CANDIDATE ID: 256

CANDIDATE ID: 256

NUMBER OF GENES: 7
AVERAGE SCORE:    9.9910819e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7711 (gspL) (b3333)
   Products of gene:
     - G7711-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)

- G7710 (gspK) (b3332)
   Products of gene:
     - G7710-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)

- G7709 (gspJ) (b3331)
   Products of gene:
     - G7709-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)

- G7708 (gspI) (b3330)
   Products of gene:
     - G7708-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)

- G7706 (gspG) (b3328)
   Products of gene:
     - G7706-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)

- G7705 (gspF) (b3327)
   Products of gene:
     - G7705-MONOMER (putative protein secretion protein for export)
     - CPLX0-3382 (GspC-O secreton  complex)

- G7535 (yghD) (b2968)
   Products of gene:
     - G7535-MONOMER (predicted secretion pathway protein, M-type protein, membrane anchored)



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ORGANISMS CONTAINING AT LEAST 6 GENES FROM THE GROUP:

Total number of orgs: 45
Effective number of orgs (counting one per cluster within 468 clusters): 27

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
VVUL216895 ncbi Vibrio vulnificus CMCP67
VVUL196600 ncbi Vibrio vulnificus YJ0167
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1147
VCHO345073 ncbi Vibrio cholerae O3957
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169617
SSP94122 ncbi Shewanella sp. ANA-37
SSED425104 ncbi Shewanella sediminis HAW-EB37
SPEA398579 ncbi Shewanella pealeana ATCC 7003457
SONE211586 ncbi Shewanella oneidensis MR-17
SLOI323850 ncbi Shewanella loihica PV-47
SHAL458817 ncbi Shewanella halifaxensis HAW-EB47
SDEN318161 ncbi Shewanella denitrificans OS2176
SBAL402882 ncbi Shewanella baltica OS1857
SBAL399599 ncbi Shewanella baltica OS1957
PPRO298386 ncbi Photobacterium profundum SS97
PMEN399739 ncbi Pseudomonas mendocina ymp6
PING357804 ncbi Psychromonas ingrahamii 377
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1257
PATL342610 ncbi Pseudoalteromonas atlantica T6c7
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785787
ILOI283942 ncbi Idiomarina loihiensis L2TR6
HHAL349124 ncbi Halorhodospira halophila SL16
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S887
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)7
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6067
ECOL405955 ncbi Escherichia coli APEC O17
ECOL364106 ncbi Escherichia coli UTI897
ECOL362663 ncbi Escherichia coli 5367
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31107
ECOL199310 ncbi Escherichia coli CFT0737
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
CPSY167879 ncbi Colwellia psychrerythraea 34H6
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4497
AHYD196024 Aeromonas hydrophila dhakensis7


Names of the homologs of the genes in the group in each of these orgs
  G7711   G7710   G7709   G7708   G7706   G7705   G7535   
YENT393305 YE3343YE3571YE3570AYE3345YE3568YE3567
VVUL216895 VV1_0869VV1_0870VV1_0871VV1_0872VV1_0874VV1_0875VV1_0868
VVUL196600 VV0222VV0221VV0220VV0219VV0217VV0216VV0223
VPAR223926 VP0141VP0140VP0139VP0136VP0135VP0142
VFIS312309 VF2466VF2467VF2468VF2469VF2471VF2472VF2465
VCHO345073 VC0395_A2298VC0395_A2299VC0395_A2300VC0395_A2301VC0395_A2303VC0395_A2304VC0395_A2297
VCHO VC2725VC2726VC2727VC2728VC2730VC2731VC2724
SSP94122 SHEWANA3_0159SHEWANA3_0158SHEWANA3_0157SHEWANA3_0156SHEWANA3_0154SHEWANA3_0153SHEWANA3_0160
SSED425104 SSED_4350SSED_4351SSED_4352SSED_4353SSED_4355SSED_4356SSED_4349
SPEA398579 SPEA_0152SPEA_0151SPEA_0150SPEA_0149SPEA_0147SPEA_0146SPEA_0153
SONE211586 SO_0174SO_0173SO_0172SO_0171SO_0169SO_0168SO_0175
SLOI323850 SHEW_3611SHEW_3612SHEW_3613SHEW_3614SHEW_3616SHEW_3617SHEW_3610
SHAL458817 SHAL_4166SHAL_4167SHAL_4168SHAL_4169SHAL_4171SHAL_4172SHAL_4165
SDEN318161 SDEN_0129SDEN_0128SDEN_0126SDEN_0124SDEN_0123SDEN_0130
SBAL402882 SHEW185_0157SHEW185_0156SHEW185_0155SHEW185_0154SHEW185_0152SHEW185_0151SHEW185_0158
SBAL399599 SBAL195_0161SBAL195_0160SBAL195_0159SBAL195_0158SBAL195_0156SBAL195_0155SBAL195_0162
PPRO298386 PBPRA3473PBPRA3474PBPRA3475PBPRA3476PBPRA3478PBPRA3479PBPRA3472
PMEN399739 PMEN_2919PMEN_2920PMEN_2921PMEN_2923PMEN_2924PMEN_2917
PING357804 PING_0105PING_0104PING_0103PING_0102PING_0100PING_0099PING_0106
PHAL326442 PSHAA0240PSHAA0239PSHAA0238PSHAA0237PSHAA0235PSHAA0234PSHAA0241
PATL342610 PATL_0239PATL_0238PATL_0237PATL_0236PATL_0234PATL_0233PATL_0240
PAER208964 PA3097PA3098PA3099PA3101PA3102PA3095
PAER208963 PA14_24070PA14_24060PA14_24050PA14_24020PA14_24010PA14_24100
KPNE272620 GKPORF_B4437GKPORF_B4438GKPORF_B4439GKPORF_B4440GKPORF_B4442GKPORF_B4443GKPORF_B4436
ILOI283942 IL2019IL2020IL2021IL2023IL2024IL2017
HHAL349124 HHAL_2389HHAL_2375HHAL_2374HHAL_2372HHAL_2371HHAL_2387
ECOL585397 ECED1_3605ECED1_3996ECED1_3995ECED1_3993ECED1_3992ECED1_3603
ECOL585057 ECIAI39_3449ECIAI39_3450ECIAI39_3451ECIAI39_3453ECIAI39_3454ECIAI39_3447
ECOL585055 EC55989_3371EC55989_3372EC55989_3373EC55989_3375EC55989_3376EC55989_3369
ECOL585035 ECS88_3721ECS88_3720ECS88_3719ECS88_3718ECS88_3716ECS88_3715ECS88_3335
ECOL585034 ECIAI1_3103ECIAI1_3104ECIAI1_3105ECIAI1_3107ECIAI1_3108ECIAI1_3101
ECOL481805 ECOLC_0380ECOLC_0381ECOLC_0382ECOLC_0383ECOLC_0385ECOLC_0386
ECOL469008 ECBD_0418ECBD_0419ECBD_0420ECBD_0421ECBD_0423ECBD_0424ECBD_0770
ECOL439855 ECSMS35_3240ECSMS35_3241ECSMS35_3242ECSMS35_3244ECSMS35_3245ECSMS35_3238
ECOL413997 ECB_03184ECB_03183ECB_03182ECB_03181ECB_03179ECB_03178ECB_02829
ECOL405955 APECO1_3119APECO1_3120APECO1_3121APECO1_3122APECO1_3124APECO1_3125APECO1_3467
ECOL364106 UTI89_C3788UTI89_C3787UTI89_C3786UTI89_C3785UTI89_C3783UTI89_C3782UTI89_C3376
ECOL362663 ECP_3421ECP_3420ECP_3419ECP_3418ECP_3416ECP_3415ECP_3037
ECOL331111 ECE24377A_3420ECE24377A_3421ECE24377A_3422ECE24377A_3424ECE24377A_3425ECE24377A_3418
ECOL316407 ECK3320:JW5705:B3333ECK3319:JW3294:B3332ECK3318:JW3293:B3331ECK3317:JW5706:B3330ECK3315:JW3290:B3328ECK3314:JW3289:B3327ECK2963:JW2935:B2968
ECOL199310 C4104C4103C4102C4101C4099C4098C3699
ECAR218491 ECA3102ECA3103ECA3104ECA3106ECA3107ECA3100
CPSY167879 CPS_4584CPS_4585CPS_4586CPS_4588CPS_4589CPS_4582
ASAL382245 ASA_3783ASA_3782ASA_3781ASA_3780ASA_3778ASA_3777ASA_3784
AHYD196024 AHA_0577AHA_0576AHA_0575AHA_0574AHA_0572AHA_0571AHA_0578


Organism features enriched in list (features available for 44 out of the 45 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Cholera 0.005576122
Disease:Gastroenteritis 0.0000101713
Disease:opportunistic_infections 0.003480735
Disease:primary_septicemia 0.005576122
Disease:wound_infections 0.005576122
GC_Content_Range4:0-40 3.005e-72213
GC_Content_Range4:40-60 1.143e-1138224
GC_Content_Range4:60-100 0.00451654145
GC_Content_Range7:30-40 0.00003672166
GC_Content_Range7:40-50 0.000170519117
GC_Content_Range7:50-60 0.000046219107
GC_Content_Range7:60-70 0.00927464134
Genome_Size_Range5:2-4 0.00001343197
Genome_Size_Range5:4-6 5.619e-1538184
Genome_Size_Range9:2-3 0.00193032120
Genome_Size_Range9:5-6 1.581e-112588
Gram_Stain:Gram_Neg 5.367e-1244333
Habitat:Host-associated 0.00199827206
Motility:No 0.00001751151
Motility:Yes 2.764e-1342267
Optimal_temp.:10 0.005576122
Optimal_temp.:20-30 0.000804247
Oxygen_Req:Aerobic 0.00283706185
Oxygen_Req:Anaerobic 0.00150431102
Oxygen_Req:Facultative 2.357e-1136201
Pathogenic_in:No 0.00394529226
Shape:Rod 1.756e-640347
Temp._range:Psychrophilic 9.091e-669



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 420
Effective number of orgs (counting one per cluster within 468 clusters): 326

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TSP28240 Thermotoga sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT20
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93111
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSP321327 ncbi Synechococcus sp. JA-3-3Ab1
SSP292414 ncbi Ruegeria sp. TM10400
SSP1148 ncbi Synechocystis sp. PCC 68031
SSP1131 Synechococcus sp. CC96050
SSON300269 ncbi Shigella sonnei Ss0461
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae1
SMUT210007 ncbi Streptococcus mutans UA1591
SMEL266834 ncbi Sinorhizobium meliloti 10210
SMED366394 ncbi Sinorhizobium medicae WSM4190
SMAR399550 ncbi Staphylothermus marinus F10
SLAC55218 Ruegeria lacuscaerulensis0
SHIGELLA ncbi Shigella flexneri 2a str. 2457T1
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SGLO343509 ncbi Sodalis glossinidius morsitans0
SFLE373384 ncbi Shigella flexneri 5 str. 84011
SFLE198214 ncbi Shigella flexneri 2a str. 3011
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4760
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B670
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91500
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT180
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty20
SCO ncbi Streptomyces coelicolor A3(2)0
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2050
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170250
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170290
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.10
RSP357808 ncbi Roseiflexus sp. RS-10
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111700
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38410
RFEL315456 ncbi Rickettsia felis URRWXCal20
RETL347834 ncbi Rhizobium etli CFN 420
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI1
PSP56811 Psychrobacter sp.1
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO11
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCAR338963 ncbi Pelobacter carbinolicus DSM 23801
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-41
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8311
OCAR504832 ncbi Oligotropha carboxidovorans OM50
OANT439375 ncbi Ochrobactrum anthropi ATCC 491880
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NMEN122586 ncbi Neisseria meningitidis MC581
NFAR247156 ncbi Nocardia farcinica IFM 101520
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.1
MSP400668 ncbi Marinomonas sp. MWYL10
MSP266779 ncbi Chelativorans sp. BNC10
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MEXT419610 ncbi Methylobacterium extorquens PA10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-411
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM1
JSP375286 ncbi Janthinobacterium sp. Marseille1
JSP290400 ncbi Jannaschia sp. CCS10
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237790
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-21
GOXY290633 ncbi Gluconobacter oxydans 621H1
GKAU235909 ncbi Geobacillus kaustophilus HTA4261
GFOR411154 ncbi Gramella forsetii KT08030
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI30
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250171
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
FMAG334413 ncbi Finegoldia magna ATCC 293281
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a0
ESP42895 Enterobacter sp.1
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5831
ECOO157 ncbi Escherichia coli O157:H7 EDL9331
ECOL83334 Escherichia coli O157:H71
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough1
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DRAD243230 ncbi Deinococcus radiodurans R11
DPSY177439 ncbi Desulfotalea psychrophila LSv541
DNOD246195 ncbi Dichelobacter nodosus VCS1703A1
DHAF138119 ncbi Desulfitobacterium hafniense Y511
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP501479 Citreicella sp. SE450
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1011
CPER195102 ncbi Clostridium perfringens 131
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10621
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3811
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CFET360106 ncbi Campylobacter fetus fetus 82-401
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138261
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6571
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B1
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBOT441771 ncbi Clostridium botulinum A str. Hall1
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193971
CBOT36826 Clostridium botulinum A1
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
BWEI315730 ncbi Bacillus weihenstephanensis KBAB40
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHU412694 ncbi Bacillus thuringiensis Al Hakam1
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-271
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSUB ncbi Bacillus subtilis subtilis 1680
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145800
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1101
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BHAL272558 ncbi Bacillus halodurans C-1251
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1021
BCER405917 Bacillus cereus W0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-981
BCER288681 ncbi Bacillus cereus E33L0
BCER226900 ncbi Bacillus cereus ATCC 145790
BCAN483179 ncbi Brucella canis ATCC 233650
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02480
BANT568206 ncbi Bacillus anthracis CDC 6840
BANT261594 ncbi Bacillus anthracis Ames Ancestor0
BANT260799 ncbi Bacillus anthracis Sterne0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.0
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs1
ANAE240017 Actinomyces oris MG10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232701
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40180
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  G7711   G7710   G7709   G7708   G7706   G7705   G7535   
ZMOB264203
WSUC273121
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA0794
TSP28240
TROS309801
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591 TLET_0504
TKOD69014
TFUS269800
TERY203124
TELO197221 TLL1011
TDEN326298
TDEN243275
TACI273075
SWOL335541 SWOL_0533
STYP99287
STRO369723
STOK273063
STHE322159
STHE299768
STHE292459
STHE264199
SSUI391296
SSUI391295
SSP84588
SSP64471 GSYN0691
SSP644076
SSP387093 SUN_0024
SSP321327 CYA_1967
SSP292414
SSP1148 SLL1694
SSP1131
SSON300269 SSO_0116
SSOL273057
SSAP342451
SRUB309807
SPYO370554 MGAS10750_SPY0095
SPYO370553 MGAS2096_SPY0091
SPYO370552 MGAS10270_SPY0090
SPYO370551 MGAS9429_SPY0089
SPYO319701 M28_SPY0086
SPYO293653 M5005_SPY0088
SPYO286636 M6_SPY0136
SPYO198466 SPYM3_0080
SPYO193567
SPYO186103 SPYM18_0105
SPYO160490 SPY0103
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313 SPJ_2057
SMUT210007 SMU_1984
SMEL266834
SMED366394
SMAR399550
SLAC55218
SHIGELLA PPDD
SHAE279808
SGOR29390
SGLO343509
SFLE373384 SFV_0099
SFLE198214 AAN41769.1
SERY405948
SEPI176280
SEPI176279
SENT454169
SENT321314
SENT295319
SENT220341
SENT209261
SCO
SAVE227882
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037
SAGA211110
SAGA208435
SAGA205921
SACI330779
RTYP257363
RSPH349102
RSPH349101
RSPH272943
RSP357808
RSP101510
RSAL288705
RRUB269796
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057
RPAL316055 RPE_2661
RPAL258594
RMAS416276
RLEG216596
RFEL315456
RETL347834
RDEN375451
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RALB246199 GRAORF_3445
RAKA293614
PTOR263820
PTHE370438 PTH_1147
PSP56811 PSYCPRWF_0150
PSP312153
PRUM264731
PPEN278197
PMUL272843
PMOB403833
PMAR93060
PMAR74547 PMT0262
PMAR74546 PMT9312_1187
PMAR59920
PMAR167555
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PLUM243265 PLU3638
PISL384616
PINT246198
PHOR70601
PGIN242619
PFUR186497
PDIS435591
PCAR338963 PCAR_2147
PAST100379
PARS340102
PARC259536 PSYC_0063
PAER178306
PACN267747
PABY272844
OTSU357244
OIHE221109 OB1910
OCAR504832
OANT439375
NWIN323098
NSP387092
NSEN222891
NPHA348780
NMEN122586 NMB_0333
NFAR247156
MVAN350058
MTUB419947
MTUB336982
MTHE349307
MTHE187420
MTBRV
MTBCDC
MSYN262723
MSUC221988
MSTA339860
MSP409 M446_2021
MSP400668
MSP266779
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MMAG342108
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MEXT419610
MCAP340047
MBUR259564
MBOV410289
MBOV233413
MBAR269797
MAVI243243
MART243272
MAEO419665
MACE188937
MABS561007
LXYL281090
LWEL386043
LSPH444177 BSPH_3614
LSAK314315
LREU557436
LPLA220668 LP_2247
LMON265669
LMON169963
LMES203120
LLAC272623
LLAC272622 LACR_2425
LJOH257314
LINT363253
LINN272626
LHEL405566 LHV_0780
LGAS324831
LDEL390333 LDB0681
LDEL321956 LBUL_0612
LCAS321967
LBRE387344
LACI272621 LBA0737
JSP375286 MMA_2997
JSP290400
IHOS453591
HWAL362976
HSP64091
HSOM228400
HSOM205914
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HINF71421
HINF374930
HINF281310
HHEP235279
HDUC233412
HBUT415426
HAUR316274
HACI382638
GTHE420246 GTNG_2557
GOXY290633 GOX0992
GKAU235909 GK2627
GFOR411154
FSP1855 FRANEAN1_2610
FSP106370
FPHI484022 FPHI_0118
FNUC190304
FNOD381764 FNOD_1271
FMAG334413 FMG_0555
FJOH376686
FALN326424
ESP42895 ENT638_0650
ERUM302409
ERUM254945
ELIT314225
EFAE226185 EF_2044
ECOO157 PPDD
ECOL83334 ECS0112
ECHA205920
ECAN269484
DVUL882 DVU_1271
DSP255470 CBDBA1303
DSP216389 DEHABAV1_1164
DSHI398580
DRAD243230 DR_1863
DPSY177439 DP2782
DNOD246195 DNO_1125
DHAF138119 DSY2383
DDES207559
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439
CSUL444179
CSP501479
CRUT413404
CPRO264201 PC1896
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPER289380 CPR_2271
CPER195102 CPE2285
CPEL335992 SAR11_0058
CNOV386415 NT01CX_1595
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943
CJEJ407148 C8J_1259
CJEJ360109 JJD26997_0367
CJEJ354242 CJJ81176_1342
CJEJ195099 CJE_1532
CJEJ192222 CJ1343C
CJEI306537
CHUT269798
CHOM360107 CHAB381_1565
CGLU196627
CFET360106 CFF8240_0865
CFEL264202
CEFF196164
CDIP257309
CCUR360105 CCV52592_1963
CCON360104 CCC13826_1109
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT536232 CLM_2124
CBOT515621 CLJ_B2094
CBOT508765 CLL_A3301
CBOT498213 CLD_2730
CBOT441772 CLI_1971
CBOT441771 CLC_1851
CBOT441770 CLB_1844
CBOT36826 CBO1907
CBLO291272
CBLO203907
CBEI290402 CBEI_4217
CACE272562 CAC0989
CABO218497 CAB914
BXEN266265
BWEI315730
BTUR314724
BTRI382640
BTHU412694 BALH_3838
BTHU281309 BT9727_3983
BTHE226186
BSUI470137
BSUI204722
BSUB
BSP107806
BQUI283165
BPUM315750
BPER257313
BPAR257311
BOVI236
BMEL359391
BMEL224914
BLON206672
BLIC279010
BJAP224911 BLL6019
BHER314723
BHEN283166
BHAL272558 BH2827
BGAR290434
BFRA295405
BFRA272559
BCLA66692
BCIC186490
BCER572264 BCA_4351
BCER405917
BCER315749 BCER98_2926
BCER288681
BCER226900
BCAN483179
BBUR224326
BBRO257310
BBAC360095
BAPH372461
BAPH198804
BANT592021
BANT568206
BANT261594
BANT260799
BAMY326423
BAFZ390236
BABO262698
AYEL322098
AURANTIMONAS
ASP1667
APLE434271
APLE416269
APHA212042
APER272557
AORE350688 CLOS_1636
ANAE240017
AMAR234826
ALAI441768
AFUL224325
AFER243159 AFE_2075
ACEL351607 ACEL_1320
ACAU438753
ABUT367737
AAUR290340


Organism features enriched in list (features available for 392 out of the 420 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.268e-78292
Arrangment:Clusters 0.00902071617
Disease:Gastroenteritis 0.0011066313
Endospores:No 1.238e-6167211
Endospores:Yes 0.00146804553
GC_Content_Range4:0-40 2.505e-20191213
GC_Content_Range4:40-60 7.327e-7124224
GC_Content_Range4:60-100 0.000017077145
GC_Content_Range7:0-30 9.813e-74547
GC_Content_Range7:30-40 9.902e-13146166
GC_Content_Range7:50-60 6.209e-750107
GC_Content_Range7:60-70 6.694e-669134
Genome_Size_Range5:0-2 5.136e-20146155
Genome_Size_Range5:4-6 1.164e-1286184
Genome_Size_Range5:6-10 0.00005361947
Genome_Size_Range9:0-1 0.00001632727
Genome_Size_Range9:1-2 1.465e-14119128
Genome_Size_Range9:2-3 0.000110897120
Genome_Size_Range9:4-5 0.00005744896
Genome_Size_Range9:5-6 2.645e-73888
Genome_Size_Range9:6-8 0.00001291338
Gram_Stain:Gram_Neg 1.751e-19175333
Gram_Stain:Gram_Pos 5.464e-17139150
Habitat:Aquatic 0.00485165191
Habitat:Host-associated 1.918e-6163206
Habitat:Multiple 0.0001433101178
Motility:No 1.660e-8128151
Motility:Yes 1.626e-11142267
Optimal_temp.:- 0.0000404151257
Optimal_temp.:25-35 0.00357251414
Optimal_temp.:30-37 0.00069211818
Optimal_temp.:37 4.159e-690106
Oxygen_Req:Aerobic 0.0000113102185
Oxygen_Req:Anaerobic 0.000037985102
Pathogenic_in:Human 0.0029473157213
Pathogenic_in:Plant 0.0011466415
Shape:Coccus 0.00004287082
Shape:Irregular_coccus 0.00902071617
Shape:Rod 4.408e-8204347
Temp._range:Psychrophilic 0.006260829



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:

Total number of orgs: 6
Effective number of orgs (counting one per cluster within 468 clusters): 2

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT18 0.009198034750
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B67 0.008884334800
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT2 0.005607835440
ECOO157 ncbi Escherichia coli O157:H7 EDL933 0.004661139701
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL476 0.004470935740
ECOL83334 Escherichia coli O157:H7 0.004104139811


Organism features enriched in list (features available for 5 out of the 6 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.00530254112
Disease:Gastroenteritis_and_food_poisoning 0.008576311
Disease:Hemorrhagic_colitis 0.008576311
Disease:Salmonellosis_and_swine_paratyphoid 0.008576311
GC_Content_Range4:40-60 0.00814425224
GC_Content_Range7:50-60 0.00019275107
Genome_Size_Range5:4-6 0.00301595184
Oxygen_Req:Facultative 0.00471345201
Pathogenic_in:Human 0.00631675213



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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
AST-PWY (arginine degradation II (AST pathway))120420.5241
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50220.4197



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7710   G7709   G7708   G7706   G7705   G7535   
G77110.9989470.9987330.9986940.99860.9985350.998883
G77100.9993920.9992180.9993820.9993360.999182
G77090.9992620.9993110.9992640.99901
G77080.999290.9992170.998897
G77060.9998220.999172
G77050.999125
G7535



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PAIRWISE BLAST SCORES:

  G7711   G7710   G7709   G7708   G7706   G7705   G7535   
G77110.0f0------
G7710-0.0f0-----
G7709--0.0f0----
G7708---0.0f0---
G7706----0.0f0--
G7705-----0.0f0-
G7535------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-3382 (GspC-O secreton  complex) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.857, average score: 0.987)
  Genes in pathway or complex:
             0.9875 0.9708 EG11359 (gspO) EG11359-MONOMER (leader peptidase, integral membrane protein)
             0.9879 0.9817 EG12173 (gspM) EG12173-MONOMER (putative protein secretion protein)
   *in cand* 0.9989 0.9985 G7711 (gspL) G7711-MONOMER (putative protein secretion protein for export)
   *in cand* 0.9994 0.9989 G7710 (gspK) G7710-MONOMER (putative protein secretion protein for export)
   *in cand* 0.9993 0.9987 G7709 (gspJ) G7709-MONOMER (putative protein secretion protein for export)
   *in cand* 0.9992 0.9987 G7708 (gspI) G7708-MONOMER (putative protein secretion protein for export)
             0.9292 0.7683 G7707 (gspH) G7707-MONOMER (putative protein secretion protein for export)
   *in cand* 0.9994 0.9986 G7706 (gspG) G7706-MONOMER (putative protein secretion protein for export)
   *in cand* 0.9993 0.9985 G7705 (gspF) G7705-MONOMER (putative protein secretion protein for export)
             0.9993 0.9985 G7704 (gspE) G7704-MONOMER (putative protein secretion protein for export)
             0.9992 0.9984 G7703 (gspD) G7703-MONOMER (putative protein secretion protein for export)
             0.9972 0.9962 G7702 (gspC) G7702-MONOMER (putative protein secretion protein for export)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9992 0.9989 G7535 (yghD) G7535-MONOMER (predicted secretion pathway protein, M-type protein, membrane anchored)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G7705 G7706 G7708 G7709 G7710 G7711 (centered at G7709)
G7535 (centered at G7535)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7711   G7710   G7709   G7708   G7706   G7705   G7535   
41/62376/62362/62359/623265/623237/62371/623
AAEO224324:0:Tyes----0223-
AAVE397945:0:Tyes----02994-
ABAC204669:0:Tyes----0213-
ABAU360910:0:Tyes----100-
ABOR393595:0:Tyes----10-
ACEL351607:0:Tyes-----0-
ACRY349163:8:Tyes----09-
ADEH290397:0:Tyes----01-
AEHR187272:0:Tyes--45780
AFER243159:0:Tyes-----0-
AHYD196024:0:Tyes6543107
AMAR329726:9:Tyes----9220-
AMET293826:0:Tyes----01-
AORE350688:0:Tyes-----0-
ASAL382245:5:Tyes6543107
ASP232721:2:Tyes----120-
ASP62928:0:Tyes----01150-
ASP62977:0:Tyes-1820--10-
ASP76114:2:Tyes--0-34-
AVAR240292:3:Tyes----029-
BAMB339670:3:Tno----680
BAMB398577:3:Tno----680
BBAC264462:0:Tyes----04-
BCEN331271:2:Tno----208
BCEN331272:3:Tyes----680
BCER315749:1:Tyes----0--
BCER572264:1:Tno----0--
BHAL272558:0:Tyes----0--
BJAP224911:0:Fyes----0--
BMAL243160:1:Tno----680
BMAL320388:1:Tno----680
BMAL320389:1:Tyes----208
BPET94624:0:Tyes----010-
BPSE272560:1:Tyes----208
BPSE320372:1:Tno----208
BPSE320373:1:Tno----307
BSP36773:1:Tyes-----0-
BSP36773:2:Tyes----6-0
BSP376:0:Tyes----04808-
BTHA271848:1:Tno----208
BTHU281309:1:Tno----0--
BTHU412694:1:Tno----0--
BVIE269482:7:Tyes----680
CABO218497:0:Tyes----0--
CACE272562:1:Tyes----0--
CAULO:0:Tyes-54310-
CBEI290402:0:Tyes-----0-
CBOT36826:1:Tno----0--
CBOT441770:0:Tyes----0--
CBOT441771:0:Tno----0--
CBOT441772:1:Tno----0--
CBOT498213:1:Tno----0--
CBOT508765:1:Tyes-----0-
CBOT515621:2:Tyes----0--
CBOT536232:0:Tno----0--
CCON360104:2:Tyes----0--
CCUR360105:0:Tyes-----0-
CDES477974:0:Tyes----012-
CDIF272563:1:Tyes----01215-
CFET360106:0:Tyes----0--
CHOM360107:1:Tyes----0--
CHYD246194:0:Tyes----10-
CJAP155077:0:Tyes-01-45-
CJEJ192222:0:Tyes----0--
CJEJ195099:0:Tno----0--
CJEJ354242:2:Tyes----0--
CJEJ360109:0:Tyes----0--
CJEJ407148:0:Tno----0--
CNOV386415:0:Tyes-----0-
CPEL335992:0:Tyes-----0-
CPER195102:1:Tyes-----0-
CPER195103:0:Tno----03-
CPER289380:3:Tyes-----0-
CPRO264201:0:Fyes-----0-
CPSY167879:0:Tyes-234670
CSAL290398:0:Tyes----02-
CSP78:2:Tyes----10-
CVIO243365:0:Tyes---023-
DARO159087:0:Tyes----23510-
DETH243164:0:Tyes----80-
DGEO319795:1:Tyes----12730-
DHAF138119:0:Tyes----0--
DNOD246195:0:Tyes-----0-
DOLE96561:0:Tyes----013-
DPSY177439:2:Tyes-----0-
DRAD243230:3:Tyes-----0-
DRED349161:0:Tyes----012-
DSP216389:0:Tyes-----0-
DSP255470:0:Tno-----0-
DVUL882:1:Tyes-----0-
ECAR218491:0:Tyes-234670
ECOL199310:0:Tno3943933923913893880
ECOL316407:0:Tno9719729739749769770
ECOL331111:6:Tno-234670
ECOL362663:0:Tno3863853843833813800
ECOL364106:1:Tno4084074064054034020
ECOL405955:2:Tyes3563553533523503490
ECOL409438:6:Tyes-2-4670
ECOL413997:0:Tno3633623613603583570
ECOL439855:4:Tno-234670
ECOL469008:0:Tno012356360
ECOL481805:0:Tno012356-
ECOL585034:0:Tno-234670
ECOL585035:0:Tno3833823813803783770
ECOL585055:0:Tno-234670
ECOL585056:2:Tno-23-670
ECOL585057:0:Tno-234670
ECOL585397:0:Tno-23883873853840
ECOL83334:0:Tno----0--
ECOLI:0:Tno3643633623613593580
ECOO157:0:Tno----0--
EFAE226185:3:Tyes----0--
EFER585054:1:Tyes-54-107
ESP42895:1:Tyes-----0-
FMAG334413:1:Tyes----0--
FNOD381764:0:Tyes-----0-
FPHI484022:1:Tyes-----0-
FRANT:0:Tno----0843-
FSP1855:0:Tyes----0--
FSUC59374:0:Tyes----01305-
FTUL351581:0:Tno----0570-
FTUL393011:0:Tno----0540-
FTUL393115:0:Tyes----0834-
FTUL401614:0:Tyes----01037-
FTUL418136:0:Tno----5520-
FTUL458234:0:Tno----0570-
GBET391165:0:Tyes----100-
GKAU235909:1:Tyes-----0-
GMET269799:1:Tyes-5-310-
GOXY290633:5:Tyes----0--
GSUL243231:0:Tyes----01-
GTHE420246:1:Tyes-----0-
GURA351605:0:Tyes----01-
GVIO251221:0:Tyes----7720-
HARS204773:0:Tyes----11060-
HCHE349521:0:Tyes-23-670
HHAL349124:0:Tyes-18431016
HMOD498761:0:Tyes----01-
HNEP81032:0:Tyes-5--10-
ILOI283942:0:Tyes-234670
JSP375286:0:Tyes-----0-
KPNE272620:2:Tyes1234670
KRAD266940:2:Fyes----10-
LACI272621:0:Tyes----0--
LBIF355278:2:Tyes----10-
LBIF456481:2:Tno----10-
LBOR355276:1:Tyes----01-
LBOR355277:1:Tno----01-
LCHO395495:0:Tyes----010-
LDEL321956:0:Tyes----0--
LDEL390333:0:Tyes----0--
LHEL405566:0:Tyes----0--
LINT189518:1:Tyes----01-
LINT267671:1:Tno----10-
LLAC272622:5:Tyes----0--
LPLA220668:0:Tyes----0--
LPNE272624:0:Tno---023514
LPNE297245:1:Fno---023523
LPNE297246:1:Fyes---023529
LPNE400673:0:Tno---023533
LSPH444177:1:Tyes----0--
MAER449447:0:Tyes----42740-
MAQU351348:2:Tyes-54310-
MCAP243233:0:Tyes----10-
MFLA265072:0:Tyes----2770-
MLOT266835:2:Tyes----40-
MMAR394221:0:Tyes-5--10-
MPET420662:1:Tyes----010-
MSP409:2:Tyes----0--
MTHE264732:0:Tyes----01-
MXAN246197:0:Tyes----12610-
NARO279238:0:Tyes-0--12891290-
NEUR228410:0:Tyes----10260-
NEUT335283:2:Tyes----0525-
NGON242231:0:Tyes----01099-
NHAM323097:2:Tyes----01-
NMEN122586:0:Tno-----0-
NMEN122587:0:Tyes----0998-
NMEN272831:0:Tno----01428-
NMEN374833:0:Tno----0946-
NMUL323848:3:Tyes-0-2410-
NOCE323261:1:Tyes----01-
NSP103690:6:Tyes----01895-
NSP35761:1:Tyes----06-
OIHE221109:0:Tyes----0--
PAER208963:0:Tyes-543107
PAER208964:0:Tno-234670
PARC259536:0:Tyes-----0-
PATL342610:0:Tyes6543107
PCAR338963:0:Tyes-----0-
PCRY335284:1:Tyes---126810-
PENT384676:0:Tyes-1918--18220-
PFLU205922:0:Tyes----60-
PFLU216595:1:Tyes----0781-
PFLU220664:0:Tyes--0-410-
PHAL326442:1:Tyes6543107
PING357804:0:Tyes6543107
PLUM243265:0:Fyes----0--
PMAR167546:0:Tyes----130-
PMAR74546:0:Tyes-----0-
PMAR74547:0:Tyes----0--
PMEN399739:0:Tyes-234670
PNAP365044:8:Tyes----100-
PPRO298386:2:Tyes1234670
PPUT160488:0:Tno-0--76-
PPUT351746:0:Tyes-0--76-
PPUT76869:0:Tno-0--76-
PSP117:0:Tyes----12190-
PSP296591:2:Tyes----010-
PSP56811:2:Tyes-----0-
PSTU379731:0:Tyes-54310-
PSYR205918:0:Tyes----01-
PSYR223283:2:Tyes----01-
PTHE370438:0:Tyes-----0-
RALB246199:0:Tyes-----0-
REUT264198:3:Tyes----010-
REUT381666:2:Tyes----0106
RFER338969:1:Tyes----010-
RMET266264:2:Tyes----0106
RPAL316055:0:Tyes----0--
RPAL316056:0:Tyes----01-
RSOL267608:1:Tyes----0106
RXYL266117:0:Tyes----06-
SACI56780:0:Tyes----10-
SALA317655:1:Tyes-5--10-
SBAL399599:3:Tyes6543107
SBAL402882:1:Tno6543107
SBOY300268:1:Tyes-5--107
SDEG203122:0:Tyes-0--45-
SDEN318161:0:Tyes65-3107
SDYS300267:1:Tyes-5--107
SELO269084:0:Tyes----0594-
SFLE198214:0:Tyes----0--
SFLE373384:0:Tno----0--
SFUM335543:0:Tyes----016-
SHAL458817:0:Tyes1234670
SHIGELLA:0:Tno----0--
SLOI323850:0:Tyes1234670
SMUT210007:0:Tyes----0--
SONE211586:1:Tyes6543107
SPEA398579:0:Tno6543107
SPNE1313:0:Tyes----0--
SPRO399741:1:Tyes-01245-
SPYO160490:0:Tno----0--
SPYO186103:0:Tno----0--
SPYO198466:0:Tno----0--
SPYO286636:0:Tno----0--
SPYO293653:0:Tno----0--
SPYO319701:0:Tyes----0--
SPYO370551:0:Tno----0--
SPYO370552:0:Tno----0--
SPYO370553:0:Tno----0--
SPYO370554:0:Tyes----0--
SSED425104:0:Tyes1234670
SSON300269:1:Tyes----0--
SSP1148:0:Tyes----0--
SSP321327:0:Tyes-----0-
SSP321332:0:Tyes----0843-
SSP387093:0:Tyes----0--
SSP64471:0:Tyes----0--
SSP94122:1:Tyes6543107
SWOL335541:0:Tyes-----0-
TCRU317025:0:Tyes-54-10-
TDEN292415:0:Tyes----5480-
TELO197221:0:Tyes----0--
TLET416591:0:Tyes-----0-
TPSE340099:0:Tyes----10-
TSP1755:0:Tyes----10-
TTEN273068:0:Tyes----10-
TTHE262724:1:Tyes----4190-
TTHE300852:2:Tyes-----0-
TTUR377629:0:Tyes-5--10-
VCHO:0:Tyes1234670
VCHO345073:1:Tno1234670
VEIS391735:1:Tyes----18830-
VFIS312309:2:Tyes1234670
VPAR223926:1:Tyes654-107
VVUL196600:2:Tyes6543107
VVUL216895:1:Tno1234670
XAUT78245:1:Tyes----10-
XAXO190486:0:Tyes-54-10-
XCAM190485:0:Tyes-01-45-
XCAM314565:0:Tno-54-10-
XCAM316273:0:Tno-01-45-
XCAM487884:0:Tno-54-10-
XFAS160492:2:Tno----01015-
XFAS183190:1:Tyes----01168-
XFAS405440:0:Tno----01142-
XORY291331:0:Tno----10-
XORY342109:0:Tyes----10-
XORY360094:0:Tno----02-
YENT393305:1:Tyes02232223219218-
YPES187410:5:Tno0---45-
YPES214092:3:Tno0---52510-
YPES349746:2:Tno0---45-
YPES360102:3:Tyes6---10-
YPES377628:2:Tno0---56-
YPES386656:2:Tno5---10-
YPSE273123:2:Tno0---56-
YPSE349747:2:Tno5---10-



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