370553:0:Tno0--0-0-1227
SPYO370554:0:Tyes0--0-0-1282
SRUB309807:1:Tyes-14741474---01474
SSAP342451:2:Tyes1412141014111412-141210
SSON300269:1:Tyes0358359357361407040714072
SSP1148:0:Tyes21023210
SSP292414:2:Tyes-0-----2632
SSP321327:0:Tyes-1-0-011
SSP321332:0:Tyes-1-0-011
SSP644076:3:Fyes1241012412712400
SSP94122:1:Tyes40-----0-
SSUI391295:0:Tyes--0-1---
SSUI391296:0:Tyes3-0-13--
STHE292459:0:Tyes0120-022
STRO369723:0:Tyes91090990891030-2
STYP99287:1:Tyes0396397395399395--
TCRU317025:0:Tyes-0-----0
TDEN243275:0:Tyes0171817180--17181718
TFUS269800:0:Tyes0120-02075-
TKOD69014:0:Tyes-0----0-
TLET416591:0:Tyes-1-0-01-
TMAR243274:0:Tyes-0------
TPET390874:0:Tno-0------
TPSE340099:0:Tyes-01224-1225---
TSP1755:0:Tyes-0780-781---
TSP28240:0:Tyes-0------
TTEN273068:0:Tyes-14311-0---
TTHE262724:0:Tyes----0-33
TTHE300852:1:Tyes-------0
TWHI203267:0:Tyes-120-0--
TWHI218496:0:Tno-120-0--
UMET351160:0:Tyes--0---00
VCHO:0:Tyes0615614616613616--
VCHO345073:1:Tno220021303--
VEIS391735:1:Tyes-------0
VFIS312309:1:Tyes0--06690814-
VFIS312309:2:Tyes-------0
VPAR223926:0:Tyes0217-216219216217218
VVUL196600:1:Tyes1092--10928961092-0
VVUL216895:0:Tno155---0155-709
XAUT78245:1:Tyes0-----14191419
YENT393305:1:Tyes3843188318731893186318900
YPES187410:5:Tno261-210221042958210400
YPES214092:3:Tno2980-12131211407121100
YPES349746:2:Tno713-2847284902849370370
YPES360102:3:Tyes2093-202295032233223
YPES377628:2:Tno142-192019220192228842884
YPES386656:2:Tno--949951095132253225
YPSE273123:2:Tno408-123412323046123200
YPSE349747:2:Tno2684-180518070180731543154



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