CANDIDATE ID: 335

CANDIDATE ID: 335

NUMBER OF GENES: 7
AVERAGE SCORE:    9.9966705e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    7.1428571e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G6242 (ppiD) (b0441)
   Products of gene:
     - G6242-MONOMER (periplasmic folding helper protein)

- EG11003 (tig) (b0436)
   Products of gene:
     - EG11003-MONOMER (trigger factor; a molecular chaperone involved in cell division)
       Reactions:
        peptidylproline (omega = 180)  =  peptidylproline (omega = 0)

- EG10542 (lon) (b0439)
   Products of gene:
     - EG10542-MONOMER (Lon)
     - CPLX0-2881 (DNA-binding, ATP-dependent protease La)
       Reactions:
        EC# 3.4.21.53

- EG10467 (hupB) (b0440)
   Products of gene:
     - EG10467-MONOMER (transcriptional dual regulator HU-β, NS1 (HU-1))
     - CPLX0-2021 (HU transcriptional dual regulator)
       Regulatees:
        TU0-4444 (seqA-pgm)
        TU00093 (mtr)
        TU00088 (tyrP)
        TU0-2644 (micF)
        TU00026 (galETKM)
        TU00025 (galETKM)

- EG10466 (hupA) (b4000)
   Products of gene:
     - EG10466-MONOMER (transcriptional dual regulator HU-α (HU-2))
     - CPLX0-2021 (HU transcriptional dual regulator)
       Regulatees:
        TU0-4444 (seqA-pgm)
        TU00093 (mtr)
        TU00088 (tyrP)
        TU0-2644 (micF)
        TU00026 (galETKM)
        TU00025 (galETKM)

- EG10159 (clpX) (b0438)
   Products of gene:
     - EG10159-MONOMER (ClpX)
     - CPLX0-3102 (ClpX ATP-dependent protease specificity component and chaperone)
     - CPLX0-3108 (ClpAXP)
       Reactions:
        a protein  =  a peptide + a peptide
     - CPLX0-3107 (ClpXP)
       Reactions:
        a protein  =  a peptide + a peptide

- EG10158 (clpP) (b0437)
   Products of gene:
     - EG10158-MONOMER (ClpP)
     - CPLX0-3101 (ClpP serine protease)
       Reactions:
        a protein  =  a peptide + a peptide
     - CPLX0-3108 (ClpAXP)
       Reactions:
        a protein  =  a peptide + a peptide
     - CPLX0-3107 (ClpXP)
       Reactions:
        a protein  =  a peptide + a peptide
     - CPLX0-3104 (ClpAP)
       Reactions:
        a protein  =  a peptide + a peptide



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ORGANISMS CONTAINING AT LEAST 6 GENES FROM THE GROUP:

Total number of orgs: 235
Effective number of orgs (counting one per cluster within 468 clusters): 159

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317587
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329537
YPES386656 ncbi Yersinia pestis Pestoides F7
YPES377628 ncbi Yersinia pestis Nepal5167
YPES360102 ncbi Yersinia pestis Antiqua7
YPES349746 ncbi Yersinia pestis Angola7
YPES214092 ncbi Yersinia pestis CO927
YPES187410 ncbi Yersinia pestis KIM 107
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80817
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A7
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110187
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103317
XFAS405440 ncbi Xylella fastidiosa M127
XFAS183190 ncbi Xylella fastidiosa Temecula17
XFAS160492 ncbi Xylella fastidiosa 9a5c7
XCAM487884 Xanthomonas campestris pv. paulliniae7
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-107
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80047
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339137
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3067
XAUT78245 ncbi Xanthobacter autotrophicus Py26
VVUL216895 ncbi Vibrio vulnificus CMCP67
VVUL196600 ncbi Vibrio vulnificus YJ0167
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106337
VFIS312309 ncbi Vibrio fischeri ES1147
VEIS391735 ncbi Verminephrobacter eiseniae EF01-27
VCHO345073 ncbi Vibrio cholerae O3957
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169617
TTUR377629 ncbi Teredinibacter turnerae T79017
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB47
TSP1755 Thermoanaerobacter sp.7
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332237
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252597
TCRU317025 ncbi Thiomicrospira crunogena XCL-27
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen6
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT27
SSP94122 ncbi Shewanella sp. ANA-37
SSON300269 ncbi Shigella sonnei Ss0467
SSED425104 ncbi Shewanella sediminis HAW-EB37
SPRO399741 ncbi Serratia proteamaculans 5687
SPEA398579 ncbi Shewanella pealeana ATCC 7003457
SONE211586 ncbi Shewanella oneidensis MR-17
SLOI323850 ncbi Shewanella loihica PV-47
SHIGELLA ncbi Shigella flexneri 2a str. 2457T7
SHAL458817 ncbi Shewanella halifaxensis HAW-EB47
SGLO343509 ncbi Sodalis glossinidius morsitans7
SFLE373384 ncbi Shigella flexneri 5 str. 84017
SFLE198214 ncbi Shigella flexneri 2a str. 3017
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4767
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B677
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91507
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT187
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty27
SDYS300267 ncbi Shigella dysenteriae Sd1977
SDEN318161 ncbi Shewanella denitrificans OS2177
SDEG203122 ncbi Saccharophagus degradans 2-407
SBOY300268 ncbi Shigella boydii Sb2277
SBAL402882 ncbi Shewanella baltica OS1857
SBAL399599 ncbi Shewanella baltica OS1957
SALA317655 ncbi Sphingopyxis alaskensis RB22566
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111706
RFER338969 ncbi Rhodoferax ferrireducens T1187
PTHE370438 ncbi Pelotomaculum thermopropionicum SI7
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30007
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a7
PSTU379731 ncbi Pseudomonas stutzeri A15017
PSP56811 Psychrobacter sp.6
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-16
PSP296591 ncbi Polaromonas sp. JS6667
PPUT76869 ncbi Pseudomonas putida GB-17
PPUT351746 ncbi Pseudomonas putida F17
PPUT160488 ncbi Pseudomonas putida KT24407
PPRO298386 ncbi Photobacterium profundum SS97
PNAP365044 ncbi Polaromonas naphthalenivorans CJ27
PMUL272843 ncbi Pasteurella multocida multocida Pm707
PMEN399739 ncbi Pseudomonas mendocina ymp7
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO17
PING357804 ncbi Psychromonas ingrahamii 377
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1257
PFLU220664 ncbi Pseudomonas fluorescens Pf-57
PFLU216595 ncbi Pseudomonas fluorescens SBW257
PFLU205922 ncbi Pseudomonas fluorescens Pf0-17
PENT384676 ncbi Pseudomonas entomophila L487
PCRY335284 ncbi Psychrobacter cryohalolentis K57
PCAR338963 ncbi Pelobacter carbinolicus DSM 23807
PATL342610 ncbi Pseudoalteromonas atlantica T6c7
PARC259536 ncbi Psychrobacter arcticus 273-47
PAER208964 ncbi Pseudomonas aeruginosa PAO17
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA147
OIHE221109 ncbi Oceanobacillus iheyensis HTE8316
OANT439375 ncbi Ochrobactrum anthropi ATCC 491887
NOCE323261 ncbi Nitrosococcus oceani ATCC 197077
NMUL323848 ncbi Nitrosospira multiformis ATCC 251967
NMEN374833 ncbi Neisseria meningitidis 0534427
NMEN272831 ncbi Neisseria meningitidis FAM187
NMEN122587 ncbi Neisseria meningitidis Z24917
NMEN122586 ncbi Neisseria meningitidis MC587
NGON242231 ncbi Neisseria gonorrhoeae FA 10907
NEUT335283 ncbi Nitrosomonas eutropha C917
NEUR228410 ncbi Nitrosomonas europaea ATCC 197187
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124446
MTHE264732 ncbi Moorella thermoacetica ATCC 390736
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E7
MSP400668 ncbi Marinomonas sp. MWYL17
MSP266779 ncbi Chelativorans sp. BNC17
MPET420662 ncbi Methylibium petroleiphilum PM17
MMAG342108 ncbi Magnetospirillum magneticum AMB-17
MLOT266835 ncbi Mesorhizobium loti MAFF3030997
MFLA265072 ncbi Methylobacillus flagellatus KT7
MCAP243233 ncbi Methylococcus capsulatus Bath7
MAQU351348 ncbi Marinobacter aquaeolei VT87
LSPH444177 ncbi Lysinibacillus sphaericus C3-416
LPNE400673 ncbi Legionella pneumophila Corby6
LPNE297246 ncbi Legionella pneumophila Paris7
LPNE297245 ncbi Legionella pneumophila Lens7
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 16
LCHO395495 ncbi Leptothrix cholodnii SP-67
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785787
JSP375286 ncbi Janthinobacterium sp. Marseille7
ILOI283942 ncbi Idiomarina loihiensis L2TR7
HSOM228400 ncbi Haemophilus somnus 23367
HSOM205914 ncbi Haemophilus somnus 129PT7
HMOD498761 ncbi Heliobacterium modesticaldum Ice17
HINF71421 ncbi Haemophilus influenzae Rd KW207
HINF374930 ncbi Haemophilus influenzae PittEE7
HINF281310 ncbi Haemophilus influenzae 86-028NP7
HHAL349124 ncbi Halorhodospira halophila SL17
HDUC233412 ncbi Haemophilus ducreyi 35000HP7
HCHE349521 ncbi Hahella chejuensis KCTC 23967
HARS204773 ncbi Herminiimonas arsenicoxydans7
GURA351605 ncbi Geobacter uraniireducens Rf47
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-27
GSUL243231 ncbi Geobacter sulfurreducens PCA7
GMET269799 ncbi Geobacter metallireducens GS-157
GKAU235909 ncbi Geobacillus kaustophilus HTA4267
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-007
FTUL418136 ncbi Francisella tularensis tularensis WY96-34187
FTUL401614 ncbi Francisella novicida U1127
FTUL393115 ncbi Francisella tularensis tularensis FSC1987
FTUL393011 ncbi Francisella tularensis holarctica OSU187
FTUL351581 Francisella tularensis holarctica FSC2006
FRANT ncbi Francisella tularensis tularensis SCHU S47
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250177
ESP42895 Enterobacter sp.7
ELIT314225 ncbi Erythrobacter litoralis HTCC25946
EFER585054 ncbi Escherichia fergusonii ATCC 354697
ECOO157 ncbi Escherichia coli O157:H7 EDL9337
ECOL83334 Escherichia coli O157:H77
ECOL585397 ncbi Escherichia coli ED1a7
ECOL585057 ncbi Escherichia coli IAI397
ECOL585056 ncbi Escherichia coli UMN0267
ECOL585055 ncbi Escherichia coli 559897
ECOL585035 ncbi Escherichia coli S887
ECOL585034 ncbi Escherichia coli IAI17
ECOL481805 ncbi Escherichia coli ATCC 87397
ECOL469008 ncbi Escherichia coli BL21(DE3)7
ECOL439855 ncbi Escherichia coli SMS-3-57
ECOL413997 ncbi Escherichia coli B str. REL6067
ECOL409438 ncbi Escherichia coli SE117
ECOL405955 ncbi Escherichia coli APEC O17
ECOL364106 ncbi Escherichia coli UTI897
ECOL362663 ncbi Escherichia coli 5367
ECOL331111 ncbi Escherichia coli E24377A7
ECOL316407 ncbi Escherichia coli K-12 substr. W31107
ECOL199310 ncbi Escherichia coli CFT0737
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10437
DRED349161 ncbi Desulfotomaculum reducens MI-17
DPSY177439 ncbi Desulfotalea psychrophila LSv546
DNOD246195 ncbi Dichelobacter nodosus VCS1703A7
DHAF138119 ncbi Desulfitobacterium hafniense Y517
DARO159087 ncbi Dechloromonas aromatica RCB7
CVIO243365 ncbi Chromobacterium violaceum ATCC 124727
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA6
CSAL290398 ncbi Chromohalobacter salexigens DSM 30437
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)7
CPSY167879 ncbi Colwellia psychrerythraea 34H7
CPHY357809 ncbi Clostridium phytofermentans ISDg6
CNOV386415 ncbi Clostridium novyi NT7
CJAP155077 Cellvibrio japonicus7
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29017
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C6
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1117
CBUR360115 ncbi Coxiella burnetii RSA 3317
CBUR227377 ncbi Coxiella burnetii RSA 4937
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto6
CBOT441771 ncbi Clostridium botulinum A str. Hall6
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193976
BWEI315730 ncbi Bacillus weihenstephanensis KBAB47
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTRI382640 ncbi Bartonella tribocorum CIP 1054767
BTHU412694 ncbi Bacillus thuringiensis Al Hakam7
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-277
BSUI470137 ncbi Brucella suis ATCC 234457
BSUI204722 ncbi Brucella suis 13307
BSUB ncbi Bacillus subtilis subtilis 1687
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)7
BQUI283165 ncbi Bartonella quintana Toulouse7
BPUM315750 ncbi Bacillus pumilus SAFR-0326
BPET94624 Bordetella petrii7
BPER257313 ncbi Bordetella pertussis Tohama I7
BPAR257311 ncbi Bordetella parapertussis 128227
BOVI236 Brucella ovis7
BMEL359391 ncbi Brucella melitensis biovar Abortus 23087
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M7
BLIC279010 ncbi Bacillus licheniformis ATCC 145807
BHEN283166 ncbi Bartonella henselae Houston-17
BHAL272558 ncbi Bacillus halodurans C-1256
BCLA66692 ncbi Bacillus clausii KSM-K167
BCIC186490 Candidatus Baumannia cicadellinicola6
BCER572264 ncbi Bacillus cereus 03BB1027
BCER405917 Bacillus cereus W7
BCER315749 ncbi Bacillus cytotoxicus NVH 391-987
BCER288681 ncbi Bacillus cereus E33L7
BCER226900 ncbi Bacillus cereus ATCC 145797
BCAN483179 ncbi Brucella canis ATCC 233657
BBRO257310 ncbi Bordetella bronchiseptica RB507
BBAC360095 ncbi Bartonella bacilliformis KC5837
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)7
BANT592021 ncbi Bacillus anthracis A02487
BANT568206 ncbi Bacillus anthracis CDC 6847
BANT261594 ncbi Bacillus anthracis Ames Ancestor7
BANT260799 ncbi Bacillus anthracis Sterne7
BAMY326423 ncbi Bacillus amyloliquefaciens FZB426
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9417
ASP62977 ncbi Acinetobacter sp. ADP17
ASP232721 ncbi Acidovorax sp. JS427
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4497
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL037
APLE416269 ncbi Actinobacillus pleuropneumoniae L207
AHYD196024 Aeromonas hydrophila dhakensis7
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-17
ACAU438753 ncbi Azorhizobium caulinodans ORS 5716
ABOR393595 ncbi Alcanivorax borkumensis SK27
ABAU360910 ncbi Bordetella avium 197N7
AAVE397945 ncbi Acidovorax citrulli AAC00-17


Names of the homologs of the genes in the group in each of these orgs
  G6242   EG11003   EG10542   EG10467   EG10466   EG10159   EG10158   
YPSE349747 YPSIP31758_3088YPSIP31758_3093YPSIP31758_3090YPSIP31758_3089YPSIP31758_3846YPSIP31758_3091YPSIP31758_3092
YPSE273123 YPTB0963YPTB0958YPTB0961YPTB0962YPTB0297YPTB0960YPTB0959
YPES386656 YPDSF_2788YPDSF_2794YPDSF_2791YPDSF_2790YPDSF_3729YPDSF_2792YPDSF_2793
YPES377628 YPN_0937YPN_0932YPN_0935YPN_0936YPN_0234YPN_0934YPN_0933
YPES360102 YPA_2648YPA_2653YPA_2650YPA_2649YPA_3604YPA_2651YPA_2652
YPES349746 YPANGOLA_A3049YPANGOLA_A3055YPANGOLA_A3052YPANGOLA_A3051YPANGOLA_A0462YPANGOLA_A3053YPANGOLA_A3054
YPES214092 YPO3153YPO3158YPO3155YPO3154YPO3731YPO3156YPO3157
YPES187410 Y1031Y1026Y1029Y1030Y0499Y1028Y1027
YENT393305 YE3130YE3135YE3132YE3131YE0300YE3133YE3134
XORY360094 XOOORF_4314XOOORF_4322XOOORF_4319XOOORF_4318XOOORF_4318XOOORF_4320XOOORF_4321
XORY342109 XOO0936XOO0931XOO0934XOO0935XOO0935XOO0933XOO0932
XORY291331 XOO1037XOO1032XOO1035XOO1036XOO1036XOO1034XOO1033
XFAS405440 XFASM12_0533XFASM12_0528XFASM12_0531XFASM12_0532XFASM12_0532XFASM12_0530XFASM12_0529
XFAS183190 PD_0478PD_0471PD_0474PD_0475PD_0475PD_0473PD_0472
XFAS160492 XF1191XF1186XF1189XF1190XF1190XF1188XF1187
XCAM487884 XCC-B100_3376XCC-B100_3382XCC-B100_3378XCC-B100_3377XCC-B100_3377XCC-B100_3379XCC-B100_3381
XCAM316273 XCAORF_1182XCAORF_1173XCAORF_1177XCAORF_1178XCAORF_1178XCAORF_1176XCAORF_1175
XCAM314565 XC_3261XC_3266XC_3263XC_3262XC_3262XC_3264XC_3265
XCAM190485 XCC0982XCC0974XCC0977XCC0978XCC0978XCC0976XCC0975
XAXO190486 XAC1085XAC1077XAC1080XAC1081XAC1081XAC1079XAC1078
XAUT78245 XAUT_4379XAUT_3590XAUT_3593XAUT_3594XAUT_3592XAUT_3591
VVUL216895 VV1_0018VV1_0024VV1_0021VV1_0019VV1_1224VV1_0022VV1_0023
VVUL196600 VV1108VV1103VV1106VV1107VV3145VV1105VV1104
VPAR223926 VP0921VP0916VP0919VP0920VP2911VP0918VP0917
VFIS312309 VF0800VF0795VF0798VF0799VF2397VF0797VF0796
VEIS391735 VEIS_2696VEIS_4370VEIS_4373VEIS_2697VEIS_2697VEIS_4372VEIS_4371
VCHO345073 VC0395_A1508VC0395_A1513VC0395_A1510VC0395_A1509VC0395_A2650VC0395_A1511VC0395_A1512
VCHO VC1918VC1923VC1920VC1919VC0273VC1921VC1922
TTUR377629 TERTU_1628TERTU_1623TERTU_1626TERTU_1627TERTU_1627TERTU_1625TERTU_1624
TTEN273068 TTE2564TTE0624TTE0627TTE2453TTE2453TTE0626TTE0625
TSP1755 TETH514_0594TETH514_2302TETH514_2299TETH514_0687TETH514_0687TETH514_2300TETH514_2301
TPSE340099 TETH39_0170TETH39_1652TETH39_1649TETH39_0249TETH39_0249TETH39_1650TETH39_1651
TDEN292415 TBD_1673TBD_1678TBD_1675TBD_1674TBD_0007TBD_1676TBD_1677
TCRU317025 TCR_1096TCR_1176TCR_1179TCR_1180TCR_1180TCR_1178TCR_1177
SWOL335541 SWOL_0659SWOL_1657SWOL_1653SWOL_0083SWOL_1655SWOL_1656
STYP99287 STM0452STM0447STM0450STM0451STM4170STM0449STM0448
SSP94122 SHEWANA3_2657SHEWANA3_2662SHEWANA3_2659SHEWANA3_2658SHEWANA3_2658SHEWANA3_2660SHEWANA3_2661
SSON300269 SSO_0424SSO_0419SSO_0422SSO_0423SSO_4173SSO_0421SSO_0420
SSED425104 SSED_1545SSED_1540SSED_1543SSED_1544SSED_1544SSED_1542SSED_1541
SPRO399741 SPRO_1099SPRO_1094SPRO_1097SPRO_1098SPRO_0290SPRO_1096SPRO_1095
SPEA398579 SPEA_2677SPEA_2682SPEA_2679SPEA_2678SPEA_2678SPEA_2680SPEA_2681
SONE211586 SO_1798SO_1793SO_1796SO_1797SO_1797SO_1795SO_1794
SLOI323850 SHEW_2504SHEW_2509SHEW_2506SHEW_2505SHEW_2505SHEW_2507SHEW_2508
SHIGELLA YBAUTIGLONHUPBHUPACLPXCLPP
SHAL458817 SHAL_2764SHAL_2769SHAL_2766SHAL_2765SHAL_2765SHAL_2767SHAL_2768
SGLO343509 SG0675SG0670SG0673SG0674SG0141SG0672SG0671
SFLE373384 SFV_0415SFV_0410SFV_0413SFV_0414SFV_4072SFV_0412SFV_0411
SFLE198214 AAN42042.1AAN42037.1AAN42040.1AAN42041.1AAN45501.1AAN42039.1AAN42038.1
SENT454169 SEHA_C0555SEHA_C0550SEHA_C0553SEHA_C0554SEHA_C4501SEHA_C0552SEHA_C0551
SENT321314 SCH_0494SCH_0489SCH_0492SCH_0493SCH_4051SCH_0491SCH_0490
SENT295319 SPA2270SPA2275SPA2272SPA2271SPA4007SPA2273SPA2274
SENT220341 STY0494STY0489STY0492STY0493STY3715STY0491STY0490
SENT209261 T2408T2413T2410T2409T3461T2411T2412
SDYS300267 SDY_0291SDY_0296SDY_0293SDY_0292SDY_3726SDY_0294SDY_0295
SDEN318161 SDEN_2491SDEN_2496SDEN_2493SDEN_2492SDEN_2492SDEN_2494SDEN_2495
SDEG203122 SDE_1612SDE_1607SDE_1610SDE_1611SDE_1611SDE_1609SDE_1608
SBOY300268 SBO_0335SBO_0330SBO_0333SBO_0334SBO_4021SBO_0332SBO_0331
SBAL402882 SHEW185_1597SHEW185_1592SHEW185_1595SHEW185_1596SHEW185_1596SHEW185_1594SHEW185_1593
SBAL399599 SBAL195_1631SBAL195_1626SBAL195_1629SBAL195_1630SBAL195_1630SBAL195_1628SBAL195_1627
SALA317655 SALA_1173SALA_0843SALA_0798SALA_0799SALA_2743SALA_2742
RRUB269796 RRU_A1890RRU_A1549RRU_A1552RRU_A1553RRU_A1551RRU_A1550
RFER338969 RFER_2249RFER_1553RFER_1556RFER_2248RFER_2248RFER_1555RFER_1554
PTHE370438 PTH_0118PTH_0803PTH_0807PTH_0121PTH_0121PTH_0805PTH_0804
PSYR223283 PSPTO_3722PSPTO_3727PSPTO_3724PSPTO_3723PSPTO_3723PSPTO_3725PSPTO_3726
PSYR205918 PSYR_1751PSYR_1746PSYR_1749PSYR_1750PSYR_1750PSYR_1748PSYR_1747
PSTU379731 PST_2065PST_2060PST_2063PST_2064PST_2064PST_2062PST_2061
PSP56811 PSYCPRWF_1625PSYCPRWF_0307PSYCPRWF_1979PSYCPRWF_1626PSYCPRWF_1626PSYCPRWF_0306
PSP312153 PNUC_0975PNUC_0933PNUC_0936PNUC_2026PNUC_0935PNUC_0934
PSP296591 BPRO_3064BPRO_2029BPRO_2032BPRO_3065BPRO_3065BPRO_2031BPRO_2030
PPUT76869 PPUTGB1_1906PPUTGB1_1901PPUTGB1_1904PPUTGB1_1905PPUTGB1_1905PPUTGB1_1903PPUTGB1_1902
PPUT351746 PPUT_3465PPUT_3470PPUT_3467PPUT_3466PPUT_3466PPUT_3468PPUT_3469
PPUT160488 PP_2304PP_2299PP_2302PP_2303PP_2303PP_2301PP_2300
PPRO298386 PBPRA2633PBPRA2638PBPRA2635PBPRA2634PBPRA3422PBPRA2636PBPRA2637
PNAP365044 PNAP_1634PNAP_2958PNAP_0819PNAP_1633PNAP_1633PNAP_2956PNAP_2957
PMUL272843 PM1979PM1975PM1978PM1732PM1732PM1977PM1976
PMEN399739 PMEN_2054PMEN_2049PMEN_2052PMEN_2053PMEN_2053PMEN_2051PMEN_2050
PLUM243265 PLU3865PLU3870PLU3867PLU3866PLU0492PLU3868PLU3869
PING357804 PING_1469PING_1464PING_1467PING_1468PING_3218PING_1466PING_1465
PHAL326442 PSHAA2058PSHAA2063PSHAA2060PSHAB0462PSHAA2059PSHAA2061PSHAA2062
PFLU220664 PFL_3983PFL_3988PFL_3985PFL_3984PFL_3984PFL_3986PFL_3987
PFLU216595 PFLU3925PFLU3930PFLU3927PFLU3926PFLU3926PFLU3928PFLU3929
PFLU205922 PFL_3693PFL_3698PFL_3695PFL_3694PFL_3694PFL_3696PFL_3697
PENT384676 PSEEN1872PSEEN1867PSEEN1870PSEEN1871PSEEN1871PSEEN1869PSEEN1868
PCRY335284 PCRYO_1652PCRYO_2233PCRYO_1899PCRYO_1653PCRYO_1653PCRYO_2235PCRYO_2234
PCAR338963 PCAR_1050PCAR_1690PCAR_1982PCAR_1686PCAR_1686PCAR_1688PCAR_1689
PATL342610 PATL_3132PATL_3137PATL_3134PATL_3133PATL_3133PATL_3135PATL_3136
PARC259536 PSYC_1473PSYC_1940PSYC_1659PSYC_1474PSYC_1474PSYC_1942PSYC_1941
PAER208964 PA1805PA1800PA1803PA1804PA1804PA1802PA1801
PAER208963 PA14_41190PA14_41250PA14_41220PA14_41210PA14_41210PA14_41230PA14_41240
OIHE221109 OB2078OB2076OB1792OB1792OB2077OB2456
OANT439375 OANT_2050OANT_2280OANT_2204OANT_2203OANT_2203OANT_2205OANT_2206
NOCE323261 NOC_1771NOC_1677NOC_1674NOC_1772NOC_1772NOC_1675NOC_1676
NMUL323848 NMUL_A2336NMUL_A2341NMUL_A2338NMUL_A2337NMUL_A2337NMUL_A2339NMUL_A2340
NMEN374833 NMCC_1119NMCC_1225NMCC_1112NMCC_1111NMCC_1111NMCC_1284NMCC_1224
NMEN272831 NMC1138NMC1250NMC1131NMC1130NMC1130NMC1307NMC1248
NMEN122587 NMA1407NMA1526NMA1398NMA1397NMA1397NMA1585NMA1525
NMEN122586 NMB_1238NMB_1313NMB_1231NMB_1230NMB_1230NMB_1372NMB_1312
NGON242231 NGO0766NGO0592NGO0775NGO0777NGO0777NGO0645NGO0593
NEUT335283 NEUT_0662NEUT_0204NEUT_0970NEUT_0661NEUT_0661NEUT_0202NEUT_0203
NEUR228410 NE2206NE0030NE1278NE2207NE2207NE0032NE0031
NARO279238 SARO_2020SARO_3059SARO_1361SARO_1362SARO_3054SARO_3055
MTHE264732 MOTH_0527MOTH_0531MOTH_0085MOTH_0085MOTH_0529MOTH_0528
MSUC221988 MS1843MS1849MS1844MS0185MS0185MS1846MS1847
MSP400668 MMWYL1_1727MMWYL1_1722MMWYL1_1725MMWYL1_1726MMWYL1_1726MMWYL1_1724MMWYL1_1723
MSP266779 MESO_1637MESO_1790MESO_1171MESO_1172MESO_1172MESO_1170MESO_1169
MPET420662 MPE_A1955MPE_A1291MPE_A1294MPE_A1956MPE_A1956MPE_A1293MPE_A1292
MMAG342108 AMB1814AMB2793AMB2790AMB2181AMB2023AMB2791AMB2792
MLOT266835 MLR0613MLL1054MLR8476MSR8478MSR8478MLR8474MLR8472
MFLA265072 MFLA_1413MFLA_1408MFLA_1411MFLA_0016MFLA_0016MFLA_1410MFLA_1409
MCAP243233 MCA_0533MCA_0528MCA_0531MCA_0532MCA_0532MCA_0530MCA_0529
MAQU351348 MAQU_1836MAQU_1841MAQU_1838MAQU_1837MAQU_1837MAQU_1839MAQU_1840
LSPH444177 BSPH_3980BSPH_3978BSPH_1929BSPH_1929BSPH_3979BSPH_0452
LPNE400673 LPC_1300LPC_1307LPC_1304LPC_1303LPC_1305LPC_1306
LPNE297246 LPP1825LPP1830LPP1827LPP1826LPP1826LPP1828LPP1829
LPNE297245 LPL1821LPL1826LPL1823LPL1822LPL1822LPL1824LPL1825
LPNE272624 LPG1855LPG1862LPG1859LPG1858LPG1860LPG1861
LCHO395495 LCHO_1928LCHO_2545LCHO_2542LCHO_1929LCHO_1929LCHO_2543LCHO_2544
KPNE272620 GKPORF_B4733GKPORF_B4728GKPORF_B4731GKPORF_B4732GKPORF_B3734GKPORF_B4730GKPORF_B4729
JSP375286 MMA_1535MMA_1530MMA_1533MMA_1534MMA_1534MMA_1532MMA_1531
ILOI283942 IL1001IL1006IL1003IL1002IL1002IL1004IL1005
HSOM228400 HSM_1020HSM_0216HSM_1783HSM_0566HSM_0566HSM_0214HSM_0215
HSOM205914 HS_1087HS_1431HS_0489HS_1538HS_1538HS_1433HS_1432
HMOD498761 HM1_0720HM1_0470HM1_0474HM1_0716HM1_0716HM1_0472HM1_0471
HINF71421 HI_1004HI_0713HI_0462HI_0430HI_0430HI_0715HI_0714
HINF374930 CGSHIEE_06960CGSHIEE_08560CGSHIEE_00680CGSHIEE_00840CGSHIEE_00840CGSHIEE_08550CGSHIEE_08555
HINF281310 NTHI1179NTHI0843NTHI0593NTHI0554NTHI0554NTHI0846NTHI0844
HHAL349124 HHAL_0599HHAL_0604HHAL_0601HHAL_0600HHAL_0600HHAL_0602HHAL_0603
HDUC233412 HD_1737HD_0663HD_1149HD_1004HD_1004HD_0218HD_0221
HCHE349521 HCH_02164HCH_02157HCH_02162HCH_02163HCH_02163HCH_02160HCH_02158
HARS204773 HEAR1748HEAR1753HEAR1750HEAR1749HEAR1749HEAR1751HEAR1752
GURA351605 GURA_0141GURA_1914GURA_1917GURA_4407GURA_4407GURA_1916GURA_1915
GTHE420246 GTNG_0564GTNG_2582GTNG_2579GTNG_2149GTNG_2149GTNG_2581GTNG_3011
GSUL243231 GSU_2090GSU_1793GSU_0923GSU_3132GSU_3132GSU_1791GSU_1792
GMET269799 GMET_3548GMET_1874GMET_3214GMET_0355GMET_1608GMET_1872GMET_1873
GKAU235909 GK0656GK2653GK2650GK2215GK2215GK2652GK3062
FTUL458234 FTA_0947FTA_0942FTA_0945FTA_0946FTA_0946FTA_0944FTA_0943
FTUL418136 FTW_1101FTW_1106FTW_1103FTW_1102FTW_1102FTW_1104FTW_1105
FTUL401614 FTN_1053FTN_1058FTN_1055FTN_1054FTN_1054FTN_1056FTN_1057
FTUL393115 FTF0628FTF0623FTF0626FTF0627FTF0627FTF0625FTF0624
FTUL393011 FTH_0881FTH_0876FTH_0879FTH_0880FTH_0880FTH_0878FTH_0877
FTUL351581 FTL_0891FTL_0894FTL_0895FTL_0895FTL_0893FTL_0892
FRANT FT.0629TIGLONHUPBHUPBCLPXCLPP
FPHI484022 FPHI_1536FPHI_1531FPHI_1534FPHI_1535FPHI_1535FPHI_1533FPHI_1532
ESP42895 ENT638_0908ENT638_0903ENT638_0906ENT638_0907ENT638_0213ENT638_0905ENT638_0904
ELIT314225 ELI_06480ELI_01110ELI_03690ELI_03695ELI_01140ELI_01135
EFER585054 EFER_2576EFER_2581EFER_2578EFER_2577EFER_3754EFER_2579EFER_2580
ECOO157 YBAUTIGLONHUPBHUPACLPXCLPP
ECOL83334 ECS0495ECS0490ECS0493ECS0494ECS4923ECS0492ECS0491
ECOL585397 ECED1_0465ECED1_0460ECED1_0463ECED1_0464ECED1_4707ECED1_0462ECED1_0461
ECOL585057 ECIAI39_0232ECIAI39_0237ECIAI39_0234ECIAI39_0233ECIAI39_4390ECIAI39_0235ECIAI39_0236
ECOL585056 ECUMN_0481ECUMN_0476ECUMN_0479ECUMN_0480ECUMN_4524ECUMN_0478ECUMN_0477
ECOL585055 EC55989_0455EC55989_0450EC55989_0453EC55989_0454EC55989_4485EC55989_0452EC55989_0451
ECOL585035 ECS88_0438ECS88_0433ECS88_0436ECS88_0437ECS88_4461ECS88_0435ECS88_0434
ECOL585034 ECIAI1_0445ECIAI1_0440ECIAI1_0443ECIAI1_0444ECIAI1_4215ECIAI1_0442ECIAI1_0441
ECOL481805 ECOLC_3191ECOLC_3196ECOLC_3193ECOLC_3192ECOLC_4025ECOLC_3194ECOLC_3195
ECOL469008 ECBD_3214ECBD_3221ECBD_3216ECBD_3215ECBD_4032ECBD_3219ECBD_3220
ECOL439855 ECSMS35_0484ECSMS35_0479ECSMS35_0482ECSMS35_0483ECSMS35_4448ECSMS35_0481ECSMS35_0480
ECOL413997 ECB_00393ECB_00387ECB_00391ECB_00392ECB_03877ECB_00389ECB_00388
ECOL409438 ECSE_0467ECSE_0462ECSE_0465ECSE_0466ECSE_4288ECSE_0464ECSE_0463
ECOL405955 APECO1_1570APECO1_1575APECO1_1572APECO1_1571APECO1_2475APECO1_1573APECO1_1574
ECOL364106 UTI89_C0469UTI89_C0463UTI89_C0467UTI89_C0468UTI89_C3819UTI89_C0466UTI89_C0465
ECOL362663 ECP_0502ECP_0497ECP_0500ECP_0501ECP_4213ECP_0499ECP_0498
ECOL331111 ECE24377A_0477ECE24377A_0472ECE24377A_0475ECE24377A_0476ECE24377A_4543ECE24377A_0474ECE24377A_0473
ECOL316407 ECK0435:JW0431:B0441ECK0430:JW0426:B0436ECK0433:JW0429:B0439ECK0434:JW0430:B0440ECK3992:JW3964:B4000ECK0432:JW0428:B0438ECK0431:JW0427:B0437
ECOL199310 C0557C0551C0555C0556C4957C0554C0553
ECAR218491 ECA1152ECA1147ECA1150ECA1151ECA0238ECA1149ECA1148
DRED349161 DRED_0112DRED_2563DRED_2559DRED_0115DRED_0115DRED_2561DRED_2562
DPSY177439 DP0996DP2539DP2536DP2169DP2537DP2538
DNOD246195 DNO_0916DNO_0230DNO_0227DNO_0226DNO_0226DNO_0228DNO_0229
DHAF138119 DSY0190DSY3205DSY3195DSY0193DSY0193DSY3204DSY3354
DARO159087 DARO_1933DARO_1719DARO_1716DARO_1715DARO_1715DARO_1717DARO_1718
CVIO243365 CV_2553CV_2559CV_2555CV_2554CV_2554CV_2557CV_2558
CVES412965 COSY_0601COSY_0202COSY_0205COSY_0604COSY_0204COSY_0203
CSAL290398 CSAL_2042CSAL_2047CSAL_2044CSAL_2043CSAL_2043CSAL_2045CSAL_2046
CRUT413404 RMAG_0656RMAG_0204RMAG_0208RMAG_0380RMAG_0380RMAG_0206RMAG_0205
CPSY167879 CPS_3780CPS_3786CPS_3783CPS_3781CPS_1873CPS_3784CPS_3785
CPHY357809 CPHY_0376CPHY_0379CPHY_0133CPHY_0133CPHY_0378CPHY_0377
CNOV386415 NT01CX_1021NT01CX_0372NT01CX_0368NT01CX_1025NT01CX_1025NT01CX_0370NT01CX_0371
CJAP155077 CJA_2002CJA_2007CJA_2004CJA_2003CJA_2003CJA_2005CJA_2006
CHYD246194 CHY_0201CHY_0324CHY_0330CHY_0205CHY_0205CHY_0326CHY_0325
CDES477974 DAUD_0595DAUD_1476DAUD_0075DAUD_0075DAUD_1478DAUD_1479
CBUR434922 COXBU7E912_0540COXBU7E912_0751COXBU7E912_0754COXBU7E912_0508COXBU7E912_0508COXBU7E912_0753COXBU7E912_0752
CBUR360115 COXBURSA331_A1623COXBURSA331_A1214COXBURSA331_A1211COXBURSA331_A1641COXBURSA331_A1641COXBURSA331_A1212COXBURSA331_A1213
CBUR227377 CBU_1451CBU_0737CBU_0740CBU_1464CBU_1464CBU_0739CBU_0738
CBOT536232 CLM_4030CLM_3644CLM_3640CLM_4026CLM_3642CLM_3643
CBOT441771 CLC_3516CLC_3143CLC_3139CLC_3512CLC_3141CLC_3142
CBOT441770 CLB_3619CLB_3269CLB_3265CLB_3615CLB_3267CLB_3268
BWEI315730 BCERKBAB4_1070BCERKBAB4_4318BCERKBAB4_4315BCERKBAB4_1434BCERKBAB4_1434BCERKBAB4_4317BCERKBAB4_4944
BVIE269482 BCEP1808_1852BCEP1808_1856BCEP1808_1853BCEP1808_5520BCEP1808_1854BCEP1808_1855
BTRI382640 BT_0851BT_0881BT_0878BT_0879BT_0879BT_0877BT_0876
BTHU412694 BALH_1026BALH_4066BALH_4063BALH_1364BALH_1364BALH_4065BALH_4642
BTHU281309 BT9727_1066BT9727_4206BT9727_4203BT9727_1392BT9727_1392BT9727_4205BT9727_4829
BSUI470137 BSUIS_A1187BSUIS_A0938BSUIS_A1156BSUIS_A1155BSUIS_A1155BSUIS_A1157BSUIS_A1158
BSUI204722 BR_1139BR_0898BR_1106BR_1105BR_1105BR_1108BR_1109
BSUB BSU00720BSU28230BSU28200BSU22790BSU22790BSU28220BSU34540
BSP107806 BU478BU474BU477BU032BU032BU476BU475
BQUI283165 BQ04830BQ07290BQ05060BQ05070BQ05070BQ05050BQ05040
BPUM315750 BPUM_2464BPUM_2461BPUM_2010BPUM_2010BPUM_2463BPUM_3102
BPET94624 BPET2219BPET2792BPET3852BPET2703BPET2703BPET2790BPET2791
BPER257313 BP1732BP1774BP1777BP3530BP3530BP1776BP1775
BPAR257311 BPP3044BPP2005BPP1033BPP2534BPP2534BPP2007BPP2006
BOVI236 GBOORF1140GBOORF0926GBOORF1107GBOORF1106GBOORF1106GBOORF1109GBOORF1110
BMEL359391 BAB1_1162BAB1_0917BAB1_1130BAB1_1129BAB1_1129BAB1_1131BAB1_1132
BMEL224914 BMEI0845BMEI1069BMEI0876BMEI0877BMEI0877BMEI0875BMEI0874
BLIC279010 BL00855BL00617BL00621BL02787BL02787BL00619BL03605
BHEN283166 BH05670BH05940BH05900BH05910BH05910BH05890BH05880
BHAL272558 BH3053BH3050BH3356BH1309BH3052BH3564
BCLA66692 ABC1527ABC2637ABC2634ABC2917ABC2917ABC2636ABC3026
BCIC186490 BCI_0266BCI_0263BCI_0040BCI_0040BCI_0264BCI_0265
BCER572264 BCA_1205BCA_4585BCA_4582BCA_1569BCA_1569BCA_4584BCA_5279
BCER405917 BCE_1280BCE_4564BCE_4561BCE_1637BCE_1637BCE_4563BCE_5254
BCER315749 BCER98_0809BCER98_3187BCER98_3184BCER98_1233BCER98_1233BCER98_3186BCER98_3694
BCER288681 BCE33L1061BCE33L4217BCE33L4214BCE33L1392BCE33L1392BCE33L4216BCE33L4844
BCER226900 BC_1161BC_4480BC_4477BC_1510BC_1510BC_4479BC_5152
BCAN483179 BCAN_A1158BCAN_A0913BCAN_A1126BCAN_A1125BCAN_A1125BCAN_A1127BCAN_A1128
BBRO257310 BB3007BB2253BB2256BB1979BB1979BB2255BB2254
BBAC360095 BARBAKC583_0527BARBAKC583_0553BARBAKC583_0548BARBAKC583_0550BARBAKC583_0550BARBAKC583_0547BARBAKC583_0546
BAPH198804 BUSG462BUSG458BUSG461BUSG033BUSG033BUSG460BUSG459
BANT592021 BAA_1249BAA_4723BAA_4720BAA_1600BAA_1600BAA_4722BAA_5410
BANT568206 BAMEG_3416BAMEG_4741BAMEG_4737BAMEG_3062BAMEG_3062BAMEG_4740BAMEG_5433
BANT261594 GBAA1169GBAA4705GBAA4702GBAA1531GBAA1531GBAA4704GBAA5380
BANT260799 BAS1084BAS4370BAS4367BAS1420BAS1420BAS4369BAS5000
BAMY326423 RBAM_025290RBAM_025260RBAM_020950RBAM_020950RBAM_025280RBAM_031850
BABO262698 BRUAB1_1145BRUAB1_0910BRUAB1_1112BRUAB1_1111BRUAB1_1111BRUAB1_1114BRUAB1_1115
ASP62977 ACIAD1409ACIAD0533ACIAD1115ACIAD1408ACIAD1408ACIAD0535ACIAD0534
ASP232721 AJS_2620AJS_1208AJS_1211AJS_2621AJS_2621AJS_1210AJS_1209
ASAL382245 ASA_1893ASA_1888ASA_1891ASA_1892ASA_3644ASA_1890ASA_1889
APLE434271 APJL_1021APJL_1533APJL_0394APJL_0115APJL_0115APJL_1291APJL_1292
APLE416269 APL_1003APL_1507APL_0376APL_0114APL_0114APL_1279APL_1280
AHYD196024 AHA_2015AHA_2010AHA_2013AHA_2014AHA_3678AHA_2012AHA_2011
AEHR187272 MLG_2284MLG_2289MLG_2286MLG_2285MLG_2285MLG_2287MLG_2288
ACAU438753 AZC_2209AZC_1607AZC_1610AZC_1611AZC_1609AZC_1608
ABOR393595 ABO_1214ABO_1209ABO_1212ABO_1213ABO_1213ABO_1211ABO_1210
ABAU360910 BAV1969BAV1496BAV2293BAV2121BAV2121BAV1498BAV1497
AAVE397945 AAVE_1733AAVE_1460AAVE_1457AAVE_1666AAVE_1666AAVE_1458AAVE_1459


Organism features enriched in list (features available for 223 out of the 235 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000445358112
Disease:Brucellosis 0.007962455
Disease:Bubonic_plague 0.003003166
Disease:Dysentery 0.003003166
Disease:Gastroenteritis 0.00417461013
Disease:Tularemia 0.007962455
Endospores:No 2.114e-1439211
Endospores:Yes 0.00088163153
GC_Content_Range4:0-40 2.953e-1047213
GC_Content_Range4:40-60 2.435e-14129224
GC_Content_Range7:0-30 0.0000516647
GC_Content_Range7:30-40 6.887e-641166
GC_Content_Range7:40-50 0.002988757117
GC_Content_Range7:50-60 1.147e-1172107
Genome_Size_Range5:0-2 1.910e-1619155
Genome_Size_Range5:4-6 2.138e-20121184
Genome_Size_Range9:0-1 0.0012837327
Genome_Size_Range9:1-2 5.429e-1316128
Genome_Size_Range9:2-3 0.005871935120
Genome_Size_Range9:4-5 2.771e-75996
Genome_Size_Range9:5-6 2.353e-116288
Gram_Stain:Gram_Neg 3.644e-19178333
Gram_Stain:Gram_Pos 7.016e-831150
Habitat:Specialized 0.00541021253
Motility:No 4.755e-1421151
Motility:Yes 4.290e-10138267
Optimal_temp.:- 0.0002303118257
Optimal_temp.:35-37 3.006e-61313
Oxygen_Req:Aerobic 0.006030283185
Oxygen_Req:Anaerobic 0.000250124102
Oxygen_Req:Facultative 0.000384395201
Pathogenic_in:Animal 0.00370453566
Pathogenic_in:No 0.000109366226
Shape:Coccobacillus 0.00002191111
Shape:Coccus 1.908e-81082
Shape:Rod 4.819e-14175347
Shape:Sphere 0.0062982219
Shape:Spiral 0.0015463534
Temp._range:Hyperthermophilic 0.0012659223
Temp._range:Psychrophilic 0.000158499
Temp._range:Thermophilic 0.0096989735



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 169
Effective number of orgs (counting one per cluster within 468 clusters): 147

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX1
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4401
STOK273063 ncbi Sulfolobus tokodaii 70
SSP84588 ncbi Synechococcus sp. WH 81021
SSP64471 ncbi Synechococcus sp. CC93111
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)1
SSOL273057 ncbi Sulfolobus solfataricus P20
SRUB309807 ncbi Salinibacter ruber DSM 138551
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SMAR399550 ncbi Staphylothermus marinus F10
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23381
SARE391037 ncbi Salinispora arenicola CNS-2051
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSP101510 ncbi Rhodococcus jostii RHA11
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP117 Pirellula sp.1
PRUM264731 ncbi Prevotella ruminicola 231
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR146891 ncbi Prochlorococcus marinus AS96011
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85031
PAST100379 Onion yellows phytoplasma1
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE50
NSP35761 Nocardioides sp.1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101521
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS1
MSP164757 ncbi Mycobacterium sp. JLS1
MSP164756 ncbi Mycobacterium sp. MCS1
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-21
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN1
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237791
GVIO251221 ncbi Gloeobacter violaceus PCC 74211
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S851
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI31
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
FALN326424 ncbi Frankia alni ACN14a1
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRAD243230 ncbi Deinococcus radiodurans R11
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CCAV227941 ncbi Chlamydophila caviae GPIC0
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BPSE320372 ncbi Burkholderia pseudomallei 1710b1
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BBUR224326 ncbi Borrelia burgdorferi B310
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB1
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.1
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR329726 ncbi Acaryochloris marina MBIC110171
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
AAUR290340 ncbi Arthrobacter aurescens TC11


Names of the homologs of the genes in the group in each of these orgs
  G6242   EG11003   EG10542   EG10467   EG10466   EG10159   EG10158   
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA1111
TTHE262724 TT_C0746
TPEN368408
TPAL243276 TP_0524
TKOD69014
TFUS269800 TFU_2192
TELO197221 TLR0509
TDEN243275 TDE_0670
TACI273075
STRO369723 STROP_3497
STOK273063
SSP84588 SYNW0065OR2371
SSP64471 GSYN0070
SSP321332 CYB_2581
SSOL273057
SRUB309807 SRU_1416
SPYO186103 SPYM18_1961
SMAR399550
SERY405948 SACE_1362
SARE391037 SARE_3876
SACI330779
RSP101510 RHA1_RO01369
RSAL288705 RSAL33209_3266
PTOR263820
PSP117 RB10829
PRUM264731 GFRORF0842
PMAR93060 P9215_19291
PMAR74547 PMT0063
PMAR74546 PMT9312_1748
PMAR59920 PMN2A_1254
PMAR167555 NATL1_21251
PMAR167546 P9301ORF_1887
PMAR167542 P9515ORF_1928
PMAR167540 PMM1656
PMAR146891 A9601_18651
PISL384616
PINT246198 PIN_A1598
PHOR70601
PGIN242619 PG_0620
PFUR186497
PDIS435591 BDI_1874
PAST100379 PAM449
PARS340102
PAER178306
PACN267747 PPA1571
PABY272844
NSP35761 NOCA_3475
NPHA348780
NFAR247156 NFA13350
MVAN350058 MVAN_4036
MTUB419947 MRA_2483
MTUB336982 TBFG_12482
MTHE349307
MTHE187420
MTBRV RV2457C
MTBCDC MT2532
MSYN262723
MSTA339860
MSP189918 MKMS_3649
MSP164757 MJLS_3581
MSP164756 MMCS_3576
MSME246196 MSMEG_4671
MSED399549
MPUL272635
MPNE272634
MPEN272633 MYPE6910
MMOB267748
MMAZ192952 MM3118
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631 ML1477
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054 MFLV_2591
MGEN243273
MFLO265311
MCAP340047 MCAP_0516
MBUR259564
MBOV410289 BCG_2477C
MBOV233413 MB2484C
MBAR269797 MBAR_A2576
MAVI243243 MAV_1716
MART243272
MAEO419665
MACE188937 MA1862
MABS561007 MAB_1583
LXYL281090 LXX07870
LBOR355277 LBJ_1084
LBOR355276 LBL_1141
LBIF456481 LEPBI_I0970
LBIF355278 LBF_0938
KRAD266940 KRAD_3515
IHOS453591
HWAL362976
HSP64091
HSAL478009
HMUK485914
HMAR272569
HBUT415426
HAUR316274 HAUR_2996
GVIO251221 GLR4196
FSUC59374 FSU1853
FSP1855 FRANEAN1_5272
FSP106370 FRANCCI3_1207
FJOH376686 FJOH_2754
FALN326424 FRAAL1912
DSP255470
DSP216389
DRAD243230 DR_1974
DGEO319795 DGEO_2153
DETH243164
CTRA471473
CTRA471472
CSUL444179
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CJEI306537 JK0546
CHUT269798 CHU_2992
CGLU196627 CG2620
CFEL264202
CEFF196164 CE2291
CDIP257309 DIP1789
CCAV227941
CABO218497
BXEN266265
BTUR314724
BTHE226186 BT_2830
BPSE320372 BURPS1710B_A2675
BLON206672
BHER314723
BGAR290434
BFRA295405 BF2304
BFRA272559 BF2393
BBUR224326
BAPH372461 BCC_295
BAFZ390236
AYEL322098 AYWB_334
AURANTIMONAS
ASP1667 ARTH_2403
APER272557
ANAE240017
AMAR329726 AM1_3449
AFUL224325
ACEL351607 ACEL_0739
AAUR290340 AAUR_2380


Organism features enriched in list (features available for 158 out of the 169 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.172e-8592
Arrangment:Pairs 0.000025814112
Arrangment:Singles 0.003167591286
Disease:Pharyngitis 0.000025588
Disease:bronchitis_and_pneumonitis 0.000025588
Endospores:No 1.966e-1497211
Endospores:Yes 0.0023796653
GC_Content_Range7:0-30 0.00722462047
GC_Content_Range7:30-40 0.002083732166
GC_Content_Range7:70-100 0.0094810711
Genome_Size_Range5:0-2 1.828e-869155
Genome_Size_Range5:4-6 1.290e-725184
Genome_Size_Range9:0-1 2.435e-82127
Genome_Size_Range9:1-2 0.001175648128
Genome_Size_Range9:4-5 0.00031071396
Genome_Size_Range9:5-6 0.00062121288
Gram_Stain:Gram_Neg 4.352e-1352333
Habitat:Aquatic 0.00178123691
Habitat:Multiple 1.938e-724178
Habitat:Specialized 0.00137182453
Motility:No 5.802e-662151
Motility:Yes 0.000048952267
Optimal_temp.:- 0.004439657257
Optimal_temp.:37 0.004834139106
Optimal_temp.:85 0.005245944
Oxygen_Req:Anaerobic 0.000020445102
Oxygen_Req:Facultative 3.050e-1024201
Pathogenic_in:Animal 0.00715331066
Pathogenic_in:Human 0.001252343213
Salinity:Extreme_halophilic 0.001904367
Shape:Irregular_coccus 1.190e-101717
Shape:Rod 9.004e-1062347
Shape:Sphere 1.935e-71619
Temp._range:Hyperthermophilic 2.134e-61723
Temp._range:Mesophilic 0.0053998118473
Temp._range:Thermophilic 0.00727351635



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 15
Effective number of orgs (counting one per cluster within 468 clusters): 10

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum) 0.00029336217
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum) 0.00035866397
BQUI283165 ncbi Bartonella quintana Toulouse 0.00080607177
BBAC360095 ncbi Bartonella bacilliformis KC583 0.00081397187
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00115877557
BHEN283166 ncbi Bartonella henselae Houston-1 0.00151007847
BTRI382640 ncbi Bartonella tribocorum CIP 105476 0.00162177927
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-00 0.00489949277
FTUL393011 ncbi Francisella tularensis holarctica OSU18 0.00493669287
DNOD246195 ncbi Dichelobacter nodosus VCS1703A 0.00577669497
FRANT ncbi Francisella tularensis tularensis SCHU S4 0.00599389547
FTUL393115 ncbi Francisella tularensis tularensis FSC198 0.00617259587
FTUL418136 ncbi Francisella tularensis tularensis WY96-3418 0.00698399757
CBUR360115 ncbi Coxiella burnetii RSA 331 0.00816859977
CBUR227377 ncbi Coxiella burnetii RSA 493 0.009008710117


Names of the homologs of the genes in the group in each of these orgs
  G6242   EG11003   EG10542   EG10467   EG10466   EG10159   EG10158   
BAPH198804 BUSG462BUSG458BUSG461BUSG033BUSG033BUSG460BUSG459
BSP107806 BU478BU474BU477BU032BU032BU476BU475
BQUI283165 BQ04830BQ07290BQ05060BQ05070BQ05070BQ05050BQ05040
BBAC360095 BARBAKC583_0527BARBAKC583_0553BARBAKC583_0548BARBAKC583_0550BARBAKC583_0550BARBAKC583_0547BARBAKC583_0546
CRUT413404 RMAG_0656RMAG_0204RMAG_0208RMAG_0380RMAG_0380RMAG_0206RMAG_0205
BHEN283166 BH05670BH05940BH05900BH05910BH05910BH05890BH05880
BTRI382640 BT_0851BT_0881BT_0878BT_0879BT_0879BT_0877BT_0876
FTUL458234 FTA_0947FTA_0942FTA_0945FTA_0946FTA_0946FTA_0944FTA_0943
FTUL393011 FTH_0881FTH_0876FTH_0879FTH_0880FTH_0880FTH_0878FTH_0877
DNOD246195 DNO_0916DNO_0230DNO_0227DNO_0226DNO_0226DNO_0228DNO_0229
FRANT FT.0629TIGLONHUPBHUPBCLPXCLPP
FTUL393115 FTF0628FTF0623FTF0626FTF0627FTF0627FTF0625FTF0624
FTUL418136 FTW_1101FTW_1106FTW_1103FTW_1102FTW_1102FTW_1104FTW_1105
CBUR360115 COXBURSA331_A1623COXBURSA331_A1214COXBURSA331_A1211COXBURSA331_A1641COXBURSA331_A1641COXBURSA331_A1212COXBURSA331_A1213
CBUR227377 CBU_1451CBU_0737CBU_0740CBU_1464CBU_1464CBU_0739CBU_0738


Organism features enriched in list (features available for 15 out of the 15 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Bacillary_angiomatosis 0.000618922
Disease:Q_fever 0.000618922
Disease:Tularemia 5.443e-955
GC_Content_Range4:0-40 0.000570712213
GC_Content_Range7:30-40 0.001748510166
Genome_Size_Range5:0-2 0.000017312155
Genome_Size_Range9:1-2 0.000185110128
Gram_Stain:Gram_Neg 0.002300314333
Motility:Yes 0.00714032267
Pathogenic_in:Animal 0.0000554866



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181550.5053
GLYCOCAT-PWY (glycogen degradation I)2461670.5027
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001860.4828
PWY-5918 (heme biosynthesis I)2721730.4701
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861780.4660
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911790.4596
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901780.4555
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961800.4532
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951370.4531
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162210.4505
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911340.4450
PWY-1269 (CMP-KDO biosynthesis I)3251880.4336
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222190.4238
AST-PWY (arginine degradation II (AST pathway))120950.4177
PWY-5386 (methylglyoxal degradation I)3051780.4170
PWY-6196 (serine racemization)102840.4074
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251430.4008



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11003   EG10542   EG10467   EG10466   EG10159   EG10158   
G62420.999550.999630.9997740.9995590.9995920.999533
EG110030.9999150.9995150.9991180.9999750.999982
EG105420.9997320.9994770.9999710.999933
EG104670.9999340.9996410.999583
EG104660.999350.999257
EG101590.999987
EG10158



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PAIRWISE BLAST SCORES:

  G6242   EG11003   EG10542   EG10467   EG10466   EG10159   EG10158   
G62420.0f0------
EG11003-0.0f0-----
EG10542--0.0f0----
EG10467---0.0f08.7e-20--
EG10466---1.3e-250.0f0--
EG10159-----0.0f0-
EG10158------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-2021 (HU transcriptional dual regulator) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.286, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9995 EG10467 (hupB) EG10467-MONOMER (transcriptional dual regulator HU-β, NS1 (HU-1))
   *in cand* 0.9995 0.9991 EG10466 (hupA) EG10466-MONOMER (transcriptional dual regulator HU-α (HU-2))
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9998 0.9993 EG10158 (clpP) EG10158-MONOMER (ClpP)
   *in cand* 0.9998 0.9993 EG10159 (clpX) EG10159-MONOMER (ClpX)
   *in cand* 0.9998 0.9995 EG10542 (lon) EG10542-MONOMER (Lon)
   *in cand* 0.9997 0.9991 EG11003 (tig) EG11003-MONOMER (trigger factor; a molecular chaperone involved in cell division)
   *in cand* 0.9997 0.9995 G6242 (ppiD) G6242-MONOMER (periplasmic folding helper protein)

- CPLX0-3107 (ClpXP) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.286, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9993 EG10159 (clpX) EG10159-MONOMER (ClpX)
   *in cand* 0.9998 0.9993 EG10158 (clpP) EG10158-MONOMER (ClpP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9991 EG10466 (hupA) EG10466-MONOMER (transcriptional dual regulator HU-α (HU-2))
   *in cand* 0.9997 0.9995 EG10467 (hupB) EG10467-MONOMER (transcriptional dual regulator HU-β, NS1 (HU-1))
   *in cand* 0.9998 0.9995 EG10542 (lon) EG10542-MONOMER (Lon)
   *in cand* 0.9997 0.9991 EG11003 (tig) EG11003-MONOMER (trigger factor; a molecular chaperone involved in cell division)
   *in cand* 0.9997 0.9995 G6242 (ppiD) G6242-MONOMER (periplasmic folding helper protein)

- CPLX0-3108 (ClpAXP) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.286, average score: 0.946)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9993 EG10159 (clpX) EG10159-MONOMER (ClpX)
             0.9445 0.9069 EG10156 (clpA) EG10156-MONOMER (ClpA)
   *in cand* 0.9998 0.9993 EG10158 (clpP) EG10158-MONOMER (ClpP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9991 EG10466 (hupA) EG10466-MONOMER (transcriptional dual regulator HU-α (HU-2))
   *in cand* 0.9997 0.9995 EG10467 (hupB) EG10467-MONOMER (transcriptional dual regulator HU-β, NS1 (HU-1))
   *in cand* 0.9998 0.9995 EG10542 (lon) EG10542-MONOMER (Lon)
   *in cand* 0.9997 0.9991 EG11003 (tig) EG11003-MONOMER (trigger factor; a molecular chaperone involved in cell division)
   *in cand* 0.9997 0.9995 G6242 (ppiD) G6242-MONOMER (periplasmic folding helper protein)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10158 EG10159 EG10467 EG10542 EG11003 G6242 (centered at EG10542)
EG10466 (centered at EG10466)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6242   EG11003   EG10542   EG10467   EG10466   EG10159   EG10158   
344/623418/623379/623299/623294/623417/623413/623
AAEO224324:0:Tyes256-0--773774
AAUR290340:2:Tyes-----0-
AAVE397945:0:Tyes2723020520512
ABAC204669:0:Tyes121414973180--0
ABAU360910:0:Tyes464079561961921
ABOR393595:0:Tyes6034421
ABUT367737:0:Tyes78711060---1105
ACAU438753:0:Tyes61003-421
ACEL351607:0:Tyes-----0-
ACRY349163:8:Tyes31603--21
ADEH290397:0:Tyes9641823166--01822
AEHR187272:0:Tyes0521134
AFER243159:0:Tyes-5380-34
AHYD196024:0:Tyes5034159421
ALAI441768:0:Tyes-01----
AMAR234826:0:Tyes149-2---0
AMAR329726:9:Tyes------0
AMET293826:0:Tyes61006--21
AORE350688:0:Tyes51740--23
APHA212042:0:Tyes0-341---343
APLE416269:0:Tyes89114122640011691170
APLE434271:0:Tno87514092730011541155
ASAL382245:5:Tyes5034168321
ASP1667:3:Tyes-----0-
ASP232721:2:Tyes1358031360136021
ASP62928:0:Tyes0514511--512513
ASP62977:0:Tyes844055584384321
ASP76114:2:Tyes98903--21
AVAR240292:3:Tyes-----30690
AYEL322098:4:Tyes-0-----
BABO262698:1:Tno2160185184184187188
BAMB339670:3:Tno063--45
BAMB398577:3:Tno063--45
BAMY326423:0:Tyes-433430004321089
BANT260799:0:Tno03262325933433432613912
BANT261594:2:Tno03256325333433432553892
BANT568206:2:Tyes347161116070016102266
BANT592021:2:Tno03436343334434434354088
BAPH198804:0:Tyes42542142400423422
BAPH372461:0:Tyes--0----
BBAC264462:0:Tyes-15301636001519-
BBAC360095:0:Tyes0242022221918
BBRO257310:0:Tyes102427728000279278
BCAN483179:1:Tno2400208207207209210
BCEN331271:0:Tno603--21
BCEN331272:3:Tyes041--23
BCER226900:1:Tyes03249324634434432483900
BCER288681:0:Tno03136313332932931353783
BCER315749:1:Tyes02263226040840822622744
BCER405917:1:Tyes03106310333433431053768
BCER572264:1:Tno03338333535735733373997
BCIC186490:0:Tyes-19819500196197
BCLA66692:0:Tyes0112611231407140711251516
BFRA272559:1:Tyes--0----
BFRA295405:0:Tno--0----
BHAL272558:0:Tyes-176017572066017592274
BHEN283166:0:Tyes0262223232120
BJAP224911:0:Fyes01391380--137138
BLIC279010:0:Tyes0278527822266226627843508
BMAL243160:1:Tno085--67
BMAL320388:1:Tno0107--89
BMAL320389:1:Tyes0107--89
BMEL224914:1:Tno02313132323029
BMEL359391:1:Tno2110181180180182183
BOVI236:1:Tyes1850155154154157158
BPAR257311:0:Tno1903928014401440930929
BPER257313:0:Tyes03841163416344039
BPET94624:0:Tyes05771664485485575576
BPSE272560:1:Tyes1103--21
BPSE320372:1:Tno0------
BPSE320373:1:Tno0107--89
BPUM315750:0:Tyes-448445004471104
BQUI283165:0:Tyes02142223232120
BSP107806:2:Tyes43843443700436435
BSP36773:2:Tyes063--45
BSP376:0:Tyes09490--9192
BSUB:0:Tyes0292829252366236629273604
BSUI204722:1:Tyes2350202201201204205
BSUI470137:1:Tno2410213212212214215
BTHA271848:1:Tno904--32
BTHE226186:0:Tyes---0---
BTHU281309:1:Tno03120311732332331193735
BTHU412694:1:Tno02895289231831828943467
BTRI382640:1:Tyes0282526262423
BVIE269482:5:Tyes----0--
BVIE269482:7:Tyes041--23
BWEI315730:4:Tyes03161315836436431603804
CACE272562:1:Tyes60740--23
CAULO:0:Tyes07369--7072
CBEI290402:0:Tyes-04--21
CBLO203907:0:Tyes--52--10
CBLO291272:0:Tno--54--10
CBOT36826:1:Tno30540--23
CBOT441770:0:Tyes30240298-23
CBOT441771:0:Tno30540301-23
CBOT441772:1:Tno31340--23
CBOT498213:1:Tno31140--23
CBOT508765:1:Tyes48830--12
CBOT515621:2:Tyes31540--23
CBOT536232:0:Tno33940335-23
CBUR227377:1:Tyes6740368768721
CBUR360115:1:Tno3853040140112
CBUR434922:2:Tno3122923200231230
CCHL340177:0:Tyes---00-27
CCON360104:2:Tyes7361----0
CCUR360105:0:Tyes10390----1
CDES477974:0:Tyes496-13660013681369
CDIF272563:1:Tyes-50--34
CDIP257309:0:Tyes-----0-
CEFF196164:0:Fyes-----0-
CFET360106:0:Tyes01144----1143
CGLU196627:0:Tyes-----0-
CHOM360107:1:Tyes16850----1
CHUT269798:0:Tyes--0----
CHYD246194:0:Tyes011412044116115
CJAP155077:0:Tyes0521134
CJEI306537:0:Tyes-----0-
CJEJ192222:0:Tyes4771----0
CJEJ195099:0:Tno5891----0
CJEJ354242:2:Tyes4721----0
CJEJ360109:0:Tyes10401----0
CJEJ407148:0:Tno4941----0
CKLU431943:1:Tyes031553152--31533154
CNOV386415:0:Tyes0174717434417451746
CPEL335992:0:Tyes-03--21
CPER195102:1:Tyes-40--23
CPER195103:0:Tno-40--23
CPER289380:3:Tyes-40--23
CPHY357809:0:Tyes-24224500244243
CPSY167879:0:Tyes1845185118481846018491850
CRUT413404:0:Tyes4230416116121
CSAL290398:0:Tyes0521134
CSP501479:8:Fyes140213601893--10
CSP78:2:Tyes08379--8082
CTEP194439:0:Tyes---0--1371
CTET212717:0:Tyes020052001--20032004
CVES412965:0:Tyes38403385-21
CVIO243365:0:Tyes0843367
DARO159087:0:Tyes221410023
DDES207559:0:Tyes0-825-1368826827
DGEO319795:1:Tyes--0----
DHAF138119:0:Tyes0306130513330603214
DNOD246195:0:Tyes666410023
DOLE96561:0:Tyes0-2456--24552454
DPSY177439:2:Tyes015881585-120415861587
DRAD243230:3:Tyes--0----
DRED349161:0:Tyes0247624723324742475
DSHI398580:5:Tyes416819397--01
DVUL882:1:Tyes0-270--269268
ECAN269484:0:Tyes131-2--10
ECAR218491:0:Tyes9209159189190917916
ECHA205920:0:Tyes0-160--161162
ECOL199310:0:Tno6045432532
ECOL316407:0:Tno5034284321
ECOL331111:6:Tno5034390521
ECOL362663:0:Tno5034370621
ECOL364106:1:Tno6045334532
ECOL405955:2:Tyes5034364721
ECOL409438:6:Tyes5034391321
ECOL413997:0:Tno6045352421
ECOL439855:4:Tno5034383521
ECOL469008:0:Tno072182356
ECOL481805:0:Tno052183434
ECOL585034:0:Tno6045371821
ECOL585035:0:Tno6045388921
ECOL585055:0:Tno6045399221
ECOL585056:2:Tno6045405821
ECOL585057:0:Tno0621417145
ECOL585397:0:Tno6045414721
ECOL83334:0:Tno5034455321
ECOLI:0:Tno6045363521
ECOO157:0:Tno5034458521
EFAE226185:3:Tyes-0-805805114153
EFER585054:1:Tyes0621117445
ELIT314225:0:Tyes10940524525-65
ERUM254945:0:Tyes160-2---0
ERUM302409:0:Tno161-2---0
ESP42895:1:Tyes7036987017020700699
FALN326424:0:Tyes-----0-
FJOH376686:0:Tyes--0----
FMAG334413:1:Tyes0310307--308309
FNOD381764:0:Tyes--0--435718
FNUC190304:0:Tyes-30---2
FPHI484022:1:Tyes5034421
FRANT:0:Tno5034421
FSP106370:0:Tyes-----0-
FSP1855:0:Tyes-----0-
FSUC59374:0:Tyes--0----
FTUL351581:0:Tno-034421
FTUL393011:0:Tno5034421
FTUL393115:0:Tyes5034421
FTUL401614:0:Tyes0521134
FTUL418136:0:Tno0521134
FTUL458234:0:Tno5034421
GBET391165:0:Tyes0484480--481482
GFOR411154:0:Tyes--410-0--
GKAU235909:1:Tyes0201820151580158020172445
GMET269799:1:Tyes3202153028660126115281529
GOXY290633:5:Tyes218630--12
GSUL243231:0:Tyes1161865021992199863864
GTHE420246:1:Tyes0198119781555155519802410
GURA351605:0:Tyes0176517684248424817671766
GVIO251221:0:Tyes-----0-
HACI382638:1:Tyes0-----253
HARS204773:0:Tyes0521134
HAUR316274:2:Tyes--0----
HCHE349521:0:Tyes7045521
HDUC233412:0:Tyes132339683070370301
HHAL349124:0:Tyes0743356
HHEP235279:0:Tyes2180----1
HINF281310:0:Tyes5782703500272271
HINF374930:0:Tyes108913810323213791380
HINF71421:0:Tno5692793200281280
HMOD498761:0:Tyes9384094294223
HNEP81032:0:Tyes79910710--1087-
HPY:0:Tno1871----0
HPYL357544:1:Tyes1861----0
HPYL85963:0:Tno1811----0
HSOM205914:1:Tyes599943010431043945944
HSOM228400:0:Tno8242158836136101
ILOI283942:0:Tyes0521134
JSP290400:1:Tyes2730920--1212-
JSP375286:0:Tyes7034421
KPNE272620:2:Tyes9779729759760974973
KRAD266940:2:Fyes-----0-
LACI272621:0:Tyes-0-115115--
LBIF355278:2:Tyes-----0-
LBIF456481:2:Tno-----0-
LBOR355276:1:Tyes------0
LBOR355277:1:Tno------0
LBRE387344:2:Tyes-565-00--
LCAS321967:1:Tyes-360-401401-0
LCHO395495:0:Tyes062662322624625
LDEL321956:0:Tyes-0-682682--
LDEL390333:0:Tyes-0-618618--
LGAS324831:0:Tyes-253-00--
LHEL405566:0:Tyes-0-114114--
LINN272626:1:Tno-0--76811354
LINT189518:1:Tyes-----01
LINT267671:1:Tno-----10
LINT363253:3:Tyes320-2--10
LJOH257314:0:Tyes-0-8282--
LLAC272622:5:Tyes-21-00700-
LLAC272623:0:Tyes-49-00649-
LMES203120:1:Tyes-227-00--
LMON169963:0:Tno-0--69411253
LMON265669:0:Tyes-0--67421147
LPLA220668:0:Tyes-208-00207-
LPNE272624:0:Tno0743-56
LPNE297245:1:Fno0743356
LPNE297246:1:Fyes0743356
LPNE400673:0:Tno0743-56
LREU557436:0:Tyes-0-1131131-
LSAK314315:0:Tyes-46-0045-
LSPH444177:1:Tyes-339833961468146833970
LWEL386043:0:Tyes-0--67611133
LXYL281090:0:Tyes-----0-
MABS561007:1:Tyes-----0-
MACE188937:0:Tyes--0----
MAER449447:0:Tyes-----51330
MAQU351348:2:Tyes0521134
MAVI243243:0:Tyes-----0-
MBAR269797:1:Tyes--0----
MBOV233413:0:Tno-----0-
MBOV410289:0:Tno-----0-
MCAP243233:0:Tyes5034421
MCAP340047:0:Tyes--0----
MEXT419610:0:Tyes224603--21
MFLA265072:0:Tyes1394138913920013911390
MGIL350054:3:Tyes-----0-
MLEP272631:0:Tyes-----0-
MLOT266835:2:Tyes034962306231623162296228
MMAG342108:0:Tyes0979976367209977978
MMAR394221:0:Tyes6703--21
MMAZ192952:0:Tyes--0----
MMYC272632:0:Tyes-01----
MPEN272633:0:Tyes--0----
MPET420662:1:Tyes6600366166121
MSME246196:0:Tyes-----0-
MSP164756:1:Tno-----0-
MSP164757:0:Tno-----0-
MSP189918:2:Tyes-----0-
MSP266779:3:Tyes47562923310
MSP400668:0:Tyes6034421
MSP409:2:Tyes011391142--11411140
MSUC221988:0:Tyes1716172217170017191720
MTBCDC:0:Tno-----0-
MTBRV:0:Tno-----0-
MTHE264732:0:Tyes-43343700435434
MTUB336982:0:Tno-----0-
MTUB419947:0:Tyes-----0-
MVAN350058:0:Tyes-----0-
MXAN246197:0:Tyes61603--21
NARO279238:0:Tyes670172801-17231724
NEUR228410:0:Tyes2215012702218221821
NEUT335283:2:Tyes461276045845801
NFAR247156:2:Tyes-----0-
NGON242231:0:Tyes1590167169169501
NHAM323097:2:Tyes0483480--481482
NMEN122586:0:Tno87810013677
NMEN122587:0:Tyes9111100169110
NMEN272831:0:Tno89710015196
NMEN374833:0:Tno8113100171112
NMUL323848:3:Tyes0521134
NOCE323261:1:Tyes1003010310312
NSEN222891:0:Tyes287-0---391
NSP103690:6:Tyes-----24720
NSP35761:1:Tyes-----0-
NSP387092:0:Tyes89501217---1
NWIN323098:0:Tyes06663--6465
OANT439375:5:Tyes0236157156156158159
OCAR504832:0:Tyes39504--21
OIHE221109:0:Tyes-29229000291676
OTSU357244:0:Fyes0-445---707
PACN267747:0:Tyes-----0-
PAER208963:0:Tyes0632245
PAER208964:0:Tno6034421
PARC259536:0:Tyes047619311478477
PAST100379:0:Tyes-0-----
PATL342610:0:Tyes0521134
PCAR338963:0:Tyes0651943647647649650
PCRY335284:1:Tyes058124711583582
PDIS435591:0:Tyes--0----
PENT384676:0:Tyes5034421
PFLU205922:0:Tyes0632245
PFLU216595:1:Tyes0521134
PFLU220664:0:Tyes0521134
PGIN242619:0:Tyes--0----
PHAL326442:0:Tyes---0---
PHAL326442:1:Tyes052-134
PING357804:0:Tyes5034162421
PINT246198:1:Tyes--0----
PLUM243265:0:Fyes3429343434313430034323433
PLUT319225:0:Tyes1491--1526--0
PMAR146891:0:Tyes------0
PMAR167539:0:Tyes-0----1
PMAR167540:0:Tyes------0
PMAR167542:0:Tyes------0
PMAR167546:0:Tyes------0
PMAR167555:0:Tyes------0
PMAR59920:0:Tno------0
PMAR74546:0:Tyes------0
PMAR74547:0:Tyes-0-----
PMAR93060:0:Tyes------0
PMEN399739:0:Tyes5034421
PMOB403833:0:Tyes----8904600
PMUL272843:1:Tyes24724324600245244
PNAP365044:8:Tyes8222155082082021532154
PPEN278197:0:Tyes-63-00--
PPRO298386:2:Tyes052178634
PPUT160488:0:Tno5034421
PPUT351746:0:Tyes0521134
PPUT76869:0:Tno5034421
PRUM264731:0:Tyes--0----
PSP117:0:Tyes------0
PSP296591:2:Tyes1034031036103621
PSP312153:0:Tyes4603-110621
PSP56811:2:Tyes13311169413321332-0
PSTU379731:0:Tyes5034421
PSYR205918:0:Tyes5034421
PSYR223283:2:Tyes0521134
PTHE370438:0:Tyes070370733705704
RAKA293614:0:Fyes5465810--373156
RALB246199:0:Tyes-17870---1788
RBEL336407:0:Tyes01220638--335244
RBEL391896:0:Fno11900825--407940
RCAN293613:0:Fyes52355087--3960
RCAS383372:0:Tyes--0--475-
RCON272944:0:Tno6657000--456123
RDEN375451:4:Tyes024892398--23102311
RETL347834:5:Tyes5832552--10
REUT264198:3:Tyes603--21
REUT381666:2:Tyes1503--21
RFEL315456:2:Tyes11051142480--0563
RFER338969:1:Tyes6960369569521
RLEG216596:6:Tyes8023792--10
RMAS416276:1:Tyes4534770--32292
RMET266264:2:Tyes041--23
RPAL258594:0:Tyes07572--7374
RPAL316055:0:Tyes8303--21
RPAL316056:0:Tyes7803--21
RPAL316057:0:Tyes07067--6869
RPAL316058:0:Tyes23603--21
RPOM246200:1:Tyes111612571568--0-
RPRO272947:0:Tyes3613810--23970
RRIC392021:0:Fno6206560--427117
RRIC452659:0:Tyes6256640--432112
RRUB269796:1:Tyes341034-21
RSAL288705:0:Tyes-----0-
RSOL267608:1:Tyes703--21
RSP101510:3:Fyes-----0-
RSP357808:0:Tyes--0--879-
RSPH272943:4:Tyes01180865--12321233
RSPH349101:2:Tno01071784--11241125
RSPH349102:5:Tyes19271870--284283
RTYP257363:0:Tno3723920--24970
RXYL266117:0:Tyes0637---635636
SACI56780:0:Tyes093417221874-936-
SAGA205921:0:Tno-0-410410--
SAGA208435:0:Tno-0-396396--
SAGA211110:0:Tyes-0-481481--
SALA317655:1:Tyes3764501-19691968
SARE391037:0:Tyes-----0-
SAUR158878:1:Tno-909-7077079080
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