CANDIDATE ID: 269

NUMBER OF GENES: 7
AVERAGE SCORE:    9.9960490e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    4.2857143e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages

GENE LIST:

- EG12412 (rfbB) (b2041)
   Products of gene:
     - DTDPGLUCDEHYDRAT-MONOMER (RmlB)
     - DTDPGLUCDEHYDRAT-CPLX (dTDP-glucose 4,6-dehydratase)
       Reactions:
        dTDP-D-glucose  =  dTDP-4-dehydro-6-deoxy-D-glucose + H2O
         In pathways
         OANTIGEN-PWY (O-antigen building blocks biosynthesis (E. coli))
         PWY-6404 (PWY-6404)
         PWY-3221 (PWY-3221)
         DTDPRHAMSYN-PWY (dTDP-L-rhamnose biosynthesis I)
         ECASYN-PWY (enterobacterial common antigen biosynthesis)

- EG12411 (rfbD) (b2040)
   Products of gene:
     - DTDPDEHYRHAMREDUCT-MONOMER (dTDP-4-dehydrorhamnose reductase)
       Reactions:
        NADP+ + dTDP-alpha-L-rhamnose  =  NADPH + dTDP-4-dehydro-6-deoxy-L-mannose + H+
         In pathways
         OANTIGEN-PWY (O-antigen building blocks biosynthesis (E. coli))
         PWY-6404 (PWY-6404)
         DTDPRHAMSYN-PWY (dTDP-L-rhamnose biosynthesis I)
     - DTDPRHAMSYNTHMULTI-CPLX (dTDP-L-rhamnose synthetase)
       Reactions:
        dTDP-4-dehydro-6-deoxy-D-glucose + NADH + H+  =  dTDP-alpha-L-rhamnose + NAD+

- EG11979 (rfbC) (b2038)
   Products of gene:
     - DTDPDEHYDRHAMEPIM-MONOMER (dTDP-4-dehydrorhamnose 3,5-epimerase)
       Reactions:
        dTDP-4-dehydro-6-deoxy-D-glucose  =  dTDP-4-dehydro-6-deoxy-L-mannose
         In pathways
         OANTIGEN-PWY (O-antigen building blocks biosynthesis (E. coli))
         PWY-6404 (PWY-6404)
         DTDPRHAMSYN-PWY (dTDP-L-rhamnose biosynthesis I)
     - DTDPRHAMSYNTHMULTI-CPLX (dTDP-L-rhamnose synthetase)
       Reactions:
        dTDP-4-dehydro-6-deoxy-D-glucose + NADH + H+  =  dTDP-alpha-L-rhamnose + NAD+

- EG11978 (rfbA) (b2039)
   Products of gene:
     - DTDPGLUCOSEPP-MONOMER (dTDP-glucose pyrophosphorylase)
       Reactions:
        alpha-D-glucose 1-phosphate + dTTP + H+  =  dTDP-D-glucose + diphosphate
         In pathways
         OANTIGEN-PWY (O-antigen building blocks biosynthesis (E. coli))
         PWY-6404 (PWY-6404)
         DTDPRHAMSYN-PWY (dTDP-L-rhamnose biosynthesis I)
         ECASYN-PWY (enterobacterial common antigen biosynthesis)

- EG11787 (gmd) (b2053)
   Products of gene:
     - GDPMANDEHYDRA-MONOMER (GDP-mannose 4,6-dehydratase)
     - GDPMANDEHYDRA-CPLX (GDP-mannose 4,6-dehydratase)
       Reactions:
        GDP-alpha-D-mannose  ->  GDP-4-dehydro-6-deoxy-D-mannose + H2O
         In pathways
         COLANSYN-PWY (colanic acid building blocks biosynthesis)
         GDPRHAMSYN-PWY (GDPRHAMSYN-PWY)
         PWY-5738 (PWY-5738)
         PWY-5739 (PWY-5739)
         PWY-5740 (PWY-5740)
         PWY-66 (GDP-L-fucose biosynthesis I (from GDP-D-mannose))

- EG11454 (rffH) (b3789)
   Products of gene:
     - DTDPGLUCOSEPP2-MONOMER (dTDP-glucose pyrophosphorylase 2)
       Reactions:
        alpha-D-glucose 1-phosphate + dTTP + H+  =  dTDP-D-glucose + diphosphate
         In pathways
         OANTIGEN-PWY (O-antigen building blocks biosynthesis (E. coli))
         PWY-6404 (PWY-6404)
         DTDPRHAMSYN-PWY (dTDP-L-rhamnose biosynthesis I)
         ECASYN-PWY (enterobacterial common antigen biosynthesis)

- EG11453 (rffG) (b3788)
   Products of gene:
     - DTDPGLUCDEHYDRAT2-MONOMER (dTDP-glucose 4,6-dehydratase 2)
       Reactions:
        dTDP-D-glucose  =  dTDP-4-dehydro-6-deoxy-D-glucose + H2O
         In pathways
         OANTIGEN-PWY (O-antigen building blocks biosynthesis (E. coli))
         PWY-6404 (PWY-6404)
         PWY-3221 (PWY-3221)
         DTDPRHAMSYN-PWY (dTDP-L-rhamnose biosynthesis I)
         ECASYN-PWY (enterobacterial common antigen biosynthesis)

Back to top

ORGANISMS CONTAINING AT LEAST 6 GENES FROM THE GROUP:

Total number of orgs: 245
Effective number of orgs (counting one per cluster within 468 clusters): 192

Organism list
Homologs in each organism in the list
Features enriched in organism list

Follow (ncbi) link, when present, to find the set of organism features for each organism

Org ID	Org Name	# genes in group found in org
YENT393305 ncbi	Yersinia enterocolitica enterocolitica 8081	6
XORY360094 ncbi	Xanthomonas oryzae pv. oryzae PXO99A	7
XORY342109 ncbi	Xanthomonas oryzae pv. oryzae MAFF 311018	6
XORY291331 ncbi	Xanthomonas oryzae pv. oryzae KACC10331	6
XFAS405440 ncbi	Xylella fastidiosa M12	7
XFAS183190 ncbi	Xylella fastidiosa Temecula1	7
XFAS160492 ncbi	Xylella fastidiosa 9a5c	7
XCAM487884	Xanthomonas campestris pv. paulliniae	7
XCAM316273 ncbi	Xanthomonas campestris pv. vesicatoria str. 85-10	7
XCAM314565 ncbi	Xanthomonas campestris pv. campestris str. 8004	7
XCAM190485 ncbi	Xanthomonas campestris pv. campestris str. ATCC 33913	7
XAXO190486 ncbi	Xanthomonas axonopodis pv. citri str. 306	7
XAUT78245 ncbi	Xanthobacter autotrophicus Py2	6
VVUL196600 ncbi	Vibrio vulnificus YJ016	7
VEIS391735 ncbi	Verminephrobacter eiseniae EF01-2	7
TTUR377629 ncbi	Teredinibacter turnerae T7901	7
TSP28240	Thermotoga sp.	7
TPSE340099 ncbi	Thermoanaerobacter pseudethanolicus ATCC 33223	6
TELO197221 ncbi	Thermosynechococcus elongatus BP-1	7
TDEN292415 ncbi	Thiobacillus denitrificans ATCC 25259	7
STYP99287 ncbi	Salmonella enterica enterica serovar Typhimurium str. LT2	7
STHE322159 ncbi	Streptococcus thermophilus LMD-9	6
STHE299768 ncbi	Streptococcus thermophilus CNRZ1066	6
STHE264199 ncbi	Streptococcus thermophilus LMG 18311	6
SSUI391296 ncbi	Streptococcus suis 98HAH33	6
SSUI391295 ncbi	Streptococcus suis 05ZYH33	6
SSP94122 ncbi	Shewanella sp. ANA-3	6
SSP84588 ncbi	Synechococcus sp. WH 8102	7
SSP387093 ncbi	Sulfurovum sp. NBC37-1	7
SSP292414 ncbi	Ruegeria sp. TM1040	7
SSP1131	Synechococcus sp. CC9605	6
SSED425104 ncbi	Shewanella sediminis HAW-EB3	7
SRUB309807 ncbi	Salinibacter ruber DSM 13855	6
SPEA398579 ncbi	Shewanella pealeana ATCC 700345	6
SONE211586 ncbi	Shewanella oneidensis MR-1	6
SMEL266834 ncbi	Sinorhizobium meliloti 1021	7
SMED366394 ncbi	Sinorhizobium medicae WSM419	6
SLOI323850 ncbi	Shewanella loihica PV-4	6
SHIGELLA ncbi	Shigella flexneri 2a str. 2457T	7
SHAL458817 ncbi	Shewanella halifaxensis HAW-EB4	6
SFUM335543 ncbi	Syntrophobacter fumaroxidans MPOB	7
SFLE373384 ncbi	Shigella flexneri 5 str. 8401	7
SFLE198214 ncbi	Shigella flexneri 2a str. 301	7
SENT454169 ncbi	Salmonella enterica enterica serovar Heidelberg str. SL476	7
SENT295319 ncbi	Salmonella enterica enterica serovar Paratyphi A str. ATCC 9150	7
SENT220341 ncbi	Salmonella enterica enterica serovar Typhi str. CT18	7
SENT209261 ncbi	Salmonella enterica enterica serovar Typhi str. Ty2	7
SELO269084 ncbi	Synechococcus elongatus PCC 6301	7
SDYS300267 ncbi	Shigella dysenteriae Sd197	6
SDEN318161 ncbi	Shewanella denitrificans OS217	6
SBOY300268 ncbi	Shigella boydii Sb227	7
SBAL402882 ncbi	Shewanella baltica OS185	7
SBAL399599 ncbi	Shewanella baltica OS195	7
SAGA211110 ncbi	Streptococcus agalactiae NEM316	6
SAGA208435 ncbi	Streptococcus agalactiae 2603V/R	6
SAGA205921 ncbi	Streptococcus agalactiae A909	6
SACI56780 ncbi	Syntrophus aciditrophicus SB	7
RXYL266117 ncbi	Rubrobacter xylanophilus DSM 9941	7
RSPH349101 ncbi	Rhodobacter sphaeroides ATCC 17029	6
RSP101510 ncbi	Rhodococcus jostii RHA1	6
RSOL267608 ncbi	Ralstonia solanacearum GMI1000	6
RRUB269796 ncbi	Rhodospirillum rubrum ATCC 11170	7
RPAL316058 ncbi	Rhodopseudomonas palustris HaA2	7
RPAL316057 ncbi	Rhodopseudomonas palustris BisB5	7
RPAL316056 ncbi	Rhodopseudomonas palustris BisB18	6
RMET266264 ncbi	Ralstonia metallidurans CH34	7
RLEG216596 ncbi	Rhizobium leguminosarum bv. viciae 3841	7
RFER338969 ncbi	Rhodoferax ferrireducens T118	7
REUT381666 ncbi	Ralstonia eutropha H16	7
REUT264198 ncbi	Ralstonia eutropha JMP134	7
RETL347834 ncbi	Rhizobium etli CFN 42	7
RDEN375451 ncbi	Roseobacter denitrificans OCh 114	7
RALB246199	Ruminococcus albus 8	6
PSYR223283 ncbi	Pseudomonas syringae pv. tomato str. DC3000	7
PSYR205918 ncbi	Pseudomonas syringae pv. syringae B728a	7
PSTU379731 ncbi	Pseudomonas stutzeri A1501	6
PSP312153 ncbi	Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1	7
PSP296591 ncbi	Polaromonas sp. JS666	7
PRUM264731 ncbi	Prevotella ruminicola 23	7
PPUT76869 ncbi	Pseudomonas putida GB-1	6
PPUT351746 ncbi	Pseudomonas putida F1	7
PPUT160488 ncbi	Pseudomonas putida KT2440	7
PNAP365044 ncbi	Polaromonas naphthalenivorans CJ2	7
PMEN399739 ncbi	Pseudomonas mendocina ymp	6
PMAR93060 ncbi	Prochlorococcus marinus MIT 9215	7
PMAR74547 ncbi	Prochlorococcus marinus MIT 9313	6
PMAR59920 ncbi	Prochlorococcus marinus NATL2A	7
PMAR167555 ncbi	Prochlorococcus marinus NATL1A	7
PMAR167542 ncbi	Prochlorococcus marinus MIT 9515	6
PLUT319225 ncbi	Chlorobium luteolum DSM 273	7
PINT246198	Prevotella intermedia 17	6
PING357804 ncbi	Psychromonas ingrahamii 37	7
PGIN242619 ncbi	Porphyromonas gingivalis W83	7
PFLU220664 ncbi	Pseudomonas fluorescens Pf-5	7
PFLU216595 ncbi	Pseudomonas fluorescens SBW25	7
PFLU205922 ncbi	Pseudomonas fluorescens Pf0-1	7
PENT384676 ncbi	Pseudomonas entomophila L48	6
PDIS435591 ncbi	Parabacteroides distasonis ATCC 8503	7
PCRY335284 ncbi	Psychrobacter cryohalolentis K5	6
PCAR338963 ncbi	Pelobacter carbinolicus DSM 2380	6
PATL342610 ncbi	Pseudoalteromonas atlantica T6c	6
PARC259536 ncbi	Psychrobacter arcticus 273-4	6
PAER208964 ncbi	Pseudomonas aeruginosa PAO1	7
PAER208963 ncbi	Pseudomonas aeruginosa UCBPP-PA14	7
OCAR504832 ncbi	Oligotropha carboxidovorans OM5	6
OANT439375 ncbi	Ochrobactrum anthropi ATCC 49188	7
NWIN323098 ncbi	Nitrobacter winogradskyi Nb-255	7
NOCE323261 ncbi	Nitrosococcus oceani ATCC 19707	7
NMUL323848 ncbi	Nitrosospira multiformis ATCC 25196	6
NMEN374833 ncbi	Neisseria meningitidis 053442	6
NMEN272831 ncbi	Neisseria meningitidis FAM18	6
NMEN122587 ncbi	Neisseria meningitidis Z2491	6
NMEN122586 ncbi	Neisseria meningitidis MC58	6
NHAM323097 ncbi	Nitrobacter hamburgensis X14	7
NEUT335283 ncbi	Nitrosomonas eutropha C91	7
NEUR228410 ncbi	Nitrosomonas europaea ATCC 19718	6
NARO279238 ncbi	Novosphingobium aromaticivorans DSM 12444	6
MXAN246197 ncbi	Myxococcus xanthus DK 1622	6
MTUB419947 ncbi	Mycobacterium tuberculosis H37Ra	6
MTUB336982 ncbi	Mycobacterium tuberculosis F11	6
MTHE187420 ncbi	Methanothermobacter thermautotrophicus Delta H	6
MTBRV ncbi	Mycobacterium tuberculosis H37Rv	6
MTBCDC ncbi	Mycobacterium tuberculosis CDC1551	6
MSP409	Methylobacterium sp.	7
MSP400668 ncbi	Marinomonas sp. MWYL1	6
MSP266779 ncbi	Chelativorans sp. BNC1	6
MSP189918 ncbi	Mycobacterium sp. KMS	6
MSP164756 ncbi	Mycobacterium sp. MCS	6
MPET420662 ncbi	Methylibium petroleiphilum PM1	7
MMAZ192952 ncbi	Methanosarcina mazei Go1	6
MMAR444158 ncbi	Methanococcus maripaludis C6	6
MMAR402880 ncbi	Methanococcus maripaludis C5	7
MMAR394221 ncbi	Maricaulis maris MCS10	7
MMAR368407 ncbi	Methanoculleus marisnigri JR1	6
MMAG342108 ncbi	Magnetospirillum magneticum AMB-1	7
MLOT266835 ncbi	Mesorhizobium loti MAFF303099	7
MHUN323259 ncbi	Methanospirillum hungatei JF-1	7
MFLA265072 ncbi	Methylobacillus flagellatus KT	7
MEXT419610 ncbi	Methylobacterium extorquens PA1	7
MCAP243233 ncbi	Methylococcus capsulatus Bath	7
MBOV410289 ncbi	Mycobacterium bovis BCG str. Pasteur 1173P2	6
MBOV233413 ncbi	Mycobacterium bovis AF2122/97	6
MBAR269797 ncbi	Methanosarcina barkeri Fusaro	6
MAVI243243 ncbi	Mycobacterium avium 104	6
MAQU351348 ncbi	Marinobacter aquaeolei VT8	6
MAEO419665 ncbi	Methanococcus aeolicus Nankai-3	6
MACE188937 ncbi	Methanosarcina acetivorans C2A	6
MABS561007 ncbi	Mycobacterium abscessus ATCC 19977	6
LPNE400673 ncbi	Legionella pneumophila Corby	7
LPNE297246 ncbi	Legionella pneumophila Paris	7
LPNE297245 ncbi	Legionella pneumophila Lens	6
LPNE272624 ncbi	Legionella pneumophila pneumophila Philadelphia 1	7
LPLA220668 ncbi	Lactobacillus plantarum WCFS1	7
LMES203120 ncbi	Leuconostoc mesenteroides mesenteroides ATCC 8293	6
LJOH257314 ncbi	Lactobacillus johnsonii NCC 533	7
LINT363253 ncbi	Lawsonia intracellularis PHE/MN1-00	7
LINT267671 ncbi	Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130	7
LINT189518 ncbi	Leptospira interrogans serovar Lai str. 56601	7
LGAS324831 ncbi	Lactobacillus gasseri ATCC 33323	7
LCHO395495 ncbi	Leptothrix cholodnii SP-6	7
LBOR355277 ncbi	Leptospira borgpetersenii serovar Hardjo-bovis JB197	7
LBOR355276 ncbi	Leptospira borgpetersenii serovar Hardjo-bovis L550	7
JSP375286 ncbi	Janthinobacterium sp. Marseille	6
JSP290400 ncbi	Jannaschia sp. CCS1	7
HNEP81032	Hyphomonas neptunium	7
HCHE349521 ncbi	Hahella chejuensis KCTC 2396	7
HARS204773 ncbi	Herminiimonas arsenicoxydans	6
GVIO251221 ncbi	Gloeobacter violaceus PCC 7421	7
GURA351605 ncbi	Geobacter uraniireducens Rf4	6
GSUL243231 ncbi	Geobacter sulfurreducens PCA	6
GMET269799 ncbi	Geobacter metallireducens GS-15	6
GFOR411154 ncbi	Gramella forsetii KT0803	7
GBET391165 ncbi	Granulibacter bethesdensis CGDNIH1	7
FSUC59374 ncbi	Fibrobacter succinogenes succinogenes S85	7
FPHI484022 ncbi	Francisella philomiragia philomiragia ATCC 25017	7
FJOH376686 ncbi	Flavobacterium johnsoniae UW101	7
ESP42895	Enterobacter sp.	6
ECOL585057 ncbi	Escherichia coli IAI39	7
ECOL585035 ncbi	Escherichia coli S88	6
ECOL481805 ncbi	Escherichia coli ATCC 8739	7
ECOL469008 ncbi	Escherichia coli BL21(DE3)	7
ECOL413997 ncbi	Escherichia coli B str. REL606	7
ECOL405955 ncbi	Escherichia coli APEC O1	7
ECOL364106 ncbi	Escherichia coli UTI89	7
ECOL331111 ncbi	Escherichia coli E24377A	7
ECOL316407 ncbi	Escherichia coli K-12 substr. W3110	7
ECAR218491 ncbi	Pectobacterium atrosepticum SCRI1043	6
DVUL882 ncbi	Desulfovibrio vulgaris Hildenborough	7
DSHI398580 ncbi	Dinoroseobacter shibae DFL 12	7
DRED349161 ncbi	Desulfotomaculum reducens MI-1	7
DPSY177439 ncbi	Desulfotalea psychrophila LSv54	7
DOLE96561 ncbi	Desulfococcus oleovorans Hxd3	7
DDES207559 ncbi	Desulfovibrio desulfuricans desulfuricans G20	7
DARO159087 ncbi	Dechloromonas aromatica RCB	7
CVIO243365 ncbi	Chromobacterium violaceum ATCC 12472	6
CTEP194439 ncbi	Chlorobium tepidum TLS	6
CSP78	Caulobacter sp.	6
CSP501479	Citreicella sp. SE45	7
CPRO264201 ncbi	Candidatus Protochlamydia amoebophila UWE25	6
CPHY357809 ncbi	Clostridium phytofermentans ISDg	6
CPER195103 ncbi	Clostridium perfringens ATCC 13124	6
CPER195102 ncbi	Clostridium perfringens 13	6
CMET456442 ncbi	Candidatus Methanoregula boonei 6A8	7
CJAP155077	Cellvibrio japonicus	6
CHUT269798 ncbi	Cytophaga hutchinsonii ATCC 33406	7
CCHL340177 ncbi	Chlorobium chlorochromatii CaD3	7
CBOT508765 ncbi	Clostridium botulinum B str. Eklund 17B	7
CBOT498213 ncbi	Clostridium botulinum B1 str. Okra	7
CBEI290402 ncbi	Clostridium beijerinckii NCIMB 8052	6
CAULO ncbi	Caulobacter crescentus CB15	7
CACE272562 ncbi	Clostridium acetobutylicum ATCC 824	7
BXEN266265 ncbi	Burkholderia xenovorans LB400	6
BVIE269482 ncbi	Burkholderia vietnamiensis G4	7
BTHE226186 ncbi	Bacteroides thetaiotaomicron VPI-5482	7
BTHA271848 ncbi	Burkholderia thailandensis E264	7
BSP376	Bradyrhizobium sp.	7
BSP36773	Burkholderia sp.	7
BPUM315750 ncbi	Bacillus pumilus SAFR-032	6
BPSE320373 ncbi	Burkholderia pseudomallei 668	7
BPSE320372 ncbi	Burkholderia pseudomallei 1710b	7
BPSE272560 ncbi	Burkholderia pseudomallei K96243	7
BMAL320389 ncbi	Burkholderia mallei NCTC 10247	7
BMAL320388 ncbi	Burkholderia mallei SAVP1	7
BMAL243160 ncbi	Burkholderia mallei ATCC 23344	7
BFRA295405 ncbi	Bacteroides fragilis YCH46	7
BFRA272559 ncbi	Bacteroides fragilis NCTC 9343	7
BCEN331272 ncbi	Burkholderia cenocepacia HI2424	7
BCEN331271 ncbi	Burkholderia cenocepacia AU 1054	7
BAMB398577 ncbi	Burkholderia ambifaria MC40-6	7
BAMB339670 ncbi	Burkholderia ambifaria AMMD	7
ASP76114 ncbi	Aromatoleum aromaticum EbN1	6
ASP62977 ncbi	Acinetobacter sp. ADP1	6
ASP62928 ncbi	Azoarcus sp. BH72	7
ASP232721 ncbi	Acidovorax sp. JS42	6
ASAL382245 ncbi	Aeromonas salmonicida salmonicida A449	6
AMAR329726 ncbi	Acaryochloris marina MBIC11017	7
AHYD196024	Aeromonas hydrophila dhakensis	7
AFER243159 ncbi	Acidithiobacillus ferrooxidans ATCC 23270	7
AEHR187272 ncbi	Alkalilimnicola ehrlichii MLHE-1	6
ADEH290397 ncbi	Anaeromyxobacter dehalogenans 2CP-C	6
ACRY349163 ncbi	Acidiphilium cryptum JF-5	7
ACAU438753 ncbi	Azorhizobium caulinodans ORS 571	7
ABOR393595 ncbi	Alcanivorax borkumensis SK2	6
ABAU360910 ncbi	Bordetella avium 197N	6
AAVE397945 ncbi	Acidovorax citrulli AAC00-1	6

Names of the homologs of the genes in the group in each of these orgs

	EG12412	EG12411	EG11979	EG11978	EG11787	EG11454	EG11453
YENT393305	YE0173		YE3085	YE0174	YE3075	YE0174	YE0173
XORY360094	XOOORF_4620	XOOORF_4617	XOOORF_4618	XOOORF_4619	XOOORF_4620	XOOORF_4619	XOOORF_4620
XORY342109	XOO0720	XOO0723	XOO0722	XOO0721		XOO0721	XOO0720
XORY291331	XOO0792	XOO0795	XOO0794	XOO0793		XOO0793	XOO0792
XFAS405440	XFASM12_0224	XFASM12_0227	XFASM12_0226	XFASM12_0225	XFASM12_1701	XFASM12_0225	XFASM12_0224
XFAS183190	PD_0208	PD_0211	PD_0210	PD_0209	PD_1545	PD_0209	PD_0208
XFAS160492	XF0255	XF0258	XF0257	XF0256	XF0609	XF0256	XF0255
XCAM487884	XCC-B100_3734	XCC-B100_3731	XCC-B100_3732	XCC-B100_3733	XCC-B100_3744	XCC-B100_3733	XCC-B100_3734
XCAM316273	XCAORF_0769	XCAORF_0773	XCAORF_2294	XCAORF_0771	XCAORF_0759	XCAORF_0771	XCAORF_0769
XCAM314565	XC_3613	XC_3610	XC_3611	XC_3612	XC_3627	XC_3612	XC_3613
XCAM190485	XCC0621	XCC0624	XCC0623	XCC0622	XCC0606	XCC0622	XCC0621
XAXO190486	XAC3585	XAC3582	XAC3583	XAC3584	XAC3585	XAC3584	XAC3585
XAUT78245	XAUT_3554	XAUT_3555	XAUT_3553	XAUT_3556		XAUT_3556	XAUT_3554
VVUL196600	VV0300	VV0302	VV0303	VV0301	VV0349	VV0301	VV0300
VEIS391735	VEIS_0698	VEIS_0697	VEIS_0695	VEIS_0696	VEIS_4859	VEIS_0696	VEIS_0698
TTUR377629	TERTU_4328	TERTU_4329	TERTU_4330	TERTU_4331	TERTU_1313	TERTU_4331	TERTU_4328
TSP28240	TRQ2_0305	TRQ2_0306	TRQ2_0304	TRQ2_0303	TRQ2_0305	TRQ2_0303	TRQ2_0305
TPSE340099	TETH39_1628	TETH39_1626	TETH39_1625	TETH39_1627		TETH39_1627	TETH39_1628
TELO197221	TLL0458	TLR0951	TLL0456	TLL0457	TLL0634	TLL0457	TLL0458
TDEN292415	TBD_1780	TBD_1777	TBD_1778	TBD_1779	TBD_1776	TBD_1779	TBD_1780
STYP99287	STM2097	STM2096	STM2094	STM2095	STM2109	STM2095	STM3922
STHE322159	STER_1222	STER_1444	STER_0656	STER_1224		STER_1224	STER_1222
STHE299768	STR1242	STR1483	STR1243	STR1244		STR1244	STR1242
STHE264199	STU1242	STU1483	STU1243	STU1244		STU1244	STU1242
SSUI391296	SSU98_1313	SSU98_1311	SSU98_1315	SSU98_1316		SSU98_1316	SSU98_1313
SSUI391295	SSU05_1298	SSU05_1296	SSU05_1300	SSU05_1301		SSU05_1301	SSU05_1298
SSP94122	SHEWANA3_1379	SHEWANA3_1381	SHEWANA3_1382	SHEWANA3_1380		SHEWANA3_1380	SHEWANA3_1379
SSP84588	SYNW0646OR1992	SYNW0647OR1991	SYNW0648OR1990	SYNW0649OR1989	SYNW0422OR1394	SYNW0649OR1989	SYNW0646OR1992
SSP387093	SUN_1552	SUN_1715	SUN_1716	SUN_1554	SUN_0342	SUN_1554	SUN_1552
SSP292414	TM1040_3861	TM1040_3860	TM1040_3863	TM1040_3859	TM1040_1482	TM1040_3859	TM1040_3861
SSP1131	SYNCC9605_2035	SYNCC9605_2034	SYNCC9605_2033	SYNCC9605_2032		SYNCC9605_2032	SYNCC9605_2035
SSED425104	SSED_2990	SSED_3011	SSED_3012	SSED_3013	SSED_0107	SSED_3013	SSED_2990
SRUB309807	SRU_0588	SRU_0591	SRU_0590	SRU_0589		SRU_0589	SRU_0588
SPEA398579	SPEA_1398	SPEA_1437	SPEA_1420	SPEA_1399		SPEA_1399	SPEA_1398
SONE211586	SO_3188	SO_1653	SO_3160	SO_3186		SO_3186	SO_3188
SMEL266834	SMB21326	SMB21327	SMB21325	SMB21324	SMB21326	SMB21324	SMB21326
SMED366394	SMED_4723	SMED_4811	SMED_4813	SMED_4721		SMED_4814	SMED_4812
SLOI323850	SHEW_1401	SHEW_1403	SHEW_1404	SHEW_1402		SHEW_1402	SHEW_1401
SHIGELLA	RFBB	RFBD	RFBC	RFBA	GMD	RFFH	RFFG
SHAL458817	SHAL_1486	SHAL_1488	SHAL_1489	SHAL_1487		SHAL_1487	SHAL_1486
SFUM335543	SFUM_2264	SFUM_2262	SFUM_2265	SFUM_2263	SFUM_3362	SFUM_2263	SFUM_2264
SFLE373384	SFV_2098	SFV_2097	SFV_2095	SFV_2096	SFV_2110	SFV_3715	SFV_3716
SFLE198214	AAN43643.1	AAN43642.1	AAN43640.1	AAN43641.1	AAN43655.1	AAN45300.1	AAN45299.1
SENT454169	SEHA_C2323	SEHA_C2322	SEHA_C2320	SEHA_C2321	SEHA_C2335	SEHA_C2321	SEHA_C4251
SENT295319	SPA0769	SPA0770	SPA0772	SPA0771	SPA0757	SPA3763	SPA3762
SENT220341	STY2307	STY2306	STY2304	STY2305	STY2321	STY3632	STY3633
SENT209261	T0775	T0776	T0778	T0777	T0763	T3374	T3375
SELO269084	SYC1993_C	SYC1994_C	SYC1995_C	SYC1992_C	SYC0211_C	SYC1992_C	SYC1993_C
SDYS300267	SDY_2204	SDY_2205	SDY_2207	SDY_2206		SDY_3959	SDY_2204
SDEN318161	SDEN_2663	SDEN_2661	SDEN_2660	SDEN_2662		SDEN_2662	SDEN_2663
SBOY300268	SBO_3799	SBO_0867	SBO_0865	SBO_0866	SBO_0880	SBO_3800	SBO_3799
SBAL402882	SHEW185_2900	SHEW185_1468	SHEW185_2898	SHEW185_2899	SHEW185_2973	SHEW185_2899	SHEW185_2900
SBAL399599	SBAL195_3030	SBAL195_1504	SBAL195_3011	SBAL195_3029	SBAL195_3117	SBAL195_3029	SBAL195_3030
SAGA211110	GBS1271	GBS1494	GBS1272	GBS1273		GBS1273	GBS1271
SAGA208435	SAG_1198	SAG_1424	SAG_1199	SAG_1200		SAG_1200	SAG_1198
SAGA205921	SAK_1285	SAK_1459	SAK_1286	SAK_1287		SAK_1287	SAK_1285
SACI56780	SYN_02866	SYN_01394	SYN_02650	SYN_02647	SYN_00584	SYN_02647	SYN_02866
RXYL266117	RXYL_3122	RXYL_3106	RXYL_3120	RXYL_3121	RXYL_0567	RXYL_3121	RXYL_3122
RSPH349101	RSPH17029_4078	RSPH17029_4077	RSPH17029_4079	RSPH17029_4076		RSPH17029_4076	RSPH17029_4078
RSP101510		RHA1_RO06305	RHA1_RO05744	RHA1_RO04097	RHA1_RO05444	RHA1_RO04097	RHA1_RO04098
RSOL267608	RSC0682	RSC0683	RSC0685	RSC0684		RSC0684	RSC0682
RRUB269796	RRU_B0050	RRU_B0049	RRU_B0038	RRU_B0048	RRU_A0253	RRU_B0048	RRU_B0050
RPAL316058	RPB_1562	RPB_1564	RPB_1563	RPB_1565	RPB_1525	RPB_1565	RPB_1562
RPAL316057	RPD_1571	RPD_1573	RPD_1572	RPD_1574	RPD_1647	RPD_1574	RPD_1571
RPAL316056	RPC_4187	RPC_4188	RPC_4207	RPC_4186		RPC_4186	RPC_4187
RMET266264	RMET_2735	RMET_2734	RMET_2732	RMET_2733	RMET_5860	RMET_2733	RMET_2735
RLEG216596	RL1625	RL1624	RL1626	RL1623	RL0825	RL1623	RL1625
RFER338969	RFER_0715	RFER_0714	RFER_2678	RFER_2677	RFER_1237	RFER_2677	RFER_0715
REUT381666	H16_A1851	H16_A2908	H16_A1848	H16_A1864	H16_A2900	H16_A1864	H16_A1851
REUT264198	REUT_A0712	REUT_A0713	REUT_A0715	REUT_A0714	REUT_A0719	REUT_A0714	REUT_A0712
RETL347834	RHE_CH01514	RHE_CH01513	RHE_CH01515	RHE_CH01512	RHE_CH00762	RHE_CH01512	RHE_CH01514
RDEN375451	RD1_B0019	RD1_B0018	RD1_B0020	RD1_B0017	RD1_B0019	RD1_B0017	RD1_B0019
RALB246199	GRAORF_3496	GRAORF_3497	GRAORF_3495	GRAORF_3494		GRAORF_3494	GRAORF_3496
PSYR223283	PSPTO_1081	PSPTO_1080	PSPTO_1077	PSPTO_1079	PSPTO_1005	PSPTO_1079	PSPTO_1081
PSYR205918	PSYR_4935	PSYR_0925	PSYR_4936	PSYR_0924	PSYR_0916	PSYR_0924	PSYR_4935
PSTU379731	PST_0084	PST_0081	PST_0082	PST_0083		PST_0083	PST_0084
PSP312153	PNUC_0253	PNUC_0254	PNUC_0256	PNUC_0255	PNUC_0302	PNUC_0255	PNUC_0253
PSP296591	BPRO_4022	BPRO_4021	BPRO_4017	BPRO_4018	BPRO_4012	BPRO_4018	BPRO_4022
PRUM264731	GFRORF0173	GFRORF0238	GFRORF0085	GFRORF0229	GFRORF1377	GFRORF0229	GFRORF0173
PPUT76869	PPUTGB1_1380	PPUTGB1_1381	PPUTGB1_0290	PPUTGB1_1382		PPUTGB1_1382	PPUTGB1_1380
PPUT351746	PPUT_3935	PPUT_3934	PPUT_3923	PPUT_3933	PPUT_3935	PPUT_3933	PPUT_3935
PPUT160488	PP_1785	PP_1784	PP_1782	PP_1783	PP_1799	PP_1783	PP_1785
PNAP365044	PNAP_3491	PNAP_3490	PNAP_3488	PNAP_3489	PNAP_3190	PNAP_3489	PNAP_3491
PMEN399739	PMEN_4289	PMEN_4292	PMEN_4291	PMEN_4290		PMEN_4290	PMEN_4289
PMAR93060	P9215_14531	P9215_14521	P9215_14511	P9215_14411	P9215_14141	P9215_14411	P9215_14531
PMAR74547	PMT0115	PMT0114	PMT0113	PMT0112		PMT0112	PMT0115
PMAR59920	PMN2A_1236	PMN2A_1239	PMN2A_1240	PMN2A_1237	PMN2A_1221	PMN2A_1237	PMN2A_1236
PMAR167555	NATL1_08571	NATL1_08561	NATL1_08551	NATL1_21091	NATL1_20961	NATL1_21091	NATL1_08571
PMAR167542	P9515ORF_0158		P9515ORF_1474	P9515ORF_1473	P9515ORF_1431	P9515ORF_1473	P9515ORF_0158
PLUT319225	PLUT_0419	PLUT_0418	PLUT_0417	PLUT_0416	PLUT_1863	PLUT_0416	PLUT_0419
PINT246198		PIN_A1819	PIN_A1898	PIN_A1970	PIN_A1552	PIN_A1970	PIN_A1891
PING357804	PING_3465	PING_3463	PING_3462	PING_3464	PING_0770	PING_3464	PING_3465
PGIN242619	PG_1560	PG_1561	PG_1562	PG_1563	PG_1288	PG_1563	PG_1560
PFLU220664	PFL_0305	PFL_0302	PFL_0303	PFL_0304	PFL_5491	PFL_0304	PFL_0305
PFLU216595	PFLU0291	PFLU0288	PFLU0289	PFLU0290	PFLU3668	PFLU0290	PFLU0291
PFLU205922	PFL_4058	PFL_4057	PFL_0289	PFL_4056	PFL_5682	PFL_4056	PFL_4058
PENT384676	PSEEN0253	PSEEN0250	PSEEN0251	PSEEN0252		PSEEN4744	PSEEN0253
PDIS435591	BDI_3616	BDI_2511	BDI_1833	BDI_0650	BDI_0652	BDI_0650	BDI_3616
PCRY335284	PCRYO_0624	PCRYO_0627	PCRYO_0626	PCRYO_0625		PCRYO_0625	PCRYO_0624
PCAR338963	PCAR_2593	PCAR_2594	PCAR_2596	PCAR_2595		PCAR_2595	PCAR_2593
PATL342610	PATL_2132	PATL_2129	PATL_2130	PATL_2131		PATL_2131	PATL_2132
PARC259536	PSYC_1212	PSYC_1213	PSYC_1215	PSYC_1214		PSYC_1214	PSYC_1212
PAER208964	PA5161	PA5162	PA5164	PA5163	PA5453	PA5163	PA5161
PAER208963	PA14_68170	PA14_68190	PA14_68210	PA14_68200	PA14_71990	PA14_68200	PA14_68170
OCAR504832	OCAR_4553	OCAR_4552	OCAR_4550	OCAR_4551		OCAR_4551	OCAR_4553
OANT439375	OANT_2719	OANT_2718	OANT_2720	OANT_2721	OANT_3372	OANT_2721	OANT_2719
NWIN323098	NWI_0544	NWI_0547	NWI_0546	NWI_0545	NWI_2385	NWI_0545	NWI_0544
NOCE323261	NOC_0773	NOC_0776	NOC_0775	NOC_0774	NOC_1523	NOC_0774	NOC_0773
NMUL323848	NMUL_A0264	NMUL_A0265	NMUL_A0267	NMUL_A0266		NMUL_A0266	NMUL_A0264
NMEN374833	NMCC_0087	NMCC_0720	NMCC_0069	NMCC_0088		NMCC_0088	NMCC_0087
NMEN272831	NMC0063	NMC0708	NMC0065	NMC0064		NMC0064	NMC0063
NMEN122587	NMA0204	NMA0967	NMA0206	NMA0205		NMA0205	NMA0204
NMEN122586	NMB_0079	NMB_0756	NMB_0081	NMB_0080		NMB_0080	NMB_0079
NHAM323097	NHAM_1058	NHAM_1061	NHAM_1060	NHAM_3052	NHAM_2780	NHAM_3052	NHAM_1058
NEUT335283	NEUT_2400	NEUT_2401	NEUT_2244	NEUT_1880	NEUT_0156	NEUT_1880	NEUT_2400
NEUR228410	NE0469	NE1023	NE0678	NE0677		NE0677	NE0469
NARO279238	SARO_3235	SARO_3236	SARO_3237	SARO_3238		SARO_3238	SARO_3235
MXAN246197		MXAN_4612	MXAN_4610	MXAN_4611	MXAN_5327	MXAN_4611	MXAN_4613
MTUB419947		MRA_3307	MRA_3506	MRA_0343	MRA_1523	MRA_0343	MRA_3505
MTUB336982		TBFG_13295	TBFG_13502	TBFG_10339	TBFG_11545	TBFG_10339	TBFG_13501
MTHE187420		MTH1792	MTH1790	MTH1791	MTH333	MTH1791	MTH1789
MTBRV		RV3266C	RV3465	RV0334	RV1511	RV0334	RV3464
MTBCDC		MT3366	MT3571	MT0348	MT1561	MT0348	MT3570
MSP409	M446_5836	M446_5837	M446_5835	M446_5838	M446_5189	M446_5838	M446_5836
MSP400668	MMWYL1_0837	MMWYL1_0840	MMWYL1_0839	MMWYL1_0838		MMWYL1_0838	MMWYL1_0837
MSP266779	MESO_2762	MESO_2763	MESO_2761	MESO_2760		MESO_2760	MESO_2762
MSP189918		MKMS_1336	MKMS_1081	MKMS_0446	MKMS_0963	MKMS_0446	MKMS_1082
MSP164756		MMCS_1319	MMCS_1065	MMCS_0436	MMCS_0945	MMCS_0436	MMCS_1066
MPET420662	MPE_A0628	MPE_A0627	MPE_A0625	MPE_A0626	MPE_A2731	MPE_A0626	MPE_A0628
MMAZ192952	MM1167	MM1168	MM1166	MM2216	MM0659	MM2216
MMAR444158	MMARC6_0590	MMARC6_0589	MMARC6_0592	MMARC6_0591		MMARC6_0591	MMARC6_0590
MMAR402880	MMARC5_1314	MMARC5_1313	MMARC5_1316	MMARC5_1315	MMARC5_1306	MMARC5_1315	MMARC5_1314
MMAR394221	MMAR10_2456	MMAR10_2455	MMAR10_2457	MMAR10_2458	MMAR10_2456	MMAR10_2458	MMAR10_2456
MMAR368407	MEMAR_0186	MEMAR_0187		MEMAR_0188	MEMAR_0204	MEMAR_0188	MEMAR_0186
MMAG342108	AMB0058	AMB1473	AMB0049	AMB0059	AMB1077	AMB0059	AMB0058
MLOT266835	MLR7552	MLR7553	MLR7551	MLR7550	MLR5849	MLR7550	MLR7552
MHUN323259	MHUN_3072	MHUN_3073	MHUN_3074	MHUN_3075	MHUN_2132	MHUN_3075	MHUN_3072
MFLA265072	MFLA_2008	MFLA_2011	MFLA_2010	MFLA_2009	MFLA_1271	MFLA_2009	MFLA_2008
MEXT419610	MEXT_3691	MEXT_3692	MEXT_2392	MEXT_2395	MEXT_3560	MEXT_2395	MEXT_3691
MCAP243233	MCA_1282	MCA_1285	MCA_1284	MCA_1283	MCA_1146	MCA_1283	MCA_1282
MBOV410289		BCG_3295C	BCG_3530	BCG_0373	BCG_3692C	BCG_0373	BCG_3529
MBOV233413		MB3294C	MB3494	MB0341	MB3658C	MB0341	MB3493
MBAR269797	MBAR_A0231	MBAR_A0232	MBAR_A0230	MBAR_A0233	MBAR_A0034	MBAR_A0233
MAVI243243		MAV_4231	MAV_4407	MAV_4820	MAV_0524	MAV_4820	MAV_4406
MAQU351348	MAQU_2631	MAQU_2630	MAQU_2628	MAQU_2629		MAQU_2629	MAQU_2631
MAEO419665	MAEO_0380	MAEO_0381	MAEO_0383	MAEO_0379	MAEO_0397	MAEO_0379
MACE188937	MA3779	MA3778	MA3780	MA2183	MA1173	MA2183
MABS561007		MAB_3613C	MAB_3780	MAB_4113	MAB_0503	MAB_4113	MAB_3779
LPNE400673	LPC_2534	LPC_2535	LPC_2536	LPC_2532	LPC_2534	LPC_2532	LPC_2534
LPNE297246	LPP0824	LPP0823	LPP0822	LPP0826	LPP0824	LPP0826	LPP0824
LPNE297245	LPL0795	LPL0794	LPL0793	LPL0797		LPL0797	LPL0795
LPNE272624	LPG0758	LPG0757	LPG0756	LPG0760	LPG0758	LPG0760	LPG0758
LPLA220668	LP_1189	LP_1190	LP_1188	LP_1186	LP_2105	LP_1186	LP_1189
LMES203120	LEUM_1421	LEUM_1420	LEUM_1422	LEUM_1423		LEUM_1423	LEUM_1421
LJOH257314	LJ_1049	LJ_1052	LJ_1051	LJ_1050	LJ_1049	LJ_1050	LJ_1049
LINT363253	LI1066	LI1065	LIC004	LI0577	LIC082	LI0577	LI1066
LINT267671	LIC_12124	LIC_12125	LIC_12126	LIC_12123	LIC_13168	LIC_12123	LIC_12124
LINT189518	LA1661	LA1660	LA1659	LA1662	LA3963	LA1662	LA1661
LGAS324831	LGAS_1136	LGAS_1133	LGAS_1134	LGAS_1135	LGAS_1136	LGAS_1135	LGAS_1136
LCHO395495	LCHO_0619	LCHO_0620	LCHO_0622	LCHO_0621	LCHO_2349	LCHO_0621	LCHO_0619
LBOR355277	LBJ_1183	LBJ_1182	LBJ_1181	LBJ_1184	LBJ_0410	LBJ_1184	LBJ_1183
LBOR355276	LBL_1237	LBL_1236	LBL_1235	LBL_1238	LBL_2667	LBL_1238	LBL_1237
JSP375286	MMA_2253	MMA_2250	MMA_2251	MMA_2252		MMA_2252	MMA_2253
JSP290400	JANN_3843	JANN_3842	JANN_3844	JANN_3841	JANN_4280	JANN_3841	JANN_3843
HNEP81032	HNE_0790	HNE_0780	HNE_0779	HNE_0789	HNE_0793	HNE_0789	HNE_0790
HCHE349521	HCH_02406	HCH_02410	HCH_02409	HCH_02408	HCH_04838	HCH_02408	HCH_02406
HARS204773	HEAR1152	HEAR1155	HEAR1154	HEAR1153		HEAR1153	HEAR1152
GVIO251221	GLR0468	GLR3234	GLL3702	GLL1783	GLL0763	GLL1783	GLR3235
GURA351605	GURA_3273	GURA_3272		GURA_2862	GURA_3210	GURA_2862	GURA_3273
GSUL243231	GSU_2366	GSU_2365		GSU_2083	GSU_0626	GSU_2083	GSU_2366
GMET269799	GMET_2473	GMET_2472		GMET_0924	GMET_1311	GMET_0924	GMET_2473
GFOR411154	GFO_2037	GFO_3286	GFO_3287	GFO_2036	GFO_0553	GFO_2036	GFO_2037
GBET391165	GBCGDNIH1_0102	GBCGDNIH1_0105	GBCGDNIH1_0104	GBCGDNIH1_0103	GBCGDNIH1_2354	GBCGDNIH1_0103	GBCGDNIH1_0102
FSUC59374	FSU1219	FSU2869	FSU1218	FSU1220	FSU2786	FSU1220	FSU1219
FPHI484022	FPHI_1253	FPHI_1252	FPHI_1251	FPHI_1250	FPHI_1247	FPHI_1250	FPHI_1253
FJOH376686	FJOH_0354	FJOH_0332	FJOH_0333	FJOH_0331	FJOH_0330	FJOH_0331	FJOH_0354
ESP42895	ENT638_2653		ENT638_2651	ENT638_2652	ENT638_2667	ENT638_2652	ENT638_2653
ECOL585057	ECIAI39_2999	ECIAI39_0975	ECIAI39_0977	ECIAI39_0976	ECIAI39_0962	ECIAI39_2998	ECIAI39_2999
ECOL585035	ECS88_2138		ECS88_2137	ECS88_2130	ECS88_2150	ECS88_4211	ECS88_4210
ECOL481805	ECOLC_1601	ECOLC_1602	ECOLC_1604	ECOLC_1603	ECOLC_1588	ECOLC_4214	ECOLC_4215
ECOL469008	ECBD_1614	ECBD_1615	ECBD_1617	ECBD_1616	ECBD_1602	ECBD_4250	ECBD_1614
ECOL413997	ECB_03666	ECB_01946	ECB_01944	ECB_01945	ECB_01959	ECB_03667	ECB_03666
ECOL405955	APECO1_1131	APECO1_1130	APECO1_1128	APECO1_1129	APECO1_1143	APECO1_2686	APECO1_1131
ECOL364106	UTI89_C2312	UTI89_C2311	UTI89_C2309	UTI89_C2310	UTI89_C2327	UTI89_C4345	UTI89_C4344
ECOL331111	ECE24377A_2332	ECE24377A_2331	ECE24377A_2329	ECE24377A_2330	ECE24377A_2346	ECE24377A_4300	ECE24377A_4299
ECOL316407	ECK3780:JW5598:B3788	ECK2034:JW2025:B2040	ECK2032:JW2023:B2038	ECK2033:JW2024:B2039	ECK2047:JW2038:B2053	ECK3781:JW3763:B3789	ECK3780:JW5598:B3788
ECAR218491	ECA4206	ECA1440	ECA1441	ECA1442		ECA1442	ECA4206
DVUL882	DVU_1364	DVU_1363	DVU_0698	DVU_0925	DVU_0448	DVU_0925	DVU_1364
DSHI398580	DSHI_4115	DSHI_4117	DSHI_4114	DSHI_4118	DSHI_4139	DSHI_4118	DSHI_4115
DRED349161	DRED_3035	DRED_3036	DRED_3037	DRED_3038	DRED_3135	DRED_3038	DRED_3035
DPSY177439	DP0045	DP2222	DP2223	DP0044	DP0025	DP0044	DP0045
DOLE96561	DOLE_1010	DOLE_2525	DOLE_1012	DOLE_1011	DOLE_1281	DOLE_1011	DOLE_1010
DDES207559	DDE_2182	DDE_2183	DDE_2930	DDE_2693	DDE_0432	DDE_2693	DDE_2182
DARO159087	DARO_1237	DARO_1741	DARO_1239	DARO_1238	DARO_1237	DARO_1238	DARO_1237
CVIO243365	CV_4010	CV_4011	CV_4013	CV_4012		CV_4012	CV_4010
CTEP194439	CT_0308	CT_0307	CT_0306	CT_0305		CT_0305	CT_0308
CSP78	CAUL_4912	CAUL_4911	CAUL_4942	CAUL_4910		CAUL_4910	CAUL_4912
CSP501479	CSE45_5489	CSE45_5490	CSE45_5488	CSE45_5491	CSE45_5452	CSE45_5491	CSE45_5489
CPRO264201	PC0126	PC0125	PC0124	PC0123		PC0123	PC0126
CPHY357809	CPHY_3680	CPHY_3679	CPHY_3678	CPHY_3681		CPHY_3681	CPHY_3680
CPER195103	CPF_0482	CPF_0599	CPF_0598	CPF_0597		CPF_0597	CPF_0600
CPER195102	CPE0619	CPE0618	CPE0617	CPE0616		CPE0616	CPE0619
CMET456442	MBOO_1749	MBOO_1750	MBOO_1751	MBOO_1752	MBOO_1762	MBOO_1752	MBOO_1749
CJAP155077	CJA_3435	CJA_3437	CJA_3438	CJA_3436		CJA_3436	CJA_3435
CHUT269798	CHU_3391	CHU_0494	CHU_3843	CHU_3390	CHU_0059	CHU_3390	CHU_3391
CCHL340177	CAG_0516	CAG_0515	CAG_0514	CAG_0512	CAG_0652	CAG_0512	CAG_0516
CBOT508765	CLL_A3251	CLL_A3249	CLL_A3252	CLL_A3253	CLL_A1537	CLL_A3253	CLL_A3251
CBOT498213	CLD_1863	CLD_1862	CLD_1864	CLD_1861	CLD_1859	CLD_1861	CLD_1863
CBEI290402	CBEI_4754	CBEI_4752	CBEI_2601	CBEI_4756		CBEI_4756	CBEI_4754
CAULO	CC3629	CC3615	CC3633	CC1141	CC1010	CC1141	CC3629
CACE272562	CAC2332	CAC2315	CAC2331	CAC2333	CAC2180	CAC2333	CAC2332
BXEN266265	BXE_B1714		BXE_C1092	BXE_B1715	BXE_C1085	BXE_B1715	BXE_B1714
BVIE269482	BCEP1808_3218	BCEP1808_3216	BCEP1808_3214	BCEP1808_3215	BCEP1808_6523	BCEP1808_3215	BCEP1808_3218
BTHE226186	BT_0466	BT_1730	BT_0828	BT_0463	BT_1224	BT_0463	BT_0466
BTHA271848	BTH_I1469	BTH_I1472	BTH_I1471	BTH_I1470	BTH_I1331	BTH_I1470	BTH_I1469
BSP376	BRADO7029	BRADO7026	BRADO7027	BRADO7028	BRADO5260	BRADO7028	BRADO7029
BSP36773	BCEP18194_A3969	BCEP18194_A3972	BCEP18194_A3971	BCEP18194_A3970	BCEP18194_B2115	BCEP18194_A3970	BCEP18194_A3969
BPUM315750	BPUM_3226	BPUM_3427		BPUM_3227	BPUM_0677	BPUM_3227	BPUM_3226
BPSE320373	BURPS668_3105	BURPS668_3101	BURPS668_3102	BURPS668_3103	BURPS668_A2434	BURPS668_3103	BURPS668_3105
BPSE320372	BURPS1710B_A3427	BURPS1710B_A3424	BURPS1710B_A3425	BURPS1710B_A3426	BURPS1710B_B0897	BURPS1710B_A3426	BURPS1710B_A3427
BPSE272560	BPSL2686	BPSL2683	BPSL2684	BPSL2685	BPSS1688	BPSL2685	BPSL2686
BMAL320389	BMA10247_1852	BMA10247_1849	BMA10247_1850	BMA10247_1851	BMA10247_A0540	BMA10247_1851	BMA10247_1852
BMAL320388	BMASAVP1_A0923	BMASAVP1_A0926	BMASAVP1_A0925	BMASAVP1_A0924	BMASAVP1_1660	BMASAVP1_A0924	BMASAVP1_A0923
BMAL243160	BMA_1990	BMA_1987	BMA_1988	BMA_1989	BMA_A1709	BMA_1989	BMA_1990
BFRA295405	BF0807	BF1310	BF2296	BF1094	BF1823	BF2583	BF0807
BFRA272559	BF3504	BF1296	BF2385	BF3453	BF1888	BF1011	BF3504
BCEN331272	BCEN2424_0871	BCEN2424_0874	BCEN2424_0873	BCEN2424_0872	BCEN2424_0880	BCEN2424_6649	BCEN2424_0871
BCEN331271	BCEN_0389	BCEN_0392	BCEN_0391	BCEN_0390	BCEN_0400	BCEN_0390	BCEN_0389
BAMB398577	BAMMC406_0761	BAMMC406_0764	BAMMC406_0763	BAMMC406_0762	BAMMC406_3863	BAMMC406_0762	BAMMC406_0761
BAMB339670	BAMB_0751	BAMB_0754	BAMB_0753	BAMB_0752	BAMB_3358	BAMB_0752	BAMB_0751
ASP76114	EBA1518	EBA2273	EBA2275	EBA2277		EBA2277	EBA1518
ASP62977	ACIAD0076	ACIAD0078	ACIAD0080	ACIAD0079		ACIAD0079	ACIAD0076
ASP62928	AZO1877	AZO1876	AZO1874	AZO1875	AZO3587	AZO1875	AZO1877
ASP232721	AJS_0537	AJS_0538	AJS_0540	AJS_0539		AJS_0539	AJS_0537
ASAL382245	ASA_1422	ASA_1423	ASA_1425	ASA_1424		ASA_1424	ASA_1422
AMAR329726	AM1_0405	AM1_0803	AM1_0403	AM1_0404	AM1_5749	AM1_0404	AM1_0405
AHYD196024	AHA_2908	AHA_2907	AHA_2905	AHA_2906	AHA_2902	AHA_2906	AHA_2908
AFER243159	AFE_2596	AFE_2595	AFE_3039	AFE_3038	AFE_0133	AFE_3038	AFE_2596
AEHR187272	MLG_2317	MLG_2318	MLG_2320	MLG_2319		MLG_2319	MLG_2317
ADEH290397		ADEH_4291	ADEH_4289	ADEH_4290	ADEH_4287	ADEH_4290	ADEH_4288
ACRY349163	ACRY_1214	ACRY_1217	ACRY_1216	ACRY_1215	ACRY_0508	ACRY_1215	ACRY_1214
ACAU438753	AZC_1833	AZC_1832	AZC_1834	AZC_1831	AZC_0054	AZC_1831	AZC_1833
ABOR393595	ABO_0910	ABO_0911	ABO_0914	ABO_0913		ABO_0913	ABO_0910
ABAU360910	BAV1243	BAV0123	BAV0124	BAV1244		BAV1244	BAV1243
AAVE397945	AAVE_4166	AAVE_4165	AAVE_4163	AAVE_4164		AAVE_4164	AAVE_4166

Organism features enriched in list (features available for 231 out of the 245 orgs in the list)

Feature	Pvalue	Num occurrences in list	Total num occurrences
Arrangment:Chains	0.0006063	23	92
Disease:Opportunistic_infections	0.0095118	5	5
Endospores:No	0.0000895	63	211
Endospores:Yes	0.0031406	12	53
GC_Content_Range4:0-40	6.942e-18	37	213
GC_Content_Range4:60-100	3.457e-12	93	145
GC_Content_Range7:0-30	0.0000240	6	47
GC_Content_Range7:30-40	1.108e-11	31	166
GC_Content_Range7:50-60	0.0000264	61	107
GC_Content_Range7:60-70	2.909e-14	91	134
Genome_Size_Range5:0-2	2.077e-21	15	155
Genome_Size_Range5:4-6	3.802e-11	109	184
Genome_Size_Range5:6-10	1.779e-6	34	47
Genome_Size_Range9:1-2	7.492e-15	15	128
Genome_Size_Range9:2-3	0.0013948	34	120
Genome_Size_Range9:4-5	4.276e-7	60	96
Genome_Size_Range9:5-6	0.0003982	49	88
Genome_Size_Range9:6-8	1.880e-6	29	38
Gram_Stain:Gram_Neg	1.569e-8	164	333
Gram_Stain:Gram_Pos	6.726e-7	35	150
Habitat:Host-associated	0.0038102	68	206
Habitat:Specialized	0.0069524	13	53
Motility:Yes	0.0001036	127	267
Optimal_temp.:25-30	0.0003987	15	19
Optimal_temp.:30	0.0013333	12	15
Oxygen_Req:Aerobic	0.0051159	86	185
Pathogenic_in:Human	5.033e-7	57	213
Pathogenic_in:No	0.0004175	108	226
Pathogenic_in:Plant	0.0063452	11	15
Shape:Coccus	0.0035027	22	82
Shape:Rod	9.128e-10	172	347
Shape:Spiral	0.0031589	6	34
Temp._range:Mesophilic	0.0005223	202	473

ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 195
Effective number of orgs (counting one per cluster within 468 clusters): 159

Organism list
Homologs in each organism in the list
Features enriched in organism list

Follow (ncbi) link, when present, to find the set of organism features for each organism

Org ID	Org Name	# genes in group found in org
ZMOB264203 ncbi	Zymomonas mobilis mobilis ZM4	0
WSUC273121 ncbi	Wolinella succinogenes DSM 1740	0
WPIP955	Wolbachia pipientis	0
WPIP80849	Wolbachia endosymbiont of Brugia malayi	0
VVUL216895 ncbi	Vibrio vulnificus CMCP6	0
VCHO345073 ncbi	Vibrio cholerae O395	1
VCHO ncbi	Vibrio cholerae O1 biovar El Tor str. N16961	1
UURE95667	Ureaplasma urealyticum serovar 13	0
UURE95664	Ureaplasma urealyticum serovar 10	0
UPAR505682 ncbi	Ureaplasma parvum serovar 3 str. ATCC 27815	0
TTHE300852 ncbi	Thermus thermophilus HB8	1
TTHE262724 ncbi	Thermus thermophilus HB27	1
TTEN273068 ncbi	Thermoanaerobacter tengcongensis MB4	0
TSP1755	Thermoanaerobacter sp.	0
TPET390874 ncbi	Thermotoga petrophila RKU-1	0
TPEN368408 ncbi	Thermofilum pendens Hrk 5	1
TPAL243276 ncbi	Treponema pallidum pallidum Nichols	0
TMAR243274 ncbi	Thermotoga maritima MSB8	0
TLET416591 ncbi	Thermotoga lettingae TMO	0
TKOD69014 ncbi	Thermococcus kodakarensis KOD1	0
TFUS269800 ncbi	Thermobifida fusca YX	0
TDEN326298 ncbi	Sulfurimonas denitrificans DSM 1251	1
TACI273075 ncbi	Thermoplasma acidophilum DSM 1728	0
SWOL335541 ncbi	Syntrophomonas wolfei wolfei Goettingen	0
STHE292459 ncbi	Symbiobacterium thermophilum IAM 14863	1
SSP64471 ncbi	Synechococcus sp. CC9311	1
SSP321332 ncbi	Synechococcus sp. JA-2-3Ba(2-13)	1
SSP321327 ncbi	Synechococcus sp. JA-3-3Ab	1
SSAP342451 ncbi	Staphylococcus saprophyticus saprophyticus ATCC 15305	0
SPNE488221 ncbi	Streptococcus pneumoniae 70585	0
SPNE1313	Streptococcus pneumoniae	0
SMAR399550 ncbi	Staphylothermus marinus F1	0
SLAC55218	Ruegeria lacuscaerulensis	1
SHAE279808 ncbi	Staphylococcus haemolyticus JCSC1435	0
SEPI176280 ncbi	Staphylococcus epidermidis ATCC 12228	0
SEPI176279 ncbi	Staphylococcus epidermidis RP62A	0
SCO ncbi	Streptomyces coelicolor A3(2)	1
SAUR93062 ncbi	Staphylococcus aureus aureus COL	0
SAUR93061 ncbi	Staphylococcus aureus aureus NCTC 8325	0
SAUR426430 ncbi	Staphylococcus aureus aureus Newman	0
SAUR418127 ncbi	Staphylococcus aureus aureus Mu3	0
SAUR367830	Staphylococcus aureus aureus USA300	0
SAUR359787 ncbi	Staphylococcus aureus aureus JH1	0
SAUR359786 ncbi	Staphylococcus aureus aureus JH9	0
SAUR282459 ncbi	Staphylococcus aureus aureus MSSA476	0
SAUR282458 ncbi	Staphylococcus aureus aureus MRSA252	0
SAUR273036 ncbi	Staphylococcus aureus RF122	0
SAUR196620 ncbi	Staphylococcus aureus aureus MW2	0
SAUR158879 ncbi	Staphylococcus aureus aureus N315	0
SAUR158878 ncbi	Staphylococcus aureus aureus Mu50	0
SALA317655 ncbi	Sphingopyxis alaskensis RB2256	0
RTYP257363 ncbi	Rickettsia typhi Wilmington	0
RSPH349102 ncbi	Rhodobacter sphaeroides ATCC 17025	1
RSAL288705 ncbi	Renibacterium salmoninarum ATCC 33209	1
RRIC452659 ncbi	Rickettsia rickettsii Iowa	0
RRIC392021 ncbi	Rickettsia rickettsii Sheila Smith	0
RPRO272947 ncbi	Rickettsia prowazekii Madrid E	0
RPOM246200 ncbi	Ruegeria pomeroyi DSS-3	0
RMAS416276 ncbi	Rickettsia massiliae MTU5	0
RFEL315456 ncbi	Rickettsia felis URRWXCal2	0
RCON272944 ncbi	Rickettsia conorii Malish 7	0
RCAN293613 ncbi	Rickettsia canadensis McKiel	0
RBEL391896 ncbi	Rickettsia bellii OSU 85-389	0
RBEL336407 ncbi	Rickettsia bellii RML369-C	0
RAKA293614 ncbi	Rickettsia akari Hartford	0
PSP56811	Psychrobacter sp.	0
PPRO298386 ncbi	Photobacterium profundum SS9	0
PPEN278197 ncbi	Pediococcus pentosaceus ATCC 25745	0
PMAR74546 ncbi	Prochlorococcus marinus MIT 9312	1
PMAR167546 ncbi	Prochlorococcus marinus MIT 9301	1
PMAR167540	Prochlorococcus marinus pastoris MED4ax	1
PMAR167539 ncbi	Prochlorococcus marinus marinus CCMP1375	1
PISL384616 ncbi	Pyrobaculum islandicum DSM 4184	1
PHAL326442 ncbi	Pseudoalteromonas haloplanktis TAC125	0
PFUR186497 ncbi	Pyrococcus furiosus DSM 3638	0
PAST100379	Onion yellows phytoplasma	0
PARS340102 ncbi	Pyrobaculum arsenaticum DSM 13514	1
PAER178306 ncbi	Pyrobaculum aerophilum IM2	0
PACN267747 ncbi	Propionibacterium acnes KPA171202	0
OTSU357244 ncbi	Orientia tsutsugamushi Boryong	0
NSP387092 ncbi	Nitratiruptor sp. SB155-2	1
NSP35761	Nocardioides sp.	1
NSEN222891 ncbi	Neorickettsia sennetsu Miyayama	0
NPHA348780 ncbi	Natronomonas pharaonis DSM 2160	0
MTHE264732 ncbi	Moorella thermoacetica ATCC 39073	1
MSYN262723 ncbi	Mycoplasma synoviae 53	0
MPUL272635 ncbi	Mycoplasma pulmonis UAB CTIP	0
MPNE272634 ncbi	Mycoplasma pneumoniae M129	0
MPEN272633 ncbi	Mycoplasma penetrans HF-2	0
MMYC272632 ncbi	Mycoplasma mycoides mycoides SC str. PG1	0
MMOB267748 ncbi	Mycoplasma mobile 163K	0
MMAR426368 ncbi	Methanococcus maripaludis C7	1
MMAR267377 ncbi	Methanococcus maripaludis S2	0
MLAB410358 ncbi	Methanocorpusculum labreanum Z	1
MKAN190192 ncbi	Methanopyrus kandleri AV19	0
MJAN243232 ncbi	Methanocaldococcus jannaschii DSM 2661	0
MHYO295358 ncbi	Mycoplasma hyopneumoniae 232	0
MHYO262722 ncbi	Mycoplasma hyopneumoniae 7448	0
MHYO262719 ncbi	Mycoplasma hyopneumoniae J	0
MGEN243273 ncbi	Mycoplasma genitalium G37	0
MFLO265311 ncbi	Mesoplasma florum L1	0
MCAP340047 ncbi	Mycoplasma capricolum capricolum ATCC 27343	0
MART243272 ncbi	Mycoplasma arthritidis 158L3-1	0
LWEL386043 ncbi	Listeria welshimeri serovar 6b str. SLCC5334	0
LSPH444177 ncbi	Lysinibacillus sphaericus C3-41	1
LSAK314315 ncbi	Lactobacillus sakei sakei 23K	1
LREU557436 ncbi	Lactobacillus reuteri DSM 20016	1
LMON265669 ncbi	Listeria monocytogenes 4b F2365	0
LINN272626 ncbi	Listeria innocua Clip11262	0
LHEL405566 ncbi	Lactobacillus helveticus DPC 4571	0
LDEL390333 ncbi	Lactobacillus delbrueckii bulgaricus ATCC 11842	1
LBRE387344 ncbi	Lactobacillus brevis ATCC 367	0
LACI272621 ncbi	Lactobacillus acidophilus NCFM	0
IHOS453591 ncbi	Ignicoccus hospitalis KIN4/I	0
HWAL362976 ncbi	Haloquadratum walsbyi DSM 16790	0
HSP64091 ncbi	Halobacterium sp. NRC-1	0
HSAL478009 ncbi	Halobacterium salinarum R1	0
HPYL85963 ncbi	Helicobacter pylori J99	1
HPYL357544 ncbi	Helicobacter pylori HPAG1	1
HPY ncbi	Helicobacter pylori 26695	1
HMOD498761 ncbi	Heliobacterium modesticaldum Ice1	1
HMAR272569 ncbi	Haloarcula marismortui ATCC 43049	1
HHAL349124 ncbi	Halorhodospira halophila SL1	0
HBUT415426 ncbi	Hyperthermus butylicus DSM 5456	0
HACI382638 ncbi	Helicobacter acinonychis Sheeba	1
GTHE420246 ncbi	Geobacillus thermodenitrificans NG80-2	0
GKAU235909 ncbi	Geobacillus kaustophilus HTA426	1
FTUL401614 ncbi	Francisella novicida U112	0
FNOD381764 ncbi	Fervidobacterium nodosum Rt17-B1	0
FMAG334413 ncbi	Finegoldia magna ATCC 29328	1
ERUM302409 ncbi	Ehrlichia ruminantium Gardel	0
ERUM254945 ncbi	Ehrlichia ruminantium Welgevonden	0
ELIT314225 ncbi	Erythrobacter litoralis HTCC2594	1
ECHA205920 ncbi	Ehrlichia chaffeensis Arkansas	0
ECAN269484 ncbi	Ehrlichia canis Jake	0
DSP255470 ncbi	Dehalococcoides sp. CBDB1	0
DSP216389 ncbi	Dehalococcoides sp. BAV1	0
DNOD246195 ncbi	Dichelobacter nodosus VCS1703A	0
DGEO319795 ncbi	Deinococcus geothermalis DSM 11300	1
DETH243164 ncbi	Dehalococcoides ethenogenes 195	0
CVES412965 ncbi	Candidatus Vesicomyosocius okutanii HA	0
CTRA471473 ncbi	Chlamydia trachomatis L2b/UCH-1/proctitis	0
CTRA471472 ncbi	Chlamydia trachomatis 434/Bu	0
CTET212717 ncbi	Clostridium tetani E88	0
CSUL444179 ncbi	Candidatus Sulcia muelleri GWSS	0
CSAL290398 ncbi	Chromohalobacter salexigens DSM 3043	0
CRUT413404 ncbi	Candidatus Ruthia magnifica Cm (Calyptogena magnifica)	1
CPSY167879 ncbi	Colwellia psychrerythraea 34H	1
CPNE182082 ncbi	Chlamydophila pneumoniae TW-183	0
CPNE138677 ncbi	Chlamydophila pneumoniae J138	0
CPNE115713 ncbi	Chlamydophila pneumoniae CWL029	0
CPNE115711 ncbi	Chlamydophila pneumoniae AR39	0
CPER289380 ncbi	Clostridium perfringens SM101	0
CPEL335992 ncbi	Candidatus Pelagibacter ubique HTCC1062	1
CNOV386415 ncbi	Clostridium novyi NT	0
CMUR243161 ncbi	Chlamydia muridarum Nigg	0
CKLU431943 ncbi	Clostridium kluyveri DSM 555	1
CJEJ195099 ncbi	Campylobacter jejuni RM1221	1
CHYD246194 ncbi	Carboxydothermus hydrogenoformans Z-2901	1
CHOM360107 ncbi	Campylobacter hominis ATCC BAA-381	0
CFET360106 ncbi	Campylobacter fetus fetus 82-40	0
CFEL264202 ncbi	Chlamydophila felis Fe/C-56	0
CDIF272563 ncbi	Clostridium difficile 630	0
CCON360104 ncbi	Campylobacter concisus 13826	0
CCAV227941 ncbi	Chlamydophila caviae GPIC	0
CBLO291272 ncbi	Candidatus Blochmannia pennsylvanicus BPEN	0
CBLO203907 ncbi	Candidatus Blochmannia floridanus	0
CABO218497 ncbi	Chlamydophila abortus S26/3	0
BTUR314724 ncbi	Borrelia turicatae 91E135	0
BTRI382640 ncbi	Bartonella tribocorum CIP 105476	0
BSP107806 ncbi	Buchnera aphidicola APS (Acyrthosiphon pisum)	0
BQUI283165 ncbi	Bartonella quintana Toulouse	0
BMEL359391 ncbi	Brucella melitensis biovar Abortus 2308	1
BLIC279010 ncbi	Bacillus licheniformis ATCC 14580	0
BJAP224911 ncbi	Bradyrhizobium japonicum USDA 110	1
BHER314723 ncbi	Borrelia hermsii DAH	0
BHEN283166 ncbi	Bartonella henselae Houston-1	0
BGAR290434 ncbi	Borrelia garinii PBi	0
BCIC186490	Candidatus Baumannia cicadellinicola	0
BBUR224326 ncbi	Borrelia burgdorferi B31	0
BBAC360095 ncbi	Bartonella bacilliformis KC583	0
BAPH372461 ncbi	Buchnera aphidicola Cc (Cinara cedri)	0
BAPH198804 ncbi	Buchnera aphidicola Sg (Schizaphis graminum)	0
BAFZ390236 ncbi	Borrelia afzelii PKo	0
BABO262698 ncbi	Brucella abortus bv. 1 str. 9-941	1
AYEL322098 ncbi	Aster yellows witches-broom phytoplasma AYWB	0
AURANTIMONAS	Aurantimonas manganoxydans SI85-9A1	0
APHA212042 ncbi	Anaplasma phagocytophilum HZ	0
AORE350688 ncbi	Alkaliphilus oremlandii OhILAs	0
AMET293826 ncbi	Alkaliphilus metalliredigens QYMF	1
AMAR234826 ncbi	Anaplasma marginale St. Maries	0
ALAI441768 ncbi	Acholeplasma laidlawii PG-8A	0
AFUL224325 ncbi	Archaeoglobus fulgidus DSM 4304	1
ABAC204669 ncbi	Candidatus Koribacter versatilis Ellin345	1
AAEO224324 ncbi	Aquifex aeolicus VF5	1

Names of the homologs of the genes in the group in each of these orgs

	EG12412	EG12411	EG11979	EG11978	EG11787	EG11454	EG11453
ZMOB264203
WSUC273121
WPIP955
WPIP80849
VVUL216895
VCHO345073					VC0395_A2623
VCHO					VC0243
UURE95667
UURE95664
UPAR505682
TTHE300852					TTHA0591
TTHE262724					TT_C0222
TTEN273068
TSP1755
TPET390874
TPEN368408			TPEN_1712
TPAL243276
TMAR243274
TLET416591
TKOD69014
TFUS269800
TDEN326298					TMDEN_1704
TACI273075
SWOL335541
STHE292459					STH1370
SSP64471					GSYN0157
SSP321332					CYB_1095
SSP321327					CYA_1520
SSAP342451
SPNE488221
SPNE1313
SMAR399550
SLAC55218					SL1157_A0142
SHAE279808
SEPI176280
SEPI176279
SCO			SCO0400
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SALA317655
RTYP257363
RSPH349102			RSPH17025_2178
RSAL288705					RSAL33209_1341
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PSP56811
PPRO298386
PPEN278197
PMAR74546					PMT9312_1316
PMAR167546					P9301ORF_1468
PMAR167540					PMM1208
PMAR167539					PRO_0063
PISL384616					PISL_1490
PHAL326442
PFUR186497
PAST100379
PARS340102			PARS_0353
PAER178306
PACN267747
OTSU357244
NSP387092					NIS_1386
NSP35761					NOCA_4203
NSEN222891
NPHA348780
MTHE264732					MOTH_0751
MSYN262723
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAR426368					MMARC7_0340
MMAR267377
MLAB410358			MLAB_1425
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MGEN243273
MFLO265311
MCAP340047
MART243272
LWEL386043
LSPH444177					BSPH_1160
LSAK314315							LSA1495
LREU557436		LREU_1054
LMON265669
LINN272626
LHEL405566
LDEL390333		LDB1974
LBRE387344
LACI272621
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963					JHP0038
HPYL357544					HPAG1_0041
HPY					HP0044
HMOD498761		HM1_1175
HMAR272569					RRNAC1572
HHAL349124
HBUT415426
HACI382638					HAC_0056
GTHE420246
GKAU235909					GK3128
FTUL401614
FNOD381764
FMAG334413		FMG_0259
ERUM302409
ERUM254945
ELIT314225					ELI_13420
ECHA205920
ECAN269484
DSP255470
DSP216389
DNOD246195
DGEO319795		DGEO_2008
DETH243164
CVES412965
CTRA471473
CTRA471472
CTET212717
CSUL444179
CSAL290398
CRUT413404					RMAG_0903
CPSY167879					CPS_4199
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPER289380
CPEL335992					SAR11_0570
CNOV386415
CMUR243161
CKLU431943					CKL_2474
CJEJ195099					CJE_1611
CHYD246194		CHY_0978
CHOM360107
CFET360106
CFEL264202
CDIF272563
CCON360104
CCAV227941
CBLO291272
CBLO203907
CABO218497
BTUR314724
BTRI382640
BSP107806
BQUI283165
BMEL359391					BAB1_0545
BLIC279010
BJAP224911					BLL5465
BHER314723
BHEN283166
BGAR290434
BCIC186490
BBUR224326
BBAC360095
BAPH372461
BAPH198804
BAFZ390236
BABO262698					BRUAB1_0545
AYEL322098
AURANTIMONAS
APHA212042
AORE350688
AMET293826		AMET_2451
AMAR234826
ALAI441768
AFUL224325							AF_0324
ABAC204669					ACID345_3814
AAEO224324					AQ_1082

Organism features enriched in list (features available for 181 out of the 195 orgs in the list)

Feature	Pvalue	Num occurrences in list	Total num occurrences
Arrangment:Chains	0.0014503	17	92
Arrangment:Clusters	1.079e-6	15	17
Arrangment:Singles	0.0033910	75	286
Disease:Pharyngitis	0.0000774	8	8
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever	2.083e-6	11	11
Disease:bronchitis_and_pneumonitis	0.0000774	8	8
Endospores:No	0.0020208	80	211
GC_Content_Range4:0-40	9.305e-15	108	213
GC_Content_Range4:40-60	0.0011785	54	224
GC_Content_Range4:60-100	9.469e-9	19	145
GC_Content_Range7:0-30	7.718e-9	33	47
GC_Content_Range7:30-40	2.226e-6	75	166
GC_Content_Range7:50-60	0.0000481	17	107
GC_Content_Range7:60-70	8.086e-8	18	134
Genome_Size_Range5:0-2	1.191e-24	100	155
Genome_Size_Range5:4-6	4.072e-20	13	184
Genome_Size_Range5:6-10	0.0000220	3	47
Genome_Size_Range9:0-1	1.078e-11	25	27
Genome_Size_Range9:1-2	1.186e-13	75	128
Genome_Size_Range9:2-3	0.0054979	48	120
Genome_Size_Range9:4-5	2.065e-7	10	96
Genome_Size_Range9:5-6	4.295e-12	3	88
Genome_Size_Range9:6-8	7.787e-6	1	38
Gram_Stain:Gram_Neg	0.0059384	91	333
Habitat:Host-associated	0.0000364	85	206
Habitat:Multiple	2.372e-8	28	178
Motility:Yes	0.0007025	66	267
Optimal_temp.:30-37	3.560e-7	16	18
Oxygen_Req:Aerobic	0.0004646	41	185
Oxygen_Req:Anaerobic	0.0051928	42	102
Shape:Rod	9.284e-8	79	347
Shape:Sphere	0.0000153	15	19
Shape:Spiral	0.0084748	17	34
Temp._range:Hyperthermophilic	0.0000173	17	23
Temp._range:Mesophilic	2.304e-7	124	473

ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 36
Effective number of orgs (counting one per cluster within 468 clusters): 32

Organism list
Homologs in each organism in the list
Features enriched in organism list

Follow (ncbi) link, when present, to find the set of organism features for each organism

Org ID	Org Name	Pvalue	# genes in tgt genome found in org	# genes in group found in org
CMET456442 ncbi	Candidatus Methanoregula boonei 6A8	0.0000160	411	7
MMAR402880 ncbi	Methanococcus maripaludis C5	0.0000178	417	7
MHUN323259 ncbi	Methanospirillum hungatei JF-1	0.0000515	485	7
PMAR93060 ncbi	Prochlorococcus marinus MIT 9215	0.0000754	512	7
PMAR59920 ncbi	Prochlorococcus marinus NATL2A	0.0001083	539	7
PMAR167555 ncbi	Prochlorococcus marinus NATL1A	0.0001248	550	7
PGIN242619 ncbi	Porphyromonas gingivalis W83	0.0002587	610	7
LGAS324831 ncbi	Lactobacillus gasseri ATCC 33323	0.0003393	634	7
LJOH257314 ncbi	Lactobacillus johnsonii NCC 533	0.0003872	646	7
MAEO419665 ncbi	Methanococcus aeolicus Nankai-3	0.0004012	344	6
LINT363253 ncbi	Lawsonia intracellularis PHE/MN1-00	0.0006154	690	7
SSP84588 ncbi	Synechococcus sp. WH 8102	0.0006809	700	7
MTHE187420 ncbi	Methanothermobacter thermautotrophicus Delta H	0.0007626	383	6
FSUC59374 ncbi	Fibrobacter succinogenes succinogenes S85	0.0009145	730	7
LBOR355277 ncbi	Leptospira borgpetersenii serovar Hardjo-bovis JB197	0.0009779	737	7
PRUM264731 ncbi	Prevotella ruminicola 23	0.0010353	743	7
LBOR355276 ncbi	Leptospira borgpetersenii serovar Hardjo-bovis L550	0.0010550	745	7
MMAR444158 ncbi	Methanococcus maripaludis C6	0.0013414	421	6
CCHL340177 ncbi	Chlorobium chlorochromatii CaD3	0.0016654	795	7
LINT267671 ncbi	Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130	0.0019491	813	7
LINT189518 ncbi	Leptospira interrogans serovar Lai str. 56601	0.0021421	824	7
MMAR368407 ncbi	Methanoculleus marisnigri JR1	0.0029662	481	6
SSP387093 ncbi	Sulfurovum sp. NBC37-1	0.0031374	870	7
TSP28240	Thermotoga sp.	0.0031374	870	7
TELO197221 ncbi	Thermosynechococcus elongatus BP-1	0.0032401	874	7
PMAR167542 ncbi	Prochlorococcus marinus MIT 9515	0.0032720	489	6
PLUT319225 ncbi	Chlorobium luteolum DSM 273	0.0035377	885	7
CHUT269798 ncbi	Cytophaga hutchinsonii ATCC 33406	0.0052828	937	7
SELO269084 ncbi	Synechococcus elongatus PCC 6301	0.0054840	942	7
GFOR411154 ncbi	Gramella forsetii KT0803	0.0056078	945	7
BFRA295405 ncbi	Bacteroides fragilis YCH46	0.0078295	991	7
BFRA272559 ncbi	Bacteroides fragilis NCTC 9343	0.0079411	993	7
CPRO264201 ncbi	Candidatus Protochlamydia amoebophila UWE25	0.0083852	573	6
PDIS435591 ncbi	Parabacteroides distasonis ATCC 8503	0.0087005	1006	7
PINT246198	Prevotella intermedia 17	0.0089190	579	6
LPLA220668 ncbi	Lactobacillus plantarum WCFS1	0.0098541	1024	7

Names of the homologs of the genes in the group in each of these orgs

	EG12412	EG12411	EG11979	EG11978	EG11787	EG11454	EG11453
CMET456442	MBOO_1749	MBOO_1750	MBOO_1751	MBOO_1752	MBOO_1762	MBOO_1752	MBOO_1749
MMAR402880	MMARC5_1314	MMARC5_1313	MMARC5_1316	MMARC5_1315	MMARC5_1306	MMARC5_1315	MMARC5_1314
MHUN323259	MHUN_3072	MHUN_3073	MHUN_3074	MHUN_3075	MHUN_2132	MHUN_3075	MHUN_3072
PMAR93060	P9215_14531	P9215_14521	P9215_14511	P9215_14411	P9215_14141	P9215_14411	P9215_14531
PMAR59920	PMN2A_1236	PMN2A_1239	PMN2A_1240	PMN2A_1237	PMN2A_1221	PMN2A_1237	PMN2A_1236
PMAR167555	NATL1_08571	NATL1_08561	NATL1_08551	NATL1_21091	NATL1_20961	NATL1_21091	NATL1_08571
PGIN242619	PG_1560	PG_1561	PG_1562	PG_1563	PG_1288	PG_1563	PG_1560
LGAS324831	LGAS_1136	LGAS_1133	LGAS_1134	LGAS_1135	LGAS_1136	LGAS_1135	LGAS_1136
LJOH257314	LJ_1049	LJ_1052	LJ_1051	LJ_1050	LJ_1049	LJ_1050	LJ_1049
MAEO419665	MAEO_0380	MAEO_0381	MAEO_0383	MAEO_0379	MAEO_0397	MAEO_0379
LINT363253	LI1066	LI1065	LIC004	LI0577	LIC082	LI0577	LI1066
SSP84588	SYNW0646OR1992	SYNW0647OR1991	SYNW0648OR1990	SYNW0649OR1989	SYNW0422OR1394	SYNW0649OR1989	SYNW0646OR1992
MTHE187420		MTH1792	MTH1790	MTH1791	MTH333	MTH1791	MTH1789
FSUC59374	FSU1219	FSU2869	FSU1218	FSU1220	FSU2786	FSU1220	FSU1219
LBOR355277	LBJ_1183	LBJ_1182	LBJ_1181	LBJ_1184	LBJ_0410	LBJ_1184	LBJ_1183
PRUM264731	GFRORF0173	GFRORF0238	GFRORF0085	GFRORF0229	GFRORF1377	GFRORF0229	GFRORF0173
LBOR355276	LBL_1237	LBL_1236	LBL_1235	LBL_1238	LBL_2667	LBL_1238	LBL_1237
MMAR444158	MMARC6_0590	MMARC6_0589	MMARC6_0592	MMARC6_0591		MMARC6_0591	MMARC6_0590
CCHL340177	CAG_0516	CAG_0515	CAG_0514	CAG_0512	CAG_0652	CAG_0512	CAG_0516
LINT267671	LIC_12124	LIC_12125	LIC_12126	LIC_12123	LIC_13168	LIC_12123	LIC_12124
LINT189518	LA1661	LA1660	LA1659	LA1662	LA3963	LA1662	LA1661
MMAR368407	MEMAR_0186	MEMAR_0187		MEMAR_0188	MEMAR_0204	MEMAR_0188	MEMAR_0186
SSP387093	SUN_1552	SUN_1715	SUN_1716	SUN_1554	SUN_0342	SUN_1554	SUN_1552
TSP28240	TRQ2_0305	TRQ2_0306	TRQ2_0304	TRQ2_0303	TRQ2_0305	TRQ2_0303	TRQ2_0305
TELO197221	TLL0458	TLR0951	TLL0456	TLL0457	TLL0634	TLL0457	TLL0458
PMAR167542	P9515ORF_0158		P9515ORF_1474	P9515ORF_1473	P9515ORF_1431	P9515ORF_1473	P9515ORF_0158
PLUT319225	PLUT_0419	PLUT_0418	PLUT_0417	PLUT_0416	PLUT_1863	PLUT_0416	PLUT_0419
CHUT269798	CHU_3391	CHU_0494	CHU_3843	CHU_3390	CHU_0059	CHU_3390	CHU_3391
SELO269084	SYC1993_C	SYC1994_C	SYC1995_C	SYC1992_C	SYC0211_C	SYC1992_C	SYC1993_C
GFOR411154	GFO_2037	GFO_3286	GFO_3287	GFO_2036	GFO_0553	GFO_2036	GFO_2037
BFRA295405	BF0807	BF1310	BF2296	BF1094	BF1823	BF2583	BF0807
BFRA272559	BF3504	BF1296	BF2385	BF3453	BF1888	BF1011	BF3504
CPRO264201	PC0126	PC0125	PC0124	PC0123		PC0123	PC0126
PDIS435591	BDI_3616	BDI_2511	BDI_1833	BDI_0650	BDI_0652	BDI_0650	BDI_3616
PINT246198		PIN_A1819	PIN_A1898	PIN_A1970	PIN_A1552	PIN_A1970	PIN_A1891
LPLA220668	LP_1189	LP_1190	LP_1188	LP_1186	LP_2105	LP_1186	LP_1189

Organism features enriched in list (features available for 34 out of the 36 orgs in the list)

Feature	Pvalue	Num occurrences in list	Total num occurrences
Disease:Leptospirosis	9.734e-6	4	4
Disease:Severe_infection	0.0033068	2	2
Disease:and_abcesses	0.0033068	2	2
Disease:diarrhea	0.0093739	2	3
GC_Content_Range4:60-100	0.0005223	1	145
GC_Content_Range7:60-70	0.0011288	1	134
Habitat:Aquatic	0.0065248	11	91
Habitat:Multiple	0.0061956	4	178
Oxygen_Req:Anaerobic	0.0001335	15	102
Oxygen_Req:Facultative	0.0054752	5	201
Pathogenic_in:Human	0.0028041	5	213
Pathogenic_in:No	0.0010352	22	226

ORGANISMS DEPLETED FOR GROUP:

Back to top

PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group

Pathway or complex	# Orgs containing it	# of those orgs also containing candidate	Pearson Coeff
DTDPRHAMSYN-PWY (dTDP-L-rhamnose biosynthesis I)	426	243	0.5333
*OANTIGEN-PWY (O-antigen building blocks biosynthesis (E. coli))*	416	236	0.5051
PWY-4041 (γ-glutamyl cycle)	279	174	0.4248
GLUTATHIONESYN-PWY (glutathione biosynthesis)	339	195	0.4070
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)	195	134	0.4061
PWY-1269 (CMP-KDO biosynthesis I)	325	189	0.4025

PAIRWISE GENOME CONTEXT SCORE MATRIX:

	EG12411	EG11979	EG11978	EG11787	EG11454	EG11453
EG12412	0.999944	0.999922	0.999965	0.998828	0.999959	0.999995
EG12411		0.99995	0.999915	0.998657	0.999909	0.999934
EG11979			0.999948	0.998791	0.99994	0.99992
EG11978				0.998815	0.999998	0.999959
EG11787					0.998642	0.998754
EG11454						0.999958
EG11453

PAIRWISE BLAST SCORES:

	EG12412	EG12411	EG11979	EG11978	EG11787	EG11454	EG11453
EG12412	0.0f0	-	-	-	-	-	2.0e-130
EG12411	-	0.0f0	-	-	-	-	-
EG11979	-	-	0.0f0	-	-	-	-
EG11978	-	-	-	0.0f0	-	4.1e-100	-
EG11787	-	-	-	-	0.0f0	-	-
EG11454	-	-	-	4.1e-100	-	0.0f0	-
EG11453	1.3e-130	-	-	-	-	-	0.0f0

PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- DTDPRHAMSYNTHMULTI-CPLX (dTDP-L-rhamnose synthetase) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.286, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9987 EG12411 (rfbD) DTDPDEHYRHAMREDUCT-MONOMER (dTDP-4-dehydrorhamnose reductase)
   *in cand* 0.9998 0.9988 EG11979 (rfbC) DTDPDEHYDRHAMEPIM-MONOMER (dTDP-4-dehydrorhamnose 3,5-epimerase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9988 EG11453 (rffG) DTDPGLUCDEHYDRAT2-MONOMER (dTDP-glucose 4,6-dehydratase 2)
   *in cand* 0.9998 0.9986 EG11454 (rffH) DTDPGLUCOSEPP2-MONOMER (dTDP-glucose pyrophosphorylase 2)
   *in cand* 0.9989 0.9986 EG11787 (gmd) GDPMANDEHYDRA-MONOMER (GDP-mannose 4,6-dehydratase)
   *in cand* 0.9998 0.9988 EG11978 (rfbA) DTDPGLUCOSEPP-MONOMER (dTDP-glucose pyrophosphorylase)
   *in cand* 0.9998 0.9988 EG12412 (rfbB) DTDPGLUCDEHYDRAT-MONOMER (RmlB)

- OANTIGEN-PWY (O-antigen building blocks biosynthesis (E. coli)) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.571, average score: 0.863)
  Genes in pathway or complex:
             0.9686 0.9187 EG11981 (glf) GALPMUT-MONOMER (UDP-galactopyranose mutase)
   *in cand* 0.9998 0.9988 EG11978 (rfbA) DTDPGLUCOSEPP-MONOMER (dTDP-glucose pyrophosphorylase)
   *in cand* 0.9998 0.9988 EG12412 (rfbB) DTDPGLUCDEHYDRAT-MONOMER (RmlB)
   *in cand* 0.9998 0.9987 EG12411 (rfbD) DTDPDEHYRHAMREDUCT-MONOMER (dTDP-4-dehydrorhamnose reductase)
   *in cand* 0.9998 0.9988 EG11979 (rfbC) DTDPDEHYDRHAMEPIM-MONOMER (dTDP-4-dehydrorhamnose 3,5-epimerase)
             0.8233 0.4998 EG11553 (glmM) PHOSGLUCOSAMINEMUT-MONOMER (phosphoglucosamine mutase)
             0.9452 0.9102 EG10382 (glmS) L-GLN-FRUCT-6-P-AMINOTRANS-MONOMER (GlmS)
             0.7695 0.3652 EG11198 (glmU) NAG1P-URIDYLTRANS-MONOMER (GlmU)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9988 EG11453 (rffG) DTDPGLUCDEHYDRAT2-MONOMER (dTDP-glucose 4,6-dehydratase 2)
   *in cand* 0.9998 0.9986 EG11454 (rffH) DTDPGLUCOSEPP2-MONOMER (dTDP-glucose pyrophosphorylase 2)
   *in cand* 0.9989 0.9986 EG11787 (gmd) GDPMANDEHYDRA-MONOMER (GDP-mannose 4,6-dehydratase)

- DTDPRHAMSYN-PWY (dTDP-L-rhamnose biosynthesis I) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.571, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9988 EG11979 (rfbC) DTDPDEHYDRHAMEPIM-MONOMER (dTDP-4-dehydrorhamnose 3,5-epimerase)
   *in cand* 0.9998 0.9987 EG12411 (rfbD) DTDPDEHYRHAMREDUCT-MONOMER (dTDP-4-dehydrorhamnose reductase)
   *in cand* 0.9998 0.9988 EG12412 (rfbB) DTDPGLUCDEHYDRAT-MONOMER (RmlB)
   *in cand* 0.9998 0.9988 EG11978 (rfbA) DTDPGLUCOSEPP-MONOMER (dTDP-glucose pyrophosphorylase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9988 EG11453 (rffG) DTDPGLUCDEHYDRAT2-MONOMER (dTDP-glucose 4,6-dehydratase 2)
   *in cand* 0.9998 0.9986 EG11454 (rffH) DTDPGLUCOSEPP2-MONOMER (dTDP-glucose pyrophosphorylase 2)
   *in cand* 0.9989 0.9986 EG11787 (gmd) GDPMANDEHYDRA-MONOMER (GDP-mannose 4,6-dehydratase)

- ECASYN-PWY (enterobacterial common antigen biosynthesis) (degree of match pw to cand: 0.222, degree of match cand to pw: 0.286, average score: 0.998)
  Genes in pathway or complex:
             0.9956 0.9863 EG10840 (rfe) GLCNACPTRANS-MONOMER (undecaprenyl-phosphate α-N-acetylglucosaminyl transferase)
             0.9420 0.7903 EG11458 (rffM) UDPMANACATRANS-MONOMER (UDP-N-acetyl-D-mannosaminuronic acid transferase)
             0.9954 0.9899 EG11452 (rffD) UDPMANNACADEHYDROG-MONOMER (UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase)
             0.6572 0.0808 G7800 (rffT) G7800-MONOMER (4-acetamido-4,6-dideoxy-D-galactose transferase)
             0.8577 0.6408 EG11455 (rffC) TDPFUCACTRANS-MONOMER (dTDP-fucosamine acetyltransferase)
             0.9860 0.9332 EG11451 (rffE) UDPGLCNACEPIM-MONOMER (UDP-N-acetylglucosamine-2-epimerase)
             0.9968 0.9920 EG11456 (rffA) RFFTRANS-MONOMER (dTDP-4-oxo-6-deoxy-D-glucose transaminase)
   *in cand* 0.9998 0.9986 EG11454 (rffH) DTDPGLUCOSEPP2-MONOMER (dTDP-glucose pyrophosphorylase 2)
   *in cand* 0.9998 0.9988 EG11453 (rffG) DTDPGLUCDEHYDRAT2-MONOMER (dTDP-glucose 4,6-dehydratase 2)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9989 0.9986 EG11787 (gmd) GDPMANDEHYDRA-MONOMER (GDP-mannose 4,6-dehydratase)
   *in cand* 0.9998 0.9988 EG11978 (rfbA) DTDPGLUCOSEPP-MONOMER (dTDP-glucose pyrophosphorylase)
   *in cand* 0.9998 0.9988 EG11979 (rfbC) DTDPDEHYDRHAMEPIM-MONOMER (dTDP-4-dehydrorhamnose 3,5-epimerase)
   *in cand* 0.9998 0.9987 EG12411 (rfbD) DTDPDEHYRHAMREDUCT-MONOMER (dTDP-4-dehydrorhamnose reductase)
   *in cand* 0.9998 0.9988 EG12412 (rfbB) DTDPGLUCDEHYDRAT-MONOMER (RmlB)

Back to top

GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11978 EG11979 EG12411 EG12412 (centered at EG12411)
EG11453 EG11454 (centered at EG11454)
EG11787 (centered at EG11787)

ORG:REPLICON:CIRC?\GENE	IN REF LIST	EG12412	EG12411	EG11979	EG11978	EG11787	EG11454	EG11453
		356/623	350/623	338/623	351/623	297/623	353/623	356/623
AAEO224324:0:T	yes	-	-	-	-	0	-	-
AAUR290340:2:T	yes	-	970	-	968	1913	968	0
AAVE397945:0:T	yes	3	2	0	1	-	1	3
ABAC204669:0:T	yes	-	-	-	-	0	-	-
ABAU360910:0:T	yes	1120	0	1	1121	-	1121	1120
ABOR393595:0:T	yes	0	1	4	3	-	3	0
ABUT367737:0:T	yes	1119	-	0	1120	-	1120	1119
ACAU438753:0:T	yes	1803	1802	1804	1801	0	1801	1803
ACEL351607:0:T	yes	-	0	151	-	33	-	-
ACRY349163:8:T	yes	704	707	706	705	0	705	704
ADEH290397:0:T	yes	-	4	2	3	0	3	1
AEHR187272:0:T	yes	0	1	3	2	-	2	0
AFER243159:0:T	yes	2425	2424	2865	2864	0	2864	2425
AFUL224325:0:T	yes	-	-	-	-	-	-	0
AHYD196024:0:T	yes	6	5	3	4	0	4	6
AMAR329726:9:T	yes	2	391	0	1	5291	1	2
AMET293826:0:T	yes	-	0	-	-	-	-	-
ANAE240017:0:T	yes	18	2	-	0	-	0	-
APER272557:0:T	yes	-	1	0	-	-	-	-
APLE416269:0:T	yes	0	-	-	-	-	-	0
APLE434271:0:T	no	0	-	-	-	-	-	0
ASAL382245:5:T	yes	0	1	3	2	-	2	0
ASP1667:3:T	yes	-	0	-	10	-	10	1
ASP232721:2:T	yes	0	1	3	2	-	2	0
ASP62928:0:T	yes	3	2	0	1	1732	1	3
ASP62977:0:T	yes	0	1	3	2	-	2	0
ASP76114:2:T	yes	0	423	424	425	-	425	0
AVAR240292:3:T	yes	541	1258	1257	-	0	-	541
BABO262698:1:T	no	-	-	-	-	0	-	-
BAMB339670:2:T	no	-	-	-	-	0	-	-
BAMB339670:3:T	no	0	3	2	1	-	1	0
BAMB398577:2:T	no	-	-	-	-	0	-	-
BAMB398577:3:T	no	0	3	2	1	-	1	0
BAMY326423:0:T	yes	1	0	-	-	-	-	-
BANT260799:0:T	no	1	2	0	-	-	-	1
BANT261594:2:T	no	1	2	0	-	-	-	1
BANT568206:2:T	yes	1	0	2	-	-	-	1
BANT592021:2:T	no	2	3	1	0	-	-	2
BBAC264462:0:T	yes	-	-	-	177	0	177	-
BBRO257310:0:T	yes	2	1	0	-	2	-	2
BCAN483179:0:T	no	-	-	0	-	-	-	-
BCAN483179:1:T	no	-	-	-	-	0	-	-
BCEN331271:2:T	no	0	3	2	1	11	1	0
BCEN331272:1:T	yes	-	-	-	-	-	0	-
BCEN331272:3:T	yes	0	3	2	1	9	-	0
BCER226900:1:T	yes	-	3	1	0	-	0	2
BCER288681:0:T	no	1	2	0	-	-	-	1
BCER315749:1:T	yes	1	2	0	-	-	-	1
BCER405917:1:T	yes	2	3	1	-	-	0	2
BCER572264:1:T	no	1	2	0	-	-	-	1
BCLA66692:0:T	yes	-	0	2	3	-	3	1
BFRA272559:1:T	yes	2449	262	1325	2401	832	0	2449
BFRA295405:0:T	no	0	506	1500	288	1022	1802	0
BHAL272558:0:T	yes	0	1	-	-	285	-	-
BJAP224911:0:F	yes	-	-	-	-	0	-	-
BLON206672:0:T	yes	-	1	-	0	2	0	2
BMAL243160:0:T	no	-	-	-	-	0	-	-
BMAL243160:1:T	no	3	0	1	2	-	2	3
BMAL320388:0:T	no	-	-	-	-	0	-	-
BMAL320388:1:T	no	0	3	2	1	-	1	0
BMAL320389:0:T	yes	-	-	-	-	0	-	-
BMAL320389:1:T	yes	3	0	1	2	-	2	3
BMEL224914:0:T	no	-	-	0	-	-	-	-
BMEL224914:1:T	no	-	-	-	-	0	-	-
BMEL359391:1:T	no	-	-	-	-	0	-	-
BOVI236:0:T	yes	-	-	14	-	0	-	-
BPAR257311:0:T	no	2	1	0	-	2	-	2
BPER257313:0:T	yes	2	1	0	-	2	-	2
BPET94624:0:T	yes	0	1	2	-	-	-	0
BPSE272560:0:T	yes	-	-	-	-	0	-	-
BPSE272560:1:T	yes	3	0	1	2	-	2	3
BPSE320372:0:T	no	-	-	-	-	0	-	-
BPSE320372:1:T	no	3	0	1	2	-	2	3
BPSE320373:0:T	no	-	-	-	-	0	-	-
BPSE320373:1:T	no	4	0	1	3	-	3	4
BPUM315750:0:T	yes	2563	2762	-	2564	0	2564	2563
BSP36773:1:T	yes	-	-	-	-	0	-	-
BSP36773:2:T	yes	0	3	2	1	-	1	0
BSP376:0:T	yes	1686	1683	1684	1685	0	1685	1686
BSUB:0:T	yes	1	0	-	-	-	2	-
BSUI204722:0:T	yes	-	-	0	-	-	-	-
BSUI204722:1:T	yes	-	-	-	-	0	-	-
BSUI470137:0:T	no	-	-	0	-	-	-	-
BSUI470137:1:T	no	-	-	-	-	0	-	-
BTHA271848:1:T	no	137	140	139	138	0	138	137
BTHE226186:0:T	yes	3	1298	374	0	779	0	3
BTHU281309:1:T	no	1	2	0	-	-	-	1
BTHU412694:1:T	no	1	2	0	-	-	-	1
BVIE269482:5:T	yes	-	-	-	-	0	-	-
BVIE269482:7:T	yes	4	2	0	1	-	1	4
BWEI315730:4:T	yes	-	2	0	-	-	-	1
BXEN266265:0:T	yes	-	-	7	-	0	-	-
BXEN266265:1:T	yes	1	-	-	0	-	0	1
CACE272562:1:T	yes	150	133	149	151	0	151	150
CAULO:0:T	yes	2664	2649	2668	134	0	134	2664
CBEI290402:0:T	yes	2105	2103	0	2107	-	2107	2105
CBOT36826:1:T	no	0	-	667	-	-	-	0
CBOT441770:0:T	yes	0	-	646	-	-	-	0
CBOT441771:0:T	no	0	-	568	-	-	-	0
CBOT441772:1:T	no	0	-	-	-	628	-	0
CBOT498213:1:T	no	1	2	0	3	5	3	1
CBOT508765:1:T	yes	1702	1700	1703	1704	0	1704	1702
CBOT515621:2:T	yes	0	-	-	-	-	-	0
CBOT536232:0:T	no	1	-	-	0	-	0	1
CBUR227377:1:T	yes	-	-	1101	1097	0	1097	-
CBUR360115:1:T	no	-	-	1160	1155	0	1155	-
CBUR434922:2:T	no	-	-	5	0	613	0	-
CCHL340177:0:T	yes	4	3	2	0	142	0	4
CCUR360105:0:T	yes	0	-	-	1	-	1	0
CDES477974:0:T	yes	-	1	3	-	-	-	0
CDIP257309:0:T	yes	-	1	-	0	-	0	-
CEFF196164:0:F	yes	-	1	-	0	-	0	2
CGLU196627:0:T	yes	2	1	-	0	-	0	2
CHUT269798:0:T	yes	3277	430	3725	3276	0	3276	3277
CHYD246194:0:T	yes	-	0	-	-	-	-	-
CJAP155077:0:T	yes	0	2	3	1	-	1	0
CJEI306537:0:T	yes	-	0	246	245	-	245	-
CJEJ192222:0:T	yes	-	-	108	-	0	-	-
CJEJ195099:0:T	no	-	-	-	-	0	-	-
CJEJ354242:2:T	yes	-	-	4	-	0	-	-
CJEJ360109:0:T	yes	-	-	0	-	986	-	-
CJEJ407148:0:T	no	1	-	-	0	-	0	-
CKLU431943:1:T	yes	-	-	-	-	0	-	-
CKOR374847:0:T	yes	0	1	2	-	-	-	-
CMAQ397948:0:T	yes	-	0	46	-	-	-	-
CMET456442:0:T	yes	0	1	2	3	12	3	0
CMIC31964:2:T	yes	-	0	3	4	926	4	-
CMIC443906:2:T	yes	-	0	3	4	608	4	-
CPEL335992:0:T	yes	-	-	-	-	0	-	-
CPER195102:1:T	yes	3	2	1	0	-	0	3
CPER195103:0:T	no	0	115	114	113	-	113	116
CPHY357809:0:T	yes	2	1	0	3	-	3	2
CPRO264201:0:F	yes	3	2	1	0	-	0	3
CPSY167879:0:T	yes	-	-	-	-	0	-	-
CRUT413404:0:T	yes	-	-	-	-	0	-	-
CSP501479:1:F	yes	37	38	36	39	0	39	37
CSP78:2:T	yes	2	1	32	0	-	0	2
CTEP194439:0:T	yes	3	2	1	0	-	0	3
CVIO243365:0:T	yes	0	1	3	2	-	2	0
DARO159087:0:T	yes	0	506	2	1	0	1	0
DDES207559:0:T	yes	1780	1781	2536	2300	0	2300	1780
DGEO319795:1:T	yes	-	0	-	-	-	-	-
DHAF138119:0:T	yes	0	-	-	1	1126	1	0
DOLE96561:0:T	yes	0	1526	2	1	268	1	0
DPSY177439:2:T	yes	20	2256	2257	19	0	19	20
DRAD243230:2:T	yes	-	2	-	0	-	0	-
DRAD243230:3:T	yes	-	-	-	-	0	-	-
DRED349161:0:T	yes	0	1	2	3	100	3	0
DSHI398580:1:T	yes	1	3	0	4	19	4	1
DVUL882:1:T	yes	911	910	248	474	0	474	911
ECAR218491:0:T	yes	2807	0	1	2	-	2	2807
ECOL199310:0:T	no	2100	-	-	2101	0	2101	2100
ECOL316407:0:T	no	1437	2	0	1	15	1436	1437
ECOL331111:6:T	no	3	2	0	1	17	1894	1893
ECOL362663:0:T	no	1880	-	-	1881	0	1881	1880
ECOL364106:1:T	no	3	2	0	1	18	2023	2022
ECOL405955:2:T	yes	3	2	0	1	15	1846	3
ECOL409438:6:T	yes	1782	-	-	1783	0	1783	1782
ECOL413997:0:T	no	1742	2	0	1	15	1743	1742
ECOL439855:4:T	no	3046	-	-	3047	0	3047	3046
ECOL469008:0:T	no	12	13	15	14	0	2638	12
ECOL481805:0:T	no	13	14	16	15	0	2642	2643
ECOL585034:0:T	no	1811	-	-	1812	0	1812	1811
ECOL585035:0:T	no	8	-	7	0	20	2023	2022
ECOL585055:0:T	no	1915	-	-	1916	0	1916	1915
ECOL585056:2:T	no	1917	-	-	1918	0	1918	1917
ECOL585057:0:T	no	2025	13	15	14	0	2024	2025
ECOL585397:0:T	no	2033	-	-	2034	0	2034	2033
ECOL83334:0:T	no	1909	-	-	1910	0	1910	1909
ECOLI:0:T	no	3	2	0	1	15	1779	1778
ECOO157:0:T	no	1913	-	-	1914	0	1914	1913
EFAE226185:3:T	yes	1	0	2	3	-	3	-
EFER585054:1:T	yes	1585	-	-	1584	0	1584	1585
ELIT314225:0:T	yes	-	-	-	-	0	-	-
ESP42895:1:T	yes	2	-	0	1	15	1	2
FALN326424:0:T	yes	-	0	4646	-	803	-	-
FJOH376686:0:T	yes	24	2	3	1	0	1	24
FMAG334413:1:T	yes	-	0	-	-	-	-	-
FNUC190304:0:T	yes	0	31	-	-	-	-	0
FPHI484022:1:T	yes	6	5	4	3	0	3	6
FRANT:0:T	no	0	-	-	1	-	1	0
FSP106370:0:T	yes	-	0	3028	-	592	-	-
FSP1855:0:T	yes	-	4839	0	-	4446	-	-
FSUC59374:0:T	yes	1	1601	0	2	1520	2	1
FTUL351581:0:T	no	1	-	-	0	-	0	1
FTUL393011:0:T	no	-	-	-	0	-	0	-
FTUL393115:0:T	yes	0	-	-	1	-	1	0
FTUL418136:0:T	no	2	-	-	0	-	0	2
FTUL458234:0:T	no	1	-	-	0	-	0	1
GBET391165:0:T	yes	0	3	2	1	2252	1	0
GFOR411154:0:T	yes	1484	2733	2734	1483	0	1483	1484
GKAU235909:1:T	yes	-	-	-	-	0	-	-
GMET269799:1:T	yes	1558	1557	-	0	385	0	1558
GOXY290633:5:T	yes	3	0	1	-	553	-	3
GSUL243231:0:T	yes	1732	1731	-	1449	0	1449	1732
GURA351605:0:T	yes	403	402	-	0	337	0	403
GVIO251221:0:T	yes	0	2802	3278	1334	300	1334	2803
HACI382638:1:T	yes	-	-	-	-	0	-	-
HARS204773:0:T	yes	0	3	2	1	-	1	0
HAUR316274:2:T	yes	990	2348	0	-	4338	-	-
HCHE349521:0:T	yes	0	3	2	1	2332	1	0
HDUC233412:0:T	yes	0	-	-	1	-	1	0
HHEP235279:0:T	yes	0	-	-	1	74	1	0
HINF281310:0:T	yes	0	-	-	-	-	-	0
HINF374930:0:T	yes	0	-	-	-	-	-	0
HINF71421:0:T	no	0	-	-	-	-	-	0
HMAR272569:8:T	yes	-	-	-	-	0	-	-
HMOD498761:0:T	yes	-	0	-	-	-	-	-
HMUK485914:1:T	yes	1	0	-	-	213	-	-
HNEP81032:0:T	yes	11	1	0	10	14	10	11
HPY:0:T	no	-	-	-	-	0	-	-
HPYL357544:1:T	yes	-	-	-	-	0	-	-
HPYL85963:0:T	no	-	-	-	-	0	-	-
HSOM205914:1:T	yes	0	-	-	-	0	-	0
HSOM228400:0:T	no	0	-	-	-	0	-	0
ILOI283942:0:T	yes	0	-	-	1	-	1	0
JSP290400:0:T	yes	-	-	-	-	0	-	-
JSP290400:1:T	yes	2	1	3	0	-	0	2
JSP375286:0:T	yes	3	0	1	2	-	2	3
KPNE272620:2:T	yes	0	-	-	1	0	1	0
KRAD266940:2:F	yes	-	-	1269	-	0	-	-
LBIF355278:2:T	yes	1808	-	-	1809	0	1809	1808
LBIF456481:2:T	no	1861	-	-	1862	0	1862	1861
LBOR355276:1:T	yes	2	1	0	3	1299	3	2
LBOR355277:1:T	no	673	672	671	674	0	674	673
LCAS321967:1:T	yes	1	0	2	3	-	3	-
LCHO395495:0:T	yes	0	1	3	2	1749	2	0
LDEL321956:0:T	yes	2	0	1	-	-	-	2
LDEL390333:0:T	yes	-	0	-	-	-	-	-
LGAS324831:0:T	yes	3	0	1	2	3	2	3
LINT189518:1:T	yes	2	1	0	3	2327	3	2
LINT267671:1:T	no	1	2	3	0	1031	0	1
LINT363253:2:T	yes	-	-	0	-	78	-	-
LINT363253:3:T	yes	489	488	-	0	-	0	489
LJOH257314:0:T	yes	0	3	2	1	0	1	0
LLAC272622:5:T	yes	4	5	2	0	-	0	-
LLAC272623:0:T	yes	4	5	2	0	-	0	-
LMES203120:1:T	yes	1	0	2	3	-	3	1
LMON169963:0:T	no	-	3	1	0	-	0	2
LPLA220668:0:T	yes	3	4	2	0	789	0	3
LPNE272624:0:T	no	2	1	0	4	2	4	2
LPNE297245:1:F	no	2	1	0	4	-	4	2
LPNE297246:1:F	yes	2	1	0	4	2	4	2
LPNE400673:0:T	no	2	3	4	0	2	0	2
LREU557436:0:T	yes	-	0	-	-	-	-	-
LSAK314315:0:T	yes	-	-	-	-	-	-	0
LSPH444177:1:T	yes	-	-	-	-	0	-	-
LXYL281090:0:T	yes	-	0	2	3	-	3	-
MABS561007:1:T	yes	-	3121	3288	3623	0	3623	3287
MACE188937:0:T	yes	2533	2532	2534	988	0	988	-
MAEO419665:0:T	yes	1	2	4	0	17	0	-
MAER449447:0:T	yes	5785	1	0	-	2990	-	5785
MAQU351348:2:T	yes	3	2	0	1	-	1	3
MAVI243243:0:T	yes	-	3660	3834	4243	0	4243	3833
MBAR269797:1:T	yes	198	199	197	200	0	200	-
MBOV233413:0:T	no	-	2988	3187	0	3350	0	3186
MBOV410289:0:T	no	-	2947	3177	0	3339	0	3176
MBUR259564:0:T	yes	2	1	3	0	-	0	-
MCAP243233:0:T	yes	127	130	129	128	0	128	127
MEXT419610:0:T	yes	1292	1293	0	3	1163	3	1292
MFLA265072:0:T	yes	736	739	738	737	0	737	736
MGIL350054:3:T	yes	-	3031	-	0	4493	3029	-
MHUN323259:0:T	yes	945	946	947	948	0	948	945
MLAB410358:0:T	yes	-	-	0	-	-	-	-
MLEP272631:0:T	yes	-	0	776	1078	-	1078	-
MLOT266835:2:T	yes	1405	1406	1404	1403	0	1403	1405
MMAG342108:0:T	yes	9	1424	0	10	1028	10	9
MMAR368407:0:T	yes	0	1	-	2	18	2	0
MMAR394221:0:T	yes	1	0	2	3	1	3	1
MMAR402880:1:T	yes	8	7	10	9	0	9	8
MMAR426368:0:T	yes	-	-	-	-	0	-	-
MMAR444158:0:T	yes	1	0	3	2	-	2	1
MMAZ192952:0:T	yes	521	522	520	1596	0	1596	-
MPET420662:1:T	yes	3	2	0	1	2100	1	3
MSED399549:0:T	yes	-	0	590	-	-	-	-
MSME246196:0:T	yes	-	1432	5542	0	-	0	1120
MSP164756:1:T	no	-	879	627	0	508	0	628
MSP164757:0:T	no	-	926	668	0	-	0	669
MSP189918:2:T	yes	-	890	637	0	519	0	638
MSP266779:3:T	yes	2	3	1	0	-	0	2
MSP400668:0:T	yes	0	3	2	1	-	1	0
MSP409:2:T	yes	619	620	618	621	0	621	619
MSTA339860:0:T	yes	566	568	0	-	445	-	-
MSUC221988:0:T	yes	0	-	-	-	0	-	0
MTBCDC:0:T	no	-	3173	3377	0	1275	0	3376
MTBRV:0:T	no	-	2965	3163	0	1192	0	3162
MTHE187420:0:T	yes	-	1458	1456	1457	0	1457	1455
MTHE264732:0:T	yes	-	-	-	-	0	-	-
MTHE349307:0:T	yes	3	0	2	-	106	-	3
MTUB336982:0:T	no	-	2938	3145	0	1206	0	3144
MTUB419947:0:T	yes	-	3068	3269	0	1225	0	3268
MVAN350058:0:T	yes	-	1493	0	381	-	381	-
MXAN246197:0:T	yes	-	2	0	1	692	1	3
NARO279238:0:T	yes	0	1	2	3	-	3	0
NEUR228410:0:T	yes	0	558	210	209	-	209	0
NEUT335283:2:T	yes	2212	2213	2058	1706	0	1706	2212
NFAR247156:2:T	yes	-	4492	0	1	-	1	-
NGON242231:0:T	yes	1435	0	-	1436	-	1436	1435
NHAM323097:2:T	yes	0	3	2	1926	1679	1926	0
NMEN122586:0:T	no	0	655	2	1	-	1	0
NMEN122587:0:T	yes	0	719	2	1	-	1	0
NMEN272831:0:T	no	0	592	2	1	-	1	0
NMEN374833:0:T	no	17	638	0	18	-	18	17
NMUL323848:3:T	yes	0	1	3	2	-	2	0
NOCE323261:1:T	yes	0	3	2	1	732	1	0
NSP103690:6:T	yes	0	4495	4494	-	4838	-	0
NSP35761:1:T	yes	-	-	-	-	0	-	-
NSP387092:0:T	yes	-	-	-	-	0	-	-
NWIN323098:0:T	yes	0	3	2	1	1858	1	0
OANT439375:4:T	yes	-	-	-	-	0	-	-
OANT439375:5:T	yes	1	0	2	3	-	3	1
OCAR504832:0:T	yes	3	2	0	1	-	1	3
OIHE221109:0:T	yes	1302	0	-	1303	-	1303	1302
PABY272844:0:T	yes	0	5	3	-	-	-	0
PAER208963:0:T	yes	0	1	3	2	303	2	0
PAER208964:0:T	no	0	1	3	2	297	2	0
PARC259536:0:T	yes	0	1	3	2	-	2	0
PARS340102:0:T	yes	-	-	0	-	-	-	-
PATL342610:0:T	yes	3	0	1	2	-	2	3
PCAR338963:0:T	yes	0	1	3	2	-	2	0
PCRY335284:1:T	yes	0	3	2	1	-	1	0
PDIS435591:0:T	yes	2950	1847	1171	0	2	0	2950
PENT384676:0:T	yes	3	0	1	2	-	4231	3
PFLU205922:0:T	yes	3808	3807	0	3806	5460	3806	3808
PFLU216595:1:T	yes	3	0	1	2	3257	2	3
PFLU220664:0:T	yes	3	0	1	2	5100	2	3
PGIN242619:0:T	yes	234	235	236	237	0	237	234
PHOR70601:0:T	yes	-	3	2	-	0	-	0
PING357804:0:T	yes	2531	2529	2528	2530	0	2530	2531
PINT246198:1:T	yes	-	267	346	418	0	418	339
PISL384616:0:T	yes	-	-	-	-	0	-	-
PLUM243265:0:F	yes	1	-	-	0	-	0	1
PLUT319225:0:T	yes	3	2	1	0	1407	0	3
PMAR146891:0:T	yes	-	-	7	-	0	-	-
PMAR167539:0:T	yes	-	-	-	-	0	-	-
PMAR167540:0:T	yes	-	-	-	-	0	-	-
PMAR167542:0:T	yes	0	-	1298	1297	1254	1297	0
PMAR167546:0:T	yes	-	-	-	-	0	-	-
PMAR167555:0:T	yes	2	1	0	1275	1262	1275	2
PMAR59920:0:T	no	15	18	19	16	0	16	15
PMAR74546:0:T	yes	-	-	-	-	0	-	-
PMAR74547:0:T	yes	3	2	1	0	-	0	3
PMAR93060:0:T	yes	37	36	35	25	0	25	37
PMEN399739:0:T	yes	0	3	2	1	-	1	0
PMOB403833:0:T	yes	1	-	-	0	1	0	1
PMUL272843:1:T	yes	0	-	-	-	0	-	0
PNAP365044:8:T	yes	303	302	300	301	0	301	303
PPUT160488:0:T	no	3	2	0	1	16	1	3
PPUT351746:0:T	yes	12	11	0	10	12	10	12
PPUT76869:0:T	no	1113	1114	0	1115	-	1115	1113
PRUM264731:0:T	yes	86	145	0	136	1252	136	86
PSP117:0:T	yes	0	-	-	-	11	-	0
PSP296591:2:T	yes	10	9	5	6	0	6	10
PSP312153:0:T	yes	0	1	3	2	49	2	0
PSTU379731:0:T	yes	3	0	1	2	-	2	3
PSYR205918:0:T	yes	4041	9	4042	8	0	8	4041
PSYR223283:2:T	yes	76	75	72	74	0	74	76
PTHE370438:0:T	yes	1508	0	-	-	-	-	1508
PTOR263820:0:T	yes	-	0	3	-	-	-	-
RALB246199:0:T	yes	2	3	1	0	-	0	2
RCAS383372:0:T	yes	1711	0	1934	-	1500	-	-
RDEN375451:2:T	yes	2	1	3	0	2	0	2
RETL347834:5:T	yes	745	744	746	743	0	743	745
REUT264198:3:T	yes	0	1	3	2	7	2	0
REUT381666:2:T	yes	3	1033	0	16	1025	16	3
RFER338969:1:T	yes	1	0	1964	1963	523	1963	1
RLEG216596:6:T	yes	798	797	799	796	0	796	798
RMET266264:1:T	yes	-	-	-	-	0	-	-
RMET266264:2:T	yes	3	2	0	1	-	1	3
RPAL258594:0:T	yes	-	1	0	2	3859	2	-
RPAL316055:0:T	yes	-	-	0	-	5	-	-
RPAL316056:0:T	yes	1	2	21	0	-	0	1
RPAL316057:0:T	yes	0	2	1	3	76	3	0
RPAL316058:0:T	yes	37	39	38	40	0	40	37
RRUB269796:0:T	yes	12	11	0	10	-	10	12
RRUB269796:1:T	yes	-	-	-	-	0	-	-
RSAL288705:0:T	yes	-	-	-	-	0	-	-
RSOL267608:1:T	yes	0	1	3	2	-	2	0
RSP101510:3:F	yes	-	2205	1644	0	1344	0	1
RSP357808:0:T	yes	190	0	2657	-	2496	-	-
RSPH272943:1:T	yes	-	-	-	-	0	-	-
RSPH272943:4:T	yes	-	-	0	-	-	-	-
RSPH349101:0:T	no	2	1	3	0	-	0	2
RSPH349102:5:T	yes	-	-	0	-	-	-	-
RXYL266117:0:T	yes	2542	2526	2540	2541	0	2541	2542
SACI330779:0:T	yes	-	0	1	-	-	-	-
SACI56780:0:T	yes	0	669	1347	1350	1065	1350	0
SAGA205921:0:T	no	0	169	1	2	-	2	0
SAGA208435:0:T	no	0	220	1	2	-	2	0
SAGA211110:0:T	yes	0	218	1	2	-	2	0
SARE391037:0:T	yes	-	0	1	304	-	304	-
SAVE227882:1:F	yes	0	-	3	1	65	1	-
SBAL399599:3:T	yes	1576	0	1557	1575	1661	1575	1576
SBAL402882:1:T	no	1477	0	1475	1476	1548	1476	1477
SBOY300268:1:T	yes	2774	2	0	1	14	2775	2774
SCO:2:F	yes	-	-	0	-	-	-	-
SDEG203122:0:T	yes	14	-	-	13	0	13	14
SDEN318161:0:T	yes	3	1	0	2	-	2	3
SDYS300267:1:T	yes	0	1	3	2	-	1633	0
SELO269084:0:T	yes	1829	1830	1831	1828	0	1828	1829
SENT209261:0:T	no	11	12	14	13	0	2493	2494
SENT220341:0:T	no	3	2	0	1	14	1219	1220
SENT295319:0:T	no	9	10	12	11	0	2879	2878
SENT321314:2:T	no	1744	-	-	1745	0	1745	1744
SENT454169:2:T	no	3	2	0	1	15	1	1862
SERY405948:0:T	yes	67	66	0	470	-	470	-
SFLE198214:0:T	yes	3	2	0	1	15	1705	1704
SFLE373384:0:T	no	3	2	0	1	13	1545	1546
SFUM335543:0:T	yes	2	0	3	1	1091	1	2
SGLO343509:3:T	yes	2102	-	-	2101	0	2101	2102
SGOR29390:0:T	yes	2	11	-	0	-	0	2
SHAL458817:0:T	yes	0	2	3	1	-	1	0
SHIGELLA:0:T	no	3	2	0	1	15	1490	1491
SLAC55218:0:F	yes	-	-	-	-	0	-	-
SLOI323850:0:T	yes	0	2	3	1	-	1	0
SMED366394:2:T	yes	2	86	88	0	-	89	87
SMEL266834:1:T	yes	2	3	1	0	2	0	2
SMUT210007:0:T	yes	580	0	-	583	-	583	-
SONE211586:1:T	yes	1506	0	1478	1504	-	1504	1506
SPEA398579:0:T	no	0	38	21	1	-	1	0
SPNE170187:0:T	yes	2	3	1	0	-	0	-
SPNE171101:0:T	no	2	3	1	0	-	0	-
SPNE487213:0:T	no	2	3	-	0	-	0	-
SPNE487214:0:T	no	2	3	-	0	-	0	2
SPRO399741:1:T	yes	0	-	-	1	-	1	0
SPYO160490:0:T	no	129	0	-	127	-	127	129
SPYO186103:0:T	no	129	0	-	127	-	127	129
SPYO193567:0:T	no	0	132	-	2	-	2	0
SPYO198466:0:T	no	127	0	-	125	-	125	127
SPYO286636:0:T	no	146	0	-	144	-	144	146
SPYO293653:0:T	no	137	0	-	135	-	135	137
SPYO319701:0:T	yes	137	0	-	135	-	135	137
SPYO370551:0:T	no	141	0	-	139	-	139	141
SPYO370552:0:T	no	141	0	-	139	-	139	141
SPYO370553:0:T	no	148	0	-	145	-	145	148
SPYO370554:0:T	yes	144	0	-	142	-	142	144
SRUB309807:1:T	yes	0	3	2	1	-	1	0
SSED425104:0:T	yes	2996	3014	3015	3016	0	3016	2996
SSOL273057:0:T	yes	-	0	1	-	-	-	-
SSON300269:1:T	yes	1760	-	-	1761	0	1761	1760
SSP1131:0:T	yes	3	2	1	0	-	0	3
SSP1148:0:T	yes	2580	38	2031	-	0	-	2580
SSP292414:0:T	yes	2	1	4	0	-	0	2
SSP292414:2:T	yes	-	-	-	-	0	-	-
SSP321327:0:T	yes	-	-	-	-	0	-	-
SSP321332:0:T	yes	-	-	-	-	0	-	-
SSP387093:0:T	yes	1214	1377	1378	1215	0	1215	1214
SSP644076:1:F	yes	-	1	5	0	9	0	-
SSP64471:0:T	yes	-	-	-	-	0	-	-
SSP84588:0:T	yes	226	227	228	229	0	229	226
SSP94122:1:T	yes	0	2	3	1	-	1	0
SSUI391295:0:T	yes	1	0	4	5	-	5	1
SSUI391296:0:T	yes	1	0	4	5	-	5	1
STHE264199:0:T	yes	0	211	1	2	-	2	0
STHE292459:0:T	yes	-	-	-	-	0	-	-
STHE299768:0:T	no	0	229	1	2	-	2	0
STHE322159:2:T	yes	493	688	0	495	-	495	493
STOK273063:0:T	yes	-	1	0	-	-	-	-
STRO369723:0:T	yes	-	-	0	12	-	12	-
STYP99287:1:T	yes	3	2	0	1	15	1	1817
TCRU317025:0:T	yes	-	-	6	-	0	-	-
TDEN243275:0:T	yes	1	-	-	0	-	0	1
TDEN292415:0:T	yes	4	1	2	3	0	3	4
TDEN326298:0:T	yes	-	-	-	-	0	-	-
TELO197221:0:T	yes	2	499	0	1	178	1	2
TERY203124:0:T	yes	400	713	714	-	0	-	400
TPEN368408:1:T	yes	-	-	0	-	-	-	-
TPSE340099:0:T	yes	3	1	0	2	-	2	3
TROS309801:0:T	yes	-	-	-	-	0	-	-
TROS309801:1:T	yes	0	1383	-	-	-	306	-
TSP28240:0:T	yes	2	3	1	0	2	0	2
TTHE262724:1:T	yes	-	-	-	-	0	-	-
TTHE300852:2:T	yes	-	-	-	-	0	-	-
TTUR377629:0:T	yes	2712	2713	2714	2715	0	2715	2712
TVOL273116:0:T	yes	2	0	1	-	-	-	-
TWHI203267:0:T	yes	-	0	2	3	-	3	-
TWHI218496:0:T	no	-	0	2	3	-	3	-
UMET351160:0:T	yes	2	3	-	4	0	4	-
VCHO:0:T	yes	-	-	-	-	0	-	-
VCHO345073:1:T	no	-	-	-	-	0	-	-
VEIS391735:1:T	yes	3	2	0	1	4126	1	3
VFIS312309:2:T	yes	0	-	2	1	-	1	0
VPAR223926:1:T	yes	0	-	7	1	-	1	0
VVUL196600:2:T	yes	0	2	3	1	49	1	0
XAUT78245:1:T	yes	1	2	0	3	-	3	1
XAXO190486:0:T	yes	3	0	1	2	3	2	3
XCAM190485:0:T	yes	15	18	17	16	0	16	15
XCAM314565:0:T	no	3	0	1	2	16	2	3
XCAM316273:0:T	no	10	14	1507	11	0	11	10
XCAM487884:0:T	no	3	0	1	2	13	2	3
XFAS160492:2:T	no	0	3	2	1	356	1	0
XFAS183190:1:T	yes	0	3	2	1	1311	1	0
XFAS405440:0:T	no	0	3	2	1	1374	1	0
XORY291331:0:T	no	0	3	2	1	-	1	0
XORY342109:0:T	yes	0	3	2	1	-	1	0
XORY360094:0:T	no	6	0	2	4	6	4	6
YENT393305:1:T	yes	0	-	2818	1	2808	1	0
YPES187410:5:T	no	0	-	-	1	-	1	0
YPES214092:3:T	no	1	-	-	0	-	0	1
YPES349746:2:T	no	0	-	-	1	711	1	0
YPES360102:3:T	yes	0	-	-	1	2483	1	0
YPES377628:2:T	no	0	-	-	1	909	1	0
YPES386656:2:T	no	752	-	-	751	0	751	752
YPSE273123:2:T	no	0	-	-	1	870	1	0
YPSE349747:2:T	no	0	-	-	1	2822	1	0