CANDIDATE ID: 254

CANDIDATE ID: 254

NUMBER OF GENES: 8
AVERAGE SCORE:    9.9934793e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    7.5000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- M004 (rpe) (b3386)
   Products of gene:
     - RIBULP3EPIM-MONOMER (ribulose phosphate 3-epimerase)
       Reactions:
        D-ribulose-5-phosphate  =  D-xylulose-5-phosphate
         In pathways
         PWY-5257 (PWY-5257)
         PENTOSE-P-PWY (pentose phosphate pathway)
         PHOTOALL-PWY (PHOTOALL-PWY)
         DARABCAT-PWY (DARABCAT-PWY)
         RIBITOLUTIL-PWY (RIBITOLUTIL-PWY)
         P122-PWY (P122-PWY)
         P21-PWY (P21-PWY)
         PWY-1861 (PWY-1861)
         P185-PWY (P185-PWY)
         P124-PWY (P124-PWY)
         NONOXIPENT-PWY (pentose phosphate pathway (non-oxidative branch))
         PWY-5723 (PWY-5723)
         CALVIN-PWY (CALVIN-PWY)

- G7168 (arnA) (b2255)
   Products of gene:
     - G7168-MONOMER (fused UDP-L-Ara4N formyltransferase and UDP-GlcA C-4''-decarboxylase)
     - CPLX0-7718 (UDP-L-Ara4N formyltransferase / UDP-GlcA C-4"-decarboxylase)
       Reactions:
        UDP-4-amino-4-deoxy-beta-L-arabinopyranose + 10-formyl-tetrahydrofolate  ->  UDP-4-deoxy-4-formamido-beta-L-arabinopyranose + tetrahydrofolate + 3 H+
         In pathways
         PWY0-1338 (biosynthesis of  4-amino-4-deoxy-L-arabinose-modified lipid A)
        UDP-D-glucuronate + NAD+  ->  UDP-beta-L-threo-pentapyranos-4-ulose + CO2 + NADH
         In pathways
         PWY0-1338 (biosynthesis of  4-amino-4-deoxy-L-arabinose-modified lipid A)

- EG12163 (rsmB) (b3289)
   Products of gene:
     - EG12163-MONOMER (16S rRNA m5C967 methyltransferase)
       Reactions:
        cytosine967 in 16S rRNA + S-adenosyl-L-methionine  ->  5-methylcytosine967 in 16S rRNA + S-adenosyl-L-homocysteine

- EG11957 (alsE) (b4085)
   Products of gene:
     - EG11957-MONOMER (allulose-6-phosphate 3-epimerase)
       Reactions:
        D-allulose-6-phosphate  ->  D-fructose-6-phosphate
         In pathways
         PWY0-44 (D-allose degradation)

- EG11440 (def) (b3287)
   Products of gene:
     - EG11440-MONOMER (peptide deformylase)
       Reactions:
        formyl-L-methionyl peptide + H2O  ->  methionyl peptide + formate + H+

- EG11268 (fmt) (b3288)
   Products of gene:
     - EG11268-MONOMER (10-formyltetrahydrofolate:L-methionyl-tRNAfMet N-formyltransferase)
       Reactions:
        L-methionyl-tRNAfmet + 10-formyl-tetrahydrofolate + H2O  ->  N-formyl-L-methionyl-tRNAfmet + tetrahydrofolate

- EG10763 (priA) (b3935)
   Products of gene:
     - EG10763-MONOMER (primosome factor N')
     - CPLX0-3922 (primosome)

- EG10004 (dfp) (b3639)
   Products of gene:
     - EG10004-MONOMER (Dfp)
     - CPLX0-341 (fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase)
       Reactions:
        D-4'-phosphopantothenate + L-cysteine + CTP  ->  diphosphate + CMP + R-4'-phosphopantothenoyl-L-cysteine + H+
         In pathways
         PANTOSYN-PWY (pantothenate and coenzyme A biosynthesis I)
         PWY-4221 (PWY-4221)
         PWY-4242 (PWY-4242)
         COA-PWY (coenzyme A biosynthesis)
        R-4'-phosphopantothenoyl-L-cysteine + H+  ->  4'-phosphopantetheine + CO2
         In pathways
         PANTOSYN-PWY (pantothenate and coenzyme A biosynthesis I)
         PWY-4221 (PWY-4221)
         PWY-4242 (PWY-4242)
         COA-PWY (coenzyme A biosynthesis)



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ORGANISMS CONTAINING AT LEAST 7 GENES FROM THE GROUP:

Total number of orgs: 267
Effective number of orgs (counting one per cluster within 468 clusters): 186

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM47
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317588
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329538
YPES386656 ncbi Yersinia pestis Pestoides F8
YPES377628 ncbi Yersinia pestis Nepal5168
YPES360102 ncbi Yersinia pestis Antiqua8
YPES349746 ncbi Yersinia pestis Angola8
YPES214092 ncbi Yersinia pestis CO928
YPES187410 ncbi Yersinia pestis KIM 108
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80818
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A7
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110187
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103317
XCAM487884 Xanthomonas campestris pv. paulliniae7
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-107
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80047
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339137
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3067
XAUT78245 ncbi Xanthobacter autotrophicus Py27
VVUL216895 ncbi Vibrio vulnificus CMCP67
VVUL196600 ncbi Vibrio vulnificus YJ0167
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106338
VFIS312309 ncbi Vibrio fischeri ES1147
VCHO345073 ncbi Vibrio cholerae O3957
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169617
TTUR377629 ncbi Teredinibacter turnerae T79017
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB48
TSP1755 Thermoanaerobacter sp.8
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332238
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252598
TCRU317025 ncbi Thiomicrospira crunogena XCL-27
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen7
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT28
STHE292459 ncbi Symbiobacterium thermophilum IAM 148638
SSP94122 ncbi Shewanella sp. ANA-38
SSP644076 Silicibacter sp. TrichCH4B7
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)8
SSP321327 ncbi Synechococcus sp. JA-3-3Ab8
SSP292414 ncbi Ruegeria sp. TM10407
SSP1148 ncbi Synechocystis sp. PCC 68037
SSON300269 ncbi Shigella sonnei Ss0468
SSED425104 ncbi Shewanella sediminis HAW-EB38
SPRO399741 ncbi Serratia proteamaculans 5688
SPEA398579 ncbi Shewanella pealeana ATCC 7003457
SONE211586 ncbi Shewanella oneidensis MR-18
SMEL266834 ncbi Sinorhizobium meliloti 10217
SMED366394 ncbi Sinorhizobium medicae WSM4197
SLOI323850 ncbi Shewanella loihica PV-48
SLAC55218 Ruegeria lacuscaerulensis7
SHIGELLA ncbi Shigella flexneri 2a str. 2457T8
SHAL458817 ncbi Shewanella halifaxensis HAW-EB47
SGLO343509 ncbi Sodalis glossinidius morsitans8
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB8
SFLE373384 ncbi Shigella flexneri 5 str. 84018
SFLE198214 ncbi Shigella flexneri 2a str. 3018
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4768
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B678
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91508
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT188
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty28
SDYS300267 ncbi Shigella dysenteriae Sd1978
SDEN318161 ncbi Shewanella denitrificans OS2177
SDEG203122 ncbi Saccharophagus degradans 2-407
SBOY300268 ncbi Shigella boydii Sb2278
SBAL402882 ncbi Shewanella baltica OS1858
SBAL399599 ncbi Shewanella baltica OS1958
SALA317655 ncbi Sphingopyxis alaskensis RB22567
SACI56780 ncbi Syntrophus aciditrophicus SB7
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170297
RSOL267608 ncbi Ralstonia solanacearum GMI10008
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111707
RPAL316058 ncbi Rhodopseudomonas palustris HaA27
RPAL316056 ncbi Rhodopseudomonas palustris BisB187
RPAL316055 ncbi Rhodopseudomonas palustris BisA537
RMET266264 ncbi Ralstonia metallidurans CH348
REUT381666 ncbi Ralstonia eutropha H168
REUT264198 ncbi Ralstonia eutropha JMP1348
RDEN375451 ncbi Roseobacter denitrificans OCh 1147
PTHE370438 ncbi Pelotomaculum thermopropionicum SI8
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30008
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a8
PSTU379731 ncbi Pseudomonas stutzeri A15018
PPUT76869 ncbi Pseudomonas putida GB-18
PPUT351746 ncbi Pseudomonas putida F18
PPUT160488 ncbi Pseudomonas putida KT24408
PPRO298386 ncbi Photobacterium profundum SS97
PMUL272843 ncbi Pasteurella multocida multocida Pm707
PMEN399739 ncbi Pseudomonas mendocina ymp8
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO18
PING357804 ncbi Psychromonas ingrahamii 378
PFLU220664 ncbi Pseudomonas fluorescens Pf-58
PFLU216595 ncbi Pseudomonas fluorescens SBW258
PFLU205922 ncbi Pseudomonas fluorescens Pf0-18
PENT384676 ncbi Pseudomonas entomophila L488
PCAR338963 ncbi Pelobacter carbinolicus DSM 23808
PATL342610 ncbi Pseudoalteromonas atlantica T6c8
PARC259536 ncbi Psychrobacter arcticus 273-47
PAER208964 ncbi Pseudomonas aeruginosa PAO18
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA148
OIHE221109 ncbi Oceanobacillus iheyensis HTE8317
OANT439375 ncbi Ochrobactrum anthropi ATCC 491887
NOCE323261 ncbi Nitrosococcus oceani ATCC 197078
NMUL323848 ncbi Nitrosospira multiformis ATCC 251968
NMEN272831 ncbi Neisseria meningitidis FAM187
NMEN122587 ncbi Neisseria meningitidis Z24917
NMEN122586 ncbi Neisseria meningitidis MC587
NHAM323097 ncbi Nitrobacter hamburgensis X147
NGON242231 ncbi Neisseria gonorrhoeae FA 10907
NEUT335283 ncbi Nitrosomonas eutropha C918
NEUR228410 ncbi Nitrosomonas europaea ATCC 197187
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124447
MXAN246197 ncbi Myxococcus xanthus DK 16228
MTHE264732 ncbi Moorella thermoacetica ATCC 390738
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E7
MSP400668 ncbi Marinomonas sp. MWYL17
MSP266779 ncbi Chelativorans sp. BNC17
MPET420662 ncbi Methylibium petroleiphilum PM18
MMAG342108 ncbi Magnetospirillum magneticum AMB-18
MLOT266835 ncbi Mesorhizobium loti MAFF3030997
MFLA265072 ncbi Methylobacillus flagellatus KT8
MCAP243233 ncbi Methylococcus capsulatus Bath8
MAQU351348 ncbi Marinobacter aquaeolei VT88
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53347
LSAK314315 ncbi Lactobacillus sakei sakei 23K7
LPNE400673 ncbi Legionella pneumophila Corby7
LPNE297246 ncbi Legionella pneumophila Paris7
LPNE297245 ncbi Legionella pneumophila Lens7
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 17
LMON265669 ncbi Listeria monocytogenes 4b F23657
LMON169963 ncbi Listeria monocytogenes EGD-e7
LINN272626 ncbi Listeria innocua Clip112627
LCHO395495 ncbi Leptothrix cholodnii SP-67
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785788
JSP375286 ncbi Janthinobacterium sp. Marseille8
ILOI283942 ncbi Idiomarina loihiensis L2TR8
HSOM228400 ncbi Haemophilus somnus 23367
HSOM205914 ncbi Haemophilus somnus 129PT7
HNEP81032 Hyphomonas neptunium7
HMOD498761 ncbi Heliobacterium modesticaldum Ice17
HINF71421 ncbi Haemophilus influenzae Rd KW207
HINF374930 ncbi Haemophilus influenzae PittEE7
HINF281310 ncbi Haemophilus influenzae 86-028NP7
HHAL349124 ncbi Halorhodospira halophila SL18
HDUC233412 ncbi Haemophilus ducreyi 35000HP7
HCHE349521 ncbi Hahella chejuensis KCTC 23968
HARS204773 ncbi Herminiimonas arsenicoxydans7
GURA351605 ncbi Geobacter uraniireducens Rf48
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-28
GSUL243231 ncbi Geobacter sulfurreducens PCA8
GMET269799 ncbi Geobacter metallireducens GS-158
GKAU235909 ncbi Geobacillus kaustophilus HTA4268
GBET391165 ncbi Granulibacter bethesdensis CGDNIH17
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250177
ESP42895 Enterobacter sp.8
EFER585054 ncbi Escherichia fergusonii ATCC 354698
ECOO157 ncbi Escherichia coli O157:H7 EDL9338
ECOL83334 Escherichia coli O157:H78
ECOL585397 ncbi Escherichia coli ED1a8
ECOL585057 ncbi Escherichia coli IAI398
ECOL585056 ncbi Escherichia coli UMN0268
ECOL585055 ncbi Escherichia coli 559898
ECOL585035 ncbi Escherichia coli S888
ECOL585034 ncbi Escherichia coli IAI18
ECOL481805 ncbi Escherichia coli ATCC 87398
ECOL469008 ncbi Escherichia coli BL21(DE3)8
ECOL439855 ncbi Escherichia coli SMS-3-58
ECOL413997 ncbi Escherichia coli B str. REL6068
ECOL409438 ncbi Escherichia coli SE118
ECOL405955 ncbi Escherichia coli APEC O18
ECOL364106 ncbi Escherichia coli UTI898
ECOL362663 ncbi Escherichia coli 5368
ECOL331111 ncbi Escherichia coli E24377A8
ECOL316407 ncbi Escherichia coli K-12 substr. W31108
ECOL199310 ncbi Escherichia coli CFT0738
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10438
DRED349161 ncbi Desulfotomaculum reducens MI-18
DPSY177439 ncbi Desulfotalea psychrophila LSv548
DOLE96561 ncbi Desulfococcus oleovorans Hxd38
DHAF138119 ncbi Desulfitobacterium hafniense Y517
DARO159087 ncbi Dechloromonas aromatica RCB7
CVIO243365 ncbi Chromobacterium violaceum ATCC 124728
CSP78 Caulobacter sp.7
CSAL290398 ncbi Chromohalobacter salexigens DSM 30437
CPSY167879 ncbi Colwellia psychrerythraea 34H7
CPER289380 ncbi Clostridium perfringens SM1018
CPER195103 ncbi Clostridium perfringens ATCC 131247
CPER195102 ncbi Clostridium perfringens 138
CNOV386415 ncbi Clostridium novyi NT8
CJAP155077 Cellvibrio japonicus7
CDIF272563 ncbi Clostridium difficile 6308
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C7
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1117
CBUR360115 ncbi Coxiella burnetii RSA 3317
CBUR227377 ncbi Coxiella burnetii RSA 4937
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto7
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6578
CBOT498213 ncbi Clostridium botulinum B1 str. Okra8
CBOT441772 ncbi Clostridium botulinum F str. Langeland8
CBOT441771 ncbi Clostridium botulinum A str. Hall7
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193977
CBOT36826 Clostridium botulinum A7
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80528
CAULO ncbi Caulobacter crescentus CB157
CACE272562 ncbi Clostridium acetobutylicum ATCC 8248
BWEI315730 ncbi Bacillus weihenstephanensis KBAB48
BVIE269482 ncbi Burkholderia vietnamiensis G48
BTRI382640 ncbi Bartonella tribocorum CIP 1054767
BTHU412694 ncbi Bacillus thuringiensis Al Hakam8
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-278
BTHA271848 ncbi Burkholderia thailandensis E2648
BSUI470137 ncbi Brucella suis ATCC 234457
BSUI204722 ncbi Brucella suis 13307
BSUB ncbi Bacillus subtilis subtilis 1688
BSP376 Bradyrhizobium sp.8
BSP36773 Burkholderia sp.8
BPUM315750 ncbi Bacillus pumilus SAFR-0328
BPSE320373 ncbi Burkholderia pseudomallei 6688
BPSE320372 ncbi Burkholderia pseudomallei 1710b8
BPSE272560 ncbi Burkholderia pseudomallei K962438
BPET94624 Bordetella petrii7
BPER257313 ncbi Bordetella pertussis Tohama I7
BPAR257311 ncbi Bordetella parapertussis 128227
BOVI236 Brucella ovis7
BMEL359391 ncbi Brucella melitensis biovar Abortus 23087
BMAL320389 ncbi Burkholderia mallei NCTC 102478
BMAL320388 ncbi Burkholderia mallei SAVP18
BMAL243160 ncbi Burkholderia mallei ATCC 233448
BLIC279010 ncbi Bacillus licheniformis ATCC 145808
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1107
BHEN283166 ncbi Bartonella henselae Houston-18
BHAL272558 ncbi Bacillus halodurans C-1257
BCLA66692 ncbi Bacillus clausii KSM-K167
BCER572264 ncbi Bacillus cereus 03BB1028
BCER405917 Bacillus cereus W8
BCER315749 ncbi Bacillus cytotoxicus NVH 391-988
BCER288681 ncbi Bacillus cereus E33L8
BCER226900 ncbi Bacillus cereus ATCC 145798
BCEN331272 ncbi Burkholderia cenocepacia HI24248
BCEN331271 ncbi Burkholderia cenocepacia AU 10548
BCAN483179 ncbi Brucella canis ATCC 233657
BBRO257310 ncbi Bordetella bronchiseptica RB507
BBAC360095 ncbi Bartonella bacilliformis KC5837
BANT592021 ncbi Bacillus anthracis A02488
BANT568206 ncbi Bacillus anthracis CDC 6848
BANT261594 ncbi Bacillus anthracis Ames Ancestor8
BANT260799 ncbi Bacillus anthracis Sterne8
BAMY326423 ncbi Bacillus amyloliquefaciens FZB428
BAMB398577 ncbi Burkholderia ambifaria MC40-68
BAMB339670 ncbi Burkholderia ambifaria AMMD8
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9417
ASP76114 ncbi Aromatoleum aromaticum EbN17
ASP62977 ncbi Acinetobacter sp. ADP17
ASP62928 ncbi Azoarcus sp. BH728
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4497
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL037
APLE416269 ncbi Actinobacillus pleuropneumoniae L207
AORE350688 ncbi Alkaliphilus oremlandii OhILAs8
AMET293826 ncbi Alkaliphilus metalliredigens QYMF8
AHYD196024 Aeromonas hydrophila dhakensis8
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232708
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-18
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C7
ACRY349163 ncbi Acidiphilium cryptum JF-57
ACAU438753 ncbi Azorhizobium caulinodans ORS 5717
ABOR393595 ncbi Alcanivorax borkumensis SK27
ABAU360910 ncbi Bordetella avium 197N7
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3458


Names of the homologs of the genes in the group in each of these orgs
  M004   G7168   EG12163   EG11957   EG11440   EG11268   EG10763   EG10004   
ZMOB264203 ZMO0018ZMO0017ZMO0018ZMO0813ZMO0811ZMO1921ZMO1190
YPSE349747 YPSIP31758_3962YPSIP31758_1727YPSIP31758_3884YPSIP31758_3962YPSIP31758_3882YPSIP31758_3883YPSIP31758_0116YPSIP31758_0060
YPSE273123 YPTB3746YPTB2328YPTB3667YPTB3746YPTB3665YPTB3666YPTB0101YPTB0045
YPES386656 YPDSF_0082YPDSF_0730YPDSF_0162YPDSF_0082YPDSF_0164YPDSF_0163YPDSF_3797YPDSF_3857
YPES377628 YPN_3910YPN_1874YPN_3829YPN_3910YPN_3827YPN_3828YPN_3744YPN_3802
YPES360102 YPA_3314YPA_1764YPA_3233YPA_3314YPA_3231YPA_3232YPA_0259YPA_3494
YPES349746 YPANGOLA_A3723YPANGOLA_A2610YPANGOLA_A0613YPANGOLA_A3723YPANGOLA_A0615YPANGOLA_A0614YPANGOLA_A3812YPANGOLA_A0054
YPES214092 YPO0155YPO2420YPO0240YPO0155YPO0242YPO0241YPO0110YPO0048
YPES187410 Y3938Y1919Y4021Y3938Y4023Y4022Y0298Y0093
YENT393305 YE3971YE2190YE3891YE3971YE3889YE3890YE0108YE0062
XORY360094 XOOORF_0822XOOORF_0698XOOORF_0822XOOORF_0696XOOORF_0697XOOORF_0679XOOORF_4882
XORY342109 XOO3827XOO0548XOO3827XOO0546XOO0547XOO0529XOO0463
XORY291331 XOO4052XOO0587XOO4052XOO0585XOO0586XOO0567XOO0496
XCAM487884 XCC-B100_0491XCC-B100_3928XCC-B100_0491XCC-B100_3930XCC-B100_3929XCC-B100_3947XCC-B100_4043
XCAM316273 XCAORF_4051XCAORF_0559XCAORF_4051XCAORF_0556XCAORF_0558XCAORF_0536XCAORF_0430
XCAM314565 XC_0469XC_3817XC_0469XC_3819XC_3818XC_3836XC_3943
XCAM190485 XCC0455XCC3747XCC0455XCC3749XCC3748XCC3765XCC3859
XAXO190486 XAC0472XAC3799XAC0472XAC3801XAC3800XAC3818XAC3914
XAUT78245 XAUT_1911XAUT_0941XAUT_1911XAUT_3305XAUT_3304XAUT_2053XAUT_0078
VVUL216895 VV1_1386VV1_1047VV1_1046VV1_1048VV1_1047VV1_1359VV1_0828
VVUL196600 VV2985VV3226VV3227VV3225VV3226VV3012VV0283
VPAR223926 VP2741VP3043VP3044VP2741VP3042VP3043VP0253VP0181
VFIS312309 VF2288VF2545VF2288VF2543VF2544VF2274VF0125
VCHO345073 VC0395_A2202VC0395_A2474VC0395_A2475VC0395_A2473VC0395_A2474VC0395_A2251VC0395_A2595
VCHO VC2625VC0045VC0044VC0046VC0045VC2678VC0215
TTUR377629 TERTU_3138TERTU_0035TERTU_3138TERTU_0037TERTU_0036TERTU_3589TERTU_0185
TTEN273068 TTE1498TTE1506TTE1503TTE1498TTE1507TTE1506TTE1508TTE1509
TSP1755 TETH514_1747TETH514_1755TETH514_1752TETH514_1747TETH514_1757TETH514_1755TETH514_1758TETH514_1759
TPSE340099 TETH39_1311TETH39_1319TETH39_1316TETH39_1311TETH39_1320TETH39_1319TETH39_1321TETH39_1322
TDEN292415 TBD_2230TBD_0015TBD_0016TBD_2230TBD_0014TBD_0015TBD_2781TBD_2587
TCRU317025 TCR_0264TCR_0192TCR_0191TCR_0193TCR_0192TCR_1987TCR_1915
SWOL335541 SWOL_1223SWOL_1231SWOL_1228SWOL_1232SWOL_1231SWOL_1233SWOL_1235
STYP99287 STM3483STM2299STM3408STM3483STM3406STM3407STM4095STM3730
STHE292459 STH1355STH1344STH1349STH1355STH1343STH1344STH1342STH1341
SSP94122 SHEWANA3_3888SHEWANA3_0034SHEWANA3_0033SHEWANA3_3888SHEWANA3_0035SHEWANA3_0034SHEWANA3_3672SHEWANA3_3771
SSP644076 SCH4B_0617SCH4B_3469SCH4B_0617SCH4B_2759SCH4B_2756SCH4B_2543SCH4B_1303
SSP321332 CYB_2047CYB_1993CYB_1963CYB_2047CYB_2769CYB_1993CYB_2227CYB_0983
SSP321327 CYA_0084CYA_1691CYA_1094CYA_0084CYA_0120CYA_1691CYA_1466CYA_0161
SSP292414 TM1040_3710TM1040_0089TM1040_3710TM1040_2580TM1040_2577TM1040_2378TM1040_0458
SSP1148 SLL0807SLR0070SLR0679SLL0807SLR0070SLL0270SLL0250
SSON300269 SSO_3517SSO_2316SSO_3429SSO_3517SSO_3427SSO_3428SSO_4104SSO_3767
SSED425104 SSED_4259SSED_0924SSED_0033SSED_4259SSED_0035SSED_0034SSED_0534SSED_0384
SPRO399741 SPRO_4601SPRO_2156SPRO_4513SPRO_4601SPRO_4511SPRO_4512SPRO_4789SPRO_4843
SPEA398579 SPEA_0244SPEA_0030SPEA_0029SPEA_0031SPEA_0030SPEA_3778SPEA_3838
SONE211586 SO_0292SO_0031SO_0030SO_0292SO_0032SO_0031SO_4122SO_4249
SMEL266834 SMB20195SMC04090SMB20195SMC01101SMC01100SMC02496SMC01161
SMED366394 SMED_3927SMED_3191SMED_3927SMED_0054SMED_0055SMED_2927SMED_3566
SLOI323850 SHEW_0219SHEW_3737SHEW_3738SHEW_0219SHEW_3736SHEW_3737SHEW_0379SHEW_3482
SLAC55218 SL1157_0319SL1157_1320SL1157_0319SL1157_1868SL1157_1870SL1157_0217SL1157_0579
SHIGELLA RPEYBFGSUNRPEDEFFMTPRIADFP
SHAL458817 SHAL_4076SHAL_0026SHAL_0025SHAL_0027SHAL_0026SHAL_3863SHAL_0428
SGLO343509 SG2305SG1843SG2248SG2305SG2246SG2247SG2166SG2209
SFUM335543 SFUM_1951SFUM_3556SFUM_0150SFUM_1951SFUM_0147SFUM_0148SFUM_1434SFUM_0467
SFLE373384 SFV_3391SFV_2325SFV_3308SFV_3391SFV_3306SFV_3307SFV_4006SFV_3891
SFLE198214 AAN44866.1AAN43848.1AAN44783.1AAN44866.1AAN44781.1AAN44782.1AAN45446.1AAN45125.1
SENT454169 SEHA_C3789SEHA_C2539SEHA_C3712SEHA_C3789SEHA_C3710SEHA_C3711SEHA_C4427SEHA_C4056
SENT321314 SCH_3415SCH_3343SCH_3344SCH_3415SCH_3342SCH_3343SCH_3984SCH_3653
SENT295319 SPA3348SPA0564SPA3275SPA3348SPA3273SPA3274SPA3938SPA3582
SENT220341 STY4313STY2529STY4389STY4313STY4391STY4390STY3775STY4064
SENT209261 T4023T0564T4096T4023T4098T4097T3523T3788
SDYS300267 SDY_3693SDY_2451SDY_3465SDY_3693SDY_3463SDY_3464SDY_3802SDY_4069
SDEN318161 SDEN_0267SDEN_0022SDEN_0267SDEN_0024SDEN_0023SDEN_3356SDEN_0325
SDEG203122 SDE_0746SDE_0019SDE_0746SDE_0021SDE_0020SDE_2694SDE_3677
SBOY300268 SBO_3373SBO_2292SBO_3282SBO_3373SBO_3280SBO_3281SBO_3952SBO_3641
SBAL402882 SHEW185_4077SHEW185_0026SHEW185_0025SHEW185_4077SHEW185_0027SHEW185_0026SHEW185_0475SHEW185_0375
SBAL399599 SBAL195_4195SBAL195_0030SBAL195_0029SBAL195_4195SBAL195_0031SBAL195_0030SBAL195_0496SBAL195_0387
SALA317655 SALA_3128SALA_1047SALA_3128SALA_0251SALA_0249SALA_2279SALA_3182
SACI56780 SYN_01763SYN_02707SYN_02708SYN_01763SYN_02707SYN_01336SYN_02177
RSPH349101 RSPH17029_1430RSPH17029_1794RSPH17029_2765RSPH17029_2532RSPH17029_2535RSPH17029_2212RSPH17029_2252
RSOL267608 RSC2879RSC1319RSC0075RSC2879RSC0070RSC0072RSC3302RSC2461
RRUB269796 RRU_A2402RRU_A3660RRU_A2402RRU_A3350RRU_A3351RRU_A1222RRU_A3796
RPAL316058 RPB_3689RPB_0086RPB_3689RPB_0673RPB_0674RPB_0270RPB_0622
RPAL316056 RPC_1614RPC_0025RPC_1614RPC_0803RPC_0806RPC_0179RPC_0380
RPAL316055 RPE_1642RPE_0028RPE_0573RPE_0656RPE_0655RPE_0286RPE_0467
RMET266264 RMET_3176RMET_4827RMET_3562RMET_3176RMET_3565RMET_3564RMET_3490RMET_2887
REUT381666 H16_A3317H16_A1425H16_A3697H16_A3317H16_A3700H16_A3699H16_A3632H16_A3048
REUT264198 REUT_A3021REUT_B3974REUT_A3405REUT_A3021REUT_A3408REUT_A3407REUT_A3341REUT_A2747
RDEN375451 RD1_1105RD1_1339RD1_0653RD1_1337RD1_1339RD1_2081RD1_1200
PTHE370438 PTH_1779PTH_1790PTH_1788PTH_1779PTH_1791PTH_1790PTH_1792PTH_1793
PSYR223283 PSPTO_0566PSPTO_0178PSPTO_0179PSPTO_0566PSPTO_0177PSPTO_0178PSPTO_5137PSPTO_0085
PSYR205918 PSYR_4611PSYR_2691PSYR_0017PSYR_4611PSYR_0019PSYR_0018PSYR_0398PSYR_0221
PSTU379731 PST_0742PST_0020PST_0019PST_0742PST_0021PST_0020PST_0549PST_0472
PPUT76869 PPUTGB1_0446PPUTGB1_0083PPUTGB1_0082PPUTGB1_0446PPUTGB1_0084PPUTGB1_0083PPUTGB1_5138PPUTGB1_5336
PPUT351746 PPUT_0449PPUT_0083PPUT_0082PPUT_0449PPUT_0084PPUT_0083PPUT_4961PPUT_5195
PPUT160488 PP_0415PP_0067PP_0066PP_0415PP_0068PP_0067PP_5088PP_5285
PPRO298386 PBPRA0284PBPRA3580PBPRA3581PBPRA3579PBPRA3580PBPRA0257PBPRA0201
PMUL272843 PM1619PM1561PM1619PM1559PM1560PM1137PM1153
PMEN399739 PMEN_3999PMEN_0054PMEN_0053PMEN_3999PMEN_0055PMEN_0054PMEN_0536PMEN_4377
PLUM243265 PLU0086PLU2658PLU4697PLU0086PLU4695PLU4696PLU4759PLU4866
PING357804 PING_0167PING_0079PING_0080PING_0167PING_0078PING_0079PING_2869PING_0057
PFLU220664 PFL_5631PFL_3045PFL_0020PFL_5631PFL_0022PFL_0021PFL_0440PFL_6052
PFLU216595 PFLU5563PFLU3041PFLU0016PFLU5563PFLU0018PFLU0017PFLU0402PFLU5983
PFLU205922 PFL_5120PFL_2843PFL_0015PFL_5120PFL_0017PFL_0016PFL_0400PFL_5540
PENT384676 PSEEN0442PSEEN0024PSEEN0023PSEEN0442PSEEN0025PSEEN0024PSEEN0324PSEEN5432
PCAR338963 PCAR_0240PCAR_0244PCAR_0241PCAR_0240PCAR_0245PCAR_0244PCAR_0764PCAR_2011
PATL342610 PATL_0659PATL_0022PATL_0021PATL_0659PATL_0023PATL_0022PATL_4189PATL_0045
PARC259536 PSYC_1715PSYC_2139PSYC_2138PSYC_0030PSYC_2139PSYC_1727PSYC_1833
PAER208964 PA0607PA3554PA0017PA0607PA0019PA0018PA5050PA5320
PAER208963 PA14_07910PA14_18350PA14_00180PA14_07910PA14_00200PA14_00190PA14_66720PA14_70240
OIHE221109 OB1511OB1506OB1507OB1511OB1506OB1505OB1504
OANT439375 OANT_2376OANT_1089OANT_2376OANT_1344OANT_1345OANT_1100OANT_1319
NOCE323261 NOC_2492NOC_3015NOC_3016NOC_2492NOC_3014NOC_3015NOC_0028NOC_2992
NMUL323848 NMUL_A2371NMUL_A0393NMUL_A0392NMUL_A2371NMUL_A0394NMUL_A0393NMUL_A2327NMUL_A2137
NMEN272831 NMC1145NMC0104NMC1145NMC0102NMC0103NMC0491NMC1576
NMEN122587 NMA1413NMA0162NMA1413NMA0164NMA0163NMA0731NMA1916
NMEN122586 NMB_1244NMB_0112NMB_1244NMB_0110NMB_0111NMB_0551NMB_1658
NHAM323097 NHAM_2620NHAM_0197NHAM_2620NHAM_3693NHAM_3694NHAM_0535NHAM_0051
NGON242231 NGO0758NGO1869NGO0758NGO1871NGO1870NGO1437NGO1307
NEUT335283 NEUT_2096NEUT_0391NEUT_0390NEUT_2096NEUT_0392NEUT_0391NEUT_1682NEUT_0783
NEUR228410 NE2148NE1971NE1972NE1970NE1971NE1505NE1463
NARO279238 SARO_0104SARO_3096SARO_0104SARO_2896SARO_2894SARO_2393SARO_0591
MXAN246197 MXAN_6297MXAN_1399MXAN_1401MXAN_6297MXAN_1430MXAN_1399MXAN_1428MXAN_4395
MTHE264732 MOTH_0914MOTH_0898MOTH_0900MOTH_0914MOTH_0897MOTH_0898MOTH_0896MOTH_0893
MSUC221988 MS2330MS2203MS2330MS2201MS2202MS0449MS1938
MSP400668 MMWYL1_1057MMWYL1_0015MMWYL1_1057MMWYL1_0017MMWYL1_0016MMWYL1_4126MMWYL1_0623
MSP266779 MESO_0005MESO_3418MESO_0005MESO_0394MESO_0393MESO_3213MESO_4055
MPET420662 MPE_A3466MPE_A0284MPE_A0272MPE_A2786MPE_A0283MPE_A0284MPE_A0133MPE_A2571
MMAG342108 AMB1379AMB0242AMB0147AMB1379AMB0243AMB0242AMB4253AMB0202
MLOT266835 MLR4760MLR4098MLR4760MLL4855MLL4854MLL4071MLR3167
MFLA265072 MFLA_2472MFLA_0186MFLA_0184MFLA_2472MFLA_0187MFLA_0186MFLA_2672MFLA_0314
MCAP243233 MCA_2582MCA_2844MCA_2845MCA_2582MCA_2843MCA_2844MCA_2594MCA_2784
MAQU351348 MAQU_3515MAQU_0042MAQU_0041MAQU_3515MAQU_0043MAQU_0042MAQU_0822MAQU_3563
LWEL386043 LWE1837LWE1842LWE1841LWE1837LWE1842LWE1843LWE1844
LSAK314315 LSA0694LSA0689LSA0690LSA0694LSA0689LSA0688LSA0687
LPNE400673 LPC_2628LPC_0548LPC_0549LPC_0547LPC_0548LPC_3151LPC_1990
LPNE297246 LPP0721LPP2647LPP2646LPP2648LPP2647LPP2924LPP2552
LPNE297245 LPL0701LPL2517LPL2516LPL2518LPL2517LPL2778LPL2408
LPNE272624 LPG0664LPG2594LPG2593LPG2595LPG2594LPG2866LPG2488
LMON265669 LMOF2365_1846LMOF2365_1851LMOF2365_1850LMOF2365_1846LMOF2365_1851LMOF2365_1852LMOF2365_1853
LMON169963 LMO1818LMO1823LMO1822LMO1818LMO1823LMO1824LMO1825
LINN272626 LIN1932LIN1937LIN1936LIN1932LIN1937LIN1938LIN1939
LCHO395495 LCHO_3899LCHO_0351LCHO_4003LCHO_0350LCHO_0351LCHO_3523LCHO_2645
KPNE272620 GKPORF_B3098GKPORF_B3189GKPORF_B3029GKPORF_B3098GKPORF_B3027GKPORF_B3028GKPORF_B3575GKPORF_B3342
JSP375286 MMA_0237MMA_0144MMA_0158MMA_0237MMA_0143MMA_0144MMA_3606MMA_0826
ILOI283942 IL2324IL0017IL0016IL2324IL0018IL0017IL2461IL0239
HSOM228400 HSM_0042HSM_1932HSM_0559HSM_1934HSM_1933HSM_1054HSM_0008
HSOM205914 HS_0175HS_0039HS_0175HS_0041HS_0040HS_1123HS_0143
HNEP81032 HNE_3370HNE_0513HNE_3370HNE_0512HNE_0513HNE_1896HNE_3268
HMOD498761 HM1_2140HM1_2133HM1_2140HM1_2132HM1_2133HM1_2131HM1_2129
HINF71421 HI_0566HI_0624HI_0566HI_0622HI_0623HI_0339HI_0953
HINF374930 CGSHIEE_00135CGSHIEE_09110CGSHIEE_00135CGSHIEE_09120CGSHIEE_09115CGSHIEE_01305CGSHIEE_07195
HINF281310 NTHI0698NTHI0723NTHI0698NTHI0725NTHI0724NTHI0458NTHI1126
HHAL349124 HHAL_1048HHAL_2322HHAL_2321HHAL_1048HHAL_2323HHAL_2322HHAL_2267HHAL_2299
HDUC233412 HD_1929HD_1992HD_1929HD_1889HD_2029HD_0623HD_0733
HCHE349521 HCH_06112HCH_00029HCH_00028HCH_06112HCH_00030HCH_00029HCH_05977HCH_01021
HARS204773 HEAR0202HEAR0133HEAR0202HEAR0118HEAR0119HEAR3385HEAR0843
GURA351605 GURA_0194GURA_3698GURA_0193GURA_0194GURA_0818GURA_0819GURA_0374GURA_2927
GTHE420246 GTNG_1031GTNG_1025GTNG_1026GTNG_1031GTNG_1024GTNG_1025GTNG_1023GTNG_1022
GSUL243231 GSU_3374GSU_0130GSU_3373GSU_3374GSU_0129GSU_0130GSU_0128GSU_1124
GMET269799 GMET_0067GMET_0883GMET_0066GMET_0067GMET_3338GMET_3339GMET_3337GMET_2673
GKAU235909 GK1178GK1172GK1173GK1178GK1171GK1172GK1170GK1169
GBET391165 GBCGDNIH1_2141GBCGDNIH1_1754GBCGDNIH1_2141GBCGDNIH1_0693GBCGDNIH1_0691GBCGDNIH1_2060GBCGDNIH1_0157
FPHI484022 FPHI_1467FPHI_1340FPHI_1467FPHI_0717FPHI_1814FPHI_0636FPHI_1904
ESP42895 ENT638_3799ENT638_2077ENT638_3720ENT638_3799ENT638_3718ENT638_3719ENT638_4038ENT638_0100
EFER585054 EFER_3352EFER_0914EFER_3272EFER_4285EFER_3270EFER_3271EFER_3837EFER_3930
ECOO157 RPEZ3513SUNRPEDEFFMTPRIADFP
ECOL83334 ECS4228ECS3143ECS4154ECS4228ECS4152ECS4153ECS4862ECS4514
ECOL585397 ECED1_4044ECED1_2721ECED1_3952ECED1_4819ECED1_3950ECED1_3951ECED1_4637ECED1_4323
ECOL585057 ECIAI39_3864ECIAI39_2402ECIAI39_3783ECIAI39_4509ECIAI39_3781ECIAI39_3782ECIAI39_3059ECIAI39_4157
ECOL585056 ECUMN_3844ECUMN_2596ECUMN_3762ECUMN_3844ECUMN_3760ECUMN_3761ECUMN_4465ECUMN_4154
ECOL585055 EC55989_3791EC55989_2501EC55989_3705EC55989_3791EC55989_3703EC55989_3704EC55989_4413EC55989_4104
ECOL585035 ECS88_3771ECS88_2404ECS88_3676ECS88_4585ECS88_3674ECS88_3675ECS88_4385ECS88_4053
ECOL585034 ECIAI1_3524ECIAI1_2331ECIAI1_3438ECIAI1_3524ECIAI1_3436ECIAI1_3437ECIAI1_4140ECIAI1_3810
ECOL481805 ECOLC_0327ECOLC_1394ECOLC_0425ECOLC_3941ECOLC_0427ECOLC_0426ECOLC_4083ECOLC_0072
ECOL469008 ECBD_0361ECBD_1404ECBD_0463ECBD_3945ECBD_0465ECBD_0464ECBD_4089ECBD_0087
ECOL439855 ECSMS35_3662ECSMS35_2409ECSMS35_3584ECSMS35_4551ECSMS35_3582ECSMS35_3583ECSMS35_4377ECSMS35_3974
ECOL413997 ECB_03238ECB_02181ECB_03139ECB_03957ECB_03137ECB_03138ECB_03820ECB_03496
ECOL409438 ECSE_3647ECSE_2514ECSE_3563ECSE_4383ECSE_3561ECSE_3562ECSE_4224ECSE_3919
ECOL405955 APECO1_3077APECO1_4306APECO1_3158APECO1_2365APECO1_3160APECO1_3159APECO1_2535APECO1_2822
ECOL364106 UTI89_C3884UTI89_C2537UTI89_C3733UTI89_C4681UTI89_C3731UTI89_C3732UTI89_C4520UTI89_C4183
ECOL362663 ECP_3471ECP_2298ECP_3376ECP_4327ECP_3374ECP_3375ECP_4144ECP_3737
ECOL331111 ECE24377A_3855ECE24377A_2550ECE24377A_3771ECE24377A_3855ECE24377A_3769ECE24377A_3770ECE24377A_4471ECE24377A_4140
ECOL316407 ECK3373:JW3349:B3386ECK2248:JW2249:B2255ECK3275:JW3250:B3289ECK4078:JW4046:B4085ECK3273:JW3248:B3287ECK3274:JW3249:B3288ECK3927:JW3906:B3935ECK3629:JW5642:B3639
ECOL199310 C4156C2797C4049C5091C4047C4048C4888C4463
ECAR218491 ECA4089ECA3144ECA4001ECA4089ECA3999ECA4000ECA4258ECA0144
DRED349161 DRED_1716DRED_1705DRED_1707DRED_1716DRED_1704DRED_1705DRED_1703DRED_1702
DPSY177439 DP0795DP0747DP0124DP0795DP0746DP0747DP2206DP1673
DOLE96561 DOLE_2229DOLE_2232DOLE_2231DOLE_2229DOLE_2233DOLE_2232DOLE_0025DOLE_1592
DHAF138119 DSY2683DSY2693DSY2692DSY2683DSY2694DSY2693DSY2727
DARO159087 DARO_3483DARO_0028DARO_3483DARO_0021DARO_0022DARO_0033DARO_3141
CVIO243365 CV_2182CV_0747CV_4262CV_2182CV_4265CV_4264CV_1124CV_3080
CSP78 CAUL_4780CAUL_4779CAUL_4780CAUL_4570CAUL_4568CAUL_0240CAUL_5070
CSAL290398 CSAL_2328CSAL_2869CSAL_2328CSAL_2867CSAL_2868CSAL_0603CSAL_2981
CPSY167879 CPS_0479CPS_0018CPS_0479CPS_0020CPS_0019CPS_4366CPS_0182
CPER289380 CPR_1707CPR_1714CPR_1712CPR_1707CPR_1715CPR_1714CPR_1716CPR_1717
CPER195103 CPF_1989CPF_1996CPF_1994CPF_1997CPF_1996CPF_1998CPF_1999
CPER195102 CPE1736CPE1743CPE1741CPE1736CPE1744CPE1743CPE1745CPE1746
CNOV386415 NT01CX_2237NT01CX_2244NT01CX_2242NT01CX_2237NT01CX_2245NT01CX_2244NT01CX_2246NT01CX_2247
CJAP155077 CJA_2666CJA_3580CJA_2666CJA_3582CJA_3581CJA_0407CJA_3523
CDIF272563 CD2575CD2584CD2581CD2575CD2585CD2584CD2586CD2587
CDES477974 DAUD_1586DAUD_1592DAUD_1591DAUD_1586DAUD_1592DAUD_1594DAUD_1595
CBUR434922 COXBU7E912_0103COXBU7E912_2096COXBU7E912_0205COXBU7E912_1053COXBU7E912_2096COXBU7E912_0044COXBU7E912_0950
CBUR360115 COXBURSA331_A2074COXBURSA331_A0090COXBURSA331_A2118COXBURSA331_A0945COXBURSA331_A0090COXBURSA331_A2014COXBURSA331_A1061
CBUR227377 CBU_1872CBU_1997CBU_1915CBU_0993CBU_1997CBU_1815CBU_0886
CBOT536232 CLM_2802CLM_2809CLM_2807CLM_2810CLM_2809CLM_2811CLM_2812
CBOT515621 CLJ_B2732CLJ_B2739CLJ_B2737CLJ_B2732CLJ_B2740CLJ_B2739CLJ_B2741CLJ_B2742
CBOT498213 CLD_2135CLD_2128CLD_2130CLD_2135CLD_2127CLD_2128CLD_2126CLD_2125
CBOT441772 CLI_2563CLI_2570CLI_2568CLI_2563CLI_2571CLI_2570CLI_2572CLI_2573
CBOT441771 CLC_2357CLC_2364CLC_2362CLC_2365CLC_2364CLC_2366CLC_2367
CBOT441770 CLB_2375CLB_2382CLB_2380CLB_2383CLB_2382CLB_2384CLB_2385
CBOT36826 CBO2502CBO2509CBO2507CBO2510CBO2509CBO2511CBO2512
CBEI290402 CBEI_1153CBEI_1146CBEI_1148CBEI_1153CBEI_1145CBEI_1146CBEI_1144CBEI_1143
CAULO CC0101CC0279CC0102CC0101CC0272CC0279CC3712
CACE272562 CAC1730CAC1723CAC1725CAC1730CAC1722CAC1723CAC1721CAC1720
BWEI315730 BCERKBAB4_3683BCERKBAB4_3689BCERKBAB4_3688BCERKBAB4_3683BCERKBAB4_3690BCERKBAB4_3689BCERKBAB4_3691BCERKBAB4_3692
BVIE269482 BCEP1808_0513BCEP1808_1789BCEP1808_3282BCEP1808_0513BCEP1808_3286BCEP1808_3285BCEP1808_0121BCEP1808_2592
BTRI382640 BT_1347BT_2570BT_1347BT_0079BT_0078BT_2473BT_0038
BTHU412694 BALH_3491BALH_3497BALH_3496BALH_3491BALH_3498BALH_3497BALH_3499BALH_3500
BTHU281309 BT9727_3601BT9727_3607BT9727_3606BT9727_3601BT9727_3608BT9727_3607BT9727_3609BT9727_3610
BTHA271848 BTH_I2907BTH_I2190BTH_I0132BTH_I2907BTH_I0128BTH_I0129BTH_I3303BTH_I0768
BSUI470137 BSUIS_A0888BSUIS_B1292BSUIS_A0888BSUIS_B1030BSUIS_B1029BSUIS_B1281BSUIS_B1059
BSUI204722 BR_0850BR_1814BR_0850BR_A1035BR_A1034BR_1804BR_A1064
BSUB BSU15790BSU15730BSU15740BSU15790BSU15720BSU15730BSU15710BSU15700
BSP376 BRADO2842BRADO2062BRADO0340BRADO2842BRADO0770BRADO0771BRADO0413BRADO0077
BSP36773 BCEP18194_A3623BCEP18194_A5163BCEP18194_A6474BCEP18194_A3623BCEP18194_A6478BCEP18194_A6477BCEP18194_A3293BCEP18194_A5846
BPUM315750 BPUM_1478BPUM_1472BPUM_1473BPUM_1755BPUM_1471BPUM_1472BPUM_1470BPUM_1469
BPSE320373 BURPS668_3554BURPS668_2240BURPS668_0155BURPS668_3554BURPS668_0150BURPS668_0151BURPS668_3961BURPS668_0965
BPSE320372 BURPS1710B_A3856BURPS1710B_A2606BURPS1710B_A0374BURPS1710B_A3856BURPS1710B_A0368BURPS1710B_A0369BURPS1710B_A0176BURPS1710B_A1179
BPSE272560 BPSL3048BPSL0122BPSL0125BPSL3048BPSL0121BPSL0122BPSL3390BPSL0904
BPET94624 BPET0322BPET4711BPET0322BPET4727BPET4726BPET0347BPET2816
BPER257313 BP3266BP0569BP3266BP0552BP0551BP3292BP1751
BPAR257311 BPP4154BPP0259BPP4154BPP0243BPP0244BPP4131BPP1982
BOVI236 GBOORF0873GBOORF1819GBOORF0873GBOORFA1069GBOORFA1068GBOORF1808GBOORFA1095
BMEL359391 BAB1_0869BAB1_1822BAB1_0869BAB2_0997BAB2_0996BAB1_1812BAB2_1024
BMAL320389 BMA10247_A1908BMA10247_1155BMA10247_2357BMA10247_A1908BMA10247_2352BMA10247_2353BMA10247_3023BMA10247_2114
BMAL320388 BMASAVP1_0642BMASAVP1_A1883BMASAVP1_A2801BMASAVP1_0642BMASAVP1_A2806BMASAVP1_A2805BMASAVP1_A3348BMASAVP1_A2660
BMAL243160 BMA_A0535BMA_1393BMA_0146BMA_A0535BMA_0142BMA_0143BMA_2963BMA_2244
BLIC279010 BL02305BL02298BL02299BL02305BL02297BL02298BL02296BL02295
BJAP224911 BLR2588BLR0579BLR5680BLL8109BLL8108BLL0445BLL0759
BHEN283166 BH09680BH00750BH15990BH09680BH00760BH00750BH15360BH00380
BHAL272558 BH2502BH2508BH2507BH2502BH2508BH2509BH2510
BCLA66692 ABC2313ABC2318ABC2317ABC2313ABC2318ABC2319ABC2320
BCER572264 BCA_3960BCA_3966BCA_3965BCA_3960BCA_3967BCA_3966BCA_3968BCA_3969
BCER405917 BCE_3902BCE_3908BCE_3907BCE_3902BCE_3910BCE_3908BCE_3911BCE_3912
BCER315749 BCER98_2512BCER98_2518BCER98_2517BCER98_2512BCER98_2519BCER98_2518BCER98_2520BCER98_2521
BCER288681 BCE33L3619BCE33L3625BCE33L3624BCE33L3619BCE33L3626BCE33L3625BCE33L3627BCE33L3628
BCER226900 BC_3858BC_3864BC_3863BC_3858BC_3865BC_3864BC_3866BC_3867
BCEN331272 BCEN2424_0536BCEN2424_1862BCEN2424_3123BCEN2424_0536BCEN2424_3127BCEN2424_3126BCEN2424_0112BCEN2424_2514
BCEN331271 BCEN_2569BCEN_6217BCEN_2509BCEN_2569BCEN_2513BCEN_2512BCEN_2943BCEN_1903
BCAN483179 BCAN_A0863BCAN_A1852BCAN_A0863BCAN_B1055BCAN_B1054BCAN_A1842BCAN_B1086
BBRO257310 BB4624BB0262BB4624BB0247BB0248BB4601BB2170
BBAC360095 BARBAKC583_0856BARBAKC583_0072BARBAKC583_0856BARBAKC583_1319BARBAKC583_1320BARBAKC583_0108BARBAKC583_1349
BANT592021 BAA_4022BAA_4028BAA_4027BAA_4022BAA_4029BAA_4028BAA_4030BAA_4031
BANT568206 BAMEG_0633BAMEG_0627BAMEG_0628BAMEG_0633BAMEG_0626BAMEG_0627BAMEG_0625BAMEG_0624
BANT261594 GBAA3998GBAA4004GBAA4003GBAA3998GBAA4005GBAA4004GBAA4006GBAA4007
BANT260799 BAS3711BAS3717BAS3716BAS3711BAS3718BAS3717BAS3719BAS3720
BAMY326423 RBAM_015620RBAM_015560RBAM_015570RBAM_015620RBAM_015550RBAM_015560RBAM_015540RBAM_015530
BAMB398577 BAMMC406_0465BAMMC406_1772BAMMC406_3061BAMMC406_0465BAMMC406_3065BAMMC406_3064BAMMC406_0111BAMMC406_2432
BAMB339670 BAMB_0441BAMB_1800BAMB_3178BAMB_0441BAMB_3182BAMB_3181BAMB_0102BAMB_2561
BABO262698 BRUAB1_0862BRUAB1_1794BRUAB1_0862BRUAB2_0975BRUAB2_0974BRUAB1_1784BRUAB2_1004
ASP76114 EBA4173EBA2954EBA2833EBB91EBA2954EBA2819EBA838
ASP62977 ACIAD0685ACIAD3638ACIAD0685ACIAD0211ACIAD3637ACIAD0409ACIAD3125
ASP62928 AZO3327AZO0100AZO3985AZO3327AZO0099AZO0100AZO3978AZO1138
ASAL382245 ASA_1129ASA_3309ASA_4142ASA_4140ASA_4141ASA_0128ASA_4230
APLE434271 APJL_1856APJL_1588APJL_1856APJL_1743APJL_1620APJL_1050APJL_2016
APLE416269 APL_1820APL_1560APL_1820APL_1711APL_1587APL_1032APL_1969
AORE350688 CLOS_1436CLOS_1428CLOS_1431CLOS_1436CLOS_1427CLOS_1428CLOS_1426CLOS_1425
AMET293826 AMET_2777AMET_2785AMET_2782AMET_2777AMET_2786AMET_2785AMET_2787AMET_2788
AHYD196024 AHA_3185AHA_0990AHA_0256AHA_3185AHA_0258AHA_0257AHA_4198AHA_0159
AFER243159 AFE_3086AFE_3004AFE_3003AFE_3086AFE_3005AFE_3004AFE_2449AFE_2675
AEHR187272 MLG_2834MLG_2627MLG_2626MLG_2834MLG_2628MLG_2627MLG_2496MLG_2847
ADEH290397 ADEH_3971ADEH_3969ADEH_3971ADEH_0725ADEH_3969ADEH_0727ADEH_2372
ACRY349163 ACRY_0827ACRY_2654ACRY_0022ACRY_0409ACRY_0410ACRY_1677ACRY_1725
ACAU438753 AZC_1810AZC_0797AZC_4698AZC_0798AZC_0797AZC_4144AZC_3913
ABOR393595 ABO_2042ABO_0129ABO_2042ABO_0131ABO_0130ABO_2241ABO_0213
ABAU360910 BAV3233BAV0228BAV3233BAV0202BAV0203BAV3210BAV1409
ABAC204669 ACID345_0074ACID345_4228ACID345_4229ACID345_0074ACID345_4287ACID345_4228ACID345_3774ACID345_3776


Organism features enriched in list (features available for 251 out of the 267 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000328764112
Disease:Bubonic_plague 0.006153166
Disease:Dysentery 0.006153166
Endospores:No 8.151e-2040211
Endospores:Yes 9.026e-84153
GC_Content_Range4:0-40 2.830e-1449213
GC_Content_Range4:40-60 1.097e-8129224
GC_Content_Range4:60-100 0.009614473145
GC_Content_Range7:0-30 0.00470331247
GC_Content_Range7:30-40 4.029e-1137166
GC_Content_Range7:50-60 1.148e-974107
GC_Content_Range7:60-70 0.001435572134
Genome_Size_Range5:0-2 9.644e-348155
Genome_Size_Range5:4-6 6.735e-25136184
Genome_Size_Range5:6-10 0.00740952847
Genome_Size_Range9:1-2 4.641e-258128
Genome_Size_Range9:2-3 0.000777237120
Genome_Size_Range9:3-4 0.00923154277
Genome_Size_Range9:4-5 3.225e-106996
Genome_Size_Range9:5-6 7.077e-126788
Genome_Size_Range9:6-8 0.00199502538
Gram_Stain:Gram_Neg 2.230e-16191333
Gram_Stain:Gram_Pos 0.000012643150
Habitat:Host-associated 0.000048667206
Habitat:Multiple 9.491e-6100178
Habitat:Specialized 0.00853121553
Habitat:Terrestrial 0.00088172231
Motility:No 1.203e-1821151
Motility:Yes 8.148e-17164267
Optimal_temp.:- 0.0077447123257
Optimal_temp.:25-30 0.00113751519
Optimal_temp.:35-37 0.00001461313
Oxygen_Req:Anaerobic 0.004802033102
Oxygen_Req:Facultative 3.229e-6112201
Pathogenic_in:Animal 0.00445903866
Pathogenic_in:No 0.007375085226
Shape:Coccobacillus 0.00125681011
Shape:Coccus 5.640e-101182
Shape:Rod 1.504e-25209347
Shape:Sphere 0.0019502219
Shape:Spiral 0.0002426534
Temp._range:Hyperthermophilic 0.0000315123
Temp._range:Mesophilic 0.0072825214473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 113
Effective number of orgs (counting one per cluster within 468 clusters): 97

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSOL273057 ncbi Sulfolobus solfataricus P20
SMAR399550 ncbi Staphylothermus marinus F11
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99411
RTYP257363 ncbi Rickettsia typhi Wilmington1
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP117 Pirellula sp.1
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT31
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE51
NSP35761 Nocardioides sp.1
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101521
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-21
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54561
HACI382638 ncbi Helicobacter acinonychis Sheeba1
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
DRAD243230 ncbi Deinococcus radiodurans R11
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/31
BTUR314724 ncbi Borrelia turicatae 91E1351
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH1
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B310
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40181
AAUR290340 ncbi Arthrobacter aurescens TC11


Names of the homologs of the genes in the group in each of these orgs
  M004   G7168   EG12163   EG11957   EG11440   EG11268   EG10763   EG10004   
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TPEN368408
TPAL243276 TP_0945
TLET416591 TLET_1626
TKOD69014 TK1935
TACI273075
STOK273063
SSOL273057
SMAR399550 SMAR_0376
SACI330779
RXYL266117 RXYL_1363
RTYP257363 RT0197
RAKA293614 A1C_01560
PTOR263820
PSP117 RB8418
PISL384616
PHOR70601 PH0851
PFUR186497 PF0666
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844 PAB0830
NSP35761 NOCA_2438
NSEN222891 NSE_0336
NPHA348780
NFAR247156 NFA36140
MTHE349307
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633 MYPE500
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MKAN190192 MK1539
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBAR269797
MART243272
MAEO419665
MACE188937
LXYL281090 LXX11140
LINT267671
LINT189518
LBOR355277
LBOR355276
LBIF456481
LBIF355278
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963 JHP0729
HPYL357544 HPAG1_0778
HPY HP0793
HMUK485914
HMAR272569
HBUT415426 HBUT_0511
HACI382638 HAC_0915
FNOD381764 FNOD_1467
ERUM302409 ERGA_CDS_00440
ERUM254945 ERWE_CDS_00450
DRAD243230 DR_1401
CTRA471473 CTLON_0147
CTRA471472 CTL0147
CSUL444179
CPNE182082 CPB0955
CPNE138677 CPJ0924
CPNE115713 CPN0924
CPNE115711 CP_0942
CMET456442
CMAQ397948
CKOR374847
CJEJ354242 CJJ81176_0476
CFEL264202
CCAV227941 CCA_00845
CABO218497 CAB810
BTUR314724 BT0812
BLON206672 BL1789
BHER314723 BH0812
BGAR290434
BBUR224326
BAFZ390236
AYEL322098
AURANTIMONAS
APER272557
ANAE240017
ALAI441768 ACL_0253
AFUL224325
ABUT367737 ABU_1700
AAUR290340 AAUR_1824


Organism features enriched in list (features available for 106 out of the 113 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0012548792
Arrangment:Pairs 0.007328012112
Arrangment:Singles 0.000473667286
Disease:Leptospirosis 0.001042744
Disease:Pharyngitis 0.000036978
Disease:bronchitis_and_pneumonitis 0.000036978
Endospores:No 1.416e-1372211
Endospores:Yes 0.0001810153
GC_Content_Range4:0-40 0.000147755213
GC_Content_Range4:60-100 0.000250913145
GC_Content_Range7:0-30 6.350e-82447
GC_Content_Range7:60-70 0.000167611134
Genome_Size_Range5:0-2 6.647e-2068155
Genome_Size_Range5:4-6 1.476e-117184
Genome_Size_Range5:6-10 0.0005978147
Genome_Size_Range9:0-1 5.379e-122127
Genome_Size_Range9:1-2 5.039e-947128
Genome_Size_Range9:4-5 0.0000527596
Genome_Size_Range9:5-6 1.155e-6288
Genome_Size_Range9:6-8 0.0033705138
Gram_Stain:Gram_Neg 0.000148644333
Gram_Stain:Gram_Pos 1.862e-78150
Habitat:Host-associated 0.003311249206
Habitat:Multiple 2.628e-99178
Habitat:Specialized 4.868e-62353
Optimal_temp.:- 0.000497732257
Optimal_temp.:100 0.005871733
Optimal_temp.:35-40 0.005871733
Optimal_temp.:37 0.003429129106
Optimal_temp.:85 0.001042744
Oxygen_Req:Anaerobic 7.357e-635102
Oxygen_Req:Facultative 0.000055020201
Pathogenic_in:Ruminant 0.005871733
Salinity:Extreme_halophilic 0.002626257
Shape:Irregular_coccus 3.191e-101517
Shape:Pleomorphic 0.005775358
Shape:Rod 2.395e-1231347
Shape:Sphere 3.073e-101619
Shape:Spiral 1.877e-61834
Temp._range:Hyperthermophilic 1.914e-101823
Temp._range:Mesophilic 0.000126772473
Temp._range:Thermophilic 0.00933311235



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 11
Effective number of orgs (counting one per cluster within 468 clusters): 11

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
BHEN283166 ncbi Bartonella henselae Houston-1 0.00026187848
SSP321327 ncbi Synechococcus sp. JA-3-3Ab 0.00122449508
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13) 0.00130979588
CNOV386415 ncbi Clostridium novyi NT 0.003664410898
DOLE96561 ncbi Desulfococcus oleovorans Hxd3 0.004460311168
PTHE370438 ncbi Pelotomaculum thermopropionicum SI 0.004590211208
CPER289380 ncbi Clostridium perfringens SM101 0.004964711318
AORE350688 ncbi Alkaliphilus oremlandii OhILAs 0.005674911508
BBAC360095 ncbi Bartonella bacilliformis KC583 0.00573667187
CPER195102 ncbi Clostridium perfringens 13 0.007826111978
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 33223 0.007931611998


Names of the homologs of the genes in the group in each of these orgs
  M004   G7168   EG12163   EG11957   EG11440   EG11268   EG10763   EG10004   
BHEN283166 BH09680BH00750BH15990BH09680BH00760BH00750BH15360BH00380
SSP321327 CYA_0084CYA_1691CYA_1094CYA_0084CYA_0120CYA_1691CYA_1466CYA_0161
SSP321332 CYB_2047CYB_1993CYB_1963CYB_2047CYB_2769CYB_1993CYB_2227CYB_0983
CNOV386415 NT01CX_2237NT01CX_2244NT01CX_2242NT01CX_2237NT01CX_2245NT01CX_2244NT01CX_2246NT01CX_2247
DOLE96561 DOLE_2229DOLE_2232DOLE_2231DOLE_2229DOLE_2233DOLE_2232DOLE_0025DOLE_1592
PTHE370438 PTH_1779PTH_1790PTH_1788PTH_1779PTH_1791PTH_1790PTH_1792PTH_1793
CPER289380 CPR_1707CPR_1714CPR_1712CPR_1707CPR_1715CPR_1714CPR_1716CPR_1717
AORE350688 CLOS_1436CLOS_1428CLOS_1431CLOS_1436CLOS_1427CLOS_1428CLOS_1426CLOS_1425
BBAC360095 BARBAKC583_0856BARBAKC583_0072BARBAKC583_0856BARBAKC583_1319BARBAKC583_1320BARBAKC583_0108BARBAKC583_1349
CPER195102 CPE1736CPE1743CPE1741CPE1736CPE1744CPE1743CPE1745CPE1746
TPSE340099 TETH39_1311TETH39_1319TETH39_1316TETH39_1311TETH39_1320TETH39_1319TETH39_1321TETH39_1322


Organism features enriched in list (features available for 11 out of the 11 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Gas_gangrene 0.000957523
Endospores:Yes 0.0001303653
Genome_Size_Range5:2-4 0.00126179197
Oxygen_Req:Anaerobic 0.00067517102
Temp._range:Thermophilic 0.0024623435



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2461860.5346
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951590.5276
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181700.5207
PWY-5918 (heme biosynthesis I)2721920.4933
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002040.4896
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861960.4779
AST-PWY (arginine degradation II (AST pathway))1201090.4735
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911960.4634
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491240.4573
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961970.4556
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162430.4456
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222450.4450
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901920.4403
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001960.4377
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911440.4372
TYRFUMCAT-PWY (tyrosine degradation I)1841400.4347
PWY-1269 (CMP-KDO biosynthesis I)3252060.4332
PWY-5194 (siroheme biosynthesis)3122000.4300
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251600.4293
PWY-5386 (methylglyoxal degradation I)3051960.4236
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761340.4220
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392100.4215
PWY-4041 (γ-glutamyl cycle)2791840.4202
CENTFERM-PWY (acetyl-CoA fermentation to butyrate I)2081500.4186
PWY0-862 (cis-dodecenoyl biosynthesis)3432110.4173
GLUTAMINDEG-PWY (glutamine degradation I)1911410.4161
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491690.4124
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491690.4124
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831360.4100
PWY-5913 (TCA cycle variation IV)3011910.4024
GLYCOLATEMET-PWY (glycolate and glyoxylate degradation I)2701770.4011



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7168   EG12163   EG11957   EG11440   EG11268   EG10763   EG10004   
M0040.9989870.9993160.9999910.9986760.9990840.9989560.999082
G71680.9997930.9990910.9997340.999910.999550.999156
EG121630.9993030.9998490.9999450.9995510.999306
EG119570.998650.9991550.9989230.998939
EG114400.9999890.9992350.999237
EG112680.9995410.999381
EG107630.999412
EG10004



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PAIRWISE BLAST SCORES:

  M004   G7168   EG12163   EG11957   EG11440   EG11268   EG10763   EG10004   
M0040.0f0-------
G7168-0.0f0---2.3e-31--
EG12163--0.0f0-----
EG119577.0e-34--0.0f0----
EG11440----0.0f0---
EG11268-----0.0f0--
EG10763------0.0f0-
EG10004-------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11268 EG11440 EG12163 (centered at EG11268)
M004 (centered at M004)
G7168 (centered at G7168)
EG11957 (centered at EG11957)
EG10763 (centered at EG10763)
EG10004 (centered at EG10004)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  M004   G7168   EG12163   EG11957   EG11440   EG11268   EG10763   EG10004   
403/623306/623396/623363/623378/623410/623413/623419/623
AAEO224324:0:Tyes264--26401087-155
AAUR290340:2:Tyes0-------
AAVE397945:0:Tyes0-4020-417841803965874
ABAC204669:0:Tyes04189419004250418937273729
ABAU360910:0:Tyes3040-2630400130171209
ABOR393595:0:Tyes1951-0195121215284
ABUT367737:0:Tyes----0---
ACAU438753:0:Tyes102803957-1033873152
ACEL351607:0:Tyes0--0---15
ACRY349163:8:Tyes807-2643039039116561706
ADEH290397:0:Tyes32803278-32800327821662
AEHR187272:0:Tyes3381311303381321310351
AFER243159:0:Tyes6305485476305495480221
AHYD196024:0:Tyes2949809912949939238940
ALAI441768:0:Tyes---0----
AMAR234826:0:Tyes---018---
AMAR329726:3:Tyes------0-
AMAR329726:9:Tyes1266-54461266---0
AMET293826:0:Tyes0850981011
AORE350688:0:Tyes1136112310
APHA212042:0:Tyes---01279---
APLE416269:0:Tyes829-5588297155860974
APLE434271:0:Tno853-57485373560701013
ASAL382245:5:Tyes97130623874-3872387303958
ASP1667:3:Tyes0------572
ASP232721:2:Tyes0-3438-360236043405631
ASP62928:0:Tyes32851394832850139411065
ASP62977:0:Tyes444-3174444031731852708
ASP76114:2:Tyes195312401167-1241124011600
AVAR240292:3:Tyes3856-360738560--2991
BABO262698:0:Tno----10-29
BABO262698:1:Tno0-9050--895-
BAMB339670:3:Tno350174831543503158315702534
BAMB398577:3:Tno361168529923612996299502362
BAMY326423:0:Tyes93492310
BANT260799:0:Tno06507689
BANT261594:2:Tno06507689
BANT568206:2:Tyes93492310
BANT592021:2:Tno06507689
BAPH198804:0:Tyes411--01--
BAPH372461:0:Tyes38---0---
BBAC264462:0:Tyes----10941-
BBAC360095:0:Tyes735-073511611162361190
BBRO257310:0:Tyes4421-1544210143981948
BCAN483179:0:Tno----10-32
BCAN483179:1:Tno0-9490--939-
BCEN331271:0:Tno-0------
BCEN331271:2:Tno669-60666961060910520
BCEN331272:3:Tyes424174730054243009300802398
BCER226900:1:Tyes06507689
BCER288681:0:Tno06507689
BCER315749:1:Tyes06507689
BCER405917:1:Tyes065086910
BCER572264:1:Tno06507689
BCIC186490:0:Tyes0---358357127144
BCLA66692:0:Tyes0540-567
BFRA272559:1:Tyes-810-809-81011800
BFRA295405:0:Tno-932-931-93212640
BHAL272558:0:Tyes0650-678
BHEN283166:0:Tyes877331438877343313780
BHER314723:0:Fyes-------0
BJAP224911:0:Fyes2163-1365277771577140319
BLIC279010:0:Tyes93492310
BLON206672:0:Tyes-----0--
BMAL243160:0:Tno0--0----
BMAL243160:1:Tno-11164-0125291868
BMAL320388:0:Tno0--0----
BMAL320388:1:Tno-0892-8978961423753
BMAL320389:0:Tyes0--0----
BMAL320389:1:Tyes-01171-116611671828932
BMEL224914:0:Tno----3031-0
BMEL224914:1:Tno905-0905----
BMEL359391:0:Tno----10-28
BMEL359391:1:Tno0-8710--861-
BOVI236:0:Tyes----10-27
BOVI236:1:Tyes0-8070--796-
BPAR257311:0:Tno3741-1637410137191661
BPER257313:0:Tyes2454-1724541024781077
BPET94624:0:Tyes0-4438044544453252514
BPSE272560:1:Tyes2944142944013286785
BPSE320372:1:Tno3545240619735451911920997
BPSE320373:1:Tno3283202853283013676793
BPUM315750:0:Tyes9342752310
BQUI283165:0:Tyes636--636343310440
BSP107806:2:Tyes41--4101--
BSP36773:2:Tyes339190432383393242324102607
BSP376:0:Tyes2609187524926096446453140
BSUB:0:Tyes93492310
BSUI204722:0:Tyes----10-30
BSUI204722:1:Tyes0-9320--922-
BSUI470137:0:Tno--256-1024529
BSUI470137:1:Tno0--0----
BTHA271848:1:Tno2729202742729013110637
BTHE226186:0:Tyes-3600--036002390968
BTHU281309:1:Tno06507689
BTHU412694:1:Tno06507689
BTRI382640:1:Tyes1168-19851168343319080
BTUR314724:0:Fyes-------0
BVIE269482:7:Tyes381164931283813132313102443
BWEI315730:4:Tyes06507689
BXEN266265:1:Tyes0--0----
CABO218497:0:Tyes------0-
CACE272562:1:Tyes1035102310
CAULO:0:Tyes017910172179-3665
CBEI290402:0:Tyes1035102310
CBLO203907:0:Tyes349--34910--
CBLO291272:0:Tno359---10-405
CBOT36826:1:Tno075-87910
CBOT441770:0:Tyes075-87910
CBOT441771:0:Tno075-87910
CBOT441772:1:Tno075087910
CBOT498213:1:Tno075087910
CBOT508765:1:Tyes1035-23-0
CBOT515621:2:Tyes075087910
CBOT536232:0:Tno075-87910
CBUR227377:1:Tyes9471070990-9810708930
CBUR360115:1:Tno187601919-80701818910
CBUR434922:2:Tno551961154-96319610866
CCAV227941:1:Tyes------0-
CCHL340177:0:Tyes0319948---6561451
CCON360104:2:Tyes848--8480---
CCUR360105:0:Tyes1131--11310---
CDES477974:0:Tyes0650-689
CDIF272563:1:Tyes09601091112
CDIP257309:0:Tyes-210---6
CEFF196164:0:Fyes0-1----7
CFET360106:0:Tyes0--0808---
CGLU196627:0:Tyes-210----
CHOM360107:1:Tyes734--7340---
CHUT269798:0:Tyes-861-895086118722278
CHYD246194:0:Tyes--0-3245
CJAP155077:0:Tyes2200-310722003109310803050
CJEI306537:0:Tyes0793-----6
CJEJ192222:0:Tyes0--0----
CJEJ195099:0:Tno0--0----
CJEJ354242:2:Tyes0-------
CJEJ360109:0:Tyes0--0----
CJEJ407148:0:Tno0--0----
CKLU431943:1:Tyes10-5-2310
CMIC31964:2:Tyes0------5
CMIC443906:2:Tyes0------5
CMUR243161:1:Tyes-652----0-
CNOV386415:0:Tyes075087910
CPEL335992:0:Tyes0--0141--86
CPER195102:1:Tyes075087910
CPER195103:0:Tno075-87910
CPER289380:3:Tyes075087910
CPHY357809:0:Tyes07-0879-
CPNE115711:1:Tyes------0-
CPNE115713:0:Tno------0-
CPNE138677:0:Tno------0-
CPNE182082:0:Tno------0-
CPRO264201:0:Fyes-0-372-0840-
CPSY167879:0:Tyes438-0438214217150
CRUT413404:0:Tyes894-85-7886150628
CSAL290398:0:Tyes1765-230617652304230502417
CSP501479:6:Fyes-------0
CSP501479:8:Fyes72017--198170-
CSP78:2:Tyes4576-457545764365436304867
CTEP194439:0:Tyes-1226391---9640
CTET212717:0:Tyes10-5-2310
CTRA471472:0:Tyes------0-
CTRA471473:0:Tno------0-
CVES412965:0:Tyes811--8117155690581
CVIO243365:0:Tyes1479036251479362836273942386
DARO159087:0:Tyes3495-7349501123152
DDES207559:0:Tyes26611-266101-26
DETH243164:0:Tyes----3201161-0
DGEO319795:1:Tyes---0---992
DHAF138119:0:Tyes010901110-44
DNOD246195:0:Tyes374-2-01194648
DOLE96561:0:Tyes22322235223422322236223501585
DPSY177439:2:Tyes694646069464564621401595
DRAD243230:3:Tyes---0----
DRED349161:0:Tyes1435142310
DSHI398580:5:Tyes2867-2894-0217812836
DSP216389:0:Tyes----3811106092
DSP255470:0:Tno----3961273087
DVUL882:1:Tyes0831-0832831-819
ECAN269484:0:Tyes---60---
ECAR218491:0:Tyes40063028391740063915391641860
ECHA205920:0:Tyes0--0----
ECOL199310:0:Tno13370123022591228122920591642
ECOL316407:0:Tno16190171718051719171810681363
ECOL331111:6:Tno12510116612511164116518431530
ECOL362663:0:Tno11800108720211085108618421441
ECOL364106:1:Tno13370118921251187118819671636
ECOL405955:2:Tyes12270114019641138113917911486
ECOL409438:6:Tyes11630107919281077107817561436
ECOL413997:0:Tno10790981181497998016671333
ECOL439855:4:Tno11960111820481116111718891506
ECOL469008:0:Tno2681333369384537137039980
ECOL481805:0:Tno2501338348387835034940290
ECOL585034:0:Tno11760108911761087108817691453
ECOL585035:0:Tno13320123821061236123719151605
ECOL585055:0:Tno12740118712741185118618821573
ECOL585056:2:Tno12470116612471164116518561548
ECOL585057:0:Tno1483014032128140114026751764
ECOL585397:0:Tno13030121520631213121418831568
ECOL83334:0:Tno11210104711211045104617741408
ECOLI:0:Tno11450104718591045104617041405
ECOO157:0:Tno11340105811341056105717961432
EFAE226185:3:Tyes0540-56-
EFER585054:1:Tyes24280234933312347234828982984
ELIT314225:0:Tyes2128-18732128301351-
ERUM254945:0:Tyes----0---
ERUM302409:0:Tno----0---
ESP42895:1:Tyes37372002366037373658365939860
FALN326424:0:Tyes---0---5
FJOH376686:0:Tyes-0----33793362
FMAG334413:1:Tyes---102-10
FNOD381764:0:Tyes-------0
FNUC190304:0:Tyes0809-0-809-31
FPHI484022:1:Tyes865-73486584121901308
FRANT:0:Tno536-1095-13616690863
FSP106370:0:Tyes---0---5
FSP1855:0:Tyes-4152-6---0
FSUC59374:0:Tyes8111623-811-1543-0
FTUL351581:0:Tno1202---010701653657
FTUL393011:0:Tno1097---09871482615
FTUL393115:0:Tyes528-1073-13356600853
FTUL401614:0:Tyes1102-1227-0686791009
FTUL418136:0:Tno75-0-11892861133582
FTUL458234:0:Tno1144---010221546653
GBET391165:0:Tyes1984-1597198453553419030
GFOR411154:0:Tyes-2635----4560
GKAU235909:1:Tyes93492310
GMET269799:1:Tyes1819013277327832762611
GOXY290633:5:Tyes611-853-1092109101754
GSUL243231:0:Tyes3228232273228120989
GTHE420246:1:Tyes93492310
GURA351605:0:Tyes13490016246251862729
GVIO251221:0:Tyes35662178-3566222818270-
HACI382638:1:Tyes----0---
HARS204773:0:Tyes81-1481013087671
HAUR316274:2:Tyes02562---2562-2556
HBUT415426:0:Tyes--0-----
HCHE349521:0:Tyes5865105865215733955
HDUC233412:0:Tyes1138-11971138110212260100
HHAL349124:0:Tyes01279127801280127912251256
HHEP235279:0:Tyes796---0---
HINF281310:0:Tyes225-2502252522510620
HINF374930:0:Tyes0-15840158615852221237
HINF71421:0:Tno224-2802242782790608
HMOD498761:0:Tyes114-113420
HNEP81032:0:Tyes28091-28090113612707
HPY:0:Tno----0---
HPYL357544:1:Tyes----0---
HPYL85963:0:Tno----0---
HSOM205914:1:Tyes137-0137211090103
HSOM228400:0:Tno34-19475641949194810680
ILOI283942:0:Tyes2361102361212498223
JSP290400:1:Tyes326-3618-03570444
JSP375286:0:Tyes9511595013516700
KPNE272620:2:Tyes7116227101542314
KRAD266940:2:Fyes-----6-0
LACI272621:0:Tyes-357---3573580
LBRE387344:2:Tyes-540-567
LCAS321967:1:Tyes0540--67
LCHO395495:0:Tyes357813684-0131972322
LDEL321956:0:Tyes-0---01-
LDEL390333:0:Tyes-0---01-
LGAS324831:0:Tyes-12--10490
LHEL405566:0:Tyes-308---3083090
LINN272626:1:Tno0540-567
LINT363253:3:Tyes----10--
LJOH257314:0:Tyes-589588--5895900
LLAC272622:5:Tyes400-40--5-
LLAC272623:0:Tyes310-31--4-
LMES203120:1:Tyes286291290286--2920
LMON169963:0:Tno0540-567
LMON265669:0:Tyes0540-567
LPLA220668:0:Tyes-237-210
LPNE272624:0:Tno019261925-1927192621941821
LPNE297245:1:Fno018111810-1812181120771702
LPNE297246:1:Fyes019211920-1922192122021825
LPNE400673:0:Tno203912-0125521413
LREU557436:0:Tyes-540--67
LSAK314315:0:Tyes7237-210
LSPH444177:1:Tyes8238-20-
LWEL386043:0:Tyes0540-567
LXYL281090:0:Tyes-------0
MABS561007:1:Tyes5500-----562
MAER449447:0:Tyes4762-382047620-3875-
MAQU351348:2:Tyes3437103437217713484
MAVI243243:0:Tyes0------13
MBOV233413:0:Tno17------0
MBOV410289:0:Tno17------0
MCAP243233:0:Tyes0251252025025112193
MEXT419610:0:Tyes445-0-110611054713389
MFLA265072:0:Tyes2282202282322480130
MGIL350054:3:Tyes0------10
MKAN190192:0:Tyes--0-----
MLAB410358:0:Tyes-0---0--
MLEP272631:0:Tyes6------0
MLOT266835:2:Tyes1245-7371245132213217150
MMAG342108:0:Tyes123295012329695410655
MMAR394221:0:Tyes247142470247104--
MPEN272633:0:Tyes-0------
MPET420662:1:Tyes3326151139264715015102431
MSME246196:0:Tyes30290-----3017
MSP164756:1:Tno13------0
MSP164757:0:Tno13------0
MSP189918:2:Tyes13------0
MSP266779:3:Tyes0-3433039439332264073
MSP400668:0:Tyes1034-01034214160601
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