CANDIDATE ID: 351

CANDIDATE ID: 351

NUMBER OF GENES: 7
AVERAGE SCORE:    9.9925424e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7321 (yfgM) (b2513)
   Products of gene:
     - G7321-MONOMER (conserved protein)

- G7320 (bamB) (bamB)
   Products of gene:
     - G7320-MONOMER (BamB)
     - CPLX0-3933 (Outer Membrane Protein Assembly Complex)

- G7319 (der) (b2511)
   Products of gene:
     - G7319-MONOMER (50S ribosomal subunit stability factor)
       Reactions:
        GTP + H2O  ->  GDP + phosphate + H+

- EG11072 (xseA) (b2509)
   Products of gene:
     - EG11072-MONOMER (exonuclease VII, large subunit)
     - CPLX-3946 (exonuclease VII)
       Reactions:
        EC# 3.1.11.6

- EG10421 (guaB) (b2508)
   Products of gene:
     - IMP-DEHYDROG-MONOMER (GuaB)
     - IMP-DEHYDROG-CPLX (IMP dehydrogenase)
       Reactions:
        NAD+ + inosine-5'-phosphate + H2O  =  NADH + xanthosine-5-phosphate + H+
         In pathways
         URSIN-PWY (URSIN-PWY)
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         P165-PWY (P165-PWY)
         P121-PWY (P121-PWY)
         PWY-5043 (PWY-5043)
         PWY-5695 (PWY-5695)
         PWY-6125 (guanosine nucleotides de novo biosynthesis)
         PWY-841 (PWY-841)
         PWY-6353 (PWY-6353)
         PWY-5044 (PWY-5044)

- EG10420 (guaA) (b2507)
   Products of gene:
     - GMP-SYN-MONOMER (GMP synthetase)
     - GMP-SYN-CPLX (GMP synthetase)
       Reactions:
        L-glutamine + xanthosine-5-phosphate + ATP + H2O  ->  L-glutamate + GMP + diphosphate + AMP + 3 H+
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-6125 (guanosine nucleotides de novo biosynthesis)
         PWY-841 (PWY-841)
        ATP + xanthosine-5-phosphate + ammonia  ->  AMP + diphosphate + GMP + 2 H+
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-5043 (PWY-5043)
         PWY-6125 (guanosine nucleotides de novo biosynthesis)

- EG10015 (rodZ) (b2516)
   Products of gene:
     - EG10015-MONOMER (rod shape-determining membrane protein)



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ORGANISMS CONTAINING AT LEAST 6 GENES FROM THE GROUP:

Total number of orgs: 169
Effective number of orgs (counting one per cluster within 468 clusters): 108

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317587
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329537
YPES386656 ncbi Yersinia pestis Pestoides F7
YPES377628 ncbi Yersinia pestis Nepal5167
YPES360102 ncbi Yersinia pestis Antiqua7
YPES349746 ncbi Yersinia pestis Angola7
YPES214092 ncbi Yersinia pestis CO927
YPES187410 ncbi Yersinia pestis KIM 107
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80817
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A7
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110187
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103317
XFAS405440 ncbi Xylella fastidiosa M126
XFAS183190 ncbi Xylella fastidiosa Temecula16
XFAS160492 ncbi Xylella fastidiosa 9a5c6
XCAM487884 Xanthomonas campestris pv. paulliniae7
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-107
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80047
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339137
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3067
VVUL216895 ncbi Vibrio vulnificus CMCP67
VVUL196600 ncbi Vibrio vulnificus YJ0167
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106337
VFIS312309 ncbi Vibrio fischeri ES1147
VEIS391735 ncbi Verminephrobacter eiseniae EF01-26
VCHO345073 ncbi Vibrio cholerae O3957
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169617
TTUR377629 ncbi Teredinibacter turnerae T79017
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252597
TCRU317025 ncbi Thiomicrospira crunogena XCL-26
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT27
SSP94122 ncbi Shewanella sp. ANA-37
SSON300269 ncbi Shigella sonnei Ss0467
SSED425104 ncbi Shewanella sediminis HAW-EB37
SPRO399741 ncbi Serratia proteamaculans 5687
SPEA398579 ncbi Shewanella pealeana ATCC 7003457
SONE211586 ncbi Shewanella oneidensis MR-17
SLOI323850 ncbi Shewanella loihica PV-47
SHIGELLA ncbi Shigella flexneri 2a str. 2457T7
SHAL458817 ncbi Shewanella halifaxensis HAW-EB47
SGLO343509 ncbi Sodalis glossinidius morsitans7
SFLE373384 ncbi Shigella flexneri 5 str. 84017
SFLE198214 ncbi Shigella flexneri 2a str. 3017
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4767
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B677
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91507
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT187
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty27
SDYS300267 ncbi Shigella dysenteriae Sd1977
SDEN318161 ncbi Shewanella denitrificans OS2177
SDEG203122 ncbi Saccharophagus degradans 2-407
SBOY300268 ncbi Shigella boydii Sb2277
SBAL402882 ncbi Shewanella baltica OS1857
SBAL399599 ncbi Shewanella baltica OS1957
RSOL267608 ncbi Ralstonia solanacearum GMI10007
RMET266264 ncbi Ralstonia metallidurans CH347
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H167
REUT264198 ncbi Ralstonia eutropha JMP1347
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30007
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a7
PSTU379731 ncbi Pseudomonas stutzeri A15017
PSP296591 ncbi Polaromonas sp. JS6667
PPUT76869 ncbi Pseudomonas putida GB-17
PPUT351746 ncbi Pseudomonas putida F17
PPUT160488 ncbi Pseudomonas putida KT24407
PPRO298386 ncbi Photobacterium profundum SS97
PNAP365044 ncbi Polaromonas naphthalenivorans CJ26
PMUL272843 ncbi Pasteurella multocida multocida Pm706
PMEN399739 ncbi Pseudomonas mendocina ymp7
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO17
PING357804 ncbi Psychromonas ingrahamii 377
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1257
PFLU220664 ncbi Pseudomonas fluorescens Pf-57
PFLU216595 ncbi Pseudomonas fluorescens SBW257
PFLU205922 ncbi Pseudomonas fluorescens Pf0-17
PENT384676 ncbi Pseudomonas entomophila L487
PATL342610 ncbi Pseudoalteromonas atlantica T6c7
PAER208964 ncbi Pseudomonas aeruginosa PAO17
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA147
NOCE323261 ncbi Nitrosococcus oceani ATCC 197076
NMUL323848 ncbi Nitrosospira multiformis ATCC 251967
NEUT335283 ncbi Nitrosomonas eutropha C917
NEUR228410 ncbi Nitrosomonas europaea ATCC 197187
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E6
MSP400668 ncbi Marinomonas sp. MWYL17
MPET420662 ncbi Methylibium petroleiphilum PM17
MMAR394221 ncbi Maricaulis maris MCS106
MMAG342108 ncbi Magnetospirillum magneticum AMB-16
MFLA265072 ncbi Methylobacillus flagellatus KT7
MCAP243233 ncbi Methylococcus capsulatus Bath7
MAQU351348 ncbi Marinobacter aquaeolei VT87
LPNE400673 ncbi Legionella pneumophila Corby7
LPNE297246 ncbi Legionella pneumophila Paris7
LPNE297245 ncbi Legionella pneumophila Lens7
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 17
LCHO395495 ncbi Leptothrix cholodnii SP-67
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785787
JSP375286 ncbi Janthinobacterium sp. Marseille7
ILOI283942 ncbi Idiomarina loihiensis L2TR7
HSOM228400 ncbi Haemophilus somnus 23366
HSOM205914 ncbi Haemophilus somnus 129PT6
HINF71421 ncbi Haemophilus influenzae Rd KW206
HINF374930 ncbi Haemophilus influenzae PittEE6
HINF281310 ncbi Haemophilus influenzae 86-028NP6
HHAL349124 ncbi Halorhodospira halophila SL17
HCHE349521 ncbi Hahella chejuensis KCTC 23967
HARS204773 ncbi Herminiimonas arsenicoxydans6
ESP42895 Enterobacter sp.7
EFER585054 ncbi Escherichia fergusonii ATCC 354697
ECOO157 ncbi Escherichia coli O157:H7 EDL9337
ECOL83334 Escherichia coli O157:H77
ECOL585397 ncbi Escherichia coli ED1a7
ECOL585057 ncbi Escherichia coli IAI397
ECOL585056 ncbi Escherichia coli UMN0267
ECOL585055 ncbi Escherichia coli 559897
ECOL585035 ncbi Escherichia coli S887
ECOL585034 ncbi Escherichia coli IAI17
ECOL481805 ncbi Escherichia coli ATCC 87397
ECOL469008 ncbi Escherichia coli BL21(DE3)7
ECOL439855 ncbi Escherichia coli SMS-3-57
ECOL413997 ncbi Escherichia coli B str. REL6067
ECOL409438 ncbi Escherichia coli SE117
ECOL405955 ncbi Escherichia coli APEC O17
ECOL364106 ncbi Escherichia coli UTI897
ECOL362663 ncbi Escherichia coli 5367
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31107
ECOL199310 ncbi Escherichia coli CFT0737
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10437
DNOD246195 ncbi Dichelobacter nodosus VCS1703A6
DARO159087 ncbi Dechloromonas aromatica RCB7
CVIO243365 ncbi Chromobacterium violaceum ATCC 124727
CSAL290398 ncbi Chromohalobacter salexigens DSM 30437
CPSY167879 ncbi Colwellia psychrerythraea 34H7
CJAP155077 Cellvibrio japonicus7
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1116
CBUR360115 ncbi Coxiella burnetii RSA 3316
CBUR227377 ncbi Coxiella burnetii RSA 4936
BVIE269482 ncbi Burkholderia vietnamiensis G47
BTHA271848 ncbi Burkholderia thailandensis E2646
BSP36773 Burkholderia sp.7
BPSE320373 ncbi Burkholderia pseudomallei 6686
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962436
BPET94624 Bordetella petrii6
BPER257313 ncbi Bordetella pertussis Tohama I6
BPAR257311 ncbi Bordetella parapertussis 128226
BMAL320389 ncbi Burkholderia mallei NCTC 102476
BMAL320388 ncbi Burkholderia mallei SAVP16
BMAL243160 ncbi Burkholderia mallei ATCC 233446
BCEN331272 ncbi Burkholderia cenocepacia HI24247
BCEN331271 ncbi Burkholderia cenocepacia AU 10547
BBRO257310 ncbi Bordetella bronchiseptica RB506
BAMB398577 ncbi Burkholderia ambifaria MC40-67
BAMB339670 ncbi Burkholderia ambifaria AMMD7
ASP76114 ncbi Aromatoleum aromaticum EbN17
ASP62977 ncbi Acinetobacter sp. ADP16
ASP62928 ncbi Azoarcus sp. BH727
ASP232721 ncbi Acidovorax sp. JS426
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4497
APLE416269 ncbi Actinobacillus pleuropneumoniae L206
AHYD196024 Aeromonas hydrophila dhakensis7
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232707
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-17
ACRY349163 ncbi Acidiphilium cryptum JF-56
ABOR393595 ncbi Alcanivorax borkumensis SK27
ABAU360910 ncbi Bordetella avium 197N6
AAVE397945 ncbi Acidovorax citrulli AAC00-17


Names of the homologs of the genes in the group in each of these orgs
  G7321   G7320   G7319   EG11072   EG10421   EG10420   EG10015   
YPSE349747 YPSIP31758_1188YPSIP31758_1189YPSIP31758_1190YPSIP31758_1193YPSIP31758_1194YPSIP31758_1196YPSIP31758_1185
YPSE273123 YPTB2839YPTB2838YPTB2837YPTB2834YPTB2833YPTB2832YPTB2842
YPES386656 YPDSF_2222YPDSF_2221YPDSF_2220YPDSF_2217YPDSF_2216YPDSF_2215YPDSF_2225
YPES377628 YPN_1261YPN_1262YPN_1263YPN_1266YPN_1267YPN_1268YPN_1258
YPES360102 YPA_2317YPA_2316YPA_2315YPA_2313YPA_2312YPA_2311YPA_2320
YPES349746 YPANGOLA_A0416YPANGOLA_A0415YPANGOLA_A0414YPANGOLA_A0410YPANGOLA_A0409YPANGOLA_A0408YPANGOLA_A0419
YPES214092 YPO2877YPO2876YPO2875YPO2872YPO2871YPO2870YPO2880
YPES187410 Y1355Y1356Y1357Y1361Y1362Y1363Y1352
YENT393305 YE1075YE1076YE1077YE1080YE1081YE1082YE1072
XORY360094 XOOORF_2760XOOORF_2759XOOORF_2758XOOORF_1975XOOORF_2480XOOORF_2479XOOORF_2761
XORY342109 XOO2389XOO2388XOO2387XOO2582XOO2062XOO2063XOO2390
XORY291331 XOO2531XOO2530XOO2529XOO2737XOO2194XOO2195XOO2532
XFAS405440 XFASM12_1776XFASM12_1775XFASM12_2085XFASM12_1589XFASM12_1588XFASM12_1778
XFAS183190 PD_1620PD_1619PD_1901PD_1448PD_1447PD_1622
XFAS160492 XF0464XF0465XF0755XF2430XF2429XF0461
XCAM487884 XCC-B100_2285XCC-B100_2286XCC-B100_2287XCC-B100_1875XCC-B100_1996XCC-B100_1998XCC-B100_2284
XCAM316273 XCAORF_2264XCAORF_2265XCAORF_2266XCAORF_2575XCAORF_2452XCAORF_2451XCAORF_2263
XCAM314565 XC_2199XC_2198XC_2197XC_1812XC_1934XC_1935XC_2200
XCAM190485 XCC1985XCC1986XCC1987XCC2303XCC2184XCC2183XCC1984
XAXO190486 XAC2019XAC2020XAC2021XAC2410XAC2288XAC2287XAC2018
VVUL216895 VV1_0425VV1_0424VV1_0423VV1_0420VV1_0419VV1_0418VV1_0428
VVUL196600 VV0768VV0769VV0770VV0774VV0775VV0776VV0765
VPAR223926 VP0610VP0611VP0612VP0615VP0616VP0617VP0607
VFIS312309 VF0631VF0632VF0633VF0636VF0637VF0638VF0628
VEIS391735 VEIS_0078VEIS_0077VEIS_0076VEIS_4890VEIS_1246VEIS_1245
VCHO345073 VC0395_A0290VC0395_A0291VC0395_A0292VC0395_A0294VC0395_A0296VC0395_A0297VC0395_A0287
VCHO VC0761VC0762VC0763VC0766VC0767VC0768VC0758
TTUR377629 TERTU_2632TERTU_2631TERTU_2630TERTU_2618TERTU_2616TERTU_2615TERTU_2634
TDEN292415 TBD_0596TBD_0597TBD_0598TBD_1511TBD_1752TBD_1751TBD_0593
TCRU317025 TCR_0623TCR_0624TCR_0625TCR_1616TCR_1615TCR_0621
STYP99287 STM2521STM2520STM2519STM2512STM2511STM2510STM2524
SSP94122 SHEWANA3_1231SHEWANA3_1232SHEWANA3_1233SHEWANA3_1234SHEWANA3_1235SHEWANA3_1236SHEWANA3_1228
SSON300269 SSO_2595SSO_2594SSO_2593SSO_2591SSO_2590SSO_2589SSO_2598
SSED425104 SSED_1434SSED_1435SSED_1436SSED_3125SSED_3124SSED_3123SSED_1431
SPRO399741 SPRO_3607SPRO_3606SPRO_3605SPRO_3597SPRO_3596SPRO_3595SPRO_3610
SPEA398579 SPEA_1307SPEA_1308SPEA_1309SPEA_1312SPEA_1313SPEA_1314SPEA_1304
SONE211586 SO_3310SO_3309SO_3308SO_3294SO_3293SO_3292SO_3313
SLOI323850 SHEW_1292SHEW_1293SHEW_1294SHEW_1296SHEW_1297SHEW_1298SHEW_1289
SHIGELLA S2731S2730S2729XSEAGUABGUAAYFGA
SHAL458817 SHAL_1369SHAL_1370SHAL_1371SHAL_1375SHAL_1376SHAL_1377SHAL_1366
SGLO343509 SG1758SG1757SG1756SG1750SG1749SG1748SG1761
SFLE373384 SFV_2560SFV_2559SFV_2558SFV_2556SFV_2555SFV_2554SFV_2563
SFLE198214 AAN44059.1AAN44058.1AAN44057.1AAN44055.1AAN44054.1AAN44053.1AAN44062.1
SENT454169 SEHA_C2778SEHA_C2777SEHA_C2776SEHA_C2768SEHA_C2767SEHA_C2766SEHA_C2782
SENT321314 SCH_2518SCH_2517SCH_2516SCH_2510SCH_2509SCH_2508SCH_2521
SENT295319 SPA0346SPA0347SPA0348SPA0355SPA0356SPA0357SPA0343
SENT220341 STY2766STY2765STY2764STY2753STY2752STY2751STY2769
SENT209261 T0335T0336T0337T0345T0346T0347T0332
SDYS300267 SDY_2709SDY_2708SDY_2707SDY_2705SDY_2704SDY_2703SDY_2712
SDEN318161 SDEN_1258SDEN_1259SDEN_1260SDEN_1268SDEN_1269SDEN_1270SDEN_1255
SDEG203122 SDE_1436SDE_1437SDE_1438SDE_1458SDE_1459SDE_1460SDE_1433
SBOY300268 SBO_2537SBO_2536SBO_2535SBO_2533SBO_2532SBO_2531SBO_2540
SBAL402882 SHEW185_3003SHEW185_3002SHEW185_3001SHEW185_3000SHEW185_2999SHEW185_2998SHEW185_3006
SBAL399599 SBAL195_3146SBAL195_3145SBAL195_3144SBAL195_3143SBAL195_3142SBAL195_3141SBAL195_3149
RSOL267608 RSC1217RSC1218RSC1219RSC2527RSC1429RSC1431RSC1214
RMET266264 RMET_2104RMET_2103RMET_2102RMET_0538RMET_1461RMET_1463RMET_2107
RFER338969 RFER_2305RFER_2304RFER_2303RFER_3152RFER_2288RFER_2287
REUT381666 H16_A2362H16_A2361H16_A2360H16_A0609H16_A2030H16_A2028H16_A2365
REUT264198 REUT_A2084REUT_A2083REUT_A2082REUT_A0596REUT_A1856REUT_A1854REUT_A2087
PSYR223283 PSPTO_1436PSPTO_1437PSPTO_1438PSPTO_1446PSPTO_1449PSPTO_1450PSPTO_1433
PSYR205918 PSYR_1250PSYR_1251PSYR_1252PSYR_1259PSYR_1261PSYR_1262PSYR_1247
PSTU379731 PST_3029PST_3028PST_3027PST_3010PST_3008PST_3007PST_3032
PSP296591 BPRO_2606BPRO_2605BPRO_2604BPRO_2946BPRO_2440BPRO_2441BPRO_2609
PPUT76869 PPUTGB1_0898PPUTGB1_0899PPUTGB1_0900PPUTGB1_1025PPUTGB1_1029PPUTGB1_1030PPUTGB1_0895
PPUT351746 PPUT_0885PPUT_0886PPUT_0887PPUT_1067PPUT_1071PPUT_1072PPUT_0882
PPUT160488 PP_0855PP_0856PP_0857PP_1027PP_1031PP_1032PP_0852
PPRO298386 PBPRA0765PBPRA0766PBPRA0767PBPRA0779PBPRA0780PBPRA0781PBPRA0762
PNAP365044 PNAP_1874PNAP_1875PNAP_1876PNAP_1926PNAP_2001PNAP_2000
PMUL272843 PM2012PM0105PM0168PM0295PM0293PM2009
PMEN399739 PMEN_3498PMEN_3497PMEN_3496PMEN_3490PMEN_3486PMEN_3485PMEN_3501
PLUM243265 PLU1378PLU1379PLU1380PLU2714PLU2713PLU2712PLU1375
PING357804 PING_1170PING_1171PING_1172PING_2951PING_2950PING_2949PING_1167
PHAL326442 PSHAB0136PSHAB0135PSHAB0134PSHAA0647PSHAA0648PSHAA0649PSHAB0139
PFLU220664 PFL_4952PFL_4951PFL_4950PFL_4944PFL_4940PFL_4939PFL_4955
PFLU216595 PFLU5055PFLU5054PFLU5053PFLU5048PFLU5044PFLU5043PFLU5058
PFLU205922 PFL_4599PFL_4598PFL_4597PFL_4592PFL_4588PFL_4587PFL_4602
PENT384676 PSEEN1023PSEEN1024PSEEN1025PSEEN4397PSEEN4393PSEEN4392PSEEN1020
PATL342610 PATL_3124PATL_3123PATL_3122PATL_3121PATL_3120PATL_3119PATL_3127
PAER208964 PA3801PA3800PA3799PA3777PA3770PA3769PA3804
PAER208963 PA14_14900PA14_14910PA14_14930PA14_15230PA14_15310PA14_15340PA14_14860
NOCE323261 NOC_0820NOC_0821NOC_0822NOC_0612NOC_0613NOC_0614
NMUL323848 NMUL_A2375NMUL_A2374NMUL_A2373NMUL_A1030NMUL_A1200NMUL_A1199NMUL_A2378
NEUT335283 NEUT_2166NEUT_2165NEUT_2164NEUT_1510NEUT_2250NEUT_2251NEUT_2169
NEUR228410 NE0151NE0152NE0153NE1172NE0095NE0094NE0147
MSUC221988 MS1921MS0734MS0560MS0774MS0772MS1918
MSP400668 MMWYL1_1358MMWYL1_1359MMWYL1_1360MMWYL1_4149MMWYL1_4148MMWYL1_4147MMWYL1_1355
MPET420662 MPE_A1994MPE_A1993MPE_A1992MPE_A2482MPE_A1620MPE_A1622MPE_A1997
MMAR394221 MMAR10_1202MMAR10_1203MMAR10_0628MMAR10_1175MMAR10_1184MMAR10_2257
MMAG342108 AMB1342AMB1343AMB1344AMB0212AMB3781AMB0732
MFLA265072 MFLA_1616MFLA_1615MFLA_1614MFLA_1863MFLA_1141MFLA_1139MFLA_1621
MCAP243233 MCA_2890MCA_2891MCA_2892MCA_1818MCA_0291MCA_0290MCA_1363
MAQU351348 MAQU_1129MAQU_1130MAQU_1131MAQU_1729MAQU_1728MAQU_1727MAQU_1126
LPNE400673 LPC_0964LPC_0963LPC_0962LPC_2470LPC_1157LPC_1156LPC_0966
LPNE297246 LPP1500LPP1499LPP1498LPP0888LPP1688LPP1687LPP1502
LPNE297245 LPL1483LPL1484LPL1485LPL0857LPL1687LPL1686LPL1481
LPNE272624 LPG1543LPG1542LPG1541LPG0826LPG1723LPG1722LPG1545
LCHO395495 LCHO_2866LCHO_2865LCHO_2864LCHO_2552LCHO_2061LCHO_2063LCHO_2869
KPNE272620 GKPORF_B2176GKPORF_B2175GKPORF_B2174GKPORF_B2172GKPORF_B2170GKPORF_B2169GKPORF_B2179
JSP375286 MMA_2125MMA_2124MMA_2123MMA_2585MMA_2034MMA_2032MMA_2128
ILOI283942 IL2032IL2031IL2030IL2012IL0578IL0579IL2035
HSOM228400 HSM_0731HSM_0290HSM_0347HSM_0745HSM_0746HSM_0728
HSOM205914 HS_0406HS_1325HS_1216HS_0420HS_0421HS_0403
HINF71421 HI_0370HI_0136HI_0397HI_0221HI_0222HI_0367
HINF374930 CGSHIEE_01155CGSHIEE_02605CGSHIEE_01010CGSHIEE_01970CGSHIEE_01965CGSHIEE_01175
HINF281310 NTHI0490NTHI0222NTHI0518NTHI0324NTHI0326NTHI0487
HHAL349124 HHAL_1787HHAL_1786HHAL_0591HHAL_1683HHAL_1682HHAL_1681HHAL_1789
HCHE349521 HCH_04454HCH_04453HCH_04452HCH_04944HCH_04943HCH_04942HCH_04457
HARS204773 HEAR1266HEAR1267HEAR1268HEAR2497HEAR1359HEAR1361
ESP42895 ENT638_3007ENT638_3006ENT638_3005ENT638_3000ENT638_2999ENT638_2998ENT638_3010
EFER585054 EFER_0659EFER_0660EFER_0661EFER_0666EFER_0667EFER_0668EFER_0656
ECOO157 Z3776Z3775Z3774XSEAGUABGUAAYFGA
ECOL83334 ECS3375ECS3374ECS3373ECS3371ECS3370ECS3369ECS3378
ECOL585397 ECED1_2944ECED1_2943ECED1_2942ECED1_2933ECED1_2932ECED1_2931ECED1_2947
ECOL585057 ECIAI39_2714ECIAI39_2713ECIAI39_2712ECIAI39_2707ECIAI39_2706ECIAI39_2705ECIAI39_2717
ECOL585056 ECUMN_2833ECUMN_2832ECUMN_2831ECUMN_2825ECUMN_2824ECUMN_2823ECUMN_2836
ECOL585055 EC55989_2798EC55989_2797EC55989_2796EC55989_2794EC55989_2793EC55989_2792EC55989_2801
ECOL585035 ECS88_2689ECS88_2688ECS88_2687ECS88_2681ECS88_2680ECS88_2679ECS88_2692
ECOL585034 ECIAI1_2565ECIAI1_2564ECIAI1_2563ECIAI1_2561ECIAI1_2560ECIAI1_2559ECIAI1_2568
ECOL481805 ECOLC_1164ECOLC_1165ECOLC_1166ECOLC_1168ECOLC_1169ECOLC_1170ECOLC_1161
ECOL469008 ECBD_1173ECBD_1174ECBD_1175ECBD_1177ECBD_1178ECBD_1179ECBD_1170
ECOL439855 ECSMS35_2665ECSMS35_2664ECSMS35_2663ECSMS35_2658ECSMS35_2657ECSMS35_2656ECSMS35_2668
ECOL413997 ECB_02405ECB_02404ECB_02403ECB_02401ECB_02400ECB_02399ECB_02408
ECOL409438 ECSE_2799ECSE_2798ECSE_2797ECSE_2795ECSE_2794ECSE_2793ECSE_2802
ECOL405955 APECO1_4011APECO1_4012APECO1_4013APECO1_4017APECO1_4018APECO1_4019APECO1_4008
ECOL364106 UTI89_C2834UTI89_C2833UTI89_C2832UTI89_C2827UTI89_C2826UTI89_C2825UTI89_C2837
ECOL362663 ECP_2518ECP_2517ECP_2516ECP_2511ECP_2510ECP_2509ECP_2521
ECOL331111 ECE24377A_2797ECE24377A_2796ECE24377A_2795ECE24377A_2792ECE24377A_2791ECE24377A_2800
ECOL316407 ECK2509:JW2497:B2513ECK2508:JW2496:B2512ECK2507:JW5403:B2511ECK2505:JW2493:B2509ECK2504:JW5401:B2508ECK2503:JW2491:B2507ECK2512:JW2500:B2516
ECOL199310 C3035C3034C3033C3028C3027C3026C3038
ECAR218491 ECA3218ECA3217ECA3216ECA3210ECA3209ECA3208ECA3221
DNOD246195 DNO_0518DNO_0519DNO_0520DNO_0376DNO_0380DNO_0516
DARO159087 DARO_2983DARO_2982DARO_2981DARO_3211DARO_2338DARO_2337DARO_2986
CVIO243365 CV_3536CV_3535CV_3534CV_3564CV_1303CV_3465CV_3539
CSAL290398 CSAL_2856CSAL_2857CSAL_2858CSAL_0718CSAL_0730CSAL_0731CSAL_2853
CPSY167879 CPS_4250CPS_4249CPS_4247CPS_4244CPS_4242CPS_4241CPS_4253
CJAP155077 CJA_1483CJA_1484CJA_1485CJA_2105CJA_2104CJA_2103CJA_1480
CBUR434922 COXBU7E912_1331COXBU7E912_1329COXBU7E912_1327COXBU7E912_1431COXBU7E912_1430COXBU7E912_1333
CBUR360115 COXBURSA331_A1392COXBURSA331_A1390COXBURSA331_A1386COXBURSA331_A1495COXBURSA331_A1494COXBURSA331_A1394
CBUR227377 CBU_1247CBU_1245CBU_1243CBU_1342CBU_1341CBU_1249
BVIE269482 BCEP1808_1737BCEP1808_1736BCEP1808_1735BCEP1808_2637BCEP1808_1897BCEP1808_1895BCEP1808_1740
BTHA271848 BTH_I2236BTH_I2237BTH_I2238BTH_I0743BTH_I2056BTH_I2058
BSP36773 BCEP18194_A5111BCEP18194_A5110BCEP18194_A5109BCEP18194_A5875BCEP18194_A5301BCEP18194_A5299BCEP18194_A5114
BPSE320373 BURPS668_2188BURPS668_2187BURPS668_2185BURPS668_0929BURPS668_2405BURPS668_2402
BPSE320372 BURPS1710B_A2555BURPS1710B_A2554BURPS1710B_A2552BURPS1710B_A1143BURPS1710B_A2773BURPS1710B_A2770
BPSE272560 BPSL1515BPSL1516BPSL1517BPSL0879BPSL2129BPSL2127
BPET94624 BPET2021BPET2022BPET2023BPET2668BPET2084BPET2085
BPER257313 BP2197BP2196BP2195BP2762BP2625BP2624
BPAR257311 BPP2853BPP2852BPP2851BPP2566BPP1258BPP1259
BMAL320389 BMA10247_1105BMA10247_1104BMA10247_1102BMA10247_2149BMA10247_1295BMA10247_1292
BMAL320388 BMASAVP1_A1833BMASAVP1_A1832BMASAVP1_A1830BMASAVP1_A0567BMASAVP1_A2024BMASAVP1_A2021
BMAL243160 BMA_1343BMA_1342BMA_1341BMA_2272BMA_1524BMA_1522
BCEN331272 BCEN2424_1810BCEN2424_1809BCEN2424_1808BCEN2424_2544BCEN2424_1991BCEN2424_1989BCEN2424_1813
BCEN331271 BCEN_6269BCEN_6270BCEN_6271BCEN_1932BCEN_6086BCEN_6088BCEN_6266
BBRO257310 BB3174BB3173BB3172BB2011BB2326BB2327
BAMB398577 BAMMC406_1721BAMMC406_1720BAMMC406_1719BAMMC406_2462BAMMC406_1893BAMMC406_1891BAMMC406_1724
BAMB339670 BAMB_1748BAMB_1747BAMB_1746BAMB_2592BAMB_2024BAMB_2022BAMB_1751
ASP76114 EBA1259EBA1258EBA1256EBA5078EBA6647EBA6645EBA1262
ASP62977 ACIAD0563ACIAD0564ACIAD0565ACIAD3503ACIAD0151ACIAD0560
ASP62928 AZO0929AZO0930AZO0931AZO1467AZO1580AZO1581AZO0926
ASP232721 AJS_1172AJS_1173AJS_1174AJS_2302AJS_2548AJS_2547
ASAL382245 ASA_2597ASA_2596ASA_2595ASA_1863ASA_1868ASA_1869ASA_2600
APLE416269 APL_1174APL_0403APL_0817APL_0593APL_0592APL_1177
AHYD196024 AHA_1761AHA_1762AHA_1763AHA_1983AHA_1989AHA_1990AHA_1758
AFER243159 AFE_1155AFE_1154AFE_1153AFE_1112AFE_1308AFE_1307AFE_1158
AEHR187272 MLG_1253MLG_1254MLG_0596MLG_0693MLG_1014MLG_1016MLG_1251
ACRY349163 ACRY_0751ACRY_0750ACRY_1331ACRY_1194ACRY_0899ACRY_1011
ABOR393595 ABO_1858ABO_1857ABO_1856ABO_1852ABO_1851ABO_1850ABO_1861
ABAU360910 BAV2342BAV2341BAV2340BAV2097BAV1567BAV1568
AAVE397945 AAVE_1426AAVE_1427AAVE_1428AAVE_2567AAVE_3370AAVE_3367AAVE_1423


Organism features enriched in list (features available for 162 out of the 169 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00005331192
Arrangment:Singles 0.003242993286
Disease:Bubonic_plague 0.000430166
Disease:Dysentery 0.000430166
Disease:Gastroenteritis 0.00025291013
Disease:Legionnaire's_disease 0.005803144
Endospores:No 7.530e-832211
GC_Content_Range4:0-40 9.698e-2411213
GC_Content_Range4:40-60 4.190e-1095224
GC_Content_Range4:60-100 0.000365156145
GC_Content_Range7:30-40 4.439e-1511166
GC_Content_Range7:50-60 1.762e-854107
GC_Content_Range7:60-70 0.000026556134
Genome_Size_Range5:0-2 1.514e-204155
Genome_Size_Range5:2-4 0.000034635197
Genome_Size_Range5:4-6 1.819e-21100184
Genome_Size_Range5:6-10 0.00070482347
Genome_Size_Range9:1-2 1.080e-154128
Genome_Size_Range9:2-3 0.000305419120
Genome_Size_Range9:4-5 6.585e-84996
Genome_Size_Range9:5-6 6.314e-115188
Genome_Size_Range9:6-8 0.00004082238
Gram_Stain:Gram_Neg 9.237e-31150333
Habitat:Specialized 0.0017312653
Motility:No 6.849e-1212151
Motility:Yes 3.187e-13113267
Optimal_temp.:35-37 0.0084206813
Oxygen_Req:Anaerobic 1.908e-114102
Oxygen_Req:Facultative 4.571e-1088201
Pathogenic_in:Animal 0.00266492866
Pathogenic_in:No 0.000055043226
Pathogenic_in:Plant 0.00023651115
Shape:Coccus 2.007e-9382
Shape:Rod 1.293e-15137347
Shape:Spiral 0.0044865334
Temp._range:Mesophilic 0.0001629146473
Temp._range:Thermophilic 0.0001092135



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 166
Effective number of orgs (counting one per cluster within 468 clusters): 140

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX1
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 71
SSOL273057 ncbi Sulfolobus solfataricus P20
SMAR399550 ncbi Staphylothermus marinus F10
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SCO ncbi Streptomyces coelicolor A3(2)1
SAVE227882 ncbi Streptomyces avermitilis MA-46801
SARE391037 ncbi Salinispora arenicola CNS-2050
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99411
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSP101510 ncbi Rhodococcus jostii RHA11
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa1
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
RMAS416276 ncbi Rickettsia massiliae MTU51
RFEL315456 ncbi Rickettsia felis URRWXCal21
RCON272944 ncbi Rickettsia conorii Malish 71
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RBEL336407 ncbi Rickettsia bellii RML369-C1
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97901
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong1
NSP35761 Nocardioides sp.0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NFAR247156 ncbi Nocardia farcinica IFM 101520
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H1
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30911
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR368407 ncbi Methanoculleus marisnigri JR11
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8431
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74211
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI31
FALN326424 ncbi Frankia alni ACN14a0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEI306537 ncbi Corynebacterium jeikeium K4110
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4001
BTUR314724 ncbi Borrelia turicatae 91E1350
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B310
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  G7321   G7320   G7319   EG11072   EG10421   EG10420   EG10015   
UURE95667
UURE95664
UPAR505682
UMET351160 LRC556
TWHI218496
TWHI203267
TVOL273116
TPET390874 TPET_1436
TPEN368408
TPAL243276
TLET416591
TKOD69014
TFUS269800 TFU_1210
TDEN243275 TDE_1017
TACI273075
STRO369723
STOK273063 ST2402
SSOL273057
SMAR399550
SERY405948
SCO SCO5751
SAVE227882 SAV2509
SARE391037
SACI330779
RXYL266117 RXYL_0816
RTYP257363
RSP101510 RHA1_RO06199
RSAL288705
RRIC452659 RRIOWA_1225
RRIC392021 A1G_05685
RPRO272947 RP232
RMAS416276 RMA_1064
RFEL315456 RF_0248
RCON272944 RC1030
RBEL391896 A1I_06755
RBEL336407 RBE_0212
RALB246199 GRAORF_2461
RAKA293614 A1C_05240
PTOR263820 PTO1018
PMOB403833
PMAR93060
PMAR74547 PMT0203
PMAR74546 PMT9312_0037
PMAR167546 P9301ORF_0037
PMAR167542 P9515ORF_0037
PMAR167540 PMM0037
PMAR146891
PISL384616
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844
OTSU357244 OTBS_1915
NSP35761
NSEN222891 NSE_0525
NPHA348780 NP4750A
NFAR247156
MVAN350058
MTUB419947
MTUB336982
MTHE187420 MTH1485
MTBRV
MTBCDC
MSYN262723
MSTA339860 MSP_0197
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632 MSC_0101
MMOB267748
MMAZ192952
MMAR444158 MMARC6_0154
MMAR402880 MMARC5_0850
MMAR368407 MEMAR_1979
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MCAP340047 MCAP_0057
MBUR259564 MBUR_1515
MBOV410289
MBOV233413
MBAR269797 MBAR_A2782
MAVI243243
MART243272
MAER449447 MAE_00810
MAEO419665
MACE188937 MA0850
MABS561007
LXYL281090
LINT363253
LINT267671 LIC_11591
LINT189518 LA2356
LBOR355277 LBJ_1274
LBOR355276 LBL_1499
LBIF456481 LEPBI_I1860
LBIF355278 LBF_1805
KRAD266940
IHOS453591
HWAL362976 HQ3060A
HSP64091 VNG6297C
HSAL478009 OE6278R
HPYL85963 JHP0768
HPYL357544 HPAG1_0815
HPY HP0829
HMUK485914 HMUK_0677
HMAR272569 RRNAC3198
HBUT415426
HACI382638
GVIO251221 GLL3210
FSUC59374
FSP1855
FSP106370 FRANCCI3_1990
FALN326424
CTRA471473 CTLON_0579
CTRA471472 CTL0583
CSUL444179
CPRO264201 PC0621
CPNE182082 CPB1105
CPNE138677 CPJ1062
CPNE115713 CPN1062
CPNE115711 CP_0787
CPEL335992
CMUR243161 TC_0605
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CJEI306537
CGLU196627 CG0699
CEFF196164
CDIP257309
CABO218497 CAB304
BXEN266265 BXE_B2415
BTUR314724
BLON206672
BHER314723
BGAR290434
BBUR224326
BAPH372461 BCC_397
BAFZ390236
AYEL322098
AURANTIMONAS
ASP1667
APER272557
ANAE240017
ALAI441768 ACL_0476
AFUL224325 AF_1399
ACEL351607
AAUR290340


Organism features enriched in list (features available for 156 out of the 166 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 2.204e-9492
Arrangment:Pairs 0.000011713112
Disease:Leptospirosis 0.004982844
Disease:Pharyngitis 0.005237068
Disease:bronchitis_and_pneumonitis 0.005237068
Endospores:No 4.099e-1394211
GC_Content_Range4:40-60 0.002030446224
GC_Content_Range7:0-30 0.00012922447
GC_Content_Range7:50-60 0.000686916107
GC_Content_Range7:70-100 0.00001241011
Genome_Size_Range5:0-2 5.981e-1478155
Genome_Size_Range5:4-6 7.361e-824184
Genome_Size_Range9:0-1 1.642e-92227
Genome_Size_Range9:1-2 1.070e-656128
Genome_Size_Range9:4-5 0.00040321396
Genome_Size_Range9:5-6 0.00029611188
Gram_Stain:Gram_Neg 8.484e-1057333
Habitat:Host-associated 0.001203670206
Habitat:Multiple 3.245e-822178
Habitat:Specialized 0.00271632353
Motility:No 8.349e-661151
Motility:Yes 0.000043351267
Optimal_temp.:- 0.002559455257
Optimal_temp.:37 0.000528842106
Optimal_temp.:85 0.004982844
Oxygen_Req:Aerobic 0.005740061185
Oxygen_Req:Facultative 2.384e-925201
Shape:Branched_filament 0.004982844
Shape:Irregular_coccus 0.00001841317
Shape:Rod 8.943e-963347
Shape:Sphere 1.584e-71619
Shape:Spiral 0.00169431734
Temp._range:Hyperthermophilic 1.647e-81923
Temp._range:Mesophilic 0.0012523114473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181490.6802
AST-PWY (arginine degradation II (AST pathway))1201040.6541
GLYCOCAT-PWY (glycogen degradation I)2461540.6445
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001650.6042
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951290.5925
PWY-5918 (heme biosynthesis I)2721550.5912
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251380.5785
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861570.5754
PWY-1269 (CMP-KDO biosynthesis I)3251660.5625
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761170.5554
PWY-4041 (γ-glutamyl cycle)2791520.5541
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911220.5496
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901540.5452
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911540.5431
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961550.5401
GLUCONSUPER-PWY (D-gluconate degradation)2291320.5232
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391640.5222
PWY-5386 (methylglyoxal degradation I)3051550.5219
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481660.5206
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81700.5155
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491010.5127
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491360.5045
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491360.5045
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831130.5022
PWY-5913 (TCA cycle variation IV)3011510.5010
PWY-5148 (acyl-CoA hydrolysis)2271270.4908
GALACTITOLCAT-PWY (galactitol degradation)73630.4849
TYRFUMCAT-PWY (tyrosine degradation I)1841110.4834
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911130.4791
PWY0-981 (taurine degradation IV)106780.4731
GLUCARDEG-PWY (D-glucarate degradation I)152960.4604
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291520.4538
LIPASYN-PWY (phospholipases)2121170.4533
PWY0-1182 (trehalose degradation II (trehalase))70580.4460
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94690.4388
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551280.4319
DAPLYSINESYN-PWY (lysine biosynthesis I)3421520.4297
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96690.4296
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001400.4235
PWY-6196 (serine racemization)102710.4228
PWY-6134 (tyrosine biosynthesis IV)89650.4215
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3981640.4212
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112750.4195
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)135840.4152
PWY-561 (superpathway of glyoxylate cycle)162940.4120
KDOSYN-PWY (KDO transfer to lipid IVA I)1801000.4076
GLYOXYLATE-BYPASS (glyoxylate cycle)169960.4073
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)156910.4057
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4221670.4056
GALACTARDEG-PWY (D-galactarate degradation I)151890.4047
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)179990.4024
LPSSYN-PWY (superpathway of lipopolysaccharide biosynthesis)91640.4019



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7320   G7319   EG11072   EG10421   EG10420   EG10015   
G73210.999860.9997940.9990370.9990160.9990160.999741
G73200.9998960.9989440.9990090.9990680.999689
G73190.9990040.9989840.9987420.999636
EG110720.9991550.9991060.998943
EG104210.9999210.998885
EG104200.998893
EG10015



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PAIRWISE BLAST SCORES:

  G7321   G7320   G7319   EG11072   EG10421   EG10420   EG10015   
G73210.0f0------
G7320-0.0f0-----
G7319--0.0f0----
EG11072---0.0f0---
EG10421----0.0f0--
EG10420-----0.0f0-
EG10015------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I) (degree of match pw to cand: 0.059, degree of match cand to pw: 0.286, average score: 0.570)
  Genes in pathway or complex:
             0.7168 0.3258 EG11809 (purT) GARTRANSFORMYL2-MONOMER (phosphoribosylglycinamide formyltransferase 2)
             0.9770 0.9032 EG10798 (purM) AIRS-MONOMER (PurM)
             0.9978 0.9961 EG10797 (purL) FGAMSYN-MONOMER (phosphoribosylformylglycinamide synthetase)
             0.5380 0.0965 EG10792 (purD) GLYCRIBONUCSYN-MONOMER (phosphoribosylamine-glycine ligase)
             0.9340 0.6258 EG10794 (purF) PRPPAMIDOTRANS-MONOMER (PurF)
             0.3302 0.0027 EG10796 (purK) PURK-MONOMER (N5-carboxyaminoimidazole ribonucleotide synthetase monomer)
             0.3909 0.0567 EG10793 (purE) PURE-MONOMER (PurE)
             0.2014 0.0024 EG10795 (purH) AICARTRANSIMPCYCLO-CPLX (AICAR transformylase / IMP cyclohydrolase)
             0.9715 0.9255 EG10791 (purC) SAICARSYN-MONOMER (PurC)
             0.5332 0.0602 EG10965 (gmk) GUANYL-KIN-MONOMER (Gmk)
   *in cand* 0.9992 0.9987 EG10420 (guaA) GMP-SYN-MONOMER (GMP synthetase)
   *in cand* 0.9993 0.9989 EG10421 (guaB) IMP-DEHYDROG-MONOMER (GuaB)
             0.0148 0.0014 EG10100 (atpC) ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
             0.0210 0.0014 EG10105 (atpH) ATPH-MONOMER (ATP synthase, F1 complex, δ subunit)
             0.0213 0.0015 EG10098 (atpA) ATPA-MONOMER (ATP synthase, F1 complex, α subunit)
             0.0257 0.0007 EG10104 (atpG) ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)
             0.0231 0.0018 EG10101 (atpD) ATPD-MONOMER (ATP synthase, F1 complex, β subunit)
             0.0375 0.0266 EG10102 (atpE) ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
             0.0415 0.0001 EG10103 (atpF) ATPF-MONOMER (ATP synthase, F0 complex, b subunit)
             0.0485 0.0004 EG10099 (atpB) ATPB-MONOMER (ATP synthase, F0 complex, a subunit)
             0.9990 0.9981 EG10650 (ndk) NUCLEOSIDE-DIP-KIN-MONOMER (Ndk)
             0.9098 0.7357 EG12381 (nrdF) NRDF-MONOMER (NrdF)
             0.8660 0.7574 EG20257 (nrdE) NRDE-MONOMER (NrdE)
             0.2402 0.0039 EG11417 (nrdD) RIBONUCLEOSIDE-TRIP-REDUCT-MONOMER (ribonucleoside-triphosphate reductase)
             0.7012 0.4825 EG10661 (nrdB) NRDB-MONOMER (NrdB)
             0.7227 0.5890 EG10660 (nrdA) NRDA-MONOMER (NrdA)
             0.8383 0.2948 EG10032 (adk) ADENYL-KIN-MONOMER (adenylate kinase)
             0.6421 0.3936 EG11314 (purB) ASL-MONOMER (5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole lyase [multifunctional])
             0.7816 0.1818 EG10790 (purA) ADENYLOSUCCINATE-SYN-MONOMER (PurA)
             0.9781 0.9615 G7401 (nrdH) G7401-MONOMER (glutaredoxin-like protein)
             0.4074 0.1978 EG10318 (fldA) OX-FLAVODOXIN1 (oxidized flavodoxin 1)
             0.8476 0.7337 EG12697 (fldB) OX-FLAVODOXIN2 (oxidized flavodoxin 2)
             0.5864 0.0584 EG11031 (trxA) OX-THIOREDOXIN-MONOMER (oxidized thioredoxin)
             0.7962 0.3910 EG11887 (trxC) OX-THIOREDOXIN2-MONOMER (oxidized thioredoxin 2)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9989 EG10015 (rodZ) EG10015-MONOMER (rod shape-determining membrane protein)
   *in cand* 0.9992 0.9989 EG11072 (xseA) EG11072-MONOMER (exonuclease VII, large subunit)
   *in cand* 0.9994 0.9987 G7319 (der) G7319-MONOMER (50S ribosomal subunit stability factor)
   *in cand* 0.9995 0.9989 G7320 (bamB) G7320-MONOMER (BamB)
   *in cand* 0.9995 0.9990 G7321 (yfgM) G7321-MONOMER (conserved protein)

- PWY-6125 (guanosine nucleotides de novo biosynthesis) (degree of match pw to cand: 0.143, degree of match cand to pw: 0.286, average score: 0.689)
  Genes in pathway or complex:
   *in cand* 0.9993 0.9989 EG10421 (guaB) IMP-DEHYDROG-MONOMER (GuaB)
   *in cand* 0.9992 0.9987 EG10420 (guaA) GMP-SYN-MONOMER (GMP synthetase)
             0.5332 0.0602 EG10965 (gmk) GUANYL-KIN-MONOMER (Gmk)
             0.7012 0.4825 EG10661 (nrdB) NRDB-MONOMER (NrdB)
             0.7227 0.5890 EG10660 (nrdA) NRDA-MONOMER (NrdA)
             0.2402 0.0039 EG11417 (nrdD) RIBONUCLEOSIDE-TRIP-REDUCT-MONOMER (ribonucleoside-triphosphate reductase)
             0.9098 0.7357 EG12381 (nrdF) NRDF-MONOMER (NrdF)
             0.8660 0.7574 EG20257 (nrdE) NRDE-MONOMER (NrdE)
             0.9990 0.9981 EG10650 (ndk) NUCLEOSIDE-DIP-KIN-MONOMER (Ndk)
             0.9781 0.9615 G7401 (nrdH) G7401-MONOMER (glutaredoxin-like protein)
             0.4074 0.1978 EG10318 (fldA) OX-FLAVODOXIN1 (oxidized flavodoxin 1)
             0.8476 0.7337 EG12697 (fldB) OX-FLAVODOXIN2 (oxidized flavodoxin 2)
             0.5864 0.0584 EG11031 (trxA) OX-THIOREDOXIN-MONOMER (oxidized thioredoxin)
             0.7962 0.3910 EG11887 (trxC) OX-THIOREDOXIN2-MONOMER (oxidized thioredoxin 2)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9989 EG10015 (rodZ) EG10015-MONOMER (rod shape-determining membrane protein)
   *in cand* 0.9992 0.9989 EG11072 (xseA) EG11072-MONOMER (exonuclease VII, large subunit)
   *in cand* 0.9994 0.9987 G7319 (der) G7319-MONOMER (50S ribosomal subunit stability factor)
   *in cand* 0.9995 0.9989 G7320 (bamB) G7320-MONOMER (BamB)
   *in cand* 0.9995 0.9990 G7321 (yfgM) G7321-MONOMER (conserved protein)

- PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis) (degree of match pw to cand: 0.036, degree of match cand to pw: 0.286, average score: 0.550)
  Genes in pathway or complex:
             0.4942 0.1415 EG10449 (hisG) ATPPHOSRIBOSTRANS-MONOMER (HisG)
             0.6811 0.3784 EG10451 (hisI) HISTCYCLOPRATPPHOS (phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase)
             0.5703 0.1978 EG10444 (hisA) PRIBFAICARPISOM-MONOMER (N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase)
             0.4837 0.0822 EG10448 (hisF) CYCLASE-MONOMER (imidazole glycerol phosphate synthase, HisF subunit)
             0.6085 0.3830 EG10450 (hisH) GLUTAMIDOTRANS-MONOMER (imidazole glycerol phosphate synthase, HisH subunit)
             0.4631 0.1875 EG10445 (hisB) IMIDPHOSPHADEHYDHISTIDPHOSPHA-MONOMER (HisB)
             0.8233 0.6856 EG10446 (hisC) HISTPHOSTRANS-MONOMER (HisC)
             0.5009 0.1553 EG10447 (hisD) HISTDEHYD-MONOMER (HisD)
             0.7816 0.1818 EG10790 (purA) ADENYLOSUCCINATE-SYN-MONOMER (PurA)
             0.6421 0.3936 EG11314 (purB) ASL-MONOMER (5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole lyase [multifunctional])
             0.8383 0.2948 EG10032 (adk) ADENYL-KIN-MONOMER (adenylate kinase)
             0.7012 0.4825 EG10661 (nrdB) NRDB-MONOMER (NrdB)
             0.7227 0.5890 EG10660 (nrdA) NRDA-MONOMER (NrdA)
             0.2402 0.0039 EG11417 (nrdD) RIBONUCLEOSIDE-TRIP-REDUCT-MONOMER (ribonucleoside-triphosphate reductase)
             0.9098 0.7357 EG12381 (nrdF) NRDF-MONOMER (NrdF)
             0.8660 0.7574 EG20257 (nrdE) NRDE-MONOMER (NrdE)
             0.0148 0.0014 EG10100 (atpC) ATPC-MONOMER (ATP synthase, F1 complex, ε subunit)
             0.0210 0.0014 EG10105 (atpH) ATPH-MONOMER (ATP synthase, F1 complex, δ subunit)
             0.0213 0.0015 EG10098 (atpA) ATPA-MONOMER (ATP synthase, F1 complex, α subunit)
             0.0257 0.0007 EG10104 (atpG) ATPG-MONOMER (ATP synthase, F1 complex, γ subunit)
             0.0231 0.0018 EG10101 (atpD) ATPD-MONOMER (ATP synthase, F1 complex, β subunit)
             0.0375 0.0266 EG10102 (atpE) ATPE-MONOMER (ATP synthase, F0 complex, c subunit)
             0.0415 0.0001 EG10103 (atpF) ATPF-MONOMER (ATP synthase, F0 complex, b subunit)
             0.0485 0.0004 EG10099 (atpB) ATPB-MONOMER (ATP synthase, F0 complex, a subunit)
   *in cand* 0.9993 0.9989 EG10421 (guaB) IMP-DEHYDROG-MONOMER (GuaB)
   *in cand* 0.9992 0.9987 EG10420 (guaA) GMP-SYN-MONOMER (GMP synthetase)
             0.5332 0.0602 EG10965 (gmk) GUANYL-KIN-MONOMER (Gmk)
             0.9715 0.9255 EG10791 (purC) SAICARSYN-MONOMER (PurC)
             0.2014 0.0024 EG10795 (purH) AICARTRANSIMPCYCLO-CPLX (AICAR transformylase / IMP cyclohydrolase)
             0.3909 0.0567 EG10793 (purE) PURE-MONOMER (PurE)
             0.3302 0.0027 EG10796 (purK) PURK-MONOMER (N5-carboxyaminoimidazole ribonucleotide synthetase monomer)
             0.9340 0.6258 EG10794 (purF) PRPPAMIDOTRANS-MONOMER (PurF)
             0.5380 0.0965 EG10792 (purD) GLYCRIBONUCSYN-MONOMER (phosphoribosylamine-glycine ligase)
             0.9978 0.9961 EG10797 (purL) FGAMSYN-MONOMER (phosphoribosylformylglycinamide synthetase)
             0.9770 0.9032 EG10798 (purM) AIRS-MONOMER (PurM)
             0.7168 0.3258 EG11809 (purT) GARTRANSFORMYL2-MONOMER (phosphoribosylglycinamide formyltransferase 2)
             0.8979 0.7915 EG11539 (pyrH) UMPKI-MONOMER (PyrH)
             0.9516 0.8400 EG10810 (pyrG) CTPSYN-MONOMER (PyrG)
             0.9990 0.9981 EG10650 (ndk) NUCLEOSIDE-DIP-KIN-MONOMER (Ndk)
             0.6910 0.1239 EG10134 (carA) CARBPSYN-SMALL (CarA)
             0.6358 0.1752 EG10135 (carB) CARBPSYN-LARGE (CarB)
             0.1766 0.0393 EG10811 (pyrI) ASPCARBREG-MONOMER (aspartate carbamoyltransferase, PyrI subunit)
             0.3281 0.0974 EG10805 (pyrB) ASPCARBCAT-MONOMER (aspartate carbamoyltransferase, PyrB subunit)
             0.4183 0.2047 EG10806 (pyrC) DIHYDROOROT-MONOMER (PyrC)
             0.1262 0.0004 EG10808 (pyrE) OROPRIBTRANS-MONOMER (PyrE)
             0.4418 0.1081 EG10809 (pyrF) OROTPDECARB-MONOMER (PyrF)
             0.5920 0.4349 EG10807 (pyrD) DIHYDROOROTOX-MONOMER (dihydroorotate dehydrogenase)
             0.4257 0.1030 EG10774 (prs) PRPPSYN-MONOMER (ribose-phosphate diphosphokinase)
             0.1370 0.0608 EG10723 (phnN) EG10723-MONOMER (ribose 1,5-bisphosphokinase)
             0.4473 0.0817 EG10220 (deoB) PPENTOMUT-MONOMER (phosphopentomutase)
             0.9781 0.9615 G7401 (nrdH) G7401-MONOMER (glutaredoxin-like protein)
             0.4074 0.1978 EG10318 (fldA) OX-FLAVODOXIN1 (oxidized flavodoxin 1)
             0.8476 0.7337 EG12697 (fldB) OX-FLAVODOXIN2 (oxidized flavodoxin 2)
             0.5864 0.0584 EG11031 (trxA) OX-THIOREDOXIN-MONOMER (oxidized thioredoxin)
             0.7962 0.3910 EG11887 (trxC) OX-THIOREDOXIN2-MONOMER (oxidized thioredoxin 2)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9989 EG10015 (rodZ) EG10015-MONOMER (rod shape-determining membrane protein)
   *in cand* 0.9992 0.9989 EG11072 (xseA) EG11072-MONOMER (exonuclease VII, large subunit)
   *in cand* 0.9994 0.9987 G7319 (der) G7319-MONOMER (50S ribosomal subunit stability factor)
   *in cand* 0.9995 0.9989 G7320 (bamB) G7320-MONOMER (BamB)
   *in cand* 0.9995 0.9990 G7321 (yfgM) G7321-MONOMER (conserved protein)
   This pathway has holes



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10015 EG10420 EG10421 EG11072 G7319 G7320 G7321 (centered at G7319)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7321   G7320   G7319   EG11072   EG10421   EG10420   EG10015   
182/623237/623415/623420/623416/623408/623163/623
AAEO224324:0:Tyes--1190-12670-
AAVE397945:0:Tyes3451126191419110
ABAC204669:0:Tyes---09901523-
ABAU360910:0:Tyes77777677552501-
ABOR393595:0:Tyes87621011
ABUT367737:0:Tyes---0596--
ACAU438753:0:Tyes--1969019741332-
ACRY349163:8:Tyes-10580442148261
ADEH290397:0:Tyes-573571012691268-
AEHR187272:0:Tyes652653097417419650
AFER243159:0:Tyes434241019319246
AFUL224325:0:Tyes-0-----
AHYD196024:0:Tyes3452202262270
ALAI441768:0:Tyes---0---
AMAR234826:0:Tyes-495--0--
AMAR329726:9:Tyes--25660-1076-
AMET293826:0:Tyes--190815550--
AORE350688:0:Tyes--86110720--
APHA212042:0:Tyes-288--0--
APLE416269:0:Tyes770-0413189188773
APLE434271:0:Tno752-0-145143756
ASAL382245:5:Tyes702701700056705
ASP232721:2:Tyes012108113251324-
ASP62928:0:Tyes3455636766770
ASP62977:0:Tyes377378379-31120374
ASP76114:2:Tyes2102244317031695
AVAR240292:3:Tyes--1846--0-
BABO262698:0:Tno---0337328-
BABO262698:1:Tno--0----
BAMB339670:3:Tno2108722822805
BAMB398577:3:Tno2107601741725
BAMY326423:0:Tyes--208422460661-
BANT260799:0:Tno--147441240278-
BANT261594:2:Tno--140140440241-
BANT568206:2:Tyes--296342700249-
BANT592021:2:Tno--146042600250-
BAPH198804:0:Tyes1-0----
BAPH372461:0:Tyes0------
BBAC264462:0:Tyes-1696-0---
BBAC360095:0:Tyes---65103-
BBRO257310:0:Tyes1159115811570316317-
BCAN483179:0:Tno---40209-
BCAN483179:1:Tno--0----
BCEN331271:0:Tno186187188-02183
BCEN331271:2:Tno---0---
BCEN331272:3:Tyes2107351831815
BCER226900:1:Tyes--147040810280-
BCER288681:0:Tno--145439830269-
BCER315749:1:Tyes--116527220235-
BCER405917:1:Tyes--154340180275-
BCER572264:1:Tno--140240970246-
BCIC186490:0:Tyes-01-588587-
BCLA66692:0:Tyes--192225130965-
BFRA272559:1:Tyes-26292952-29410-
BFRA295405:0:Tno-28453162-31500-
BHAL272558:0:Tyes--169728440638-
BHEN283166:0:Tyes---97202-
BJAP224911:0:Fyes-2268803561017-
BLIC279010:0:Tyes--234625160656-
BMAL243160:1:Tno210826164162-
BMAL320388:1:Tno123912381236014261423-
BMAL320389:1:Tyes3201020189186-
BMEL224914:0:Tno---0373--
BMEL224914:1:Tno--0----
BMEL359391:0:Tno---0340331-
BMEL359391:1:Tno--0----
BOVI236:0:Tyes---33007-
BOVI236:1:Tyes--0----
BPAR257311:0:Tno151015091508124901-
BPER257313:0:Tyes210531414413-
BPET94624:0:Tyes0126476566-
BPSE272560:1:Tyes648649650012531251-
BPSE320372:1:Tno139413931391015291526-
BPSE320373:1:Tno121812171216014271424-
BPUM315750:0:Tyes--15161662050-
BQUI283165:0:Tyes--12470802-
BSP107806:2:Tyes1-0----
BSP36773:2:Tyes2107871961945
BSP376:0:Tyes-692-279104-
BSUB:0:Tyes--244425940704-
BSUI204722:0:Tyes---39309-
BSUI204722:1:Tyes--0----
BSUI470137:0:Tno---37009-
BSUI470137:1:Tno--0----
BTHA271848:1:Tno146114621463012831285-
BTHE226186:0:Tyes--0-9435-
BTHU281309:1:Tno--135238730226-
BTHU412694:1:Tno--134536580266-
BTRI382640:1:Tyes---145702-
BVIE269482:7:Tyes2108901611595
BWEI315730:4:Tyes--151040290290-
BXEN266265:1:Tyes-0-----
CABO218497:0:Tyes---0---
CACE272562:1:Tyes--0364999--
CAULO:0:Tyes-363763503-
CBEI290402:0:Tyes--797135601-
CBLO203907:0:Tyes--3-10-
CBLO291272:0:Tno--3-10-
CBOT36826:1:Tno--638014071406-
CBOT441770:0:Tyes--558014741473-
CBOT441771:0:Tno--529013351334-
CBOT441772:1:Tno--611014381437-
CBOT498213:1:Tno--628014841483-
CBOT508765:1:Tyes--77519650--
CBOT515621:2:Tyes--669014511450-
CBOT536232:0:Tno--703015541553-
CBUR227377:1:Tyes4-2093926
CBUR360115:1:Tno6-401041038
CBUR434922:2:Tno4-201021016
CCAV227941:1:Tyes---0-261-
CCHL340177:0:Tyes---0175--
CCON360104:2:Tyes---01121--
CCUR360105:0:Tyes---11620--
CDES477974:0:Tyes--154051625-
CDIF272563:1:Tyes--24801031-0-
CFEL264202:1:Tyes---274-0-
CFET360106:0:Tyes----0648-
CGLU196627:0:Tyes----0--
CHOM360107:1:Tyes---3820--
CHUT269798:0:Tyes----0725-
CHYD246194:0:Tyes--8268971070-
CJAP155077:0:Tyes3456066056040
CJEJ192222:0:Tyes---0721909-
CJEJ195099:0:Tno---0802983-
CJEJ354242:2:Tyes---0696881-
CJEJ360109:0:Tyes---10831810-
CJEJ407148:0:Tno---0727920-
CKLU431943:1:Tyes--87975101-
CMUR243161:1:Tyes---0---
CNOV386415:0:Tyes--2740878877-
CPER195102:1:Tyes--067565564-
CPER195103:0:Tno--064507506-
CPER289380:3:Tyes--064496495-
CPHY357809:0:Tyes--0124891--
CPNE115711:1:Tyes---0---
CPNE115713:0:Tno---0---
CPNE138677:0:Tno---0---
CPNE182082:0:Tno---0---
CPRO264201:0:Fyes---0---
CPSY167879:0:Tyes98631012
CRUT413404:0:Tyes--2032650422-
CSAL290398:0:Tyes217621772178012132173
CSP501479:8:Fyes-42042201074891-
CSP78:2:Tyes-127712780994997-
CTEP194439:0:Tyes--1584--0-
CTET212717:0:Tyes--041311671166-
CTRA471472:0:Tyes---0---
CTRA471473:0:Tno---0---
CVES412965:0:Tyes--1872610380-
CVIO243365:0:Tyes2294229322922326022142297
DARO159087:0:Tyes65165064987910654
DDES207559:0:Tyes---74810-
DETH243164:0:Tyes-194540--0-
DGEO319795:1:Tyes-976--0--
DHAF138119:0:Tyes--0102-1695-
DNOD246195:0:Tyes138139140-04136
DOLE96561:0:Tyes--11726979210-
DPSY177439:2:Tyes---107601-
DRAD243230:3:Tyes-0--108--
DRED349161:0:Tyes--8708341305-
DSHI398580:5:Tyes-152601581485425-
DSP216389:0:Tyes-176459--0-
DSP255470:0:Tno-173454--0-
DVUL882:1:Tyes---30110-
ECAN269484:0:Tyes-505-0---
ECAR218491:0:Tyes109821013
ECHA205920:0:Tyes-4364320---
ECOL199310:0:Tno98721012
ECOL316407:0:Tno6542109
ECOL331111:6:Tno543-108
ECOL362663:0:Tno98721012
ECOL364106:1:Tno98721012
ECOL405955:2:Tyes87621011
ECOL409438:6:Tyes6542109
ECOL413997:0:Tno6542109
ECOL439855:4:Tno98721012
ECOL469008:0:Tno3457890
ECOL481805:0:Tno3457890
ECOL585034:0:Tno65421010
ECOL585035:0:Tno87621012
ECOL585055:0:Tno65421010
ECOL585056:2:Tno87621011
ECOL585057:0:Tno98721013
ECOL585397:0:Tno1110921015
ECOL83334:0:Tno6542109
ECOLI:0:Tno65421010
ECOO157:0:Tno5432108
EFAE226185:3:Tyes--130475129310-
EFER585054:1:Tyes3451011120
ELIT314225:0:Tyes-3660236012232157-
ERUM254945:0:Tyes-542-0---
ERUM302409:0:Tno-5325340---
ESP42895:1:Tyes98721012
FJOH376686:0:Tyes-065--574-
FMAG334413:1:Tyes--57956705-
FNOD381764:0:Tyes----0104-
FNUC190304:0:Tyes--089610611274-
FPHI484022:1:Tyes939938238-01607-
FRANT:0:Tno101061-1072795-
FSP106370:0:Tyes-0-----
FTUL351581:0:Tno115711580-937579-
FTUL393011:0:Tno103610370-842532-
FTUL393115:0:Tyes101044-1054785-
FTUL401614:0:Tyes109310940-214448-
FTUL418136:0:Tno10422-1020579-
FTUL458234:0:Tno107410750-874556-
GBET391165:0:Tyes-11471148-03-
GFOR411154:0:Tyes----2820-
GKAU235909:1:Tyes--230324770288-
GMET269799:1:Tyes--4740453452-
GOXY290633:5:Tyes-2402410536221-
GSUL243231:0:Tyes--4570427426-
GTHE420246:1:Tyes--2110-0219-
GURA351605:0:Tyes--1252012271226-
GVIO251221:0:Tyes--0----
HARS204773:0:Tyes01211589092-
HAUR316274:2:Tyes-28512375355102285-
HCHE349521:0:Tyes2104914904895
HDUC233412:0:Tyes3-123-3913920
HHAL349124:0:Tyes1208120701101110010991210
HHEP235279:0:Tyes---10480--
HINF281310:0:Tyes239-02688990236
HINF374930:0:Tyes25-274017317229
HINF71421:0:Tno222-02508486219
HMAR272569:8:Tyes-0-----
HMOD498761:0:Tyes--191443423610-
HMUK485914:1:Tyes-0-----
HNEP81032:0:Tyes-0114610131017-
HPY:0:Tno----0--
HPYL357544:1:Tyes----0--
HPYL85963:0:Tno----0--
HSAL478009:2:Tyes-0-----
HSOM205914:1:Tyes3-92481517180
HSOM228400:0:Tno446-056460461443
HSP64091:1:Tno-0-----
HWAL362976:1:Tyes-0-----
ILOI283942:0:Tyes1495149414931475011498
JSP290400:1:Tyes-21918913390241-
JSP375286:0:Tyes9594935602098
KPNE272620:2:Tyes76521010
LACI272621:0:Tyes--7291067-0-
LBIF355278:2:Tyes---0---
LBIF456481:2:Tno---0---
LBOR355276:1:Tyes---0---
LBOR355277:1:Tno---0---
LBRE387344:2:Tyes--0190-907-
LCAS321967:1:Tyes--1123137901716-
LCHO395495:0:Tyes81581481349702818
LDEL321956:0:Tyes--468923-0-
LDEL390333:0:Tyes--462857-0-
LGAS324831:0:Tyes--642503-0-
LHEL405566:0:Tyes--676959-0-
LINN272626:1:Tno--99631718720-
LINT189518:1:Tyes---0---
LINT267671:1:Tno---0---
LJOH257314:0:Tyes--7201126-0-
LLAC272622:5:Tyes--54065401270-
LLAC272623:0:Tyes--53563401266-
LMES203120:1:Tyes--0308---
LMON169963:0:Tno--86926617210-
LMON265669:0:Tyes--85026716250-
LPLA220668:0:Tyes--819586-01200
LPNE272624:0:Tno7167157140896895718
LPNE297245:1:Fno6206216220817816618
LPNE297246:1:Fyes6136126110797796615
LPNE400673:0:Tno21014771891884
LREU557436:0:Tyes--0425-866-
LSAK314315:0:Tyes--9175801420-
LSPH444177:1:Tyes---34070188-
LWEL386043:0:Tyes--89230516340-
MACE188937:0:Tyes-0-----
MAER449447:0:Tyes--0----
MAQU351348:2:Tyes3455955945930
MBAR269797:1:Tyes-0-----
MBUR259564:0:Tyes---0---
MCAP243233:0:Tyes2462246324641434101002
MCAP340047:0:Tyes---0---
MEXT419610:0:Tyes--110393280-
MFLA265072:0:Tyes47747647572320482
MLOT266835:2:Tyes--4170115940-
MMAG342108:0:Tyes11301131113203569520-
MMAR267377:0:Tyes-0-444---
MMAR368407:0:Tyes---0---
MMAR394221:0:Tyes-57457505475561628
MMAR402880:1:Tyes---0---
MMAR426368:0:Tyes-0-456---
MMAR444158:0:Tyes---0---
MMYC272632:0:Tyes---0---
MPET420662:1:Tyes37036936885602373
MSP266779:3:Tyes--5080286314-
MSP400668:0:Tyes3452845284428430
MSP409:2:Tyes--1548489740-
MSTA339860:0:Tyes-0-----
MSUC221988:0:Tyes1402-17902192171399
MTHE187420:0:Tyes-0-----
MTHE264732:0:Tyes---4020975-
MTHE349307:0:Tyes-0-421---
MXAN246197:0:Tyes-20856119-
NARO279238:0:Tyes-78169901596383-
NEUR228410:0:Tyes57585910941053
NEUT335283:2:Tyes6476466450726727650
NGON242231:0:Tyes--02153461591-
NHAM323097:2:Tyes--01432841837-
NMEN122586:0:Tno1-04873321021-
NMEN122587:0:Tyes492-4919587820-
NMEN272831:0:Tno454-4538867200-
NMEN374833:0:Tno503-5029617740-
NMUL323848:3:Tyes13311330132901701691334
NOCE323261:1:Tyes202203204012-
NPHA348780:2:Tyes-0-----
NSEN222891:0:Tyes----0--
NSP103690:6:Tyes--01297-2385-
NSP387092:0:Tyes---0863927-
NWIN323098:0:Tyes---41630-
OANT439375:4:Tyes---05662-
OANT439375:5:Tyes--0----
OCAR504832:0:Tyes--08598582-
OIHE221109:0:Tyes--186319450765-
OTSU357244:0:Fyes---0---
PAER208963:0:Tyes3452835360
PAER208964:0:Tno32313081035
PARC259536:0:Tyes-682683-13540-
PATL342610:0:Tyes5432108
PCAR338963:0:Tyes--19146201-
PCRY335284:1:Tyes-638639-9860-
PDIS435591:0:Tyes--603-5620-
PENT384676:0:Tyes3453181317731760
PFLU205922:0:Tyes12111051015
PFLU216595:1:Tyes12111051015
PFLU220664:0:Tyes13121151016
PGIN242619:0:Tyes--1352--0-
PHAL326442:0:Tyes210---5
PHAL326442:1:Tyes---012-
PING357804:0:Tyes3451650164916480
PINT246198:1:Tyes--0-16--
PLUM243265:0:Fyes3451367136613650
PLUT319225:0:Tyes---04331560-
PMAR167539:0:Tyes--366--0-
PMAR167540:0:Tyes-----0-
PMAR167542:0:Tyes-----0-
PMAR167546:0:Tyes-----0-
PMAR167555:0:Tyes--422--0-
PMAR59920:0:Tno--374--0-
PMAR74546:0:Tyes-----0-
PMAR74547:0:Tyes--0----
PMEN399739:0:Tyes13121151016
PMUL272843:1:Tyes1907-0631901881904
PNAP365044:8:Tyes01254128127-
PPEN278197:0:Tyes---370-0-
PPRO298386:2:Tyes3451718190
PPUT160488:0:Tno3451751791800
PPUT351746:0:Tyes3451841881890
PPUT76869:0:Tno3451301341350
PRUM264731:0:Tyes--2832-0--
PSP117:0:Tyes---046252745-
PSP296591:2:Tyes16316216150501166
PSP312153:0:Tyes-10201019011551154-
PSP56811:2:Tyes-19061760-125701910
PSTU379731:0:Tyes22212031025
PSYR205918:0:Tyes3451214150
PSYR223283:2:Tyes3451316170
PTHE370438:0:Tyes--43301361379-
PTOR263820:0:Tyes-0-----
RAKA293614:0:Fyes--0----
RALB246199:0:Tyes---0---
RBEL336407:0:Tyes--0----
RBEL391896:0:Fno--0----
RCAN293613:0:Fyes--30---
RCAS383372:0:Tyes-19263273265001507-
RCON272944:0:Tno--0----
RDEN375451:4:Tyes--0140866--
RETL347834:5:Tyes--2806051320-
REUT264198:3:Tyes1486148514840125612541489
REUT381666:2:Tyes1700169916980137313711703
RFEL315456:2:Tyes--0----
RFER338969:1:Tyes18171686510-
RLEG216596:6:Tyes--3274057633-
RMAS416276:1:Tyes--0----
RMET266264:2:Tyes15591558155709209221562
RPAL258594:0:Tyes--1939010391042-
RPAL316055:0:Tyes--81134150-
RPAL316056:0:Tyes--02351792786-
RPAL316057:0:Tyes--751186005-
RPAL316058:0:Tyes--597013451341-
RPOM246200:1:Tyes-1639660684753-
RPRO272947:0:Tyes-0-----
RRIC392021:0:Fno--0----
RRIC452659:0:Tyes--0----
RRUB269796:1:Tyes-29162915085196-
RSOL267608:1:Tyes34513392172190
RSP101510:3:Fyes----0--
RSP357808:0:Tyes-7631437245401423-
RSPH272943:4:Tyes-869870010501198-
RSPH349101:2:Tno-864865010261150-
RSPH349102:5:Tyes-1511151005131218-
RXYL266117:0:Tyes-----0-
SACI56780:0:Tyes---17501452653
SAGA205921:0:Tno--101001483454-
SAGA208435:0:Tno--109601632455-
SAGA211110:0:Tyes---01550397-
SALA317655:1:Tyes-1592159124993940-
SAUR158878:1:Tno--1105115301-
SAUR158879:1:Tno--989103701-
SAUR196620:0:Tno--1023113501-
SAUR273036:0:Tno---104101-
SAUR282458:0:Tno--1051116301-
SAUR282459:0:Tno--1075112201-
SAUR359786:1:Tno--1109115801-
SAUR359787:1:Tno--1102115401-
SAUR367830:3:Tno--958106501-
SAUR418127:0:Tyes--1098114601-
SAUR426430:0:Tno--1025106901-
SAUR93061:0:Fno--1060118401-
SAUR93062:1:Tno--1029108101-
SAVE227882:1:Fyes------0
SBAL399599:3:Tyes5432108
SBAL402882:1:Tno5432108
SBOY300268:1:Tyes6542109
SCO:2:Fyes------0
SDEG203122:0:Tyes3452526270
SDEN318161:0:Tyes3451314150
SDYS300267:1:Tyes6542109
SELO269084:0:Tyes--1309--8490
SENT209261:0:Tno3451011120
SENT220341:0:Tno98721012
SENT295319:0:Tno345910110
SENT321314:2:Tno109821013
SENT454169:2:Tno12111021015
SEPI176279:1:Tyes--95399401764
SEPI176280:0:Tno--204245145914580
SFLE198214:0:Tyes6542109
SFLE373384:0:Tno6542109
SFUM335543:0:Tyes--3880699700-
SGLO343509:3:Tyes109821013
SGOR29390:0:Tyes--5016680--
SHAE279808:0:Tyes--44012061205-
SHAL458817:0:Tyes345910110
SHIGELLA:0:Tno6542109
SLAC55218:1:Fyes-83840542724-
SLOI323850:0:Tyes3457890
SMED366394:2:Tyes--0----
SMED366394:3:Tyes---308003097-
SMEL266834:1:Tyes--0----
SMEL266834:2:Tyes---046916-
SMUT210007:0:Tyes--124001462--
SONE211586:1:Tyes18171621021
SPEA398579:0:Tno34589100
SPNE1313:0:Tyes--46101044210-
SPNE170187:0:Tyes--52701016262-
SPNE171101:0:Tno--4670999213-
SPNE487213:0:Tno--77117312890-
SPNE487214:0:Tno--48001027228-
SPNE488221:0:Tno--47201009217-
SPRO399741:1:Tyes12111021015
SPYO160490:0:Tno--09111466--
SPYO186103:0:Tno--010011589--
SPYO193567:0:Tno--90801158--
SPYO198466:0:Tno--09071608--
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