CANDIDATE ID: 237

CANDIDATE ID: 237

NUMBER OF GENES: 8
AVERAGE SCORE:    9.9939086e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    5.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG10303 (fhuB) (b0153)
   Products of gene:
     - FHUB-MONOMER (FhuB)
     - ABC-11-CPLX (iron (III) hydroxamate ABC transporter)
       Reactions:
        ATP + iron (III) hydroxamate complex[periplasmic space] + H2O  ->  ADP + phosphate + iron (III) hydroxamate complex[cytosol]
     - CPLX0-1981 (ferrichrome uptake system)
       Reactions:
        iron (III) hydroxamate complex[extracellular space]  ->  iron (III) hydroxamate complex[cytosol]

- EG10298 (fepG) (b0589)
   Products of gene:
     - FEPG-MONOMER (FepG)
     - ABC-10-CPLX (ferric enterobactin ABC transporter)
       Reactions:
        ATP + ferric enterobactin[periplasmic space] + H2O  ->  ADP + phosphate + ferric enterobactin[cytosol]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]

- EG10296 (fepD) (b0590)
   Products of gene:
     - FEPD-MONOMER (FepD)
     - ABC-10-CPLX (ferric enterobactin ABC transporter)
       Reactions:
        ATP + ferric enterobactin[periplasmic space] + H2O  ->  ADP + phosphate + ferric enterobactin[cytosol]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]

- EG10295 (fepC) (b0588)
   Products of gene:
     - FEPC-MONOMER (FepC)
     - ABC-10-CPLX (ferric enterobactin ABC transporter)
       Reactions:
        ATP + ferric enterobactin[periplasmic space] + H2O  ->  ADP + phosphate + ferric enterobactin[cytosol]
     - CPLX0-1944 (Ferric Enterobactin Transport System)
       Reactions:
        ferric enterobactin[extracellular space]  ->  ferric enterobactin[cytosol]

- EG10290 (fecE) (b4287)
   Products of gene:
     - FECE-MONOMER (FecE)
     - ABC-9-CPLX (iron dicitrate ABC transporter)
       Reactions:
        ATP + ferric dicitrate[periplasmic space] + H2O  ->  ADP + phosphate + ferric dicitrate[cytosol]
     - CPLX0-2001 (ferric dicitrate uptake system)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[cytosol]

- EG10289 (fecD) (b4288)
   Products of gene:
     - FECD-MONOMER (FecD)
     - ABC-9-CPLX (iron dicitrate ABC transporter)
       Reactions:
        ATP + ferric dicitrate[periplasmic space] + H2O  ->  ADP + phosphate + ferric dicitrate[cytosol]
     - CPLX0-2001 (ferric dicitrate uptake system)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[cytosol]

- EG10288 (fecC) (b4289)
   Products of gene:
     - FECC-MONOMER (FecC)
     - ABC-9-CPLX (iron dicitrate ABC transporter)
       Reactions:
        ATP + ferric dicitrate[periplasmic space] + H2O  ->  ADP + phosphate + ferric dicitrate[cytosol]
     - CPLX0-2001 (ferric dicitrate uptake system)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[cytosol]

- EG10287 (fecB) (b4290)
   Products of gene:
     - FECB-MONOMER (FecB)
     - ABC-9-CPLX (iron dicitrate ABC transporter)
       Reactions:
        ATP + ferric dicitrate[periplasmic space] + H2O  ->  ADP + phosphate + ferric dicitrate[cytosol]
     - CPLX0-2001 (ferric dicitrate uptake system)
       Reactions:
        ferric dicitrate[extracellular space]  ->  ferric dicitrate[cytosol]



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ORGANISMS CONTAINING AT LEAST 7 GENES FROM THE GROUP:

Total number of orgs: 130
Effective number of orgs (counting one per cluster within 468 clusters): 81

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317587
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329537
YPES386656 ncbi Yersinia pestis Pestoides F7
YPES377628 ncbi Yersinia pestis Nepal5167
YPES360102 ncbi Yersinia pestis Antiqua7
YPES349746 ncbi Yersinia pestis Angola7
YPES214092 ncbi Yersinia pestis CO927
YPES187410 ncbi Yersinia pestis KIM 107
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80817
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106337
TDEN243275 ncbi Treponema denticola ATCC 354057
STHE292459 ncbi Symbiobacterium thermophilum IAM 148637
SSP1148 ncbi Synechocystis sp. PCC 68038
SSON300269 ncbi Shigella sonnei Ss0468
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153058
SPRO399741 ncbi Serratia proteamaculans 5687
SMED366394 ncbi Sinorhizobium medicae WSM4198
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14357
SGLO343509 ncbi Sodalis glossinidius morsitans7
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23387
SDYS300267 ncbi Shigella dysenteriae Sd1978
SCO ncbi Streptomyces coelicolor A3(2)8
SAVE227882 ncbi Streptomyces avermitilis MA-46807
SAUR93062 ncbi Staphylococcus aureus aureus COL7
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83257
SAUR426430 ncbi Staphylococcus aureus aureus Newman7
SAUR418127 ncbi Staphylococcus aureus aureus Mu37
SAUR367830 Staphylococcus aureus aureus USA3007
SAUR359787 ncbi Staphylococcus aureus aureus JH17
SAUR359786 ncbi Staphylococcus aureus aureus JH97
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4767
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2527
SAUR273036 ncbi Staphylococcus aureus RF1228
SAUR196620 ncbi Staphylococcus aureus aureus MW27
SAUR158879 ncbi Staphylococcus aureus aureus N3157
SAUR158878 ncbi Staphylococcus aureus aureus Mu507
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99418
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170257
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170298
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.18
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332097
RETL347834 ncbi Rhizobium etli CFN 427
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a7
PSP296591 ncbi Polaromonas sp. JS6667
PMUL272843 ncbi Pasteurella multocida multocida Pm707
PMEN399739 ncbi Pseudomonas mendocina ymp7
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO18
PCRY335284 ncbi Psychrobacter cryohalolentis K57
OIHE221109 ncbi Oceanobacillus iheyensis HTE8318
OANT439375 ncbi Ochrobactrum anthropi ATCC 491888
NSP103690 ncbi Nostoc sp. PCC 71208
NFAR247156 ncbi Nocardia farcinica IFM 101528
MSP400668 ncbi Marinomonas sp. MWYL18
MSP266779 ncbi Chelativorans sp. BNC18
MSME246196 ncbi Mycobacterium smegmatis MC2 1557
MAQU351348 ncbi Marinobacter aquaeolei VT88
LSPH444177 ncbi Lysinibacillus sphaericus C3-418
KRAD266940 ncbi Kineococcus radiotolerans SRS302168
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785788
JSP290400 ncbi Jannaschia sp. CCS17
HCHE349521 ncbi Hahella chejuensis KCTC 23968
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237798
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-28
GKAU235909 ncbi Geobacillus kaustophilus HTA4268
ESP42895 Enterobacter sp.8
ECOO157 ncbi Escherichia coli O157:H7 EDL9338
ECOL83334 Escherichia coli O157:H78
ECOL585397 ncbi Escherichia coli ED1a8
ECOL585057 ncbi Escherichia coli IAI398
ECOL585056 ncbi Escherichia coli UMN0268
ECOL585055 ncbi Escherichia coli 559898
ECOL585035 ncbi Escherichia coli S888
ECOL481805 ncbi Escherichia coli ATCC 87398
ECOL469008 ncbi Escherichia coli BL21(DE3)8
ECOL439855 ncbi Escherichia coli SMS-3-58
ECOL413997 ncbi Escherichia coli B str. REL6068
ECOL405955 ncbi Escherichia coli APEC O18
ECOL364106 ncbi Escherichia coli UTI898
ECOL362663 ncbi Escherichia coli 5368
ECOL331111 ncbi Escherichia coli E24377A8
ECOL316407 ncbi Escherichia coli K-12 substr. W31108
ECOL199310 ncbi Escherichia coli CFT0738
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10438
DRAD243230 ncbi Deinococcus radiodurans R17
DHAF138119 ncbi Desulfitobacterium hafniense Y518
DGEO319795 ncbi Deinococcus geothermalis DSM 113007
CVIO243365 ncbi Chromobacterium violaceum ATCC 124727
CTET212717 ncbi Clostridium tetani E887
CSP501479 Citreicella sp. SE457
CSAL290398 ncbi Chromohalobacter salexigens DSM 30438
CPER289380 ncbi Clostridium perfringens SM1018
CPER195103 ncbi Clostridium perfringens ATCC 131247
CPER195102 ncbi Clostridium perfringens 137
CNOV386415 ncbi Clostridium novyi NT7
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3828
CMIC31964 ncbi Clavibacter michiganensis sepedonicus8
CJEI306537 ncbi Corynebacterium jeikeium K4118
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130327
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto7
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6578
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B7
CBOT498213 ncbi Clostridium botulinum B1 str. Okra8
CBOT441772 ncbi Clostridium botulinum F str. Langeland8
CBOT441771 ncbi Clostridium botulinum A str. Hall8
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193978
CBOT36826 Clostridium botulinum A8
BWEI315730 ncbi Bacillus weihenstephanensis KBAB48
BTHU412694 ncbi Bacillus thuringiensis Al Hakam8
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-278
BSUB ncbi Bacillus subtilis subtilis 1688
BPUM315750 ncbi Bacillus pumilus SAFR-0328
BLIC279010 ncbi Bacillus licheniformis ATCC 145808
BHAL272558 ncbi Bacillus halodurans C-1258
BCLA66692 ncbi Bacillus clausii KSM-K168
BCER572264 ncbi Bacillus cereus 03BB1028
BCER405917 Bacillus cereus W8
BCER315749 ncbi Bacillus cytotoxicus NVH 391-988
BCER288681 ncbi Bacillus cereus E33L8
BCER226900 ncbi Bacillus cereus ATCC 145798
BANT592021 ncbi Bacillus anthracis A02488
BANT568206 ncbi Bacillus anthracis CDC 6848
BANT261594 ncbi Bacillus anthracis Ames Ancestor8
BANT260799 ncbi Bacillus anthracis Sterne8
BAMY326423 ncbi Bacillus amyloliquefaciens FZB428
BAMB398577 ncbi Burkholderia ambifaria MC40-67
BAMB339670 ncbi Burkholderia ambifaria AMMD7
AVAR240292 ncbi Anabaena variabilis ATCC 294137
AORE350688 ncbi Alkaliphilus oremlandii OhILAs8
AMAR329726 ncbi Acaryochloris marina MBIC110178
AAUR290340 ncbi Arthrobacter aurescens TC18


Names of the homologs of the genes in the group in each of these orgs
  EG10303   EG10298   EG10296   EG10295   EG10290   EG10289   EG10288   EG10287   
YPSE349747 YPSIP31758_3331YPSIP31758_2442YPSIP31758_2444YPSIP31758_2444YPSIP31758_3804YPSIP31758_3804YPSIP31758_4091
YPSE273123 YPTB0741YPTB1547YPTB1545YPTB1545YPTB0337YPTB0337YPTB3857
YPES386656 YPDSF_2967YPDSF_1441YPDSF_1443YPDSF_1443YPDSF_3690YPDSF_3690YPDSF_3765
YPES377628 YPN_0700YPN_2445YPN_2447YPN_2447YPN_3387YPN_3387YPN_3670
YPES360102 YPA_2890YPA_0829YPA_0827YPA_0827YPA_4002YPA_4002YPA_4113
YPES349746 YPANGOLA_A0996YPANGOLA_A3184YPANGOLA_A3186YPANGOLA_A3186YPANGOLA_A0647YPANGOLA_A0647YPANGOLA_A4143
YPES214092 YPO3390YPO1535YPO1533YPO1533YPO0280YPO0280YPO4022
YPES187410 Y0798Y2635Y2637Y2637Y0540Y0540Y4043
YENT393305 YE0732YE3620YE3619YE3621YE3621YE0328YE0328
VPAR223926 VPA1438VPA1653VPA1652VPA1652VPA1653VPA1654VPA1655
TDEN243275 TDE_1179TDE_2357TDE_2357TDE_0625TDE_2357TDE_2357TDE_1180
STHE292459 STH1284STH1285STH1283STH1283STH1285STH1285STH1604
SSP1148 SLR1316SLR1317SLR1316SLR1318SLR1318SLR1317SLR1316SLR1319
SSON300269 SSO_0165SSO_0540SSO_0541SSO_0539SSO_4459SSO_4460SSO_4461SSO_4462
SSAP342451 SSP2072SSP2071SSP2072SSP2073SSP2073SSP0711SSP0710SSP0709
SPRO399741 SPRO_3976SPRO_3425SPRO_3424SPRO_3426SPRO_3426SPRO_2166SPRO_2166
SMED366394 SMED_2493SMED_2493SMED_2492SMED_2494SMED_2494SMED_4080SMED_4080SMED_2491
SHAE279808 SH2246SH2246SH2247SH2247SH0865SH2246SH0863
SGLO343509 SGP1_0036SGP1_0036SGP1_0037SGP1_0035SGP1_0035SG1539SGP1_0038
SERY405948 SACE_0412SACE_0411SACE_0413SACE_0413SACE_4374SACE_0411SACE_1287
SDYS300267 SDY_0169SDY_0520SDY_0521SDY_0519SDY_4293SDY_4294SDY_4295SDY_0523
SCO SCO7398SCO1786SCO1787SCO1785SCO0495SCO0997SCO0997SCO7399
SAVE227882 SAV601SAV6492SAV6491SAV6493SAV6493SAV6492SAV6491
SAUR93062 SACOL2166SACOL0098SACOL0704SACOL0704SACOL2165SACOL0705SACOL2167
SAUR93061 SAOUHSC_02428SAOUHSC_00072SAOUHSC_00652SAOUHSC_00652SAOUHSC_02427SAOUHSC_00653SAOUHSC_02430
SAUR426430 NWMN_2077NWMN_0058NWMN_0616NWMN_0616NWMN_2076NWMN_0617NWMN_2078
SAUR418127 SAHV_2160SAHV_0113SAHV_0644SAHV_0644SAHV_2159SAHV_0645SAHV_2161
SAUR367830 SAUSA300_2135SAUSA300_0116SAUSA300_0633SAUSA300_0633SAUSA300_2134SAUSA300_0634SAUSA300_2136
SAUR359787 SAURJH1_2245SAURJH1_0105SAURJH1_0685SAURJH1_0685SAURJH1_2244SAURJH1_0686SAURJH1_2246
SAUR359786 SAURJH9_2207SAURJH9_0101SAURJH9_0670SAURJH9_0670SAURJH9_2206SAURJH9_0671SAURJH9_2208
SAUR282459 SAS2077SAS0088SAS0612SAS0612SAS2076SAS0613SAS2078
SAUR282458 SAR0658SAR0117SAR0657SAR0657SAR2266SAR0658SAR1011
SAUR273036 SAB2057CSAB2056CSAB0053CSAB0596SAB0596SAB2056CSAB0597SAB2058C
SAUR196620 MW2102MW0087MW0609MW0609MW2101MW0610MW2103
SAUR158879 SA1978SA0110SA0602SA0602SA1977SA0603SA1979
SAUR158878 SAV2176SAV0114SAV0647SAV0647SAV2175SAV0648SAV2177
RXYL266117 RXYL_0415RXYL_0415RXYL_0414RXYL_0416RXYL_0416RXYL_0415RXYL_0414RXYL_0413
RSPH349102 RSPH17025_3333RSPH17025_3332RSPH17025_3334RSPH17025_3334RSPH17025_1384RSPH17025_3332RSPH17025_4264
RSPH349101 RSPH17029_0087RSPH17029_3059RSPH17029_3060RSPH17029_3058RSPH17029_3058RSPH17029_3060RSPH17029_3060RSPH17029_3806
RSPH272943 RSP_1438RSP_3414RSP_3415RSP_3413RSP_3413RSP_3415RSP_3415RSP_3079
RSAL288705 RSAL33209_2062RSAL33209_3347RSAL33209_1683RSAL33209_2862RSAL33209_1681RSAL33209_1683RSAL33209_1684
RETL347834 RHE_PF00465RHE_CH03270RHE_CH03270RHE_PE00282RHE_CH03270RHE_CH03270RHE_CH02683
PSYR205918 PSYR_2592PSYR_2591PSYR_2593PSYR_0664PSYR_0665PSYR_0666PSYR_0667
PSP296591 BPRO_4778BPRO_4778BPRO_4777BPRO_4777BPRO_4778BPRO_4779BPRO_4780
PMUL272843 PM0129PM0129PM0128PM0128PM0129PM0130PM0131
PMEN399739 PMEN_3768PMEN_4564PMEN_4564PMEN_2860PMEN_2866PMEN_4564PMEN_2865
PLUM243265 PLU4448PLU4449PLU4624PLU4626PLU4450PLU4449PLU4448PLU4447
PCRY335284 PCRYO_1284PCRYO_1284PCRYO_1285PCRYO_1285PCRYO_1284PCRYO_1283PCRYO_1282
OIHE221109 OB0452OB0261OB0260OB0262OB0450OB0453OB0452OB0542
OANT439375 OANT_2778OANT_4082OANT_2826OANT_4085OANT_4085OANT_2826OANT_2826OANT_3797
NSP103690 ALL0387ALL2585ALL2586ALL2584ALL2584ALL2585ALL2586ALR2583
NFAR247156 NFA18240NFA25200NFA25210NFA25190NFA25190NFA18240NFA25210NFA42960
MSP400668 MMWYL1_1008MMWYL1_0465MMWYL1_3637MMWYL1_3639MMWYL1_0690MMWYL1_0691MMWYL1_0692MMWYL1_0693
MSP266779 MESO_0135MESO_1443MESO_0134MESO_0136MESO_0136MESO_1443MESO_1443MESO_0133
MSME246196 MSMEG_0013MSMEG_0012MSMEG_0015MSMEG_0015MSMEG_6063MSMEG_6063MSMEG_0438
MAQU351348 MAQU_2190MAQU_3298MAQU_3297MAQU_3299MAQU_3299MAQU_0275MAQU_3297MAQU_2189
LSPH444177 BSPH_1674BSPH_1674BSPH_0991BSPH_1675BSPH_1675BSPH_0992BSPH_0992BSPH_1671
KRAD266940 KRAD_1240KRAD_1240KRAD_1241KRAD_1239KRAD_1239KRAD_1240KRAD_1241KRAD_3654
KPNE272620 GKPORF_B4457GKPORF_B5026GKPORF_B5027GKPORF_B5025GKPORF_B5025GKPORF_B2423GKPORF_B2423GKPORF_B5029
JSP290400 JANN_2124JANN_2124JANN_2123JANN_2125JANN_2135JANN_2248JANN_2122
HCHE349521 HCH_01394HCH_03793HCH_03792HCH_03795HCH_03795HCH_03457HCH_03456HCH_03455
HAUR316274 HAUR_1736HAUR_1736HAUR_1735HAUR_1737HAUR_1737HAUR_1736HAUR_2100HAUR_1739
GTHE420246 GTNG_1319GTNG_1319GTNG_1318GTNG_1320GTNG_0175GTNG_1319GTNG_1318GTNG_1317
GKAU235909 GK1460GK1460GK1459GK1461GK1461GK1460GK2900GK2901
ESP42895 ENT638_0693ENT638_1121ENT638_1122ENT638_1120ENT638_1120ENT638_1738ENT638_3440ENT638_1124
ECOO157 FHUBFEPGFEPDFEPCFEPCZ4384CHUUFEPB
ECOL83334 ECS0157ECS0628ECS0629ECS0627ECS0627ECS3915ECS4386ECS0631
ECOL585397 ECED1_0159ECED1_0586ECED1_0587ECED1_0585ECED1_5151ECED1_5153ECED1_5154ECED1_5155
ECOL585057 ECIAI39_0157ECIAI39_0566ECIAI39_0567ECIAI39_0565ECIAI39_4765ECIAI39_4766ECIAI39_4767ECIAI39_4768
ECOL585056 ECUMN_0150ECUMN_0683ECUMN_0684ECUMN_0682ECUMN_4855ECUMN_4857ECUMN_4858ECUMN_4859
ECOL585055 EC55989_0147EC55989_0581EC55989_0582EC55989_0580EC55989_4959EC55989_4961EC55989_4962EC55989_4963
ECOL585035 ECS88_0164ECS88_0628ECS88_0629ECS88_0627ECS88_4860ECS88_4861ECS88_4862ECS88_4863
ECOL481805 ECOLC_3506ECOLC_3055ECOLC_3054ECOLC_3056ECOLC_0739ECOLC_0740ECOLC_0741ECOLC_0742
ECOL469008 ECBD_3465ECBD_3066ECBD_3065ECBD_3067ECBD_3751ECBD_3750ECBD_3749ECBD_3748
ECOL439855 ECSMS35_0165ECSMS35_0609ECSMS35_0610ECSMS35_0607ECSMS35_0607ECSMS35_3321ECSMS35_3808ECSMS35_0612
ECOL413997 ECB_00152ECB_00556ECB_00557ECB_00555ECB_04153ECB_04154ECB_04155ECB_04156
ECOL405955 APECO1_1832APECO1_1460APECO1_1459APECO1_1461APECO1_1461APECO1_3386APECO1_2943APECO1_1457
ECOL364106 UTI89_C0169UTI89_C0591UTI89_C0592UTI89_C0590UTI89_C0590UTI89_C3461UTI89_C4037UTI89_C0594
ECOL362663 ECP_0163ECP_0621ECP_0622ECP_0620ECP_0620ECP_3119ECP_3604ECP_0624
ECOL331111 ECE24377A_0158ECE24377A_0609ECE24377A_0610ECE24377A_0607ECE24377A_4864ECE24377A_4865ECE24377A_4866ECE24377A_4867
ECOL316407 ECK0152:JW0149:B0153ECK0582:JW0581:B058ECK0583:JW0582:B0590ECK0581:JW0580:B0588ECK4277:JW4247:B4287ECK4278:JW4248:B4288ECK4279:JW4249:B4289ECK4280:JW4250:B4290
ECOL199310 C0188C0676C0677C0675C0675C3773C4317C0679
ECAR218491 ECA3310ECA2807ECA2808ECA2806ECA1073ECA1074ECA1075ECA1076
DRAD243230 DR_B0122DR_B0015DR_B0123DR_B0121DR_B0121DR_B0122DR_B0123
DHAF138119 DSY3873DSY1004DSY1003DSY1005DSY3570DSY3571DSY2085DSY3566
DGEO319795 DGEO_2758DGEO_2756DGEO_2759DGEO_2759DGEO_2758DGEO_2756DGEO_2757
CVIO243365 CV_1794CV_2235CV_2236CV_2234CV_2234CV_1794CV_1558
CTET212717 CTC_01196CTC_01196CTC_01196CTC_01197CTC_01197CTC_01196CTC_01196
CSP501479 CSE45_2871CSE45_0696CSE45_0698CSE45_0698CSE45_1083CSE45_2871CSE45_3020
CSAL290398 CSAL_1049CSAL_1041CSAL_1042CSAL_2702CSAL_2702CSAL_1041CSAL_1042CSAL_1043
CPER289380 CPR_0796CPR_0796CPR_0795CPR_0797CPR_0797CPR_0796CPR_0213CPR_0778
CPER195103 CPF_0809CPF_0809CPF_0808CPF_0810CPF_0810CPF_0809CPF_0214
CPER195102 CPE0812CPE0812CPE0811CPE0813CPE0813CPE0812CPE0792
CNOV386415 NT01CX_1447NT01CX_1447NT01CX_1447NT01CX_1448NT01CX_1448NT01CX_1447NT01CX_1447
CMIC443906 CMM_0167CMM_2929CMM_2930CMM_2928CMM_2928CMM_2350CMM_2930CMM_2349
CMIC31964 CMS0337CMS3064CMS3065CMS3063CMS3063CMS1571CMS3065CMS3066
CJEI306537 JK1294JK1773JK1772JK1818JK1806JK1294JK1816JK1296
CGLU196627 CG0590CG0591CG0589CG0589CG0778CG0770CG3404
CBOT536232 CLM_0805CLM_0804CLM_0381CLM_0381CLM_0805CLM_0804CLM_0803
CBOT515621 CLJ_B0364CLJ_B0760CLJ_B0839CLJ_B0366CLJ_B0366CLJ_B0760CLJ_B0839CLJ_B0838
CBOT508765 CLL_A2114CLL_A2114CLL_A2115CLL_A2113CLL_A2113CLL_A2114CLL_A2116
CBOT498213 CLD_0442CLD_0078CLD_0079CLD_0440CLD_0440CLD_0078CLD_0078CLD_0080
CBOT441772 CLI_0381CLI_0757CLI_0756CLI_0383CLI_0383CLI_0757CLI_0756CLI_0755
CBOT441771 CLC_0369CLC_0742CLC_0741CLC_0371CLC_0371CLC_0742CLC_0741CLC_0740
CBOT441770 CLB_0354CLB_0727CLB_0726CLB_0356CLB_0356CLB_0727CLB_0726CLB_0725
CBOT36826 CBO0311CBO0688CBO0687CBO0313CBO0313CBO0688CBO0687CBO0686
BWEI315730 BCERKBAB4_4357BCERKBAB4_0531BCERKBAB4_0530BCERKBAB4_0532BCERKBAB4_5174BCERKBAB4_5175BCERKBAB4_0530BCERKBAB4_2078
BTHU412694 BALH_4114BALH_0555BALH_0554BALH_0556BALH_4877BALH_4879BALH_0554BALH_2016
BTHU281309 BT9727_4265BT9727_0527BT9727_0526BT9727_0528BT9727_5061BT9727_5062BT9727_0526BT9727_2038
BSUB BSU33300BSU01610BSU08450BSU32940BSU33290BSU07500BSU07510BSU07520
BPUM315750 BPUM_2991BPUM_2909BPUM_2992BPUM_2949BPUM_2990BPUM_2991BPUM_2980BPUM_2911
BLIC279010 BL00704BL01088BL02185BL02183BL00705BL01088BL01087BL01086
BHAL272558 BH1038BH3789BH3790BH1039BH1081BH1082BH1083BH3791
BCLA66692 ABC3751ABC1083ABC1082ABC1084ABC1084ABC1083ABC3426ABC2967
BCER572264 BCA_4636BCA_0651BCA_0650BCA_0652BCA_5531BCA_5532BCA_0650BCA_2338
BCER405917 BCE_0685BCE_0685BCE_0684BCE_0686BCE_5510BCE_5511BCE_0684BCE_2283
BCER315749 BCER98_3903BCER98_3903BCER98_3904BCER98_3902BCER98_3902BCER98_3903BCER98_3904BCER98_2409
BCER288681 BCE33L0527BCE33L0527BCE33L0526BCE33L0528BCE33L5078BCE33L5079BCE33L0526BCE33L2036
BCER226900 BC_0618BC_0618BC_3468BC_0619BC_5381BC_5382BC_5383BC_2208
BANT592021 BAA_4782BAA_0699BAA_0698BAA_0700BAA_5655BAA_5656BAA_0698BAA_2317
BANT568206 BAMEG_4801BAMEG_3970BAMEG_3971BAMEG_3969BAMEG_5673BAMEG_5674BAMEG_3971BAMEG_2341
BANT261594 GBAA4767GBAA0617GBAA0616GBAA0618GBAA5629GBAA5630GBAA0616GBAA2255
BANT260799 BAS4425BAS0583BAS0582BAS0584BAS5230BAS5231BAS0582BAS2099
BAMY326423 RBAM_030420RBAM_030420RBAM_030430RBAM_030060RBAM_030410RBAM_030420RBAM_030430RBAM_010510
BAMB398577 BAMMC406_1554BAMMC406_1554BAMMC406_1553BAMMC406_1553BAMMC406_1554BAMMC406_2371BAMMC406_1556
BAMB339670 BAMB_1533BAMB_1695BAMB_1532BAMB_1532BAMB_1533BAMB_2503BAMB_1535
AVAR240292 AVA_2828AVA_2828AVA_2830AVA_2830AVA_2828AVA_2828AVA_2829
AORE350688 CLOS_0311CLOS_2429CLOS_2430CLOS_2428CLOS_2810CLOS_0319CLOS_0311CLOS_0310
AMAR329726 AM1_A0162AM1_3414AM1_A0163AM1_A0161AM1_A0161AM1_A0162AM1_3350AM1_A0156
AAUR290340 AAUR_2017AAUR_0558AAUR_0559AAUR_0557AAUR_3763AAUR_3765AAUR_0387AAUR_0560


Organism features enriched in list (features available for 124 out of the 130 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00421732992
Arrangment:Clusters 7.550e-81417
Arrangment:Filaments 0.0070469610
Arrangment:Pairs 4.866e-1151112
Disease:Anthrax 0.001969144
Disease:Botulism 0.000408155
Disease:Bubonic_plague 0.000084066
Disease:Gas_gangrene 0.009438833
Disease:Gastroenteritis 0.0075000713
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.0000248911
Endospores:Yes 9.509e-163753
GC_Content_Range7:60-70 0.006597919134
GC_Content_Range7:70-100 0.0002926811
Genome_Size_Range5:4-6 2.372e-967184
Genome_Size_Range9:4-5 0.00019353496
Genome_Size_Range9:5-6 0.00006853388
Gram_Stain:Gram_Neg 0.000053452333
Gram_Stain:Gram_Pos 4.947e-1263150
Habitat:Aquatic 0.00295701091
Habitat:Host-associated 0.001049830206
Habitat:Multiple 1.145e-660178
Habitat:Terrestrial 0.00038661531
Motility:Yes 0.002254170267
Optimal_temp.:25-35 0.0026941814
Optimal_temp.:30-37 3.142e-61318
Oxygen_Req:Facultative 4.367e-664201
Pathogenic_in:Human 0.000045564213
Pathogenic_in:No 0.003451136226
Shape:Rod 3.919e-695347
Shape:Spiral 0.0022199134
Temp._range:Mesophilic 0.0001295114473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 335
Effective number of orgs (counting one per cluster within 468 clusters): 278

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-21
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TSP28240 Thermotoga sp.1
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB81
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP94122 ncbi Shewanella sp. ANA-31
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SPEA398579 ncbi Shewanella pealeana ATCC 7003451
SONE211586 ncbi Shewanella oneidensis MR-11
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-41
SHAL458817 ncbi Shewanella halifaxensis HAW-EB41
SGOR29390 Streptococcus gordonii Challis0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEG203122 ncbi Saccharophagus degradans 2-400
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB1
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSOL267608 ncbi Ralstonia solanacearum GMI10000
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB51
RPAL316056 ncbi Rhodopseudomonas palustris BisB181
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RPAL258594 ncbi Rhodopseudomonas palustris CGA0091
RMAS416276 ncbi Rickettsia massiliae MTU50
RFER338969 ncbi Rhodoferax ferrireducens T1181
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT264198 ncbi Ralstonia eutropha JMP1341
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSTU379731 ncbi Pseudomonas stutzeri A15011
PSP56811 Psychrobacter sp.1
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPUT351746 ncbi Pseudomonas putida F11
PPUT160488 ncbi Pseudomonas putida KT24401
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PINT246198 Prevotella intermedia 170
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PFLU205922 ncbi Pseudomonas fluorescens Pf0-11
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE51
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM51
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534421
NMEN272831 ncbi Neisseria meningitidis FAM181
NMEN122587 ncbi Neisseria meningitidis Z24911
NMEN122586 ncbi Neisseria meningitidis MC581
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10901
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE264732 ncbi Moorella thermoacetica ATCC 390731
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.0
MSP189918 ncbi Mycobacterium sp. KMS1
MSP164757 ncbi Mycobacterium sp. JLS1
MSP164756 ncbi Mycobacterium sp. MCS1
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPET420662 ncbi Methylibium petroleiphilum PM10
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS101
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MKAN190192 ncbi Methanopyrus kandleri AV190
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
JSP375286 ncbi Janthinobacterium sp. Marseille0
ILOI283942 ncbi Idiomarina loihiensis L2TR1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE1
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DRED349161 ncbi Desulfotomaculum reducens MI-10
DPSY177439 ncbi Desulfotalea psychrophila LSv541
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G201
DARO159087 ncbi Dechloromonas aromatica RCB1
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg1
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CJAP155077 Cellvibrio japonicus1
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29011
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB150
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSP376 Bradyrhizobium sp.0
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BPER257313 ncbi Bordetella pertussis Tohama I1
BPAR257311 ncbi Bordetella parapertussis 128221
BLON206672 ncbi Bifidobacterium longum NCC27050
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1100
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB501
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3450
AAVE397945 ncbi Acidovorax citrulli AAC00-11
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  EG10303   EG10298   EG10296   EG10295   EG10290   EG10289   EG10288   EG10287   
ZMOB264203
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
WSUC273121
WPIP955
WPIP80849
VEIS391735 VEIS_3079
UURE95667
UURE95664
UPAR505682
TVOL273116
TTUR377629
TSP28240 TRQ2_0758
TROS309801
TPET390874 TPET_0734
TPEN368408
TPAL243276
TMAR243274 TM_0190
TERY203124
TELO197221
TDEN326298
TDEN292415
TACI273075
SWOL335541
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391295 SSU05_0647
SSP94122 SHEWANA3_3240
SSP84588
SSP64471
SSP387093
SSP1131
SSOL273057
SSED425104
SPEA398579 SPEA_3381
SONE211586 SO_3674
SMUT210007
SMAR399550
SLOI323850 SHEW_0713
SHAL458817 SHAL_3459
SGOR29390
SELO269084
SDEG203122
SALA317655
SACI56780 SYN_01427
SACI330779
RTYP257363
RSOL267608
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057 RPD_2349
RPAL316056 RPC_4254
RPAL316055 RPE_3487
RPAL258594 RPA0150
RMAS416276
RFER338969 RFER_2621
RFEL315456
REUT264198 REUT_A0655
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438
PSTU379731 PST_3269
PSP56811 PSYCPRWF_1104
PSP312153
PSP117
PRUM264731
PPUT351746 PPUT_4552
PPUT160488 PP_4688
PPEN278197
PNAP365044
PMOB403833
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616 PISL_0227
PINT246198
PGIN242619
PFUR186497 PF0910
PFLU205922 PFL_4799
PDIS435591
PATL342610
PAST100379
PARS340102
PARC259536
PAER178306
PABY272844 PAB0677
OTSU357244
OCAR504832 OCAR_4887
NWIN323098
NSP387092
NSP35761
NSEN222891
NPHA348780 NP3816A
NOCE323261
NMUL323848
NMEN374833 NMCC_0215
NMEN272831 NMC1964
NMEN122587 NMA0452
NMEN122586 NMB_1989
NHAM323097
NGON242231 NGO2092
NEUT335283
NEUR228410
NARO279238
MVAN350058 MVAN_2081
MTUB419947
MTUB336982
MTHE349307 MTHE_0443
MTHE264732 MOTH_1465
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSTA339860
MSP409
MSP189918 MKMS_0280
MSP164757 MJLS_0260
MSP164756 MMCS_0270
MSED399549
MPUL272635
MPNE272634
MPET420662
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221 MMAR10_2512
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MKAN190192
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MFLA265072
MEXT419610
MCAP340047
MCAP243233
MBUR259564 MBUR_1546
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAER449447
MAEO419665
MACE188937 MA2149
MABS561007 MAB_3390
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LMES203120
LLAC272623 L128386
LLAC272622 LACR_0373
LJOH257314
LINT363253
LINT267671
LINT189518
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCHO395495
LCAS321967
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
JSP375286
ILOI283942 IL0114
IHOS453591
HWAL362976
HSOM228400
HSOM205914
HPYL85963
HPYL357544
HPY
HNEP81032
HMOD498761
HINF71421
HINF374930 CGSHIEE_08785
HINF281310
HHEP235279
HDUC233412
HBUT415426
HARS204773
HACI382638
GURA351605
GSUL243231
GOXY290633
GMET269799
GFOR411154
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FRANT
FPHI484022
FNUC190304
FNOD381764
FMAG334413
FJOH376686
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAN269484
DVUL882
DRED349161
DPSY177439 DP0215
DOLE96561
DNOD246195
DDES207559 DDE_3104
DARO159087 DARO_4031
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSP78
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809 CPHY_2393
CPEL335992
CMUR243161
CMET456442 MBOO_0986
CMAQ397948
CKOR374847
CKLU431943
CJEJ407148 C8J_1271
CJEJ360109
CJEJ354242 CJJ81176_1354
CJEJ195099
CJEJ192222 CJ1355
CJAP155077 CJA_3772
CHYD246194 CHY_0397
CHUT269798 CHU_1389
CHOM360107
CFET360106
CFEL264202
CCUR360105 CCV52592_0648
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO291272
CBLO203907
CAULO
CABO218497
BTUR314724
BTHE226186
BSP376
BSP107806
BPER257313 BP0344
BPAR257311 BPP4188
BLON206672
BJAP224911
BHER314723
BGAR290434
BFRA295405
BFRA272559
BCIC186490
BBUR224326
BBRO257310 BB4658
BBAC264462
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AURANTIMONAS
ASP62977
ASP62928
ASP232721
APHA212042
APER272557
AMAR234826
ALAI441768
AFUL224325
AFER243159
ADEH290397
ACRY349163
ACEL351607
ABUT367737
ABAC204669
AAVE397945 AAVE_3323
AAEO224324


Organism features enriched in list (features available for 312 out of the 335 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 6.034e-63092
Arrangment:Filaments 0.0051238110
Arrangment:Pairs 7.235e-933112
Disease:Pharyngitis 0.006449888
Disease:bronchitis_and_pneumonitis 0.006449888
Endospores:Yes 1.387e-9853
GC_Content_Range4:0-40 0.0003140133213
GC_Content_Range4:60-100 0.004144265145
GC_Content_Range7:0-30 0.00681063347
GC_Content_Range7:30-40 0.0089198100166
GC_Content_Range7:50-60 0.007671047107
GC_Content_Range7:70-100 0.0025771111
Genome_Size_Range5:0-2 6.010e-21131155
Genome_Size_Range5:4-6 6.681e-869184
Genome_Size_Range5:6-10 4.392e-7947
Genome_Size_Range9:0-1 8.453e-62527
Genome_Size_Range9:1-2 5.518e-15106128
Genome_Size_Range9:4-5 0.00004663496
Genome_Size_Range9:5-6 0.00184493588
Genome_Size_Range9:6-8 0.0000203838
Gram_Stain:Gram_Neg 0.0000449201333
Gram_Stain:Gram_Pos 8.835e-1540150
Habitat:Aquatic 0.00563755991
Habitat:Host-associated 0.0039871124206
Habitat:Multiple 0.000576378178
Habitat:Terrestrial 0.0009310831
Motility:Yes 0.0020065127267
Optimal_temp.:35-37 0.00308021213
Oxygen_Req:Anaerobic 0.000577969102
Oxygen_Req:Facultative 1.936e-1366201
Oxygen_Req:Microaerophilic 0.00634921518
Pathogenic_in:Human 5.982e-786213
Pathogenic_in:No 0.0009909138226
Shape:Rod 0.0000412163347
Shape:Sphere 0.00076961719
Shape:Spiral 9.572e-63034
Temp._range:Hyperthermophilic 0.00858981823
Temp._range:Mesophilic 0.0017005240473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 14
Effective number of orgs (counting one per cluster within 468 clusters): 13

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CJEI306537 ncbi Corynebacterium jeikeium K411 0.00006486598
CMIC31964 ncbi Clavibacter michiganensis sepedonicus 0.00055578618
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 382 0.00086689108
SSP1148 ncbi Synechocystis sp. PCC 6803 0.00126649548
TDEN243275 ncbi Treponema denticola ATCC 35405 0.00154785947
SAUR273036 ncbi Staphylococcus aureus RF122 0.003479610828
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 15305 0.004179711078
HSP64091 ncbi Halobacterium sp. NRC-1 0.00473614176
CPER289380 ncbi Clostridium perfringens SM101 0.004964711318
AORE350688 ncbi Alkaliphilus oremlandii OhILAs 0.005674911508
HSAL478009 ncbi Halobacterium salinarum R1 0.00615724366
KRAD266940 ncbi Kineococcus radiotolerans SRS30216 0.006296811658
NFAR247156 ncbi Nocardia farcinica IFM 10152 0.007516811918
NSP103690 ncbi Nostoc sp. PCC 7120 0.008763612148


Names of the homologs of the genes in the group in each of these orgs
  EG10303   EG10298   EG10296   EG10295   EG10290   EG10289   EG10288   EG10287   
CJEI306537 JK1294JK1773JK1772JK1818JK1806JK1294JK1816JK1296
CMIC31964 CMS0337CMS3064CMS3065CMS3063CMS3063CMS1571CMS3065CMS3066
CMIC443906 CMM_0167CMM_2929CMM_2930CMM_2928CMM_2928CMM_2350CMM_2930CMM_2349
SSP1148 SLR1316SLR1317SLR1316SLR1318SLR1318SLR1317SLR1316SLR1319
TDEN243275 TDE_1179TDE_2357TDE_2357TDE_0625TDE_2357TDE_2357TDE_1180
SAUR273036 SAB2057CSAB2056CSAB0053CSAB0596SAB0596SAB2056CSAB0597SAB2058C
SSAP342451 SSP2072SSP2071SSP2072SSP2073SSP2073SSP0711SSP0710SSP0709
HSP64091 VNG2560GVNG2560GVNG2558GVNG2558GVNG1370GVNG1370G
CPER289380 CPR_0796CPR_0796CPR_0795CPR_0797CPR_0797CPR_0796CPR_0213CPR_0778
AORE350688 CLOS_0311CLOS_2429CLOS_2430CLOS_2428CLOS_2810CLOS_0319CLOS_0311CLOS_0310
HSAL478009 OE4591ROE4591ROE4587ROE4587ROE2952FOE2952F
KRAD266940 KRAD_1240KRAD_1240KRAD_1241KRAD_1239KRAD_1239KRAD_1240KRAD_1241KRAD_3654
NFAR247156 NFA18240NFA25200NFA25210NFA25190NFA25190NFA18240NFA25210NFA42960
NSP103690 ALL0387ALL2585ALL2586ALL2584ALL2584ALL2585ALL2586ALR2583


Organism features enriched in list (features available for 14 out of the 14 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
GC_Content_Range7:70-100 0.0000613411
Genome_Size_Range5:2-4 0.000605511197
Gram_Stain:Gram_Neg 0.00011301333
Gram_Stain:Gram_Pos 0.00200159150
Optimal_temp.:25-28 0.000536422



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1314 (fructose degradation)2241020.4549
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))121670.4169
PWY-5022 (4-aminobutyrate degradation V)43350.4056
PWY-6344 (ornithine degradation II (Stickland reaction))68460.4030



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10298   EG10296   EG10295   EG10290   EG10289   EG10288   EG10287   
EG103030.9992780.999130.9994150.999410.9993430.9989770.999012
EG102980.9997860.9997860.9996850.9995010.9995760.999084
EG102960.9997480.9996450.9994330.9995710.998981
EG102950.9998450.9993160.9992430.999119
EG102900.9995370.9993960.999247
EG102890.9997160.999184
EG102880.99898
EG10287



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PAIRWISE BLAST SCORES:

  EG10303   EG10298   EG10296   EG10295   EG10290   EG10289   EG10288   EG10287   
EG103030.0f02.4e-37---2.1e-362.6e-34-
EG10298-0.0f0------
EG10296--0.0f0-----
EG10295---0.0f07.3e-55---
EG10290---3.2e-540.0f0---
EG10289-----0.0f0--
EG10288-----2.0e-270.0f0-
EG10287-------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-2001 (ferric dicitrate uptake system) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.500, average score: 0.720)
  Genes in pathway or complex:
             0.9449 0.7384 EG10286 (fecA) EG10286-MONOMER (outer membrane receptor; citrate-dependent iron transport, outer membrane receptor)
             0.4405 0.2289 EG10272 (exbD) EG10272-MONOMER (ExbD uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.3282 0.1053 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.5492 0.2515 EG11012 (tonB) EG11012-MONOMER (TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins)
   *in cand* 0.9996 0.9992 EG10290 (fecE) FECE-MONOMER (FecE)
   *in cand* 0.9994 0.9990 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9995 0.9992 EG10289 (fecD) FECD-MONOMER (FecD)
   *in cand* 0.9992 0.9990 EG10287 (fecB) FECB-MONOMER (FecB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9991 EG10295 (fepC) FEPC-MONOMER (FepC)
   *in cand* 0.9995 0.9990 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9996 0.9991 EG10298 (fepG) FEPG-MONOMER (FepG)
   *in cand* 0.9993 0.9990 EG10303 (fhuB) FHUB-MONOMER (FhuB)

- ABC-9-CPLX (iron dicitrate ABC transporter) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.500, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9992 0.9990 EG10287 (fecB) FECB-MONOMER (FecB)
   *in cand* 0.9995 0.9992 EG10289 (fecD) FECD-MONOMER (FecD)
   *in cand* 0.9994 0.9990 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9996 0.9992 EG10290 (fecE) FECE-MONOMER (FecE)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9991 EG10295 (fepC) FEPC-MONOMER (FepC)
   *in cand* 0.9995 0.9990 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9996 0.9991 EG10298 (fepG) FEPG-MONOMER (FepG)
   *in cand* 0.9993 0.9990 EG10303 (fhuB) FHUB-MONOMER (FhuB)

- CPLX0-1944 (Ferric Enterobactin Transport System) (degree of match pw to cand: 0.375, degree of match cand to pw: 0.375, average score: 0.650)
  Genes in pathway or complex:
             0.4405 0.2289 EG10272 (exbD) EG10272-MONOMER (ExbD uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.3282 0.1053 EG10271 (exbB) EG10271-MONOMER (ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins)
             0.5492 0.2515 EG11012 (tonB) EG11012-MONOMER (TonB protein; energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins)
             0.9631 0.8779 EG10293 (fepA) EG10293-MONOMER (FepA, outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D)
   *in cand* 0.9996 0.9991 EG10295 (fepC) FEPC-MONOMER (FepC)
   *in cand* 0.9995 0.9990 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9996 0.9991 EG10298 (fepG) FEPG-MONOMER (FepG)
             0.9990 0.9975 EG10294 (fepB) FEPB-MONOMER (FepB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9992 0.9990 EG10287 (fecB) FECB-MONOMER (FecB)
   *in cand* 0.9994 0.9990 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9995 0.9992 EG10289 (fecD) FECD-MONOMER (FecD)
   *in cand* 0.9996 0.9992 EG10290 (fecE) FECE-MONOMER (FecE)
   *in cand* 0.9993 0.9990 EG10303 (fhuB) FHUB-MONOMER (FhuB)

- ABC-10-CPLX (ferric enterobactin ABC transporter) (degree of match pw to cand: 0.750, degree of match cand to pw: 0.375, average score: 1.000)
  Genes in pathway or complex:
             0.9990 0.9975 EG10294 (fepB) FEPB-MONOMER (FepB)
   *in cand* 0.9996 0.9991 EG10298 (fepG) FEPG-MONOMER (FepG)
   *in cand* 0.9995 0.9990 EG10296 (fepD) FEPD-MONOMER (FepD)
   *in cand* 0.9996 0.9991 EG10295 (fepC) FEPC-MONOMER (FepC)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9992 0.9990 EG10287 (fecB) FECB-MONOMER (FecB)
   *in cand* 0.9994 0.9990 EG10288 (fecC) FECC-MONOMER (FecC)
   *in cand* 0.9995 0.9992 EG10289 (fecD) FECD-MONOMER (FecD)
   *in cand* 0.9996 0.9992 EG10290 (fecE) FECE-MONOMER (FecE)
   *in cand* 0.9993 0.9990 EG10303 (fhuB) FHUB-MONOMER (FhuB)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10287 EG10288 EG10289 EG10290 (centered at EG10288)
EG10303 (centered at EG10303)
EG10295 EG10296 EG10298 (centered at EG10298)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG10303   EG10298   EG10296   EG10295   EG10290   EG10289   EG10288   EG10287   
201/623187/623213/623223/623227/623205/623237/623205/623
AAUR290340:2:Tyes1590167168166330133030169
AAVE397945:0:Tyes------0-
ABAU360910:0:Tyes----0-484-
ABOR393595:0:Tyes0-----0-
ACAU438753:0:Tyes31032100-1-
AEHR187272:0:Tyes0-0--00-
AHYD196024:0:Tyes2203-4-2--0
AMAR329726:8:Tyes6-7556-0
AMAR329726:9:Tyes-64----0-
AMET293826:0:Tyes---00---
ANAE240017:0:Tyes-0118811903--2
AORE350688:0:Tyes12187218821862567910
APLE416269:0:Tyes1342------0
APLE434271:0:Tno1399------0
ASAL382245:5:Tyes2431-422-14250
ASP1667:3:Tyes-120022-
ASP76114:2:Tyes0-0--00-
AVAR240292:3:Tyes00-22001
BABO262698:0:Tno----0--70
BABO262698:1:Tno--0--0--
BAMB339670:3:Tno1162-0019943
BAMB398577:3:Tno11-0018313
BAMY326423:0:Tyes19901990199119541989199019910
BANT260799:0:Tno38381024660466101526
BANT261594:2:Tno38131024624462501499
BANT568206:2:Tyes23811583158415823217321815840
BANT592021:2:Tno40161024854485501575
BBAC360095:0:Tyes--0--0-601
BBRO257310:0:Tyes------0-
BCAN483179:0:Tno-------0
BCAN483179:1:Tno--0--0--
BCEN331271:2:Tno1--0016933
BCEN331272:3:Tyes1--0018183
BCER226900:1:Tyes00279314661466246631563
BCER288681:0:Tno11024568456901520
BCER315749:1:Tyes14401440144114391439144014410
BCER405917:1:Tyes11024575457601515
BCER572264:1:Tno39141024773477401644
BCLA66692:0:Tyes26971022123741916
BHAL272558:0:Tyes02770277114344452772
BHEN283166:0:Tyes--0--0--
BLIC279010:0:Tyes23292228422822328210
BMAL243160:1:Tno22-33-7490
BMAL320388:1:Tno734--735735-0732
BMAL320389:1:Tyes1--00-10053
BMEL224914:0:Tno-------0
BMEL224914:1:Tno--0--0--
BMEL359391:0:Tno-------0
BMEL359391:1:Tno--0--0--
BOVI236:0:Tyes-------0
BOVI236:1:Tyes--0--0--
BPAR257311:0:Tno------0-
BPER257313:0:Tyes------0-
BPET94624:0:Tyes0-----274-
BPSE272560:1:Tyes2--33-9610
BPSE320372:1:Tno1--00-11273
BPSE320373:1:Tno1--00-11743
BPUM315750:0:Tyes81082398081702
BQUI283165:0:Tyes--0--00543
BSP36773:2:Tyes1--00110253
BSUB:0:Tyes3355071833173354625626627
BSUI204722:0:Tyes-------0
BSUI204722:1:Tyes--0--0--
BSUI470137:0:Tno-------0
BSUI470137:1:Tno--0--0--
BTHA271848:1:Tno985--986986-0983
BTHU281309:1:Tno37071024498449901494
BTHU412694:1:Tno34051024158415901406
BTRI382640:1:Tyes--0--0-889
BVIE269482:7:Tyes1--0019503
BWEI315730:4:Tyes37481024577457801532
BXEN266265:1:Tyes22-332-0
CACE272562:1:Tyes0-13301-
CBEI290402:0:Tyes-1572157315710---
CBOT36826:1:Tno037437322374373372
CBOT441770:0:Tyes036136022361360359
CBOT441771:0:Tno036236122362361360
CBOT441772:1:Tno036136022361360359
CBOT498213:1:Tno035635522356356354
CBOT508765:1:Tyes112001-3
CBOT515621:2:Tyes038146022381460459
CBOT536232:0:Tno-40740600407406405
CCUR360105:0:Tyes-------0
CDES477974:0:Tyes-00--00-
CDIF272563:1:Tyes112001--
CDIP257309:0:Tyes-4694704684680-471
CEFF196164:0:Fyes-1200102-
CGLU196627:0:Tyes-12001691612568
CHUT269798:0:Tyes0-------
CHYD246194:0:Tyes-------0
CJAP155077:0:Tyes------0-
CJEI306537:0:Tyes049048953552305332
CJEJ192222:0:Tyes-------0
CJEJ354242:2:Tyes-------0
CJEJ407148:0:Tno-------0
CMET456442:0:Tyes------0-
CMIC31964:2:Tyes02603260426022602119526042605
CMIC443906:2:Tyes02821282228202820223028222229
CNOV386415:0:Tyes0001100-
CPER195102:1:Tyes202019212120-0
CPER195103:0:Tno5845845835855855840-
CPER289380:3:Tyes5705705695715715700552
CPHY357809:0:Tyes0-------
CSAL290398:0:Tyes80116911691012
CSP501479:7:Fyes-------0
CSP501479:8:Fyes-21420223812142-
CTET212717:0:Tyes0001100-
CVIO243365:0:Tyes2386856866846842380-
DARO159087:0:Tyes------0-
DDES207559:0:Tyes------0-
DETH243164:0:Tyes--0---0-
DGEO319795:0:Tyes1-300132
DHAF138119:0:Tyes29061022603260411082599
DPSY177439:2:Tyes------0-
DRAD243230:1:Tyes9409593939495-
DSHI398580:5:Tyes--10--100-
DSP216389:0:Tyes--0--00-
DSP255470:0:Tno--0--00-
ECAR218491:0:Tyes22551740174117390123
ECOL199310:0:Tno046947046846835054040472
ECOL316407:0:Tno04314324304116411741184119
ECOL331111:6:Tno04274284264506450745084509
ECOL362663:0:Tno045345445245229523435456
ECOL364106:1:Tno041942041841832853854422
ECOL405955:2:Tyes038138238038029623415384
ECOL409438:6:Tyes0511512510510--514
ECOL413997:0:Tno04064074054041404240434044
ECOL439855:4:Tno042943042842830513525432
ECOL469008:0:Tno403102682681680679
ECOL481805:0:Tno27802328232723290123
ECOL585034:0:Tno0414415413413--417
ECOL585035:0:Tno04524534514526452745284529
ECOL585055:0:Tno04294304284735473747384739
ECOL585056:2:Tno05305315294690469246934694
ECOL585057:0:Tno04034044024614461546164617
ECOL585397:0:Tno04014024004836483848394840
ECOL83334:0:Tno048148248048038474329484
ECOLI:0:Tno04444454434210421142124213
ECOO157:0:Tno047847947747738554347481
EFAE226185:3:Tyes2210-1--
EFER585054:1:Tyes02310230923112311--2307
ESP42895:1:Tyes042943042842810602773432
FALN326424:0:Tyes-0111021102-1-
FSP106370:0:Tyes0-----0-
FSP1855:0:Tyes-0285011--2842
GKAU235909:1:Tyes11022114601461
GTHE420246:1:Tyes11301130112911310113011291128
GVIO251221:0:Tyes-0---00-
HAUR316274:2:Tyes1102213644
HCHE349521:0:Tyes02292229122932293197119701969
HHAL349124:0:Tyes--0--575--
HINF374930:0:Tyes0-------
HMAR272569:7:Tyes00-11---
HMAR272569:8:Tyes-----0--
HMUK485914:1:Tyes11-00---
HSAL478009:4:Tyes963963-96296200-
HSP64091:2:Tno939939-93893800-
ILOI283942:0:Tyes--0-----
JSP290400:1:Tyes2213-131270
KPNE272620:2:Tyes19832541254225402540002544
KRAD266940:2:Fyes11022102133
LINN272626:1:Tno0474133474--
LLAC272622:5:Tyes0-------
LLAC272623:0:Tyes0-------
LMON169963:0:Tno-496022496--
LMON265669:0:Tyes-409022409--
LPLA220668:0:Tyes-210022-
LSAK314315:0:Tyes2-1-021-
LSPH444177:1:Tyes667667066866811666
LWEL386043:0:Tyes-393022393--
LXYL281090:0:Tyes11100---
MABS561007:1:Tyes-------0
MACE188937:0:Tyes--0-----
MAQU351348:2:Tyes18882988298729892989029871887
MBUR259564:0:Tyes------0-
MGIL350054:3:Tyes--0---0399
MJAN243232:2:Tyes00------
MLAB410358:0:Tyes----85-0-
MLOT266835:2:Tyes000---0-
MMAR394221:0:Tyes0-------
MSME246196:0:Tyes-102259985998421
MSP164756:1:Tno-------0
MSP164757:0:Tno-------0
MSP189918:2:Tyes-------0
MSP266779:3:Tyes21321133132113210
MSP400668:0:Tyes540032183220224225226227
MSUC221988:0:Tyes420------0
MTHE264732:0:Tyes0-------
MTHE349307:0:Tyes-0------
MVAN350058:0:Tyes-------0
MXAN246197:0:Tyes------6150
NFAR247156:2:Tyes070270370170107032491
NGON242231:0:Tyes-------0
NMEN122586:0:Tno-------0
NMEN122587:0:Tyes-------0
NMEN272831:0:Tno-------0
NMEN374833:0:Tno-------0
NPHA348780:2:Tyes-----0--
NSP103690:6:Tyes02217221822162216221722182215
OANT439375:4:Tyes01298481301130148481016
OCAR504832:0:Tyes0-------
OIHE221109:0:Tyes192102190193192283
PABY272844:0:Tyes-----0--
PACN267747:0:Tyes344257344--00-
PAER208963:0:Tyes-013311-
PAER208964:0:Tno-320022-
PCAR338963:0:Tyes-00---0-
PCRY335284:1:Tyes22-33210
PENT384676:0:Tyes------5300
PFLU205922:0:Tyes------0-
PFLU216595:1:Tyes2--00123
PFLU220664:0:Tyes-320022-
PFUR186497:0:Tyes0-------
PHAL326442:1:Tyes0-----0-
PHOR70601:0:Tyes-0---0--
PING357804:0:Tyes-0---0--
PISL384616:0:Tyes-------0
PLUM243265:0:Fyes121831853210
PMEN399739:0:Tyes913172517250-617255
PMUL272843:1:Tyes11-00123
PPRO298386:1:Tyes--200--3
PPRO298386:2:Tyes0-----540-
PPUT160488:0:Tno------0-
PPUT351746:0:Tyes------0-
PPUT76869:0:Tno-320022902-
PSP296591:2:Tyes11-00123
PSP56811:2:Tyes0-------
PSTU379731:0:Tyes------0-
PSYR205918:0:Tyes-1930192919310123
PSYR223283:2:Tyes---00123
RCAS383372:0:Tyes-0---00-
RDEN375451:4:Tyes-666----0-
RETL347834:3:Tyes----0---
RETL347834:4:Tyes0-------
RETL347834:5:Tyes-583583--5835830
REUT264198:3:Tyes------0-
REUT381666:2:Tyes-----00-
RFER338969:1:Tyes-------0
RLEG216596:3:Tyes0-------
RLEG216596:6:Tyes-645645--0645-
RMET266264:1:Tyes-0------
RMET266264:2:Tyes-----00-
RPAL258594:0:Tyes------0-
RPAL316055:0:Tyes------0-
RPAL316056:0:Tyes--0-----
RPAL316057:0:Tyes-----0--
RRUB269796:1:Tyes-----00-
RSAL288705:0:Tyes3811666211810-23
RSP101510:3:Fyes-3788378937873787-27620
RSP357808:0:Tyes-0---00-
RSPH272943:3:Tyes-3263273253253273270
RSPH272943:4:Tyes0-------
RSPH349101:1:Tno-120022750
RSPH349101:2:Tno0-------
RSPH349102:2:Tyes-------0
RSPH349102:4:Tyes-1022-0-
RSPH349102:5:Tyes-----0--
RXYL266117:0:Tyes22133210
SACI56780:0:Tyes0-------
SAGA205921:0:Tno---00---
SAGA208435:0:Tno---00---
SAGA211110:0:Tyes---00---
SARE391037:0:Tyes-1022-17161717
SAUR158878:1:Tno2135-055055021345512136
SAUR158879:1:Tno2015-052552520145262016
SAUR196620:0:Tno2093-054254220925432094
SAUR273036:0:Tno20042003053153120035322005
SAUR282458:0:Tno539-05385382133539870
SAUR282459:0:Tno2067-054954920665502068
SAUR359786:1:Tno2158-058558521575862159
SAUR359787:1:Tno2106-057557521055762107
SAUR367830:3:Tno1938-050350319375041939
SAUR418127:0:Tyes2123-054854821225492124
SAUR426430:0:Tno2090-057457420895752091
SAUR93061:0:Fno2285-054754722845482286
SAUR93062:1:Tno2019-059359320185942020
SAVE227882:1:Fyes0596759665968596859675966-
SBAL399599:3:Tyes-----002494
SBAL402882:1:Tno-----0-2389
SBOY300268:1:Tyes0288289287287--291
SCO:2:Fyes694412961297129504964966945
SDEN318161:0:Tyes340340----0-
SDYS300267:1:Tyes0331332330386538663867334
SENT209261:0:Tno01973197219741974--1970
SENT220341:0:Tno0366367365365--369
SENT295319:0:Tno01860185918611861--1857
SENT321314:2:Tno0436437435435--439
SENT454169:2:Tno0460461459459--463
SEPI176279:1:Tyes---00143914401441
SEPI176280:0:Tno---00140214031404
SERY405948:0:Tyes-102239140863
SFLE198214:0:Tyes0355356354354--358
SFLE373384:0:Tno0377378376376--380
SFUM335543:0:Tyes-----16220-
SGLO343509:2:Tyes11200--3
SGLO343509:3:Tyes------0-
SHAE279808:0:Tyes1431-143114321432214310
SHAL458817:0:Tyes0-------
SHIGELLA:0:Tno0344345343343--347
SLAC55218:1:Fyes-1022-0-
SLOI323850:0:Tyes0-------
SMED366394:2:Tyes-----00-
SMED366394:3:Tyes22133--0
SMEL266834:0:Tyes-1200-2-
SMEL266834:2:Tyes-----0--
SONE211586:1:Tyes-----0--
SPEA398579:0:Tno0-------
SPNE1313:0:Tyes--022---
SPNE170187:0:Tyes--033---
SPNE171101:0:Tno--033---
SPNE487213:0:Tno--022---
SPNE487214:0:Tno--022---
SPNE488221:0:Tno--022---
SPRO399741:1:Tyes1833127612751277127700-
SPYO160490:0:Tno---00-1117-
SPYO186103:0:Tno---00-1200-
SPYO193567:0:Tno---12841284-0-
SPYO198466:0:Tno---00-1276-
SPYO286636:0:Tno---00-1187-
SPYO293653:0:Tno---00-1209-
SPYO319701:0:Tyes---00-1210-
SPYO370551:0:Tno---00-1221-
SPYO370552:0:Tno---00-1290-
SPYO370553:0:Tno---00-1227-
SPYO370554:0:Tyes---00-1282-
SRUB309807:1:Tyes-14741474--01474-
SSAP342451:2:Tyes14121411141214131413210
SSON300269:1:Tyes03563573554068406940704071
SSP1148:0:Tyes01022103
SSP292414:2:Tyes-0----2632-
SSP321327:0:Tyes-1-0011-
SSP321332:0:Tyes-1-0011-
SSP644076:3:Fyes-1012412400-
SSP94122:1:Tyes-----0--
SSUI391295:0:Tyes--0-----
SSUI391296:0:Tyes--0-3---
STHE292459:0:Tyes-120022324
STRO369723:0:Tyes-9099089100-22441
STYP99287:1:Tyes0394395393393--397
TCRU317025:0:Tyes-0----0-
TDEN243275:0:Tyes548171817180-17181718549
TFUS269800:0:Tyes-12002075-1536
TKOD69014:0:Tyes00---0--
TLET416591:0:Tyes11-001-2
TMAR243274:0:Tyes-0------
TPET390874:0:Tno-0------
TPSE340099:0:Tyes-01224-----
TSP1755:0:Tyes-0780-----
TSP28240:0:Tyes-0------
TTEN273068:0:Tyes143014300-----
TTHE262724:0:Tyes-----330
TTHE300852:1:Tyes------0-
TTHE300852:2:Tyes-------0
TWHI203267:0:Tyes-1200---
TWHI218496:0:Tno-1200---
UMET351160:0:Tyes0-0--00-
VCHO:0:Tyes0613612614614---
VCHO:1:Fyes-------0
VCHO345073:0:Tno-------0
VCHO345073:1:Tno22011022---
VEIS391735:1:Tyes------0-
VFIS312309:1:Tyes2--00814-624
VFIS312309:2:Tyes------0-
VPAR223926:0:Tyes0215-214214215216217
VVUL196600:1:Tyes1094--10921092-01093
VVUL216895:0:Tno2---0-5541
XAUT78245:1:Tyes0----14161416-
YENT393305:1:Tyes386318831873189318900-
YPES187410:5:Tno263-210221042104003528
YPES214092:3:Tno2978-121312111211003615
YPES349746:2:Tno340-247724792479003413
YPES360102:3:Tyes2091-200322332233334
YPES377628:2:Tno0-177617781778274027403026
YPES386656:2:Tno1537-022227622762355
YPSE273123:2:Tno410-123412321232003542
YPSE349747:2:Tno877-022134913491627



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