CANDIDATE ID: 244

CANDIDATE ID: 244

NUMBER OF GENES: 8
AVERAGE SCORE:    9.9944500e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    6.2500000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G7910 (yjhG) (b4297)
   Products of gene:
     - G7910-MONOMER (KpLE2 phage-like element; predicted dehydratase)

- G6141 (yagF) (b0269)
   Products of gene:
     - G6141-MONOMER (CP4-6 prophage; predicted dehydratase)

- EG11583 (gcl) (b0507)
   Products of gene:
     - GLYOCARBOLIG-MONOMER (Gcl)
     - GLYOCARBOLIG-CPLX (glyoxylate carboligase)
       Reactions:
        2 glyoxylate + H+  ->  CO2 + tartronate semialdehyde
         In pathways
         GLYCOL-GLYOXDEG-PWY (superpathway of glycol metabolism and degradation)
         GLYCOLATEMET-PWY (glycolate and glyoxylate degradation I)

- EG10500 (ilvI) (b0077)
   Products of gene:
     - ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
     - ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase)
       Reactions:
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)

- EG10499 (ilvH) (brnP)
   Products of gene:
     - ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
     - ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase)
       Reactions:
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)

- EG10496 (ilvD) (b3771)
   Products of gene:
     - DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
     - DIHYDROXYACIDDEHYDRAT-CPLX (dihydroxy acid dehydratase)
       Reactions:
        2,3-dihydroxy-isovalerate  ->  2-oxoisovalerate + H2O
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         VALSYN-PWY (valine biosynthesis)
        2,3-dihydroxy-3-methylvalerate  ->  2-keto-3-methyl-valerate + H2O
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)

- EG10494 (ilvB) (b3671)
   Products of gene:
     - LARGEILVB-MONOMER (IlvB)
     - ACETOLACTSYNI-CPLX (acetohydroxybutanoate synthase / acetolactate synthase)
       Reactions:
        pyruvate + 2-oxobutanoate + H+  ->  2-aceto-2-hydroxy-butanoate + CO2
         In pathways
         PWY-3001 (PWY-3001)
         THREOCAT-PWY (superpathway of threonine metabolism)
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))
         PWY-5103 (PWY-5103)
         PWY-5104 (PWY-5104)
         PWY-5101 (PWY-5101)
        2 pyruvate + H+  =  (S)-2-acetolactate + CO2
         In pathways
         BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)
         PWY-6396 (PWY-6396)
         VALSYN-PWY (valine biosynthesis)
         PWY-5939 (PWY-5939)
         PWY-5938 (PWY-5938)
         PWY-6389 (PWY-6389)

- EG10257 (edd) (b1851)
   Products of gene:
     - PGLUCONDEHYDRAT-MONOMER (phosphogluconate dehydratase)
       Reactions:
        6-phospho-D-gluconate  ->  2-dehydro-3-deoxy-D-gluconate-6-phosphate + H2O
         In pathways
         GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)
         ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)



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ORGANISMS CONTAINING AT LEAST 7 GENES FROM THE GROUP:

Total number of orgs: 223
Effective number of orgs (counting one per cluster within 468 clusters): 190

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM47
XAUT78245 ncbi Xanthobacter autotrophicus Py28
WSUC273121 ncbi Wolinella succinogenes DSM 17408
VVUL196600 ncbi Vibrio vulnificus YJ0168
UMET351160 ncbi uncultured methanogenic archaeon RC-I8
TTHE300852 ncbi Thermus thermophilus HB87
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB47
TSP1755 Thermoanaerobacter sp.8
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332237
TERY203124 ncbi Trichodesmium erythraeum IMS1018
TELO197221 ncbi Thermosynechococcus elongatus BP-17
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen8
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT28
STHE322159 ncbi Streptococcus thermophilus LMD-97
STHE299768 ncbi Streptococcus thermophilus CNRZ10667
STHE292459 ncbi Symbiobacterium thermophilum IAM 148638
STHE264199 ncbi Streptococcus thermophilus LMG 183117
SSUI391296 ncbi Streptococcus suis 98HAH337
SSP94122 ncbi Shewanella sp. ANA-37
SSP84588 ncbi Synechococcus sp. WH 81027
SSP64471 ncbi Synechococcus sp. CC93118
SSP644076 Silicibacter sp. TrichCH4B7
SSP387093 ncbi Sulfurovum sp. NBC37-18
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)8
SSP321327 ncbi Synechococcus sp. JA-3-3Ab8
SSP292414 ncbi Ruegeria sp. TM10407
SSP1148 ncbi Synechocystis sp. PCC 68038
SSP1131 Synechococcus sp. CC96057
SPRO399741 ncbi Serratia proteamaculans 5688
SPEA398579 ncbi Shewanella pealeana ATCC 7003457
SONE211586 ncbi Shewanella oneidensis MR-17
SMUT210007 ncbi Streptococcus mutans UA1597
SMEL266834 ncbi Sinorhizobium meliloti 10218
SMED366394 ncbi Sinorhizobium medicae WSM4198
SLOI323850 ncbi Shewanella loihica PV-47
SLAC55218 Ruegeria lacuscaerulensis7
SHAL458817 ncbi Shewanella halifaxensis HAW-EB48
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB8
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23388
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4768
SCO ncbi Streptomyces coelicolor A3(2)7
SBAL402882 ncbi Shewanella baltica OS1858
SBAL399599 ncbi Shewanella baltica OS1958
SARE391037 ncbi Salinispora arenicola CNS-2057
SACI56780 ncbi Syntrophus aciditrophicus SB7
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170297
RSP101510 ncbi Rhodococcus jostii RHA18
RPOM246200 ncbi Ruegeria pomeroyi DSS-37
RPAL316057 ncbi Rhodopseudomonas palustris BisB57
RPAL316056 ncbi Rhodopseudomonas palustris BisB187
RPAL258594 ncbi Rhodopseudomonas palustris CGA0097
RMET266264 ncbi Ralstonia metallidurans CH347
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38418
REUT381666 ncbi Ralstonia eutropha H167
REUT264198 ncbi Ralstonia eutropha JMP1347
RETL347834 ncbi Rhizobium etli CFN 428
PTHE370438 ncbi Pelotomaculum thermopropionicum SI8
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30007
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a7
PSTU379731 ncbi Pseudomonas stutzeri A15017
PSP296591 ncbi Polaromonas sp. JS6667
PPUT351746 ncbi Pseudomonas putida F17
PMOB403833 ncbi Petrotoga mobilis SJ958
PMAR93060 ncbi Prochlorococcus marinus MIT 92157
PMAR74547 ncbi Prochlorococcus marinus MIT 93137
PMAR74546 ncbi Prochlorococcus marinus MIT 93127
PMAR59920 ncbi Prochlorococcus marinus NATL2A8
PMAR167555 ncbi Prochlorococcus marinus NATL1A8
PMAR167546 ncbi Prochlorococcus marinus MIT 93017
PMAR167542 ncbi Prochlorococcus marinus MIT 95157
PMAR167540 Prochlorococcus marinus pastoris MED4ax7
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13758
PMAR146891 ncbi Prochlorococcus marinus AS96017
PLUT319225 ncbi Chlorobium luteolum DSM 2737
PING357804 ncbi Psychromonas ingrahamii 378
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1257
PFLU216595 ncbi Pseudomonas fluorescens SBW257
PFLU205922 ncbi Pseudomonas fluorescens Pf0-18
PCAR338963 ncbi Pelobacter carbinolicus DSM 23807
PAER208964 ncbi Pseudomonas aeruginosa PAO17
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA147
OIHE221109 ncbi Oceanobacillus iheyensis HTE8317
OCAR504832 ncbi Oligotropha carboxidovorans OM57
OANT439375 ncbi Ochrobactrum anthropi ATCC 491887
NSP387092 ncbi Nitratiruptor sp. SB155-28
NSP35761 Nocardioides sp.7
NSP103690 ncbi Nostoc sp. PCC 71208
NFAR247156 ncbi Nocardia farcinica IFM 101528
NEUT335283 ncbi Nitrosomonas eutropha C917
NEUR228410 ncbi Nitrosomonas europaea ATCC 197187
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124447
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-18
MTUB336982 ncbi Mycobacterium tuberculosis F117
MTHE349307 ncbi Methanosaeta thermophila PT7
MTHE264732 ncbi Moorella thermoacetica ATCC 390738
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H7
MTBRV ncbi Mycobacterium tuberculosis H37Rv7
MTBCDC ncbi Mycobacterium tuberculosis CDC15517
MSP266779 ncbi Chelativorans sp. BNC18
MSP189918 ncbi Mycobacterium sp. KMS7
MSP164757 ncbi Mycobacterium sp. JLS7
MSP164756 ncbi Mycobacterium sp. MCS7
MSME246196 ncbi Mycobacterium smegmatis MC2 1558
MMAZ192952 ncbi Methanosarcina mazei Go18
MMAR444158 ncbi Methanococcus maripaludis C67
MMAR402880 ncbi Methanococcus maripaludis C57
MMAR368407 ncbi Methanoculleus marisnigri JR17
MMAR267377 ncbi Methanococcus maripaludis S27
MLOT266835 ncbi Mesorhizobium loti MAFF3030998
MLAB410358 ncbi Methanocorpusculum labreanum Z7
MKAN190192 ncbi Methanopyrus kandleri AV197
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26618
MHUN323259 ncbi Methanospirillum hungatei JF-17
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK8
MEXT419610 ncbi Methylobacterium extorquens PA17
MCAP243233 ncbi Methylococcus capsulatus Bath8
MBUR259564 ncbi Methanococcoides burtonii DSM 62428
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P27
MBOV233413 ncbi Mycobacterium bovis AF2122/977
MBAR269797 ncbi Methanosarcina barkeri Fusaro7
MAQU351348 ncbi Marinobacter aquaeolei VT88
MAER449447 ncbi Microcystis aeruginosa NIES-8438
MAEO419665 ncbi Methanococcus aeolicus Nankai-38
MACE188937 ncbi Methanosarcina acetivorans C2A8
MABS561007 ncbi Mycobacterium abscessus ATCC 199778
LXYL281090 ncbi Leifsonia xyli xyli CTCB077
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53347
LSPH444177 ncbi Lysinibacillus sphaericus C3-418
LMON265669 ncbi Listeria monocytogenes 4b F23657
LMON169963 ncbi Listeria monocytogenes EGD-e7
LINN272626 ncbi Listeria innocua Clip112627
LCHO395495 ncbi Leptothrix cholodnii SP-67
KRAD266940 ncbi Kineococcus radiotolerans SRS302167
HMOD498761 ncbi Heliobacterium modesticaldum Ice18
HHEP235279 ncbi Helicobacter hepaticus ATCC 514497
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237797
HARS204773 ncbi Herminiimonas arsenicoxydans7
GVIO251221 ncbi Gloeobacter violaceus PCC 74217
GURA351605 ncbi Geobacter uraniireducens Rf47
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-28
GSUL243231 ncbi Geobacter sulfurreducens PCA8
GMET269799 ncbi Geobacter metallireducens GS-158
GKAU235909 ncbi Geobacillus kaustophilus HTA4268
FSP1855 Frankia sp. EAN1pec7
ESP42895 Enterobacter sp.8
ECOL585056 ncbi Escherichia coli UMN0268
ECOL585035 ncbi Escherichia coli S888
ECOL316407 ncbi Escherichia coli K-12 substr. W31108
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough7
DSP255470 ncbi Dehalococcoides sp. CBDB18
DSP216389 ncbi Dehalococcoides sp. BAV18
DRED349161 ncbi Desulfotomaculum reducens MI-18
DOLE96561 ncbi Desulfococcus oleovorans Hxd37
DHAF138119 ncbi Desulfitobacterium hafniense Y518
DETH243164 ncbi Dehalococcoides ethenogenes 1958
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G208
CTEP194439 ncbi Chlorobium tepidum TLS8
CSP501479 Citreicella sp. SE458
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)7
CPSY167879 ncbi Colwellia psychrerythraea 34H7
CPHY357809 ncbi Clostridium phytofermentans ISDg7
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3828
CMIC31964 ncbi Clavibacter michiganensis sepedonicus8
CMET456442 ncbi Candidatus Methanoregula boonei 6A88
CKLU431943 ncbi Clostridium kluyveri DSM 5557
CJEJ407148 ncbi Campylobacter jejuni jejuni 811167
CJEJ360109 ncbi Campylobacter jejuni doylei 269.977
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1767
CJEJ195099 ncbi Campylobacter jejuni RM12217
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111687
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29018
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3818
CEFF196164 ncbi Corynebacterium efficiens YS-3147
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C8
CCUR360105 ncbi Campylobacter curvus 525.927
CCHL340177 ncbi Chlorobium chlorochromatii CaD38
BWEI315730 ncbi Bacillus weihenstephanensis KBAB48
BVIE269482 ncbi Burkholderia vietnamiensis G47
BTHU412694 ncbi Bacillus thuringiensis Al Hakam8
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-278
BSUB ncbi Bacillus subtilis subtilis 1688
BSP376 Bradyrhizobium sp.7
BSP36773 Burkholderia sp.7
BPUM315750 ncbi Bacillus pumilus SAFR-0328
BPET94624 Bordetella petrii7
BPAR257311 ncbi Bordetella parapertussis 128227
BOVI236 Brucella ovis7
BMEL359391 ncbi Brucella melitensis biovar Abortus 23087
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M7
BLIC279010 ncbi Bacillus licheniformis ATCC 145808
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1107
BCLA66692 ncbi Bacillus clausii KSM-K168
BCER572264 ncbi Bacillus cereus 03BB1028
BCER405917 Bacillus cereus W8
BCER315749 ncbi Bacillus cytotoxicus NVH 391-988
BCER288681 ncbi Bacillus cereus E33L8
BCER226900 ncbi Bacillus cereus ATCC 145798
BCEN331272 ncbi Burkholderia cenocepacia HI24247
BCEN331271 ncbi Burkholderia cenocepacia AU 10547
BCAN483179 ncbi Brucella canis ATCC 233657
BBRO257310 ncbi Bordetella bronchiseptica RB507
BANT592021 ncbi Bacillus anthracis A02488
BANT568206 ncbi Bacillus anthracis CDC 6848
BANT261594 ncbi Bacillus anthracis Ames Ancestor8
BANT260799 ncbi Bacillus anthracis Sterne8
BAMY326423 ncbi Bacillus amyloliquefaciens FZB428
BAMB398577 ncbi Burkholderia ambifaria MC40-67
BAMB339670 ncbi Burkholderia ambifaria AMMD7
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9417
AVAR240292 ncbi Anabaena variabilis ATCC 294138
ASP76114 ncbi Aromatoleum aromaticum EbN17
ASP1667 Arthrobacter sp.7
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4497
AMET293826 ncbi Alkaliphilus metalliredigens QYMF7
AMAR329726 ncbi Acaryochloris marina MBIC110177
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43048
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232707
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C8
ACEL351607 ncbi Acidothermus cellulolyticus 11B7
ACAU438753 ncbi Azorhizobium caulinodans ORS 5717
ABOR393595 ncbi Alcanivorax borkumensis SK27
AAUR290340 ncbi Arthrobacter aurescens TC17
AAEO224324 ncbi Aquifex aeolicus VF58


Names of the homologs of the genes in the group in each of these orgs
  G7910   G6141   EG11583   EG10500   EG10499   EG10496   EG10494   EG10257   
ZMOB264203 ZMO0368ZMO0368ZMO1139ZMO1140ZMO1792ZMO1139ZMO0368
XAUT78245 XAUT_1022XAUT_1022XAUT_2367XAUT_1488XAUT_1489XAUT_0070XAUT_1488XAUT_1698
WSUC273121 WS0130WS0130WS0103WS0103WS0102WS0130WS0103WS0130
VVUL196600 VVA1581VVA1581VV0495VV0495VV0496VV3243VV3240VV0059
UMET351160 RCIX238RCIX238LRC534LRC534LRC533RCIX1841LRC534RCIX1841
TTHE300852 TTHA1234TTHA1234TTHA1213TTHA1213TTHA1212TTHA1213TTHA1234
TTEN273068 TTE0020TTE0020TTE0021TTE0014TTE0020TTE0021TTE0020
TSP1755 TETH514_0018TETH514_0018TETH514_0019TETH514_0019TETH514_0012TETH514_0018TETH514_0019TETH514_0018
TPSE340099 TETH39_0019TETH39_0019TETH39_0020TETH39_0013TETH39_0019TETH39_0020TETH39_0019
TERY203124 TERY_0019TERY_0019TERY_2843TERY_2843TERY_1850TERY_0019TERY_2843TERY_0019
TELO197221 TLL1057TLL1057TLR1296TLR1296TLL0880TLL1057TLR1296
SWOL335541 SWOL_2147SWOL_2147SWOL_2146SWOL_2146SWOL_2145SWOL_2147SWOL_2146SWOL_2147
STYP99287 STM3531STM3531STM0517STM0116STM0117STM3904STM3901STM1885
STHE322159 STER_1566STER_1851STER_1850STER_1850STER_1849STER_1851STER_1851
STHE299768 STR1604STR1874STR1873STR1873STR1872STR1874STR1604
STHE292459 STH2685STH2685STH2684STH2684STH2689STH2685STH2684STH2685
STHE264199 STU1604STU1874STU1873STU1873STU1872STU1874STU1604
SSUI391296 SSU98_1894SSU98_1894SSU98_1891SSU98_1891SSU98_1890SSU98_1891SSU98_1894
SSP94122 SHEWANA3_0358SHEWANA3_2269SHEWANA3_2269SHEWANA3_2270SHEWANA3_0358SHEWANA3_0356SHEWANA3_2149
SSP84588 SYNW1123OR3467SYNW1123OR3467SYNW1746OR2980SYNW0680OR1970SYNW1123OR3467SYNW1746OR2980SYNW1123OR3467
SSP64471 GSYN1809GSYN1809GSYN2129GSYN2129GSYN0962GSYN1809GSYN2129GSYN1809
SSP644076 SCH4B_3691SCH4B_3691SCH4B_4254SCH4B_4253SCH4B_2654SCH4B_4254SCH4B_1212
SSP387093 SUN_2427SUN_2427SUN_1823SUN_1823SUN_1822SUN_2427SUN_1823SUN_2427
SSP321332 CYB_1987CYB_1987CYB_0648CYB_0648CYB_0971CYB_1987CYB_0648CYB_1987
SSP321327 CYA_1697CYA_1697CYA_2073CYA_2073CYA_2130CYA_1697CYA_2073CYA_1697
SSP292414 TM1040_2486TM1040_0376TM1040_0875TM1040_0874TM1040_2486TM1040_0875TM1040_0376
SSP1148 SLR0452SLR0452SLR2088SLR2088SLL0065SLR0452SLR2088SLR0452
SSP1131 SYNCC9605_1260SYNCC9605_1260SYNCC9605_0717SYNCC9605_1989SYNCC9605_1260SYNCC9605_0717SYNCC9605_1260
SPRO399741 SPRO_0708SPRO_0708SPRO_0748SPRO_0748SPRO_0749SPRO_4757SPRO_0734SPRO_4499
SPEA398579 SPEA_0348SPEA_1911SPEA_1911SPEA_1910SPEA_0348SPEA_0345SPEA_2333
SONE211586 SO_4345SO_2279SO_2279SO_2278SO_4345SO_4347SO_2487
SMUT210007 SMU_2128SMU_2128SMU_231SMU_231SMU_232SMU_231SMU_2128
SMEL266834 SMB20890SMB20890SMB20681SMC01431SMC01430SMC04045SMC01431SMC03068
SMED366394 SMED_4478SMED_4478SMED_4308SMED_2008SMED_2007SMED_2723SMED_2008SMED_0298
SLOI323850 SHEW_0292SHEW_1776SHEW_1776SHEW_1775SHEW_0292SHEW_0289SHEW_2046
SLAC55218 SL1157_0897SL1157_0138SL1157_2554SL1157_2553SL1157_0897SL1157_2554SL1157_0138
SHAL458817 SHAL_3941SHAL_3941SHAL_2387SHAL_2387SHAL_2388SHAL_3941SHAL_3944SHAL_1951
SFUM335543 SFUM_0356SFUM_0356SFUM_3024SFUM_3024SFUM_3025SFUM_0356SFUM_3023SFUM_0356
SERY405948 SACE_1280SACE_1280SACE_6729SACE_6159SACE_6158SACE_6161SACE_6159SACE_1740
SENT454169 SEHA_C3840SEHA_C3840SEHA_C0625SEHA_C0127SEHA_C0128SEHA_C4235SEHA_C4232SEHA_C2099
SCO SCO1176SCO1176SCO6201SCO5512SCO5513SCO3345SCO5512
SBAL402882 SHEW185_4007SHEW185_4007SHEW185_2374SHEW185_2374SHEW185_2375SHEW185_4007SHEW185_4009SHEW185_2132
SBAL399599 SBAL195_4126SBAL195_4126SBAL195_2490SBAL195_2490SBAL195_2491SBAL195_4126SBAL195_4128SBAL195_2177
SARE391037 SARE_1121SARE_1121SARE_1123SARE_1123SARE_1124SARE_1121SARE_1123
SACI56780 SYN_01708SYN_01708SYN_01711SYN_01711SYN_01708SYN_01711SYN_01708
RSPH349101 RSPH17029_1303RSPH17029_1294RSPH17029_1294RSPH17029_1293RSPH17029_3801RSPH17029_1294RSPH17029_1303
RSP101510 RHA1_RO05087RHA1_RO05087RHA1_RO03223RHA1_RO06486RHA1_RO06487RHA1_RO06484RHA1_RO06486RHA1_RO02368
RPOM246200 SPO_3314SPO_3032SPO_2578SPO_2579SPO_3314SPO_2578SPO_3032
RPAL316057 RPD_2806RPD_2806RPD_2098RPD_2098RPD_2100RPD_3804RPD_2098
RPAL316056 RPC_4380RPC_4380RPC_3255RPC_3255RPC_3253RPC_4321RPC_3255
RPAL258594 RPA2155RPA2155RPA2031RPA2031RPA2032RPA1463RPA2031
RMET266264 RMET_2804RMET_4585RMET_3448RMET_0911RMET_0912RMET_4585RMET_1045
RLEG216596 RL3612RL3612RL3245RL3245RL3244RL1803RL3245RL0751
REUT381666 H16_A2987H16_A2987H16_A3598H16_A1035H16_A1036H16_B0280H16_A1178
REUT264198 REUT_A0639REUT_A0639REUT_A3291REUT_A0947REUT_A0948REUT_A2432REUT_A1081
RETL347834 RHE_CH03160RHE_CH03160RHE_CH02790RHE_CH02790RHE_CH02789RHE_CH01704RHE_CH02790RHE_CH00702
PTHE370438 PTH_0526PTH_0526PTH_0530PTH_0527PTH_0528PTH_0526PTH_0527PTH_0526
PSYR223283 PSPTO_3772PSPTO_3772PSPTO_0981PSPTO_0981PSPTO_0982PSPTO_5057PSPTO_1288
PSYR205918 PSYR_1708PSYR_1708PSYR_0846PSYR_0846PSYR_0847PSYR_0469PSYR_1109
PSTU379731 PST_2444PST_2444PST_3114PST_3258PST_3257PST_4012PST_3500
PSP296591 BPRO_2052BPRO_2052BPRO_4561BPRO_2317BPRO_2318BPRO_2052BPRO_3551
PPUT351746 PPUT_1048PPUT_1572PPUT_4544PPUT_4543PPUT_5002PPUT_4544PPUT_1048
PMOB403833 PMOB_1593PMOB_1593PMOB_1592PMOB_1592PMOB_1591PMOB_1593PMOB_1592PMOB_1593
PMAR93060 P9215_08681P9215_08681P9215_06071P9215_13601P9215_08681P9215_06071P9215_08681
PMAR74547 PMT0560PMT0560PMT1239PMT1239PMT1176PMT1239PMT0560
PMAR74546 PMT9312_0782PMT9312_0782PMT9312_0526PMT9312_1253PMT9312_0782PMT9312_0526PMT9312_0782
PMAR59920 PMN2A_0180PMN2A_0180PMN2A_1858PMN2A_1858PMN2A_0764PMN2A_0180PMN2A_1858PMN2A_0180
PMAR167555 NATL1_08121NATL1_08121NATL1_05831NATL1_05831NATL1_16041NATL1_08121NATL1_05831NATL1_08121
PMAR167546 P9301ORF_0850P9301ORF_0850P9301ORF_0565P9301ORF_1367P9301ORF_0850P9301ORF_0565P9301ORF_0850
PMAR167542 P9515ORF_0850P9515ORF_0850P9515ORF_0626P9515ORF_1381P9515ORF_0850P9515ORF_0626P9515ORF_0850
PMAR167540 PMM0774PMM0774PMM0526PMM1154PMM0774PMM0526PMM0774
PMAR167539 PRO_0847PRO_0847PRO_0526PRO_0526PRO_1251PRO_0847PRO_0526PRO_0847
PMAR146891 A9601_08361A9601_08361A9601_05821A9601_13311A9601_08361A9601_05821A9601_08361
PLUT319225 PLUT_0609PLUT_0609PLUT_0608PLUT_0605PLUT_0609PLUT_0608PLUT_0609
PING357804 PING_2151PING_2151PING_3430PING_3430PING_3431PING_0346PING_0348PING_2151
PHAL326442 PSHAB0129PSHAB0129PSHAB0464PSHAB0463PSHAA2769PSHAA2771PSHAA1366
PFLU216595 PFLU2367PFLU2367PFLU1803PFLU5220PFLU5219PFLU5797PFLU4964
PFLU205922 PFL_3227PFL_3227PFL_1598PFL_4788PFL_4787PFL_5358PFL_4788PFL_4375
PCAR338963 PCAR_1911PCAR_1911PCAR_1910PCAR_1910PCAR_1909PCAR_1911PCAR_1910
PAER208964 PA3194PA1502PA4696PA4695PA0353PA4696PA3194
PAER208963 PA14_22910PA14_45000PA14_62160PA14_62150PA14_04630PA14_62160PA14_22910
OIHE221109 OB2624OB2624OB2623OB2623OB2622OB2624OB2623
OCAR504832 OCAR_6278OCAR_6278OCAR_6562OCAR_5290OCAR_5291OCAR_4462OCAR_5290
OANT439375 OANT_0112OANT_0458OANT_1804OANT_1805OANT_0112OANT_1804OANT_3958
NSP387092 NIS_0126NIS_0126NIS_0810NIS_0810NIS_0811NIS_0126NIS_0810NIS_0126
NSP35761 NOCA_3419NOCA_3419NOCA_3392NOCA_3392NOCA_3391NOCA_3392NOCA_3419
NSP103690 ALR2771ALR2771ALL4613ALL4613ALR4627ALR2771ALL4613ALR2771
NFAR247156 NFA11740NFA11740NFA42320NFA42320NFA42310NFA42340NFA30060NFA11740
NEUT335283 NEUT_2238NEUT_2238NEUT_1262NEUT_1262NEUT_1261NEUT_2238NEUT_2238
NEUR228410 NE0104NE0104NE1325NE1325NE1324NE0104NE0104
NARO279238 SARO_1895SARO_1895SARO_2261SARO_2262SARO_1784SARO_2261SARO_1895
MVAN350058 MVAN_0173MVAN_0173MVAN_2122MVAN_2122MVAN_2123MVAN_1161MVAN_2122MVAN_0173
MTUB336982 TBFG_10190TBFG_13018TBFG_13018TBFG_13017TBFG_10190TBFG_13018TBFG_10190
MTHE349307 MTHE_0673MTHE_0673MTHE_0110MTHE_0110MTHE_0111MTHE_0673MTHE_0110
MTHE264732 MOTH_2259MOTH_2259MOTH_2258MOTH_2258MOTH_2257MOTH_2259MOTH_2258MOTH_2259
MTHE187420 MTH1449MTH1449MTH1444MTH1444MTH1443MTH1444MTH1449
MTBRV RV0189CRV3003CRV3003CRV3002CRV0189CRV3003CRV0189C
MTBCDC MT0199MT3083MT3083MT3082MT0199MT3083MT0199
MSP266779 MESO_1688MESO_1688MESO_1488MESO_1488MESO_1489MESO_2666MESO_1488MESO_0157
MSP189918 MKMS_0155MKMS_0155MKMS_1952MKMS_1952MKMS_1953MKMS_1952MKMS_0155
MSP164757 MJLS_0136MJLS_0136MJLS_1886MJLS_1886MJLS_1887MJLS_1886MJLS_0136
MSP164756 MMCS_0146MMCS_0146MMCS_1906MMCS_1906MMCS_1907MMCS_1906MMCS_0146
MSME246196 MSMEG_0229MSMEG_0229MSMEG_5476MSMEG_2372MSMEG_2373MSMEG_1290MSMEG_2372MSMEG_0313
MMAZ192952 MM0259MM0259MM0670MM0670MM0669MM0259MM0670MM0259
MMAR444158 MMARC6_0633MMARC6_0633MMARC6_0239MMARC6_0239MMARC6_0238MMARC6_0633MMARC6_0239
MMAR402880 MMARC5_1356MMARC5_1356MMARC5_0954MMARC5_0954MMARC5_0953MMARC5_1356MMARC5_0954
MMAR368407 MEMAR_0985MEMAR_0985MEMAR_1070MEMAR_1070MEMAR_1071MEMAR_0985MEMAR_1070
MMAR267377 MMP0318MMP0318MMP0650MMP0650MMP0651MMP0318MMP0650
MLOT266835 MLL1102MLL1102MLR0251MLL1433MLL1432MLR5361MLL1433MLL6512
MLAB410358 MLAB_0613MLAB_0613MLAB_0605MLAB_0605MLAB_0606MLAB_0613MLAB_0605
MKAN190192 MK1197MK0531MK0531MK0545MK1197MK0531MK1197
MJAN243232 MJ_1276MJ_1276MJ_0277MJ_0277MJ_0161MJ_1276MJ_0277MJ_1276
MHUN323259 MHUN_0139MHUN_0139MHUN_1242MHUN_1242MHUN_1241MHUN_0139MHUN_1242
MGIL350054 MFLV_0486MFLV_0486MFLV_4239MFLV_4239MFLV_4238MFLV_5171MFLV_4239MFLV_0486
MEXT419610 MEXT_1954MEXT_1954MEXT_4864MEXT_4866MEXT_2675MEXT_4864MEXT_2007
MCAP243233 MCA_2082MCA_2082MCA_2270MCA_2270MCA_2271MCA_2082MCA_2270MCA_0037
MBUR259564 MBUR_2246MBUR_2246MBUR_0710MBUR_0710MBUR_0709MBUR_2246MBUR_0710MBUR_2246
MBOV410289 BCG_0226CBCG_3025CBCG_3025CBCG_3024CBCG_0226CBCG_3025CBCG_0226C
MBOV233413 MB0195CMB3028CMB3028CMB3027CMB0195CMB3028CMB0195C
MBAR269797 MBAR_A2069MBAR_A0218MBAR_A0218MBAR_A0219MBAR_A2069MBAR_A0218MBAR_A2069
MAQU351348 MAQU_2116MAQU_2116MAQU_0882MAQU_0882MAQU_0883MAQU_2423MAQU_2114MAQU_1830
MAER449447 MAE_28670MAE_28670MAE_50700MAE_50700MAE_48120MAE_28670MAE_50700MAE_28670
MAEO419665 MAEO_0680MAEO_0680MAEO_0682MAEO_0682MAEO_0683MAEO_0680MAEO_0682MAEO_0680
MACE188937 MA1802MA3373MA3792MA3792MA3791MA1802MA3792MA3373
MABS561007 MAB_4545MAB_4545MAB_3323CMAB_3323CMAB_3322CMAB_4640CMAB_3323CMAB_4545
LXYL281090 LXX13210LXX13210LXX13200LXX13200LXX13180LXX13210LXX13210
LWEL386043 LWE2002LWE2002LWE2003LWE2004LWE2002LWE2003LWE2002
LSPH444177 BSPH_3390BSPH_3390BSPH_3389BSPH_3389BSPH_3388BSPH_3390BSPH_3389BSPH_3390
LMON265669 LMOF2365_2006LMOF2365_2006LMOF2365_2007LMOF2365_2008LMOF2365_2006LMOF2365_2007LMOF2365_2006
LMON169963 LMO1983LMO1983LMO1984LMO1985LMO1983LMO1984LMO1983
LINN272626 LIN2090LIN2090LIN2091LIN2092LIN2090LIN2091LIN2090
LCHO395495 LCHO_1490LCHO_1490LCHO_1135LCHO_2893LCHO_2892LCHO_2893LCHO_2919
KRAD266940 KRAD_1334KRAD_1334KRAD_1335KRAD_1336KRAD_1909KRAD_1335KRAD_1334
HMOD498761 HM1_1511HM1_1511HM1_1979HM1_1979HM1_1512HM1_1511HM1_1514HM1_1511
HHEP235279 HH_0850HH_0850HH_0864HH_0863HH_0850HH_0864HH_0850
HAUR316274 HAUR_4450HAUR_4450HAUR_4449HAUR_4449HAUR_4448HAUR_4450HAUR_4449
HARS204773 HEAR0734HEAR0734HEAR0332HEAR1237HEAR1238HEAR0734HEAR1086
GVIO251221 GLL3168GLL3168GLR3279GLR3279GLL1136GLR3279GLL3168
GURA351605 GURA_3721GURA_3721GURA_3720GURA_3720GURA_3719GURA_3721GURA_3720
GTHE420246 GTNG_1931GTNG_1931GTNG_2590GTNG_2590GTNG_2589GTNG_1931GTNG_2590GTNG_1931
GSUL243231 GSU_1912GSU_1912GSU_1911GSU_1911GSU_1910GSU_1912GSU_1911GSU_1912
GMET269799 GMET_1259GMET_1259GMET_1260GMET_1260GMET_1261GMET_1259GMET_1260GMET_1259
GKAU235909 GK2046GK2046GK2661GK2661GK2660GK2046GK2661GK2046
FSP1855 FRANEAN1_7305FRANEAN1_1090FRANEAN1_1090FRANEAN1_1091FRANEAN1_7305FRANEAN1_1090FRANEAN1_7067
ESP42895 ENT638_0455ENT638_0455ENT638_0624ENT638_0624ENT638_0625ENT638_4012ENT638_0025ENT638_2420
ECOL585056 ECUMN_4896ECUMN_4896ECUMN_0548ECUMN_0078ECUMN_0079ECUMN_4297ECUMN_4294ECUMN_2148
ECOL585035 ECS88_4908ECS88_4908ECS88_0506ECS88_0081ECS88_0082ECS88_4194ECS88_4191ECS88_1907
ECOL316407 ECK0270:JW0262:B0269ECK0270:JW0262:B0269ECK0500:JW0495:B0507ECK0079:JW0076:B0077ECK0080:JW0077:B0078ECK3763:JW5605:B3771ECK3662:JW3646:B3671ECK1852:JW1840:B1851
DVUL882 DVU_3373DVU_1376DVU_1376DVU_1377DVU_3373DVU_0360DVU_3373
DSP255470 CBDBA815CBDBA815CBDBA813CBDBA813CBDBA812CBDBA815CBDBA813CBDBA815
DSP216389 DEHABAV1_0753DEHABAV1_0753DEHABAV1_0752DEHABAV1_0752DEHABAV1_0751DEHABAV1_0753DEHABAV1_0752DEHABAV1_0753
DRED349161 DRED_0280DRED_0280DRED_0281DRED_0281DRED_0282DRED_0280DRED_0284DRED_0280
DOLE96561 DOLE_2036DOLE_2036DOLE_2037DOLE_2037DOLE_2038DOLE_2036DOLE_2036
DHAF138119 DSY3452DSY1365DSY4166DSY1366DSY1367DSY1365DSY1366DSY1365
DETH243164 DET_0834DET_0834DET_0833DET_0833DET_0832DET_0834DET_0833DET_0834
DDES207559 DDE_0116DDE_0116DDE_2168DDE_2168DDE_2167DDE_0116DDE_0398DDE_0116
CTEP194439 CT_0619CT_0619CT_0618CT_0618CT_0617CT_0619CT_0618CT_0619
CSP501479 CSE45_2357CSE45_3700CSE45_2368CSE45_2368CSE45_2369CSE45_3719CSE45_2368CSE45_2357
CRUT413404 RMAG_0529RMAG_0529RMAG_0445RMAG_0445RMAG_0446RMAG_0445RMAG_0529
CPSY167879 CPS_2080CPS_2080CPS_3236CPS_3237CPS_4846CPS_4843CPS_2283
CPHY357809 CPHY_3830CPHY_3830CPHY_3347CPHY_3021CPHY_3348CPHY_3347CPHY_3348
CMIC443906 CMM_1093CMM_1093CMM_1094CMM_1094CMM_1095CMM_1093CMM_1094CMM_1093
CMIC31964 CMS1413CMS1413CMS1414CMS1414CMS1415CMS1413CMS1414CMS1413
CMET456442 MBOO_1203MBOO_1203MBOO_1443MBOO_1443MBOO_1444MBOO_1203MBOO_1443MBOO_1203
CKLU431943 CKL_1693CKL_1693CKL_1081CKL_1617CKL_1693CKL_1081CKL_1693
CJEJ407148 C8J_0012C8J_0012C8J_0536C8J_0537C8J_0012C8J_0536C8J_0012
CJEJ360109 JJD26997_0013JJD26997_0013JJD26997_1096JJD26997_1095JJD26997_0013JJD26997_1096JJD26997_1271
CJEJ354242 CJJ81176_0039CJJ81176_0039CJJ81176_0602CJJ81176_0603CJJ81176_0039CJJ81176_0602CJJ81176_0039
CJEJ195099 CJE_0012CJE_0012CJE_0677CJE_0678CJE_0012CJE_0677CJE_0012
CJEJ192222 CJ0013CJ0013CJ0574CJ0575CJ0013CJ0574CJ0013
CHYD246194 CHY_0516CHY_0516CHY_0517CHY_0517CHY_0518CHY_0516CHY_0517CHY_0516
CHOM360107 CHAB381_1769CHAB381_1769CHAB381_1165CHAB381_1165CHAB381_1166CHAB381_1769CHAB381_1165CHAB381_1769
CEFF196164 CE2439CE2439CE1365CE1365CE1366CE1362CE1365
CDES477974 DAUD_0540DAUD_0540DAUD_0352DAUD_0352DAUD_0353DAUD_0540DAUD_0352DAUD_0540
CCUR360105 CCV52592_2036CCV52592_2036CCV52592_1428CCV52592_1429CCV52592_2036CCV52592_1428CCV52592_2036
CCHL340177 CAG_1906CAG_1906CAG_1905CAG_1905CAG_1903CAG_1906CAG_1905CAG_1906
BWEI315730 BCERKBAB4_1710BCERKBAB4_1710BCERKBAB4_1319BCERKBAB4_1707BCERKBAB4_1320BCERKBAB4_1710BCERKBAB4_1707BCERKBAB4_1710
BVIE269482 BCEP1808_3832BCEP1808_3832BCEP1808_1802BCEP1808_2349BCEP1808_2348BCEP1808_4698BCEP1808_0628
BTHU412694 BALH_1628BALH_1628BALH_1252BALH_1624BALH_1253BALH_1628BALH_1624BALH_1628
BTHU281309 BT9727_1694BT9727_1694BT9727_1691BT9727_1691BT9727_1282BT9727_1694BT9727_1691BT9727_1694
BSUB BSU21870BSU21870BSU28310BSU28310BSU28300BSU21870BSU28310BSU21870
BSP376 BRADO4080BRADO4080BRADO4946BRADO5564BRADO5562BRADO2754BRADO5564
BSP36773 BCEP18194_A5793BCEP18194_A5793BCEP18194_A5178BCEP18194_A5592BCEP18194_A5591BCEP18194_B1899BCEP18194_A3746
BPUM315750 BPUM_1922BPUM_1922BPUM_2472BPUM_2472BPUM_2471BPUM_1922BPUM_2472BPUM_1922
BPET94624 BPET0676BPET0676BPET1604BPET1604BPET1605BPET4518BPET0676
BPAR257311 BPP3770BPP3770BPP3437BPP4381BPP3436BPP0429BPP3770
BOVI236 GBOORF0103GBOORF1403GBOORF1403GBOORF1402GBOORF0103GBOORF1403GBOORFA0803
BMEL359391 BAB1_0096BAB1_1408BAB1_1408BAB1_1407BAB1_0096BAB1_1408BAB2_0458
BMEL224914 BMEI1848BMEI0617BMEI0617BMEI0618BMEI1848BMEI0617BMEII0511
BLIC279010 BL05225BL05225BL00608BL00608BL00609BL05225BL00608BL05225
BJAP224911 BLL4763BLL4763BLR3166BLL6503BLL6501BLL4536BLL6503
BCLA66692 ABC1110ABC1110ABC2645ABC2645ABC2644ABC2646ABC2645ABC2646
BCER572264 BCA_1859BCA_1859BCA_1452BCA_1856BCA_1453BCA_1859BCA_1856BCA_1859
BCER405917 BCE_1937BCE_1937BCE_1517BCE_1934BCE_1518BCE_1937BCE_1934BCE_1937
BCER315749 BCER98_1446BCER98_1446BCER98_1120BCER98_1120BCER98_1121BCER98_1446BCER98_1120BCER98_1446
BCER288681 BCE33L1669BCE33L1669BCE33L1282BCE33L1666BCE33L1283BCE33L1669BCE33L1666BCE33L1669
BCER226900 BC_1780BC_1780BC_1777BC_1777BC_1398BC_1780BC_1777BC_1780
BCEN331272 BCEN2424_2462BCEN2424_2462BCEN2424_1878BCEN2424_2265BCEN2424_2264BCEN2424_4135BCEN2424_0660
BCEN331271 BCEN_1851BCEN_1851BCEN_6201BCEN_1654BCEN_1653BCEN_4231BCEN_0177
BCAN483179 BCAN_A0102BCAN_A1421BCAN_A1421BCAN_A1420BCAN_A0102BCAN_A1421BCAN_B0792
BBRO257310 BB4216BB4216BB3887BB4967BB3886BB0431BB4216
BANT592021 BAA_1922BAA_1922BAA_1919BAA_1919BAA_1485BAA_1922BAA_1919BAA_1922
BANT568206 BAMEG_2739BAMEG_2739BAMEG_2742BAMEG_2742BAMEG_3177BAMEG_2739BAMEG_2742BAMEG_2739
BANT261594 GBAA1853GBAA1853GBAA1850GBAA1850GBAA1418GBAA1853GBAA1850GBAA1853
BANT260799 BAS1717BAS1717BAS1714BAS1714BAS1309BAS1717BAS1714BAS1717
BAMY326423 RBAM_020010RBAM_020010RBAM_025370RBAM_025370RBAM_025360RBAM_020010RBAM_025370RBAM_020010
BAMB398577 BAMMC406_2379BAMMC406_2379BAMMC406_1787BAMMC406_2181BAMMC406_2180BAMMC406_4027BAMMC406_0581
BAMB339670 BAMB_2511BAMB_2511BAMB_1815BAMB_2303BAMB_2302BAMB_3546BAMB_0555
BABO262698 BRUAB1_0096BRUAB1_1385BRUAB1_1385BRUAB1_1384BRUAB1_0096BRUAB1_1385BRUAB2_0452
AVAR240292 AVA_B0062AVA_0023AVA_2757AVA_2757AVA_2035AVA_0023AVA_2757AVA_0023
ASP76114 EBA478EBA478EBA7130EBA7132EBA1822EBA4751EBA6761
ASP1667 ARTH_2540ARTH_2540ARTH_3691ARTH_2539ARTH_2538ARTH_2540ARTH_2540
ASAL382245 ASA_4109ASA_3404ASA_3404ASA_3403ASA_0122ASA_0119ASA_4109
AMET293826 AMET_1268AMET_0502AMET_3400AMET_3403AMET_3534AMET_3418AMET_3534
AMAR329726 AM1_3143AM1_3143AM1_3085AM1_3085AM1_2118AM1_3085AM1_3143
AFUL224325 AF_1014AF_1014AF_1720AF_1720AF_1719AF_1014AF_1720AF_1014
AFER243159 AFE_1412AFE_1412AFE_2295AFE_2294AFE_2378AFE_2295AFE_1412
ADEH290397 ADEH_4111ADEH_4111ADEH_1978ADEH_1978ADEH_1977ADEH_4111ADEH_1978ADEH_4111
ACEL351607 ACEL_0705ACEL_0705ACEL_0706ACEL_0706ACEL_0707ACEL_0706ACEL_0705
ACAU438753 AZC_1408AZC_3488AZC_2376AZC_2375AZC_3530AZC_2376AZC_2424
ABOR393595 ABO_0180ABO_0180ABO_0481ABO_0481ABO_0482ABO_2312ABO_0180
AAUR290340 AAUR_2510AAUR_2510AAUR_3508AAUR_2509AAUR_2508AAUR_0356AAUR_2510
AAEO224324 AQ_837AQ_837AQ_451AQ_451AQ_1851AQ_837AQ_451AQ_837


Organism features enriched in list (features available for 208 out of the 223 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.0047643117
Arrangment:Pairs 0.000690626112
Disease:Food_poisoning 0.000083699
Disease:None 0.00160173158
Endospores:No 0.004086962211
Endospores:Yes 0.00002363353
GC_Content_Range4:0-40 5.431e-652213
GC_Content_Range4:60-100 0.000026472145
GC_Content_Range7:0-30 9.693e-9147
GC_Content_Range7:60-70 0.000185165134
Genome_Size_Range5:0-2 0.000021935155
Genome_Size_Range5:4-6 0.008089877184
Genome_Size_Range5:6-10 1.951e-63247
Genome_Size_Range9:1-2 0.006820135128
Genome_Size_Range9:5-6 0.00685204188
Genome_Size_Range9:6-8 0.00001762638
Gram_Stain:Gram_Neg 0.0005658101333
Habitat:Aquatic 0.00005394991
Habitat:Host-associated 3.356e-2025206
Habitat:Multiple 0.000662880178
Habitat:Terrestrial 0.00178931931
Motility:Yes 0.0040672109267
Optimal_temp.:- 0.0007539109257
Optimal_temp.:37 0.000122722106
Oxygen_Req:Anaerobic 0.000849550102
Oxygen_Req:Facultative 0.000104652201
Pathogenic_in:Animal 0.00142581366
Pathogenic_in:Human 2.566e-944213
Pathogenic_in:No 2.380e-10116226
Shape:Coccus 0.00671492082
Shape:Irregular_coccus 0.00970741117
Shape:Oval 0.005602955
Shape:Sphere 0.0021400119
Temp._range:Thermophilic 0.00402042035



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 134
Effective number of orgs (counting one per cluster within 468 clusters): 98

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SMAR399550 ncbi Staphylothermus marinus F10
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PRUM264731 ncbi Prevotella ruminicola 231
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PAST100379 Onion yellows phytoplasma0
PACN267747 ncbi Propionibacterium acnes KPA1712020
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
MXAN246197 ncbi Myxococcus xanthus DK 16220
MSYN262723 ncbi Mycoplasma synoviae 530
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MART243272 ncbi Mycoplasma arthritidis 158L3-10
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby1
LPNE297246 ncbi Legionella pneumophila Paris1
LPNE297245 ncbi Legionella pneumophila Lens1
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 11
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM0
ILOI283942 ncbi Idiomarina loihiensis L2TR0
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba1
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CMUR243161 ncbi Chlamydia muridarum Nigg0
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BQUI283165 ncbi Bartonella quintana Toulouse0
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ0
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0


Names of the homologs of the genes in the group in each of these orgs
  G7910   G6141   EG11583   EG10500   EG10499   EG10496   EG10494   EG10257   
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
TVOL273116
TPEN368408
TPAL243276
TLET416591
TKOD69014
TDEN243275
TACI273075
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SMAR399550
SAGA211110
SAGA208435
SAGA205921
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PRUM264731 GFRORF1078
PPEN278197
PINT246198
PHOR70601
PGIN242619
PAST100379
PACN267747
OTSU357244
NSEN222891
MXAN246197
MSYN262723
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MHYO295358
MHYO262722
MHYO262719
MGEN243273
MFLO265311
MCAP340047
MART243272
LSAK314315
LREU557436
LPNE400673 LPC_2925
LPNE297246 LPP0485
LPNE297245 LPL0461
LPNE272624 LPG0418
LPLA220668
LJOH257314
LINT363253
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LACI272621
ILOI283942
HSP64091
HSAL478009
HPYL85963 JHP1026
HPYL357544 HPAG1_1038
HPY HP1100
HDUC233412
HBUT415426
HACI382638 HAC_0442
FTUL458234
FTUL393011
FTUL351581
FNUC190304
FNOD381764
FMAG334413
ERUM302409
ERUM254945
EFAE226185
ECHA205920
ECAN269484
DNOD246195
CTRA471473
CTRA471472
CTET212717
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380
CPER195103
CPER195102
CMUR243161
CFEL264202
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CABO218497
BTUR314724
BTHE226186 BT_2078
BQUI283165
BHER314723
BGAR290434
BFRA295405 BF3763
BFRA272559 BF3551
BCIC186490
BBUR224326
BBAC360095
BBAC264462
BAFZ390236
AYEL322098
AURANTIMONAS
APHA212042
AORE350688
AMAR234826
ALAI441768


Organism features enriched in list (features available for 125 out of the 134 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 5.948e-68112
Disease:Gas_gangrene 0.009671033
Disease:Legionnaire's_disease 0.002034244
Disease:None 0.0013586458
Disease:Pharyngitis 3.729e-688
Disease:Rocky_Mountain_Spotted_Fever 0.009671033
Disease:Wide_range_of_infections 3.078e-81111
Disease:bronchitis_and_pneumonitis 3.729e-688
Endospores:Yes 0.0099651553
GC_Content_Range4:0-40 2.174e-1888213
GC_Content_Range4:40-60 0.001104634224
GC_Content_Range4:60-100 4.515e-143145
GC_Content_Range7:0-30 1.464e-82747
GC_Content_Range7:30-40 2.432e-861166
GC_Content_Range7:50-60 8.539e-76107
GC_Content_Range7:60-70 1.219e-123134
Genome_Size_Range5:0-2 1.512e-3288155
Genome_Size_Range5:4-6 5.031e-212184
Genome_Size_Range5:6-10 0.0006816247
Genome_Size_Range9:0-1 2.306e-71827
Genome_Size_Range9:1-2 3.521e-2270128
Genome_Size_Range9:5-6 3.394e-8288
Genome_Size_Range9:6-8 0.0008310138
Habitat:Aquatic 1.517e-7391
Habitat:Host-associated 6.658e-1987206
Habitat:Multiple 0.000047221178
Habitat:Terrestrial 0.0040688131
Motility:Yes 3.247e-733267
Optimal_temp.:37 1.007e-744106
Oxygen_Req:Aerobic 0.003299428185
Pathogenic_in:Animal 0.00312212366
Pathogenic_in:Human 2.831e-770213
Pathogenic_in:No 9.642e-824226
Pathogenic_in:Ruminant 0.009671033
Salinity:Non-halophilic 0.000817135106
Shape:Rod 0.001930561347
Shape:Sphere 7.604e-81519



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 71
Effective number of orgs (counting one per cluster within 468 clusters): 66

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
MAEO419665 ncbi Methanococcus aeolicus Nankai-3 3.434e-73448
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 2661 6.324e-73718
CMET456442 ncbi Candidatus Methanoregula boonei 6A8 1.445e-64118
MBUR259564 ncbi Methanococcoides burtonii DSM 6242 3.778e-64638
AFUL224325 ncbi Archaeoglobus fulgidus DSM 4304 6.579e-64968
MKAN190192 ncbi Methanopyrus kandleri AV19 0.00001042907
PMAR59920 ncbi Prochlorococcus marinus NATL2A 0.00001295398
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP1375 0.00001455478
PMAR167555 ncbi Prochlorococcus marinus NATL1A 0.00001515508
UMET351160 ncbi uncultured methanogenic archaeon RC-I 0.00001885658
DETH243164 ncbi Dehalococcoides ethenogenes 195 0.00002135748
DSP216389 ncbi Dehalococcoides sp. BAV1 0.00002495858
DSP255470 ncbi Dehalococcoides sp. CBDB1 0.00002705918
MMAZ192952 ncbi Methanosarcina mazei Go1 0.00003056008
CHOM360107 ncbi Campylobacter hominis ATCC BAA-381 0.00003626138
MLAB410358 ncbi Methanocorpusculum labreanum Z 0.00005023637
MACE188937 ncbi Methanosarcina acetivorans C2A 0.00006026538
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H 0.00007313837
MTHE349307 ncbi Methanosaeta thermophila PT 0.00009733997
MMAR267377 ncbi Methanococcus maripaludis S2 0.00011764107
SSP64471 ncbi Synechococcus sp. CC9311 0.00012637168
MMAR402880 ncbi Methanococcus maripaludis C5 0.00013234177
MMAR444158 ncbi Methanococcus maripaludis C6 0.00014144217
CCHL340177 ncbi Chlorobium chlorochromatii CaD3 0.00029287958
PMOB403833 ncbi Petrotoga mobilis SJ95 0.00031108018
NSP387092 ncbi Nitratiruptor sp. SB155-2 0.00032058048
AAEO224324 ncbi Aquifex aeolicus VF5 0.00033038078
MMAR368407 ncbi Methanoculleus marisnigri JR1 0.00035784817
PMAR167540 Prochlorococcus marinus pastoris MED4ax 0.00036304827
MHUN323259 ncbi Methanospirillum hungatei JF-1 0.00037904857
PMAR167542 ncbi Prochlorococcus marinus MIT 9515 0.00040134897
PMAR146891 ncbi Prochlorococcus marinus AS9601 0.00040704907
PMAR167546 ncbi Prochlorococcus marinus MIT 9301 0.00043684957
PMAR74546 ncbi Prochlorococcus marinus MIT 9312 0.00050195057
PMAR93060 ncbi Prochlorococcus marinus MIT 9215 0.00055235127
CMIC31964 ncbi Clavibacter michiganensis sepedonicus 0.00055578618
CTEP194439 ncbi Chlorobium tepidum TLS 0.00059858698
SSP387093 ncbi Sulfurovum sp. NBC37-1 0.00060418708
WSUC273121 ncbi Wolinella succinogenes DSM 1740 0.00062108738
MSTA339860 ncbi Methanosphaera stadtmanae DSM 3091 0.00066032996
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 382 0.00086689108
TERY203124 ncbi Trichodesmium erythraeum IMS101 0.00119379478
SSP321327 ncbi Synechococcus sp. JA-3-3Ab 0.00122449508
SSP1148 ncbi Synechocystis sp. PCC 6803 0.00126649548
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13) 0.00130979588
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C 0.00134309618
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen 0.00142369688
MAER449447 ncbi Microcystis aeruginosa NIES-843 0.00159759828
MABS561007 ncbi Mycobacterium abscessus ATCC 19977 0.002116210178
MBAR269797 ncbi Methanosarcina barkeri Fusaro 0.00222566267
PMAR74547 ncbi Prochlorococcus marinus MIT 9313 0.00270756447
HHEP235279 ncbi Helicobacter hepaticus ATCC 51449 0.00288686507
LXYL281090 ncbi Leifsonia xyli xyli CTCB07 0.00301186547
CJEJ195099 ncbi Campylobacter jejuni RM1221 0.00367056737
CJEJ360109 ncbi Campylobacter jejuni doylei 269.97 0.00374656757
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 11168 0.00427386887
PTHE370438 ncbi Pelotomaculum thermopropionicum SI 0.004590211208
STHE322159 ncbi Streptococcus thermophilus LMD-9 0.00462866967
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-176 0.00467476977
SSP84588 ncbi Synechococcus sp. WH 8102 0.00481537007
SSP1131 Synechococcus sp. CC9605 0.00481537007
MMAR426368 ncbi Methanococcus maripaludis C7 0.00487154196
CJEJ407148 ncbi Campylobacter jejuni jejuni 81116 0.00541417127
STHE299768 ncbi Streptococcus thermophilus CNRZ1066 0.00551987147
STHE264199 ncbi Streptococcus thermophilus LMG 18311 0.00568177177
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK 0.005999511588
NFAR247156 ncbi Nocardia farcinica IFM 10152 0.007516811918
HMOD498761 ncbi Heliobacterium modesticaldum Ice1 0.007516811918
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00810917557
CCUR360105 ncbi Campylobacter curvus 525.92 0.00848607607
NSP103690 ncbi Nostoc sp. PCC 7120 0.008763612148


Names of the homologs of the genes in the group in each of these orgs
  G7910   G6141   EG11583   EG10500   EG10499   EG10496   EG10494   EG10257   
MAEO419665 MAEO_0680MAEO_0680MAEO_0682MAEO_0682MAEO_0683MAEO_0680MAEO_0682MAEO_0680
MJAN243232 MJ_1276MJ_1276MJ_0277MJ_0277MJ_0161MJ_1276MJ_0277MJ_1276
CMET456442 MBOO_1203MBOO_1203MBOO_1443MBOO_1443MBOO_1444MBOO_1203MBOO_1443MBOO_1203
MBUR259564 MBUR_2246MBUR_2246MBUR_0710MBUR_0710MBUR_0709MBUR_2246MBUR_0710MBUR_2246
AFUL224325 AF_1014AF_1014AF_1720AF_1720AF_1719AF_1014AF_1720AF_1014
MKAN190192 MK1197MK0531MK0531MK0545MK1197MK0531MK1197
PMAR59920 PMN2A_0180PMN2A_0180PMN2A_1858PMN2A_1858PMN2A_0764PMN2A_0180PMN2A_1858PMN2A_0180
PMAR167539 PRO_0847PRO_0847PRO_0526PRO_0526PRO_1251PRO_0847PRO_0526PRO_0847
PMAR167555 NATL1_08121NATL1_08121NATL1_05831NATL1_05831NATL1_16041NATL1_08121NATL1_05831NATL1_08121
UMET351160 RCIX238RCIX238LRC534LRC534LRC533RCIX1841LRC534RCIX1841
DETH243164 DET_0834DET_0834DET_0833DET_0833DET_0832DET_0834DET_0833DET_0834
DSP216389 DEHABAV1_0753DEHABAV1_0753DEHABAV1_0752DEHABAV1_0752DEHABAV1_0751DEHABAV1_0753DEHABAV1_0752DEHABAV1_0753
DSP255470 CBDBA815CBDBA815CBDBA813CBDBA813CBDBA812CBDBA815CBDBA813CBDBA815
MMAZ192952 MM0259MM0259MM0670MM0670MM0669MM0259MM0670MM0259
CHOM360107 CHAB381_1769CHAB381_1769CHAB381_1165CHAB381_1165CHAB381_1166CHAB381_1769CHAB381_1165CHAB381_1769
MLAB410358 MLAB_0613MLAB_0613MLAB_0605MLAB_0605MLAB_0606MLAB_0613MLAB_0605
MACE188937 MA1802MA3373MA3792MA3792MA3791MA1802MA3792MA3373
MTHE187420 MTH1449MTH1449MTH1444MTH1444MTH1443MTH1444MTH1449
MTHE349307 MTHE_0673MTHE_0673MTHE_0110MTHE_0110MTHE_0111MTHE_0673MTHE_0110
MMAR267377 MMP0318MMP0318MMP0650MMP0650MMP0651MMP0318MMP0650
SSP64471 GSYN1809GSYN1809GSYN2129GSYN2129GSYN0962GSYN1809GSYN2129GSYN1809
MMAR402880 MMARC5_1356MMARC5_1356MMARC5_0954MMARC5_0954MMARC5_0953MMARC5_1356MMARC5_0954
MMAR444158 MMARC6_0633MMARC6_0633MMARC6_0239MMARC6_0239MMARC6_0238MMARC6_0633MMARC6_0239
CCHL340177 CAG_1906CAG_1906CAG_1905CAG_1905CAG_1903CAG_1906CAG_1905CAG_1906
PMOB403833 PMOB_1593PMOB_1593PMOB_1592PMOB_1592PMOB_1591PMOB_1593PMOB_1592PMOB_1593
NSP387092 NIS_0126NIS_0126NIS_0810NIS_0810NIS_0811NIS_0126NIS_0810NIS_0126
AAEO224324 AQ_837AQ_837AQ_451AQ_451AQ_1851AQ_837AQ_451AQ_837
MMAR368407 MEMAR_0985MEMAR_0985MEMAR_1070MEMAR_1070MEMAR_1071MEMAR_0985MEMAR_1070
PMAR167540 PMM0774PMM0774PMM0526PMM1154PMM0774PMM0526PMM0774
MHUN323259 MHUN_0139MHUN_0139MHUN_1242MHUN_1242MHUN_1241MHUN_0139MHUN_1242
PMAR167542 P9515ORF_0850P9515ORF_0850P9515ORF_0626P9515ORF_1381P9515ORF_0850P9515ORF_0626P9515ORF_0850
PMAR146891 A9601_08361A9601_08361A9601_05821A9601_13311A9601_08361A9601_05821A9601_08361
PMAR167546 P9301ORF_0850P9301ORF_0850P9301ORF_0565P9301ORF_1367P9301ORF_0850P9301ORF_0565P9301ORF_0850
PMAR74546 PMT9312_0782PMT9312_0782PMT9312_0526PMT9312_1253PMT9312_0782PMT9312_0526PMT9312_0782
PMAR93060 P9215_08681P9215_08681P9215_06071P9215_13601P9215_08681P9215_06071P9215_08681
CMIC31964 CMS1413CMS1413CMS1414CMS1414CMS1415CMS1413CMS1414CMS1413
CTEP194439 CT_0619CT_0619CT_0618CT_0618CT_0617CT_0619CT_0618CT_0619
SSP387093 SUN_2427SUN_2427SUN_1823SUN_1823SUN_1822SUN_2427SUN_1823SUN_2427
WSUC273121 WS0130WS0130WS0103WS0103WS0102WS0130WS0103WS0130
MSTA339860 MSP_1576MSP_1576MSP_0029MSP_0028MSP_1576MSP_1576
CMIC443906 CMM_1093CMM_1093CMM_1094CMM_1094CMM_1095CMM_1093CMM_1094CMM_1093
TERY203124 TERY_0019TERY_0019TERY_2843TERY_2843TERY_1850TERY_0019TERY_2843TERY_0019
SSP321327 CYA_1697CYA_1697CYA_2073CYA_2073CYA_2130CYA_1697CYA_2073CYA_1697
SSP1148 SLR0452SLR0452SLR2088SLR2088SLL0065SLR0452SLR2088SLR0452
SSP321332 CYB_1987CYB_1987CYB_0648CYB_0648CYB_0971CYB_1987CYB_0648CYB_1987
CDES477974 DAUD_0540DAUD_0540DAUD_0352DAUD_0352DAUD_0353DAUD_0540DAUD_0352DAUD_0540
SWOL335541 SWOL_2147SWOL_2147SWOL_2146SWOL_2146SWOL_2145SWOL_2147SWOL_2146SWOL_2147
MAER449447 MAE_28670MAE_28670MAE_50700MAE_50700MAE_48120MAE_28670MAE_50700MAE_28670
MABS561007 MAB_4545MAB_4545MAB_3323CMAB_3323CMAB_3322CMAB_4640CMAB_3323CMAB_4545
MBAR269797 MBAR_A2069MBAR_A0218MBAR_A0218MBAR_A0219MBAR_A2069MBAR_A0218MBAR_A2069
PMAR74547 PMT0560PMT0560PMT1239PMT1239PMT1176PMT1239PMT0560
HHEP235279 HH_0850HH_0850HH_0864HH_0863HH_0850HH_0864HH_0850
LXYL281090 LXX13210LXX13210LXX13200LXX13200LXX13180LXX13210LXX13210
CJEJ195099 CJE_0012CJE_0012CJE_0677CJE_0678CJE_0012CJE_0677CJE_0012
CJEJ360109 JJD26997_0013JJD26997_0013JJD26997_1096JJD26997_1095JJD26997_0013JJD26997_1096JJD26997_1271
CJEJ192222 CJ0013CJ0013CJ0574CJ0575CJ0013CJ0574CJ0013
PTHE370438 PTH_0526PTH_0526PTH_0530PTH_0527PTH_0528PTH_0526PTH_0527PTH_0526
STHE322159 STER_1566STER_1851STER_1850STER_1850STER_1849STER_1851STER_1851
CJEJ354242 CJJ81176_0039CJJ81176_0039CJJ81176_0602CJJ81176_0603CJJ81176_0039CJJ81176_0602CJJ81176_0039
SSP84588 SYNW1123OR3467SYNW1123OR3467SYNW1746OR2980SYNW0680OR1970SYNW1123OR3467SYNW1746OR2980SYNW1123OR3467
SSP1131 SYNCC9605_1260SYNCC9605_1260SYNCC9605_0717SYNCC9605_1989SYNCC9605_1260SYNCC9605_0717SYNCC9605_1260
MMAR426368 MMARC7_1320MMARC7_1320MMARC7_1674MMARC7_1675MMARC7_1320MMARC7_1674
CJEJ407148 C8J_0012C8J_0012C8J_0536C8J_0537C8J_0012C8J_0536C8J_0012
STHE299768 STR1604STR1874STR1873STR1873STR1872STR1874STR1604
STHE264199 STU1604STU1874STU1873STU1873STU1872STU1874STU1604
MGIL350054 MFLV_0486MFLV_0486MFLV_4239MFLV_4239MFLV_4238MFLV_5171MFLV_4239MFLV_0486
NFAR247156 NFA11740NFA11740NFA42320NFA42320NFA42310NFA42340NFA30060NFA11740
HMOD498761 HM1_1511HM1_1511HM1_1979HM1_1979HM1_1512HM1_1511HM1_1514HM1_1511
CRUT413404 RMAG_0529RMAG_0529RMAG_0445RMAG_0445RMAG_0446RMAG_0445RMAG_0529
CCUR360105 CCV52592_2036CCV52592_2036CCV52592_1428CCV52592_1429CCV52592_2036CCV52592_1428CCV52592_2036
NSP103690 ALR2771ALR2771ALL4613ALL4613ALR4627ALR2771ALL4613ALR2771


Organism features enriched in list (features available for 69 out of the 71 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.000133969
Endospores:No 0.003262135211
GC_Content_Range7:30-40 0.007429128166
GC_Content_Range7:60-70 0.00230807134
Genome_Size_Range5:0-2 8.613e-736155
Genome_Size_Range5:4-6 1.722e-66184
Genome_Size_Range9:1-2 2.527e-936128
Genome_Size_Range9:4-5 0.0002070296
Genome_Size_Range9:5-6 0.0081939488
Gram_Stain:Gram_Neg 0.000106825333
Habitat:Aquatic 9.635e-72691
Habitat:Host-associated 3.983e-77206
Motility:No 0.007648326151
Optimal_temp.:- 0.009027039257
Optimal_temp.:35-40 0.001594633
Oxygen_Req:Aerobic 0.000325210185
Oxygen_Req:Anaerobic 1.550e-932102
Oxygen_Req:Facultative 2.815e-94201
Oxygen_Req:Microaerophilic 0.0022134718
Pathogenic_in:Human 3.288e-69213
Pathogenic_in:No 4.830e-644226
Shape:Irregular_coccus 1.120e-81217
Shape:Oval 0.000805445
Shape:Rod 1.742e-918347
Shape:Spiral 0.0087655934
Temp._range:Mesophilic 0.005304548473
Temp._range:Thermophilic 0.00091751135



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6141   EG11583   EG10500   EG10499   EG10496   EG10494   EG10257   
G79100.9999990.9991040.9990820.998930.9998960.9992870.999911
G61410.9991560.999180.999040.9998970.9994230.999922
EG115830.9999670.999950.998850.9998720.998809
EG1050010.9990120.9999720.999093
EG104990.998820.9999380.99898
EG104960.9995390.999788
EG104940.999043
EG10257



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PAIRWISE BLAST SCORES:

  G7910   G6141   EG11583   EG10500   EG10499   EG10496   EG10494   EG10257   
G79100.0f00------
G614100.0f0------
EG11583--0.0f02.4e-79----
EG10500---0.0f0----
EG10499----0.0f0---
EG10496-----0.0f0--
EG10494------0.0f0-
EG10257-------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis) (degree of match pw to cand: 0.250, degree of match cand to pw: 0.500, average score: 0.935)
  Genes in pathway or complex:
             0.9942 0.9716 EG11575 (leuD) LEUD-MONOMER (LeuD)
             0.9940 0.9703 EG11576 (leuC) LEUC-MONOMER (LeuC)
             0.9990 0.9981 EG11226 (leuA) 2-ISOPROPYLMALATESYN-MONOMER (2-isopropylmalate synthase)
             0.7261 0.3213 EG11040 (tyrB) TYRB-MONOMER (TyrB)
             0.9988 0.9982 EG11577 (leuB) 3-ISOPROPYLMALDEHYDROG-MONOMER (LeuB)
             0.9833 0.9323 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
             0.7139 0.1390 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
             0.9991 0.9982 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9996 0.9990 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9995 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9990 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
             0.9993 0.9983 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
             0.9956 0.9883 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
   *in cand* 0.9995 0.9988 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9988 EG10257 (edd) PGLUCONDEHYDRAT-MONOMER (phosphogluconate dehydratase)
   *in cand* 0.9995 0.9988 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9996 0.9990 G6141 (yagF) G6141-MONOMER (CP4-6 prophage; predicted dehydratase)
   *in cand* 0.9995 0.9989 G7910 (yjhG) G7910-MONOMER (KpLE2 phage-like element; predicted dehydratase)

- THREOCAT-PWY (superpathway of threonine metabolism) (degree of match pw to cand: 0.167, degree of match cand to pw: 0.500, average score: 0.637)
  Genes in pathway or complex:
             0.5469 0.2991 M014 (mhpF) MHPF-MONOMER (acetaldehyde dehydrogenase 2)
             0.4236 0.0679 EG10031 (adhE) ADHE-MONOMER (AdhE)
             0.5364 0.1932 G6455 (ltaE) LTAA-MONOMER (LtaA)
             0.6226 0.3095 EG13139 (tynA) AMINEOXID-MONOMER (TynA)
             0.6326 0.1289 EG10512 (kbl) AKBLIG-MONOMER (Kbl)
             0.5825 0.1589 EG10027 (ackA) ACETATEKINA-MONOMER (propionate kinase / acetate kinase)
             0.5523 0.0912 EG11172 (tdcD) PROPKIN-MONOMER (propionate kinase)
             0.4344 0.0033 EG20173 (pta) PHOSACETYLTRANS-MONOMER (Pta)
             0.3766 0.1298 EG10701 (pflB) PYRUVFORMLY-MONOMER (PflB)
             0.4024 0.1241 G7627 (tdcE) KETOBUTFORMLY-MONOMER (2-ketobutyrate formate-lyase / pyruvate formate-lyase 4)
             0.9812 0.9369 EG10990 (tdcB) THREDEHYDCAT-MONOMER (TdcB)
             0.9833 0.9323 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
             0.7139 0.1390 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
             0.9991 0.9982 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9996 0.9990 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9995 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9990 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
             0.9993 0.9983 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
             0.9956 0.9883 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
   *in cand* 0.9995 0.9988 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.6377 0.3444 EG11904 (gldA) GLYCDEH-MONOMER (GldA)
             0.8127 0.4131 EG10993 (tdh) THREODEHYD-MONOMER (Tdh)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9988 EG10257 (edd) PGLUCONDEHYDRAT-MONOMER (phosphogluconate dehydratase)
   *in cand* 0.9995 0.9988 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9996 0.9990 G6141 (yagF) G6141-MONOMER (CP4-6 prophage; predicted dehydratase)
   *in cand* 0.9995 0.9989 G7910 (yjhG) G7910-MONOMER (KpLE2 phage-like element; predicted dehydratase)

- VALSYN-PWY (valine biosynthesis) (degree of match pw to cand: 0.400, degree of match cand to pw: 0.500, average score: 0.972)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9988 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.9956 0.9883 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.9993 0.9983 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
             0.9991 0.9982 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9996 0.9990 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
             0.7139 0.1390 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
   *in cand* 0.9995 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9990 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9988 EG10257 (edd) PGLUCONDEHYDRAT-MONOMER (phosphogluconate dehydratase)
   *in cand* 0.9995 0.9988 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9996 0.9990 G6141 (yagF) G6141-MONOMER (CP4-6 prophage; predicted dehydratase)
   *in cand* 0.9995 0.9989 G7910 (yjhG) G7910-MONOMER (KpLE2 phage-like element; predicted dehydratase)

- ACETOLACTSYNIII-CPLX (acetolactate synthase / acetohydroxybutanoate synthase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.250, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9990 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9988 EG10257 (edd) PGLUCONDEHYDRAT-MONOMER (phosphogluconate dehydratase)
   *in cand* 0.9996 0.9990 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
   *in cand* 0.9995 0.9988 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
   *in cand* 0.9995 0.9988 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9996 0.9990 G6141 (yagF) G6141-MONOMER (CP4-6 prophage; predicted dehydratase)
   *in cand* 0.9995 0.9989 G7910 (yjhG) G7910-MONOMER (KpLE2 phage-like element; predicted dehydratase)

- ILEUSYN-PWY (isoleucine biosynthesis I (from threonine)) (degree of match pw to cand: 0.364, degree of match cand to pw: 0.500, average score: 0.973)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9988 EG10496 (ilvD) DIHYDROXYACIDDEHYDRAT-MONOMER (IlvD)
             0.9956 0.9883 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.9993 0.9983 EG10495 (ilvC) KETOLREDUCTOISOM-MONOMER (IlvC)
   *in cand* 0.9995 0.9988 EG10499 (ilvH) ACETOLACTSYNIII-HCHAIN-MONOMER (IlvH)
   *in cand* 0.9995 0.9990 EG10500 (ilvI) ACETOLACTSYNIII-ICHAIN-MONOMER (IlvI)
             0.9991 0.9982 EG10502 (ilvN) SMALLILVN-MONOMER (IlvN)
   *in cand* 0.9996 0.9990 EG10494 (ilvB) LARGEILVB-MONOMER (IlvB)
             0.7139 0.1390 EG10501 (ilvM) SMALLILVM-MONOMER (IlvM)
                NIL    NIL EG10498 (ilvG_2) LARGEILVG-MONOMER (acetolactate synthase II, large subunit, C-ter fragment (pseudogene))
                NIL    NIL G8221 (ilvG_1) G8221-MONOMER (acetolactate synthase II, large subunit, N-ter fragment (pseudogene))
             0.9833 0.9323 EG10493 (ilvA) THREDEHYDSYN-MONOMER (IlvA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9988 EG10257 (edd) PGLUCONDEHYDRAT-MONOMER (phosphogluconate dehydratase)
   *in cand* 0.9995 0.9988 EG11583 (gcl) GLYOCARBOLIG-MONOMER (Gcl)
   *in cand* 0.9996 0.9990 G6141 (yagF) G6141-MONOMER (CP4-6 prophage; predicted dehydratase)
   *in cand* 0.9995 0.9989 G7910 (yjhG) G7910-MONOMER (KpLE2 phage-like element; predicted dehydratase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10499 EG10500 (centered at EG10499)
EG10257 (centered at EG10257)
EG10494 (centered at EG10494)
EG10496 (centered at EG10496)
EG11583 (centered at EG11583)
G6141 (centered at G6141)
G7910 (centered at G7910)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7910   G6141   EG11583   EG10500   EG10499   EG10496   EG10494   EG10257   
355/623347/623322/623387/623410/623401/623344/623388/623
AAEO224324:0:Tyes261261009812610261
AAUR290340:2:Tyes210021003083209920980-2100
AAVE397945:0:Tyes731731-158115800-1266
ABAC204669:0:Tyes22--0212
ABAU360910:0:Tyes--2357235723560--
ABOR393595:0:Tyes003103103112173-0
ABUT367737:0:Tyes942942-019420-
ACAU438753:0:Tyes-0210398398221469831031
ACEL351607:0:Tyes00112-10
ACRY349163:8:Tyes-201368923792378582-0
ADEH290397:0:Tyes21542154110215412154
AEHR187272:0:Tyes11281128--1250-1128
AFER243159:0:Tyes00-8748739578740
AFUL224325:0:Tyes0069869869706980
AHYD196024:0:Tyes--584584586377537770
AMAR329726:9:Tyes101610169589580-9581016
AMET293826:0:Tyes7530-28362839296828542968
ANAE240017:0:Tyes14041404--01404--
APER272557:0:Tyes00-----0
APLE416269:0:Tyes--6306306310--
APLE434271:0:Tno--59859859902-
ASAL382245:5:Tyes-3851315931593158303851
ASP1667:3:Tyes221160102-2
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