Org ID | Org Name | # genes in group found in org |
VVUL216895 ncbi | Vibrio vulnificus CMCP6 | 7 |
VVUL196600 ncbi | Vibrio vulnificus YJ016 | 7 |
VCHO345073 ncbi | Vibrio cholerae O395 | 7 |
VCHO ncbi | Vibrio cholerae O1 biovar El Tor str. N16961 | 7 |
TWHI218496 ncbi | Tropheryma whipplei TW08/27 | 7 |
TWHI203267 ncbi | Tropheryma whipplei Twist | 7 |
STYP99287 ncbi | Salmonella enterica enterica serovar Typhimurium str. LT2 | 7 |
SSUI391296 ncbi | Streptococcus suis 98HAH33 | 7 |
SSUI391295 ncbi | Streptococcus suis 05ZYH33 | 7 |
SSON300269 ncbi | Shigella sonnei Ss046 | 7 |
SPYO370554 ncbi | Streptococcus pyogenes MGAS10750 | 7 |
SPYO370553 ncbi | Streptococcus pyogenes MGAS2096 | 7 |
SPYO370552 ncbi | Streptococcus pyogenes MGAS10270 | 7 |
SPYO370551 ncbi | Streptococcus pyogenes MGAS9429 | 7 |
SPYO319701 ncbi | Streptococcus pyogenes MGAS6180 | 7 |
SPYO293653 ncbi | Streptococcus pyogenes MGAS5005 | 7 |
SPYO286636 ncbi | Streptococcus pyogenes MGAS10394 | 7 |
SPYO198466 ncbi | Streptococcus pyogenes MGAS315 | 7 |
SPYO193567 ncbi | Streptococcus pyogenes SSI-1 | 7 |
SPYO186103 ncbi | Streptococcus pyogenes MGAS8232 | 7 |
SPYO160490 ncbi | Streptococcus pyogenes M1 GAS | 7 |
SPRO399741 ncbi | Serratia proteamaculans 568 | 7 |
SPNE488221 ncbi | Streptococcus pneumoniae 70585 | 7 |
SPNE487214 ncbi | Streptococcus pneumoniae Hungary19A-6 | 7 |
SPNE487213 ncbi | Streptococcus pneumoniae Taiwan19F-14 | 7 |
SPNE171101 ncbi | Streptococcus pneumoniae R6 | 7 |
SPNE170187 ncbi | Streptococcus pneumoniae G54 | 7 |
SPNE1313 | Streptococcus pneumoniae | 7 |
SMUT210007 ncbi | Streptococcus mutans UA159 | 7 |
SHIGELLA ncbi | Shigella flexneri 2a str. 2457T | 7 |
SFLE373384 ncbi | Shigella flexneri 5 str. 8401 | 7 |
SFLE198214 ncbi | Shigella flexneri 2a str. 301 | 7 |
SENT454169 ncbi | Salmonella enterica enterica serovar Heidelberg str. SL476 | 7 |
SENT321314 ncbi | Salmonella enterica enterica serovar Choleraesuis str. SC-B67 | 7 |
SENT295319 ncbi | Salmonella enterica enterica serovar Paratyphi A str. ATCC 9150 | 7 |
SENT220341 ncbi | Salmonella enterica enterica serovar Typhi str. CT18 | 7 |
SENT209261 ncbi | Salmonella enterica enterica serovar Typhi str. Ty2 | 7 |
SBOY300268 ncbi | Shigella boydii Sb227 | 7 |
SAGA211110 ncbi | Streptococcus agalactiae NEM316 | 7 |
SAGA208435 ncbi | Streptococcus agalactiae 2603V/R | 7 |
SAGA205921 ncbi | Streptococcus agalactiae A909 | 7 |
PSP117 | Pirellula sp. | 7 |
PPRO298386 ncbi | Photobacterium profundum SS9 | 7 |
PMUL272843 ncbi | Pasteurella multocida multocida Pm70 | 7 |
PACN267747 ncbi | Propionibacterium acnes KPA171202 | 7 |
OIHE221109 ncbi | Oceanobacillus iheyensis HTE831 | 7 |
MSYN262723 ncbi | Mycoplasma synoviae 53 | 7 |
MSUC221988 ncbi | Mannheimia succiniciproducens MBEL55E | 7 |
MPUL272635 ncbi | Mycoplasma pulmonis UAB CTIP | 7 |
MPNE272634 ncbi | Mycoplasma pneumoniae M129 | 7 |
MPEN272633 ncbi | Mycoplasma penetrans HF-2 | 7 |
MHYO295358 ncbi | Mycoplasma hyopneumoniae 232 | 7 |
MHYO262722 ncbi | Mycoplasma hyopneumoniae 7448 | 7 |
MHYO262719 ncbi | Mycoplasma hyopneumoniae J | 7 |
LMES203120 ncbi | Leuconostoc mesenteroides mesenteroides ATCC 8293 | 7 |
LCAS321967 ncbi | Lactobacillus casei ATCC 334 | 7 |
KPNE272620 ncbi | Klebsiella pneumoniae pneumoniae MGH 78578 | 7 |
HSOM228400 ncbi | Haemophilus somnus 2336 | 7 |
HSOM205914 ncbi | Haemophilus somnus 129PT | 7 |
HINF71421 ncbi | Haemophilus influenzae Rd KW20 | 7 |
HDUC233412 ncbi | Haemophilus ducreyi 35000HP | 7 |
EFER585054 ncbi | Escherichia fergusonii ATCC 35469 | 7 |
EFAE226185 ncbi | Enterococcus faecalis V583 | 7 |
ECOO157 ncbi | Escherichia coli O157:H7 EDL933 | 7 |
ECOL83334 | Escherichia coli O157:H7 | 7 |
ECOL585397 ncbi | Escherichia coli ED1a | 7 |
ECOL585057 ncbi | Escherichia coli IAI39 | 7 |
ECOL585056 ncbi | Escherichia coli UMN026 | 7 |
ECOL585055 ncbi | Escherichia coli 55989 | 7 |
ECOL585035 ncbi | Escherichia coli S88 | 7 |
ECOL585034 ncbi | Escherichia coli IAI1 | 7 |
ECOL481805 ncbi | Escherichia coli ATCC 8739 | 7 |
ECOL469008 ncbi | Escherichia coli BL21(DE3) | 7 |
ECOL439855 ncbi | Escherichia coli SMS-3-5 | 7 |
ECOL413997 ncbi | Escherichia coli B str. REL606 | 7 |
ECOL409438 ncbi | Escherichia coli SE11 | 7 |
ECOL405955 ncbi | Escherichia coli APEC O1 | 7 |
ECOL364106 ncbi | Escherichia coli UTI89 | 7 |
ECOL362663 ncbi | Escherichia coli 536 | 7 |
ECOL331111 ncbi | Escherichia coli E24377A | 7 |
ECOL316407 ncbi | Escherichia coli K-12 substr. W3110 | 7 |
ECOL199310 ncbi | Escherichia coli CFT073 | 7 |
CMAQ397948 ncbi | Caldivirga maquilingensis IC-167 | 7 |
BCLA66692 ncbi | Bacillus clausii KSM-K16 | 7 |
APLE434271 ncbi | Actinobacillus pleuropneumoniae serovar 3 str. JL03 | 7 |
APLE416269 ncbi | Actinobacillus pleuropneumoniae L20 | 7 |
AAUR290340 ncbi | Arthrobacter aurescens TC1 | 6 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Arrangment:Chains | 2.121e-6 | 29 | 92 |
Arrangment:Pairs | 0.0009196 | 27 | 112 |
Disease:Dysentery | 0.0002899 | 5 | 6 |
Disease:Gastroenteritis | 0.0047214 | 6 | 13 |
Disease:Meningitis | 0.0090664 | 4 | 7 |
Disease:Pneumonia | 2.638e-6 | 9 | 12 |
Disease:Urinary_tract_infection | 0.0004050 | 4 | 4 |
Disease:Wide_range_of_infections | 3.083e-10 | 11 | 11 |
Disease:endocarditis | 0.0099801 | 3 | 4 |
Endospores:No | 0.0000125 | 48 | 211 |
Endospores:Yes | 0.0082219 | 2 | 53 |
GC_Content_Range4:40-60 | 0.0000329 | 49 | 224 |
GC_Content_Range4:60-100 | 1.361e-10 | 1 | 145 |
GC_Content_Range7:50-60 | 1.912e-6 | 32 | 107 |
GC_Content_Range7:60-70 | 1.225e-9 | 1 | 134 |
Genome_Size_Range5:4-6 | 0.0016841 | 38 | 184 |
Genome_Size_Range5:6-10 | 0.0041751 | 1 | 47 |
Genome_Size_Range9:3-4 | 0.0002801 | 2 | 77 |
Gram_Stain:Gram_Pos | 0.0089389 | 30 | 150 |
Habitat:Aquatic | 0.0001884 | 3 | 91 |
Habitat:Host-associated | 5.262e-8 | 52 | 206 |
Motility:No | 0.0013978 | 33 | 151 |
Optimal_temp.:- | 0.0007176 | 24 | 257 |
Optimal_temp.:20-30 | 0.0090664 | 4 | 7 |
Optimal_temp.:30-35 | 0.0000463 | 6 | 7 |
Optimal_temp.:37 | 5.717e-9 | 36 | 106 |
Oxygen_Req:Aerobic | 1.099e-10 | 4 | 185 |
Oxygen_Req:Anaerobic | 0.0000360 | 3 | 102 |
Oxygen_Req:Facultative | 1.006e-29 | 75 | 201 |
Pathogenic_in:Human | 1.694e-12 | 60 | 213 |
Pathogenic_in:No | 8.104e-10 | 9 | 226 |
Pathogenic_in:Swine | 0.0000560 | 5 | 5 |
Salinity:Non-halophilic | 0.0000165 | 30 | 106 |
Shape:Coccus | 0.0000261 | 25 | 82 |
Shape:Sphere | 0.0091446 | 7 | 19 |
Temp._range:Mesophilic | 0.0000102 | 81 | 473 |
Org ID | Org Name | # genes in group found in org |
ZMOB264203 ncbi | Zymomonas mobilis mobilis ZM4 | 0 |
XORY342109 ncbi | Xanthomonas oryzae pv. oryzae MAFF 311018 | 1 |
XFAS183190 ncbi | Xylella fastidiosa Temecula1 | 1 |
XAUT78245 ncbi | Xanthobacter autotrophicus Py2 | 0 |
WSUC273121 ncbi | Wolinella succinogenes DSM 1740 | 0 |
WPIP955 | Wolbachia pipientis | 0 |
WPIP80849 | Wolbachia endosymbiont of Brugia malayi | 0 |
VFIS312309 ncbi | Vibrio fischeri ES114 | 0 |
UURE95667 | Ureaplasma urealyticum serovar 13 | 0 |
UURE95664 | Ureaplasma urealyticum serovar 10 | 0 |
UPAR505682 ncbi | Ureaplasma parvum serovar 3 str. ATCC 27815 | 0 |
TTUR377629 ncbi | Teredinibacter turnerae T7901 | 0 |
TTHE300852 ncbi | Thermus thermophilus HB8 | 0 |
TTHE262724 ncbi | Thermus thermophilus HB27 | 0 |
TROS309801 ncbi | Thermomicrobium roseum DSM 5159 | 0 |
TPAL243276 ncbi | Treponema pallidum pallidum Nichols | 0 |
TFUS269800 ncbi | Thermobifida fusca YX | 0 |
TERY203124 ncbi | Trichodesmium erythraeum IMS101 | 0 |
TELO197221 ncbi | Thermosynechococcus elongatus BP-1 | 0 |
TDEN326298 ncbi | Sulfurimonas denitrificans DSM 1251 | 0 |
TDEN292415 ncbi | Thiobacillus denitrificans ATCC 25259 | 0 |
TCRU317025 ncbi | Thiomicrospira crunogena XCL-2 | 0 |
TACI273075 ncbi | Thermoplasma acidophilum DSM 1728 | 0 |
STRO369723 ncbi | Salinispora tropica CNB-440 | 0 |
STHE322159 ncbi | Streptococcus thermophilus LMD-9 | 0 |
STHE299768 ncbi | Streptococcus thermophilus CNRZ1066 | 0 |
STHE264199 ncbi | Streptococcus thermophilus LMG 18311 | 0 |
SSP64471 ncbi | Synechococcus sp. CC9311 | 0 |
SSP644076 | Silicibacter sp. TrichCH4B | 0 |
SSP387093 ncbi | Sulfurovum sp. NBC37-1 | 0 |
SSP321332 ncbi | Synechococcus sp. JA-2-3Ba(2-13) | 0 |
SSP321327 ncbi | Synechococcus sp. JA-3-3Ab | 0 |
SSP292414 ncbi | Ruegeria sp. TM1040 | 0 |
SSP1148 ncbi | Synechocystis sp. PCC 6803 | 0 |
SSED425104 ncbi | Shewanella sediminis HAW-EB3 | 0 |
SRUB309807 ncbi | Salinibacter ruber DSM 13855 | 0 |
SPEA398579 ncbi | Shewanella pealeana ATCC 700345 | 0 |
SONE211586 ncbi | Shewanella oneidensis MR-1 | 0 |
SLOI323850 ncbi | Shewanella loihica PV-4 | 0 |
SLAC55218 | Ruegeria lacuscaerulensis | 0 |
SHAL458817 ncbi | Shewanella halifaxensis HAW-EB4 | 0 |
SGOR29390 | Streptococcus gordonii Challis | 0 |
SFUM335543 ncbi | Syntrophobacter fumaroxidans MPOB | 1 |
SELO269084 ncbi | Synechococcus elongatus PCC 6301 | 1 |
SDEN318161 ncbi | Shewanella denitrificans OS217 | 0 |
SBAL402882 ncbi | Shewanella baltica OS185 | 0 |
SBAL399599 ncbi | Shewanella baltica OS195 | 0 |
SARE391037 ncbi | Salinispora arenicola CNS-205 | 0 |
SALA317655 ncbi | Sphingopyxis alaskensis RB2256 | 0 |
SACI56780 ncbi | Syntrophus aciditrophicus SB | 0 |
RTYP257363 ncbi | Rickettsia typhi Wilmington | 0 |
RSPH349102 ncbi | Rhodobacter sphaeroides ATCC 17025 | 0 |
RSP357808 ncbi | Roseiflexus sp. RS-1 | 0 |
RSOL267608 ncbi | Ralstonia solanacearum GMI1000 | 0 |
RSAL288705 ncbi | Renibacterium salmoninarum ATCC 33209 | 0 |
RRIC452659 ncbi | Rickettsia rickettsii Iowa | 0 |
RRIC392021 ncbi | Rickettsia rickettsii Sheila Smith | 0 |
RPRO272947 ncbi | Rickettsia prowazekii Madrid E | 0 |
RPOM246200 ncbi | Ruegeria pomeroyi DSS-3 | 0 |
RPAL316058 ncbi | Rhodopseudomonas palustris HaA2 | 0 |
RPAL316056 ncbi | Rhodopseudomonas palustris BisB18 | 0 |
RPAL316055 ncbi | Rhodopseudomonas palustris BisA53 | 0 |
RPAL258594 ncbi | Rhodopseudomonas palustris CGA009 | 1 |
RMET266264 ncbi | Ralstonia metallidurans CH34 | 0 |
RMAS416276 ncbi | Rickettsia massiliae MTU5 | 0 |
RFER338969 ncbi | Rhodoferax ferrireducens T118 | 1 |
RFEL315456 ncbi | Rickettsia felis URRWXCal2 | 0 |
REUT381666 ncbi | Ralstonia eutropha H16 | 0 |
REUT264198 ncbi | Ralstonia eutropha JMP134 | 0 |
RETL347834 ncbi | Rhizobium etli CFN 42 | 0 |
RCON272944 ncbi | Rickettsia conorii Malish 7 | 0 |
RCAS383372 ncbi | Roseiflexus castenholzii DSM 13941 | 0 |
RCAN293613 ncbi | Rickettsia canadensis McKiel | 0 |
RBEL391896 ncbi | Rickettsia bellii OSU 85-389 | 0 |
RBEL336407 ncbi | Rickettsia bellii RML369-C | 0 |
RAKA293614 ncbi | Rickettsia akari Hartford | 0 |
PTHE370438 ncbi | Pelotomaculum thermopropionicum SI | 0 |
PSTU379731 ncbi | Pseudomonas stutzeri A1501 | 0 |
PSP56811 | Psychrobacter sp. | 0 |
PSP312153 ncbi | Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1 | 0 |
PSP296591 ncbi | Polaromonas sp. JS666 | 0 |
PPUT76869 ncbi | Pseudomonas putida GB-1 | 0 |
PPUT351746 ncbi | Pseudomonas putida F1 | 0 |
PPUT160488 ncbi | Pseudomonas putida KT2440 | 0 |
PNAP365044 ncbi | Polaromonas naphthalenivorans CJ2 | 0 |
PMEN399739 ncbi | Pseudomonas mendocina ymp | 0 |
PMAR93060 ncbi | Prochlorococcus marinus MIT 9215 | 0 |
PMAR74546 ncbi | Prochlorococcus marinus MIT 9312 | 0 |
PMAR59920 ncbi | Prochlorococcus marinus NATL2A | 0 |
PMAR167555 ncbi | Prochlorococcus marinus NATL1A | 0 |
PMAR167546 ncbi | Prochlorococcus marinus MIT 9301 | 0 |
PMAR167542 ncbi | Prochlorococcus marinus MIT 9515 | 0 |
PMAR167540 | Prochlorococcus marinus pastoris MED4ax | 0 |
PMAR167539 ncbi | Prochlorococcus marinus marinus CCMP1375 | 0 |
PMAR146891 ncbi | Prochlorococcus marinus AS9601 | 0 |
PLUT319225 ncbi | Chlorobium luteolum DSM 273 | 0 |
PLUM243265 ncbi | Photorhabdus luminescens laumondii TTO1 | 0 |
PINT246198 | Prevotella intermedia 17 | 0 |
PING357804 ncbi | Psychromonas ingrahamii 37 | 0 |
PGIN242619 ncbi | Porphyromonas gingivalis W83 | 0 |
PFLU216595 ncbi | Pseudomonas fluorescens SBW25 | 1 |
PFLU205922 ncbi | Pseudomonas fluorescens Pf0-1 | 0 |
PENT384676 ncbi | Pseudomonas entomophila L48 | 0 |
PDIS435591 ncbi | Parabacteroides distasonis ATCC 8503 | 0 |
PCRY335284 ncbi | Psychrobacter cryohalolentis K5 | 0 |
PATL342610 ncbi | Pseudoalteromonas atlantica T6c | 0 |
PAST100379 | Onion yellows phytoplasma | 0 |
PARC259536 ncbi | Psychrobacter arcticus 273-4 | 0 |
OTSU357244 ncbi | Orientia tsutsugamushi Boryong | 0 |
OCAR504832 ncbi | Oligotropha carboxidovorans OM5 | 0 |
OANT439375 ncbi | Ochrobactrum anthropi ATCC 49188 | 0 |
NWIN323098 ncbi | Nitrobacter winogradskyi Nb-255 | 0 |
NSP387092 ncbi | Nitratiruptor sp. SB155-2 | 0 |
NSP103690 ncbi | Nostoc sp. PCC 7120 | 0 |
NSEN222891 ncbi | Neorickettsia sennetsu Miyayama | 0 |
NPHA348780 ncbi | Natronomonas pharaonis DSM 2160 | 0 |
NOCE323261 ncbi | Nitrosococcus oceani ATCC 19707 | 0 |
NMUL323848 ncbi | Nitrosospira multiformis ATCC 25196 | 0 |
NMEN374833 ncbi | Neisseria meningitidis 053442 | 0 |
NMEN272831 ncbi | Neisseria meningitidis FAM18 | 0 |
NMEN122587 ncbi | Neisseria meningitidis Z2491 | 0 |
NMEN122586 ncbi | Neisseria meningitidis MC58 | 0 |
NHAM323097 ncbi | Nitrobacter hamburgensis X14 | 0 |
NGON242231 ncbi | Neisseria gonorrhoeae FA 1090 | 0 |
NEUT335283 ncbi | Nitrosomonas eutropha C91 | 0 |
NEUR228410 ncbi | Nitrosomonas europaea ATCC 19718 | 0 |
NARO279238 ncbi | Novosphingobium aromaticivorans DSM 12444 | 0 |
MXAN246197 ncbi | Myxococcus xanthus DK 1622 | 1 |
MVAN350058 ncbi | Mycobacterium vanbaalenii PYR-1 | 0 |
MSP266779 ncbi | Chelativorans sp. BNC1 | 0 |
MSP189918 ncbi | Mycobacterium sp. KMS | 0 |
MSP164757 ncbi | Mycobacterium sp. JLS | 0 |
MSP164756 ncbi | Mycobacterium sp. MCS | 0 |
MPET420662 ncbi | Methylibium petroleiphilum PM1 | 0 |
MMYC272632 ncbi | Mycoplasma mycoides mycoides SC str. PG1 | 0 |
MMOB267748 ncbi | Mycoplasma mobile 163K | 0 |
MMAR394221 ncbi | Maricaulis maris MCS10 | 0 |
MMAG342108 ncbi | Magnetospirillum magneticum AMB-1 | 0 |
MLEP272631 ncbi | Mycobacterium leprae TN | 0 |
MGIL350054 ncbi | Mycobacterium gilvum PYR-GCK | 0 |
MGEN243273 ncbi | Mycoplasma genitalium G37 | 0 |
MFLO265311 ncbi | Mesoplasma florum L1 | 0 |
MEXT419610 ncbi | Methylobacterium extorquens PA1 | 1 |
MCAP340047 ncbi | Mycoplasma capricolum capricolum ATCC 27343 | 0 |
MART243272 ncbi | Mycoplasma arthritidis 158L3-1 | 0 |
MAER449447 ncbi | Microcystis aeruginosa NIES-843 | 0 |
MABS561007 ncbi | Mycobacterium abscessus ATCC 19977 | 0 |
LXYL281090 ncbi | Leifsonia xyli xyli CTCB07 | 0 |
LWEL386043 ncbi | Listeria welshimeri serovar 6b str. SLCC5334 | 0 |
LSPH444177 ncbi | Lysinibacillus sphaericus C3-41 | 0 |
LPNE400673 ncbi | Legionella pneumophila Corby | 0 |
LPNE297246 ncbi | Legionella pneumophila Paris | 0 |
LPNE297245 ncbi | Legionella pneumophila Lens | 0 |
LPNE272624 ncbi | Legionella pneumophila pneumophila Philadelphia 1 | 0 |
LMON265669 ncbi | Listeria monocytogenes 4b F2365 | 0 |
LMON169963 ncbi | Listeria monocytogenes EGD-e | 0 |
LLAC272623 ncbi | Lactococcus lactis lactis Il1403 | 0 |
LLAC272622 ncbi | Lactococcus lactis cremoris SK11 | 0 |
LJOH257314 ncbi | Lactobacillus johnsonii NCC 533 | 0 |
LINT363253 ncbi | Lawsonia intracellularis PHE/MN1-00 | 0 |
LINT267671 ncbi | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 | 0 |
LINT189518 ncbi | Leptospira interrogans serovar Lai str. 56601 | 0 |
LINN272626 ncbi | Listeria innocua Clip11262 | 0 |
LHEL405566 ncbi | Lactobacillus helveticus DPC 4571 | 0 |
LGAS324831 ncbi | Lactobacillus gasseri ATCC 33323 | 0 |
LDEL390333 ncbi | Lactobacillus delbrueckii bulgaricus ATCC 11842 | 0 |
LDEL321956 ncbi | Lactobacillus delbrueckii bulgaricus ATCC BAA-365 | 0 |
LBOR355277 ncbi | Leptospira borgpetersenii serovar Hardjo-bovis JB197 | 0 |
LBOR355276 ncbi | Leptospira borgpetersenii serovar Hardjo-bovis L550 | 0 |
LACI272621 ncbi | Lactobacillus acidophilus NCFM | 0 |
JSP375286 ncbi | Janthinobacterium sp. Marseille | 0 |
ILOI283942 ncbi | Idiomarina loihiensis L2TR | 0 |
HWAL362976 ncbi | Haloquadratum walsbyi DSM 16790 | 0 |
HPYL85963 ncbi | Helicobacter pylori J99 | 0 |
HPYL357544 ncbi | Helicobacter pylori HPAG1 | 0 |
HPY ncbi | Helicobacter pylori 26695 | 0 |
HNEP81032 | Hyphomonas neptunium | 0 |
HMUK485914 ncbi | Halomicrobium mukohataei DSM 12286 | 0 |
HHEP235279 ncbi | Helicobacter hepaticus ATCC 51449 | 0 |
HHAL349124 ncbi | Halorhodospira halophila SL1 | 0 |
HARS204773 ncbi | Herminiimonas arsenicoxydans | 0 |
HACI382638 ncbi | Helicobacter acinonychis Sheeba | 0 |
GVIO251221 ncbi | Gloeobacter violaceus PCC 7421 | 0 |
GURA351605 ncbi | Geobacter uraniireducens Rf4 | 0 |
GSUL243231 ncbi | Geobacter sulfurreducens PCA | 0 |
GOXY290633 ncbi | Gluconobacter oxydans 621H | 0 |
GMET269799 ncbi | Geobacter metallireducens GS-15 | 0 |
GBET391165 ncbi | Granulibacter bethesdensis CGDNIH1 | 0 |
FTUL458234 ncbi | Francisella tularensis holarctica FTNF002-00 | 0 |
FTUL418136 ncbi | Francisella tularensis tularensis WY96-3418 | 0 |
FTUL401614 ncbi | Francisella novicida U112 | 0 |
FTUL393115 ncbi | Francisella tularensis tularensis FSC198 | 0 |
FTUL393011 ncbi | Francisella tularensis holarctica OSU18 | 0 |
FTUL351581 | Francisella tularensis holarctica FSC200 | 0 |
FSUC59374 ncbi | Fibrobacter succinogenes succinogenes S85 | 0 |
FSP1855 | Frankia sp. EAN1pec | 0 |
FSP106370 ncbi | Frankia sp. CcI3 | 0 |
FRANT ncbi | Francisella tularensis tularensis SCHU S4 | 0 |
FPHI484022 ncbi | Francisella philomiragia philomiragia ATCC 25017 | 0 |
FMAG334413 ncbi | Finegoldia magna ATCC 29328 | 0 |
FALN326424 ncbi | Frankia alni ACN14a | 0 |
ERUM302409 ncbi | Ehrlichia ruminantium Gardel | 0 |
ERUM254945 ncbi | Ehrlichia ruminantium Welgevonden | 0 |
ELIT314225 ncbi | Erythrobacter litoralis HTCC2594 | 0 |
ECHA205920 ncbi | Ehrlichia chaffeensis Arkansas | 0 |
ECAN269484 ncbi | Ehrlichia canis Jake | 0 |
DVUL882 ncbi | Desulfovibrio vulgaris Hildenborough | 0 |
DSP255470 ncbi | Dehalococcoides sp. CBDB1 | 0 |
DSP216389 ncbi | Dehalococcoides sp. BAV1 | 0 |
DRAD243230 ncbi | Deinococcus radiodurans R1 | 0 |
DPSY177439 ncbi | Desulfotalea psychrophila LSv54 | 0 |
DOLE96561 ncbi | Desulfococcus oleovorans Hxd3 | 0 |
DNOD246195 ncbi | Dichelobacter nodosus VCS1703A | 0 |
DGEO319795 ncbi | Deinococcus geothermalis DSM 11300 | 0 |
DETH243164 ncbi | Dehalococcoides ethenogenes 195 | 0 |
DDES207559 ncbi | Desulfovibrio desulfuricans desulfuricans G20 | 0 |
CVIO243365 ncbi | Chromobacterium violaceum ATCC 12472 | 0 |
CVES412965 ncbi | Candidatus Vesicomyosocius okutanii HA | 0 |
CTRA471473 ncbi | Chlamydia trachomatis L2b/UCH-1/proctitis | 0 |
CTRA471472 ncbi | Chlamydia trachomatis 434/Bu | 0 |
CTEP194439 ncbi | Chlorobium tepidum TLS | 0 |
CSUL444179 ncbi | Candidatus Sulcia muelleri GWSS | 0 |
CSP501479 | Citreicella sp. SE45 | 1 |
CSAL290398 ncbi | Chromohalobacter salexigens DSM 3043 | 0 |
CRUT413404 ncbi | Candidatus Ruthia magnifica Cm (Calyptogena magnifica) | 0 |
CPSY167879 ncbi | Colwellia psychrerythraea 34H | 0 |
CPRO264201 ncbi | Candidatus Protochlamydia amoebophila UWE25 | 0 |
CPNE182082 ncbi | Chlamydophila pneumoniae TW-183 | 0 |
CPNE138677 ncbi | Chlamydophila pneumoniae J138 | 0 |
CPNE115713 ncbi | Chlamydophila pneumoniae CWL029 | 0 |
CPNE115711 ncbi | Chlamydophila pneumoniae AR39 | 0 |
CPER289380 ncbi | Clostridium perfringens SM101 | 0 |
CPEL335992 ncbi | Candidatus Pelagibacter ubique HTCC1062 | 0 |
CMUR243161 ncbi | Chlamydia muridarum Nigg | 0 |
CKLU431943 ncbi | Clostridium kluyveri DSM 555 | 0 |
CJEJ407148 ncbi | Campylobacter jejuni jejuni 81116 | 0 |
CJEJ360109 ncbi | Campylobacter jejuni doylei 269.97 | 0 |
CJEJ354242 ncbi | Campylobacter jejuni jejuni 81-176 | 0 |
CJEJ195099 ncbi | Campylobacter jejuni RM1221 | 0 |
CJEJ192222 ncbi | Campylobacter jejuni jejuni NCTC 11168 | 0 |
CJEI306537 ncbi | Corynebacterium jeikeium K411 | 0 |
CHUT269798 ncbi | Cytophaga hutchinsonii ATCC 33406 | 0 |
CHOM360107 ncbi | Campylobacter hominis ATCC BAA-381 | 0 |
CGLU196627 ncbi | Corynebacterium glutamicum ATCC 13032 | 0 |
CFET360106 ncbi | Campylobacter fetus fetus 82-40 | 0 |
CFEL264202 ncbi | Chlamydophila felis Fe/C-56 | 0 |
CEFF196164 ncbi | Corynebacterium efficiens YS-314 | 0 |
CDIP257309 ncbi | Corynebacterium diphtheriae NCTC 13129 | 0 |
CCUR360105 ncbi | Campylobacter curvus 525.92 | 0 |
CCON360104 ncbi | Campylobacter concisus 13826 | 0 |
CCHL340177 ncbi | Chlorobium chlorochromatii CaD3 | 0 |
CCAV227941 ncbi | Chlamydophila caviae GPIC | 0 |
CBUR434922 ncbi | Coxiella burnetii Dugway 5J108-111 | 0 |
CBUR360115 ncbi | Coxiella burnetii RSA 331 | 0 |
CBUR227377 ncbi | Coxiella burnetii RSA 493 | 0 |
CBOT536232 ncbi | Clostridium botulinum A2 str. Kyoto | 1 |
CBOT515621 ncbi | Clostridium botulinum Ba4 str. 657 | 0 |
CBOT498213 ncbi | Clostridium botulinum B1 str. Okra | 1 |
CBOT441772 ncbi | Clostridium botulinum F str. Langeland | 0 |
CBOT441771 ncbi | Clostridium botulinum A str. Hall | 1 |
CBOT441770 ncbi | Clostridium botulinum A str. ATCC 19397 | 1 |
CBOT36826 | Clostridium botulinum A | 1 |
CBLO291272 ncbi | Candidatus Blochmannia pennsylvanicus BPEN | 0 |
CBLO203907 ncbi | Candidatus Blochmannia floridanus | 0 |
CAULO ncbi | Caulobacter crescentus CB15 | 0 |
CABO218497 ncbi | Chlamydophila abortus S26/3 | 0 |
BVIE269482 ncbi | Burkholderia vietnamiensis G4 | 0 |
BTUR314724 ncbi | Borrelia turicatae 91E135 | 0 |
BTRI382640 ncbi | Bartonella tribocorum CIP 105476 | 0 |
BSUI204722 ncbi | Brucella suis 1330 | 1 |
BSP36773 | Burkholderia sp. | 1 |
BSP107806 ncbi | Buchnera aphidicola APS (Acyrthosiphon pisum) | 0 |
BQUI283165 ncbi | Bartonella quintana Toulouse | 0 |
BPET94624 | Bordetella petrii | 1 |
BPER257313 ncbi | Bordetella pertussis Tohama I | 0 |
BPAR257311 ncbi | Bordetella parapertussis 12822 | 0 |
BOVI236 | Brucella ovis | 0 |
BMEL359391 ncbi | Brucella melitensis biovar Abortus 2308 | 1 |
BMAL320388 ncbi | Burkholderia mallei SAVP1 | 0 |
BHER314723 ncbi | Borrelia hermsii DAH | 0 |
BHEN283166 ncbi | Bartonella henselae Houston-1 | 0 |
BGAR290434 ncbi | Borrelia garinii PBi | 0 |
BFRA295405 ncbi | Bacteroides fragilis YCH46 | 0 |
BFRA272559 ncbi | Bacteroides fragilis NCTC 9343 | 0 |
BCIC186490 | Candidatus Baumannia cicadellinicola | 0 |
BCER315749 ncbi | Bacillus cytotoxicus NVH 391-98 | 0 |
BCEN331272 ncbi | Burkholderia cenocepacia HI2424 | 1 |
BCEN331271 ncbi | Burkholderia cenocepacia AU 1054 | 0 |
BCAN483179 ncbi | Brucella canis ATCC 23365 | 1 |
BBUR224326 ncbi | Borrelia burgdorferi B31 | 0 |
BBRO257310 ncbi | Bordetella bronchiseptica RB50 | 0 |
BBAC360095 ncbi | Bartonella bacilliformis KC583 | 0 |
BBAC264462 ncbi | Bdellovibrio bacteriovorus HD100 | 0 |
BAPH372461 ncbi | Buchnera aphidicola Cc (Cinara cedri) | 0 |
BAPH198804 ncbi | Buchnera aphidicola Sg (Schizaphis graminum) | 0 |
BAMB398577 ncbi | Burkholderia ambifaria MC40-6 | 0 |
BAMB339670 ncbi | Burkholderia ambifaria AMMD | 0 |
BAFZ390236 ncbi | Borrelia afzelii PKo | 0 |
BABO262698 ncbi | Brucella abortus bv. 1 str. 9-941 | 1 |
AYEL322098 ncbi | Aster yellows witches-broom phytoplasma AYWB | 0 |
AVAR240292 ncbi | Anabaena variabilis ATCC 29413 | 0 |
AURANTIMONAS | Aurantimonas manganoxydans SI85-9A1 | 0 |
ASP62977 ncbi | Acinetobacter sp. ADP1 | 0 |
ASP62928 ncbi | Azoarcus sp. BH72 | 0 |
ASP232721 ncbi | Acidovorax sp. JS42 | 0 |
APHA212042 ncbi | Anaplasma phagocytophilum HZ | 0 |
AORE350688 ncbi | Alkaliphilus oremlandii OhILAs | 0 |
AMAR329726 ncbi | Acaryochloris marina MBIC11017 | 0 |
AMAR234826 ncbi | Anaplasma marginale St. Maries | 0 |
ALAI441768 ncbi | Acholeplasma laidlawii PG-8A | 0 |
AEHR187272 ncbi | Alkalilimnicola ehrlichii MLHE-1 | 0 |
ADEH290397 ncbi | Anaeromyxobacter dehalogenans 2CP-C | 0 |
ACAU438753 ncbi | Azorhizobium caulinodans ORS 571 | 0 |
ABUT367737 ncbi | Arcobacter butzleri RM4018 | 0 |
ABOR393595 ncbi | Alcanivorax borkumensis SK2 | 0 |
ABAU360910 ncbi | Bordetella avium 197N | 0 |
AAVE397945 ncbi | Acidovorax citrulli AAC00-1 | 0 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Arrangment:Chains | 0.0013965 | 34 | 92 |
Arrangment:Clusters | 0.0000849 | 1 | 17 |
Arrangment:Pairs | 0.0000127 | 37 | 112 |
Disease:None | 0.0067019 | 38 | 58 |
Disease:Pharyngitis | 0.0042121 | 8 | 8 |
Disease:Pneumonia | 0.0023141 | 1 | 12 |
Disease:bronchitis_and_pneumonitis | 0.0042121 | 8 | 8 |
Endospores:No | 1.354e-8 | 75 | 211 |
Endospores:Yes | 0.0019265 | 17 | 53 |
GC_Content_Range4:40-60 | 0.0004205 | 95 | 224 |
GC_Content_Range4:60-100 | 0.0045905 | 86 | 145 |
GC_Content_Range7:50-60 | 0.0007735 | 40 | 107 |
GC_Content_Range7:60-70 | 0.0010142 | 83 | 134 |
Genome_Size_Range5:0-2 | 0.0000513 | 99 | 155 |
Genome_Size_Range5:4-6 | 0.0005743 | 76 | 184 |
Genome_Size_Range9:1-2 | 0.0008661 | 80 | 128 |
Genome_Size_Range9:3-4 | 0.0051705 | 49 | 77 |
Genome_Size_Range9:4-5 | 0.0015523 | 36 | 96 |
Gram_Stain:Gram_Neg | 0.0000109 | 194 | 333 |
Gram_Stain:Gram_Pos | 4.240e-8 | 48 | 150 |
Motility:No | 0.0001474 | 58 | 151 |
Optimal_temp.:- | 9.696e-9 | 164 | 257 |
Optimal_temp.:30-37 | 0.0092381 | 4 | 18 |
Oxygen_Req:Aerobic | 0.0047541 | 107 | 185 |
Oxygen_Req:Anaerobic | 0.0055038 | 41 | 102 |
Oxygen_Req:Facultative | 3.770e-9 | 69 | 201 |
Oxygen_Req:Microaerophilic | 0.0033622 | 15 | 18 |
Salinity:Non-halophilic | 0.0093309 | 44 | 106 |
Shape:Coccus | 0.0000123 | 24 | 82 |
Shape:Irregular_coccus | 0.0007365 | 2 | 17 |
Shape:Spiral | 0.0000146 | 29 | 34 |
Org ID | Org Name | Pvalue | # genes in tgt genome found in org | # genes in group found in org |
MPNE272634 ncbi | Mycoplasma pneumoniae M129 | 4.395e-10 | 94 | 7 |
MHYO295358 ncbi | Mycoplasma hyopneumoniae 232 | 7.386e-10 | 101 | 7 |
MHYO262719 ncbi | Mycoplasma hyopneumoniae J | 8.508e-10 | 103 | 7 |
MHYO262722 ncbi | Mycoplasma hyopneumoniae 7448 | 9.122e-10 | 104 | 7 |
MSYN262723 ncbi | Mycoplasma synoviae 53 | 1.046e-9 | 106 | 7 |
MPUL272635 ncbi | Mycoplasma pulmonis UAB CTIP | 4.536e-9 | 130 | 7 |
MPEN272633 ncbi | Mycoplasma penetrans HF-2 | 1.830e-8 | 158 | 7 |
TWHI218496 ncbi | Tropheryma whipplei TW08/27 | 9.464e-8 | 199 | 7 |
TWHI203267 ncbi | Tropheryma whipplei Twist | 1.090e-7 | 203 | 7 |
CMAQ397948 ncbi | Caldivirga maquilingensis IC-167 | 7.495e-6 | 369 | 7 |
SPYO370553 ncbi | Streptococcus pyogenes MGAS2096 | 0.0005847 | 685 | 7 |
SPYO193567 ncbi | Streptococcus pyogenes SSI-1 | 0.0006154 | 690 | 7 |
SPYO198466 ncbi | Streptococcus pyogenes MGAS315 | 0.0006947 | 702 | 7 |
SPYO370551 ncbi | Streptococcus pyogenes MGAS9429 | 0.0007158 | 705 | 7 |
SPYO160490 ncbi | Streptococcus pyogenes M1 GAS | 0.0007597 | 711 | 7 |
SPYO186103 ncbi | Streptococcus pyogenes MGAS8232 | 0.0007597 | 711 | 7 |
SPYO293653 ncbi | Streptococcus pyogenes MGAS5005 | 0.0007903 | 715 | 7 |
SPYO286636 ncbi | Streptococcus pyogenes MGAS10394 | 0.0008139 | 718 | 7 |
SPYO370554 ncbi | Streptococcus pyogenes MGAS10750 | 0.0008798 | 726 | 7 |
SPYO319701 ncbi | Streptococcus pyogenes MGAS6180 | 0.0008884 | 727 | 7 |
SPYO370552 ncbi | Streptococcus pyogenes MGAS10270 | 0.0009412 | 733 | 7 |
SSUI391295 ncbi | Streptococcus suis 05ZYH33 | 0.0010650 | 746 | 7 |
LMES203120 ncbi | Leuconostoc mesenteroides mesenteroides ATCC 8293 | 0.0012249 | 761 | 7 |
SPNE170187 ncbi | Streptococcus pneumoniae G54 | 0.0012945 | 767 | 7 |
SSUI391296 ncbi | Streptococcus suis 98HAH33 | 0.0014832 | 782 | 7 |
SPNE487213 ncbi | Streptococcus pneumoniae Taiwan19F-14 | 0.0014966 | 783 | 7 |
SPNE1313 | Streptococcus pneumoniae | 0.0015790 | 789 | 7 |
SPNE171101 ncbi | Streptococcus pneumoniae R6 | 0.0016361 | 793 | 7 |
SMUT210007 ncbi | Streptococcus mutans UA159 | 0.0016507 | 794 | 7 |
SPNE488221 ncbi | Streptococcus pneumoniae 70585 | 0.0017100 | 798 | 7 |
SPNE487214 ncbi | Streptococcus pneumoniae Hungary19A-6 | 0.0018183 | 805 | 7 |
SAGA211110 ncbi | Streptococcus agalactiae NEM316 | 0.0030375 | 866 | 7 |
PACN267747 ncbi | Propionibacterium acnes KPA171202 | 0.0030622 | 867 | 7 |
SAGA208435 ncbi | Streptococcus agalactiae 2603V/R | 0.0031121 | 869 | 7 |
SAGA205921 ncbi | Streptococcus agalactiae A909 | 0.0031374 | 870 | 7 |
HBUT415426 ncbi | Hyperthermus butylicus DSM 5456 | 0.0054929 | 280 | 5 |
LCAS321967 ncbi | Lactobacillus casei ATCC 334 | 0.0058627 | 951 | 7 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Arrangment:Chains | 8.851e-13 | 24 | 92 |
Disease:Enzootic_pneumonia | 0.0037135 | 2 | 2 |
Disease:Meningitis | 0.0060133 | 3 | 7 |
Disease:Whipple's_disease | 0.0037135 | 2 | 2 |
Disease:Wide_range_of_infections | 9.971e-15 | 11 | 11 |
Disease:and_meningitis | 0.0037135 | 2 | 2 |
Disease:pneumonia | 0.0000245 | 6 | 12 |
Disease:septicemia_and_arthritis | 0.0037135 | 2 | 2 |
Endospores:No | 4.558e-14 | 34 | 211 |
GC_Content_Range4:0-40 | 1.981e-7 | 28 | 213 |
GC_Content_Range7:30-40 | 0.0000195 | 22 | 166 |
Genome_Size_Range5:0-2 | 1.095e-6 | 23 | 155 |
Genome_Size_Range9:0-1 | 0.0000812 | 8 | 27 |
Genome_Size_Range9:1-2 | 0.0032591 | 15 | 128 |
Gram_Stain:Gram_Neg | 1.874e-6 | 7 | 333 |
Gram_Stain:Gram_Pos | 1.654e-9 | 26 | 150 |
Habitat:Host-associated | 0.0000144 | 25 | 206 |
Motility:No | 5.878e-15 | 31 | 151 |
Motility:Yes | 6.042e-7 | 3 | 267 |
Optimal_temp.:- | 0.0009916 | 7 | 257 |
Optimal_temp.:30-35 | 2.432e-7 | 6 | 7 |
Optimal_temp.:35 | 0.0060133 | 3 | 7 |
Optimal_temp.:37 | 0.0001151 | 16 | 106 |
Oxygen_Req:Aerobic | 0.0001029 | 2 | 185 |
Oxygen_Req:Facultative | 5.365e-11 | 31 | 201 |
Pathogenic_in:Human | 6.252e-6 | 26 | 213 |
Pathogenic_in:No | 0.0001424 | 4 | 226 |
Pathogenic_in:Swine | 6.833e-7 | 5 | 5 |
Salinity:Non-halophilic | 2.246e-8 | 21 | 106 |
Shape:Coccus | 6.975e-13 | 23 | 82 |
Shape:Rod | 7.008e-9 | 5 | 347 |
Shape:Sphere | 0.0000513 | 7 | 19 |
Pathway or complex | # Orgs containing it | # of those orgs also containing candidate | Pearson Coeff |
PWY0-301 (L-ascorbate degradation, anaerobic) | 84 | 70 | 0.7900 |
LYXMET-PWY (L-lyxose degradation) | 87 | 62 | 0.6660 |
GLCMANNANAUT-PWY (superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation) | 134 | 70 | 0.5780 |
PWY0-1324 (N-acetylneuraminate and N-acetylmannosamine degradation) | 135 | 70 | 0.5749 |
PWY-1861 (formaldehyde assimilation II (RuMP Cycle)) | 71 | 48 | 0.5550 |
RUMP-PWY (formaldehyde oxidation I) | 68 | 46 | 0.5421 |
P441-PWY (superpathway of N-acetylneuraminate degradation) | 63 | 42 | 0.5100 |
HEXITOLDEGSUPER-PWY (superpathway of hexitol degradation) | 37 | 29 | 0.4670 |
PWY0-1315 (L-lactaldehyde degradation (anaerobic)) | 45 | 31 | 0.4421 |
MANNIDEG-PWY (mannitol degradation I) | 99 | 48 | 0.4329 |
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis) | 50 | 32 | 0.4264 |
SORBDEG-PWY (sorbitol degradation II) | 53 | 33 | 0.4249 |
GLUCUROCAT-PWY (β-D-glucuronide and D-glucuronate degradation) | 208 | 70 | 0.4021 |
G7859 | G7858 | EG12287 | EG12286 | EG12285 | EG10055 | |
G7860 | 0.999234 | 0.999054 | 0.999938 | 0.999077 | 0.998886 | 0.999927 |
G7859 | 0.999281 | 0.998929 | 0.999401 | 0.999099 | 0.998926 | |
G7858 | 0.998627 | 0.999114 | 0.999733 | 0.998629 | ||
EG12287 | 0.999128 | 0.998938 | 0.999939 | |||
EG12286 | 0.999283 | 0.998882 | ||||
EG12285 | 0.998589 | |||||
EG10055 |
G7860 | G7859 | G7858 | EG12287 | EG12286 | EG12285 | EG10055 | |
G7860 | 0.0f0 | - | - | 4.4e-73 | - | - | 1.6e-73 |
G7859 | - | 0.0f0 | - | - | 2.3e-83 | - | - |
G7858 | - | - | 0.0f0 | - | - | 8.7e-52 | - |
EG12287 | 2.8e-69 | - | - | 0.0f0 | - | - | 8.1e-88 |
EG12286 | - | 2.3e-83 | - | - | 0.0f0 | - | - |
EG12285 | - | - | 3.6e-46 | - | - | 0.0f0 | - |
EG10055 | 1.6e-73 | - | - | 1.2e-93 | - | - | 0.0f0 |