CANDIDATE ID: 354

CANDIDATE ID: 354

NUMBER OF GENES: 7
AVERAGE SCORE:    9.9921424e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    8.5714286e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G7168 (arnA) (b2255)
   Products of gene:
     - G7168-MONOMER (fused UDP-L-Ara4N formyltransferase and UDP-GlcA C-4''-decarboxylase)
     - CPLX0-7718 (UDP-L-Ara4N formyltransferase / UDP-GlcA C-4"-decarboxylase)
       Reactions:
        UDP-4-amino-4-deoxy-beta-L-arabinopyranose + 10-formyl-tetrahydrofolate  ->  UDP-4-deoxy-4-formamido-beta-L-arabinopyranose + tetrahydrofolate + 3 H+
         In pathways
         PWY0-1338 (biosynthesis of  4-amino-4-deoxy-L-arabinose-modified lipid A)
        UDP-D-glucuronate + NAD+  ->  UDP-beta-L-threo-pentapyranos-4-ulose + CO2 + NADH
         In pathways
         PWY0-1338 (biosynthesis of  4-amino-4-deoxy-L-arabinose-modified lipid A)

- EG12163 (rsmB) (b3289)
   Products of gene:
     - EG12163-MONOMER (16S rRNA m5C967 methyltransferase)
       Reactions:
        cytosine967 in 16S rRNA + S-adenosyl-L-methionine  ->  5-methylcytosine967 in 16S rRNA + S-adenosyl-L-homocysteine

- EG11268 (fmt) (b3288)
   Products of gene:
     - EG11268-MONOMER (10-formyltetrahydrofolate:L-methionyl-tRNAfMet N-formyltransferase)
       Reactions:
        L-methionyl-tRNAfmet + 10-formyl-tetrahydrofolate + H2O  ->  N-formyl-L-methionyl-tRNAfmet + tetrahydrofolate

- EG11192 (yicC) (b3644)
   Products of gene:
     - EG11192-MONOMER (conserved protein)

- EG10965 (gmk) (b3648)
   Products of gene:
     - GUANYL-KIN-MONOMER (Gmk)
     - GUANYL-KIN-CPLX (deoxyguanylate kinase / guanylate kinase)
       Reactions:
        ATP + dGMP  =  ADP + 2'-deoxyguanosine-5'-diphosphate + H+
        GMP + ATP  =  GDP + ADP + H+
         In pathways
         PRPP-PWY (superpathway of histidine, purine, and pyrimidine biosynthesis)
         DENOVOPURINE2-PWY (purine nucleotides de novo biosynthesis I)
         PWY-6125 (guanosine nucleotides de novo biosynthesis)
         P1-PWY (P1-PWY)

- EG10829 (recG) (b3652)
   Products of gene:
     - EG10829-MONOMER (RecG DNA helicase)
       Reactions:
        a DNA with unresolved recombinational or Holliday junctions, created by RecA  =  a DNA segment

- EG10004 (dfp) (b3639)
   Products of gene:
     - EG10004-MONOMER (Dfp)
     - CPLX0-341 (fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase)
       Reactions:
        D-4'-phosphopantothenate + L-cysteine + CTP  ->  diphosphate + CMP + R-4'-phosphopantothenoyl-L-cysteine + H+
         In pathways
         PANTOSYN-PWY (pantothenate and coenzyme A biosynthesis I)
         PWY-4221 (PWY-4221)
         PWY-4242 (PWY-4242)
         COA-PWY (coenzyme A biosynthesis)
        R-4'-phosphopantothenoyl-L-cysteine + H+  ->  4'-phosphopantetheine + CO2
         In pathways
         PANTOSYN-PWY (pantothenate and coenzyme A biosynthesis I)
         PWY-4221 (PWY-4221)
         PWY-4242 (PWY-4242)
         COA-PWY (coenzyme A biosynthesis)



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ORGANISMS CONTAINING AT LEAST 6 GENES FROM THE GROUP:

Total number of orgs: 305
Effective number of orgs (counting one per cluster within 468 clusters): 208

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317587
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329537
YPES386656 ncbi Yersinia pestis Pestoides F7
YPES377628 ncbi Yersinia pestis Nepal5167
YPES360102 ncbi Yersinia pestis Antiqua7
YPES349746 ncbi Yersinia pestis Angola7
YPES214092 ncbi Yersinia pestis CO927
YPES187410 ncbi Yersinia pestis KIM 107
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80817
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A6
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110186
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103316
XFAS405440 ncbi Xylella fastidiosa M126
XFAS183190 ncbi Xylella fastidiosa Temecula16
XFAS160492 ncbi Xylella fastidiosa 9a5c6
XCAM487884 Xanthomonas campestris pv. paulliniae6
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-106
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80046
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339136
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3066
XAUT78245 ncbi Xanthobacter autotrophicus Py26
VVUL216895 ncbi Vibrio vulnificus CMCP67
VVUL196600 ncbi Vibrio vulnificus YJ0167
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106337
VFIS312309 ncbi Vibrio fischeri ES1146
VEIS391735 ncbi Verminephrobacter eiseniae EF01-26
VCHO345073 ncbi Vibrio cholerae O3957
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169617
TTUR377629 ncbi Teredinibacter turnerae T79016
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB47
TSP1755 Thermoanaerobacter sp.7
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332237
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252597
TCRU317025 ncbi Thiomicrospira crunogena XCL-27
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen6
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT27
STHE292459 ncbi Symbiobacterium thermophilum IAM 148637
SSP94122 ncbi Shewanella sp. ANA-37
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)6
SSP321327 ncbi Synechococcus sp. JA-3-3Ab6
SSP292414 ncbi Ruegeria sp. TM10406
SSP1148 ncbi Synechocystis sp. PCC 68036
SSON300269 ncbi Shigella sonnei Ss0467
SSED425104 ncbi Shewanella sediminis HAW-EB37
SPRO399741 ncbi Serratia proteamaculans 5687
SPEA398579 ncbi Shewanella pealeana ATCC 7003457
SONE211586 ncbi Shewanella oneidensis MR-17
SMEL266834 ncbi Sinorhizobium meliloti 10216
SMED366394 ncbi Sinorhizobium medicae WSM4196
SLOI323850 ncbi Shewanella loihica PV-47
SLAC55218 Ruegeria lacuscaerulensis6
SHIGELLA ncbi Shigella flexneri 2a str. 2457T7
SHAL458817 ncbi Shewanella halifaxensis HAW-EB47
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14356
SGLO343509 ncbi Sodalis glossinidius morsitans7
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB6
SFLE373384 ncbi Shigella flexneri 5 str. 84017
SFLE198214 ncbi Shigella flexneri 2a str. 3017
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4767
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B677
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91507
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT187
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty27
SDYS300267 ncbi Shigella dysenteriae Sd1977
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-406
SBOY300268 ncbi Shigella boydii Sb2277
SBAL402882 ncbi Shewanella baltica OS1857
SBAL399599 ncbi Shewanella baltica OS1957
SAUR93062 ncbi Staphylococcus aureus aureus COL6
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83256
SAUR426430 ncbi Staphylococcus aureus aureus Newman6
SAUR418127 ncbi Staphylococcus aureus aureus Mu36
SAUR367830 Staphylococcus aureus aureus USA3006
SAUR359787 ncbi Staphylococcus aureus aureus JH16
SAUR359786 ncbi Staphylococcus aureus aureus JH96
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4766
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2526
SAUR273036 ncbi Staphylococcus aureus RF1226
SAUR196620 ncbi Staphylococcus aureus aureus MW26
SAUR158879 ncbi Staphylococcus aureus aureus N3156
SAUR158878 ncbi Staphylococcus aureus aureus Mu506
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170256
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170297
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.16
RSOL267608 ncbi Ralstonia solanacearum GMI10007
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111706
RPAL316058 ncbi Rhodopseudomonas palustris HaA26
RPAL316057 ncbi Rhodopseudomonas palustris BisB56
RPAL316056 ncbi Rhodopseudomonas palustris BisB186
RPAL316055 ncbi Rhodopseudomonas palustris BisA536
RPAL258594 ncbi Rhodopseudomonas palustris CGA0096
RMET266264 ncbi Ralstonia metallidurans CH347
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38416
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H167
REUT264198 ncbi Ralstonia eutropha JMP1347
RETL347834 ncbi Rhizobium etli CFN 426
RDEN375451 ncbi Roseobacter denitrificans OCh 1147
RALB246199 Ruminococcus albus 86
PTHE370438 ncbi Pelotomaculum thermopropionicum SI7
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30007
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a7
PSTU379731 ncbi Pseudomonas stutzeri A15017
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-17
PSP296591 ncbi Polaromonas sp. JS6666
PPUT76869 ncbi Pseudomonas putida GB-17
PPUT351746 ncbi Pseudomonas putida F17
PPUT160488 ncbi Pseudomonas putida KT24407
PPRO298386 ncbi Photobacterium profundum SS97
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257456
PNAP365044 ncbi Polaromonas naphthalenivorans CJ26
PMUL272843 ncbi Pasteurella multocida multocida Pm706
PMOB403833 ncbi Petrotoga mobilis SJ956
PMEN399739 ncbi Pseudomonas mendocina ymp7
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO17
PING357804 ncbi Psychromonas ingrahamii 377
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-57
PFLU216595 ncbi Pseudomonas fluorescens SBW257
PFLU205922 ncbi Pseudomonas fluorescens Pf0-17
PENT384676 ncbi Pseudomonas entomophila L487
PCAR338963 ncbi Pelobacter carbinolicus DSM 23807
PATL342610 ncbi Pseudoalteromonas atlantica T6c7
PARC259536 ncbi Psychrobacter arcticus 273-46
PAER208964 ncbi Pseudomonas aeruginosa PAO17
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA147
OIHE221109 ncbi Oceanobacillus iheyensis HTE8316
OCAR504832 ncbi Oligotropha carboxidovorans OM56
OANT439375 ncbi Ochrobactrum anthropi ATCC 491886
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2556
NOCE323261 ncbi Nitrosococcus oceani ATCC 197077
NMUL323848 ncbi Nitrosospira multiformis ATCC 251967
NMEN272831 ncbi Neisseria meningitidis FAM186
NMEN122587 ncbi Neisseria meningitidis Z24916
NMEN122586 ncbi Neisseria meningitidis MC586
NHAM323097 ncbi Nitrobacter hamburgensis X146
NGON242231 ncbi Neisseria gonorrhoeae FA 10906
NEUT335283 ncbi Nitrosomonas eutropha C917
NEUR228410 ncbi Nitrosomonas europaea ATCC 197187
MXAN246197 ncbi Myxococcus xanthus DK 16227
MTHE264732 ncbi Moorella thermoacetica ATCC 390736
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E6
MSP409 Methylobacterium sp.7
MSP400668 ncbi Marinomonas sp. MWYL16
MSP266779 ncbi Chelativorans sp. BNC16
MPET420662 ncbi Methylibium petroleiphilum PM17
MMAR394221 ncbi Maricaulis maris MCS106
MMAG342108 ncbi Magnetospirillum magneticum AMB-17
MLOT266835 ncbi Mesorhizobium loti MAFF3030996
MFLA265072 ncbi Methylobacillus flagellatus KT7
MEXT419610 ncbi Methylobacterium extorquens PA16
MCAP243233 ncbi Methylococcus capsulatus Bath7
MAQU351348 ncbi Marinobacter aquaeolei VT87
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53347
LSPH444177 ncbi Lysinibacillus sphaericus C3-416
LSAK314315 ncbi Lactobacillus sakei sakei 23K6
LPNE400673 ncbi Legionella pneumophila Corby7
LPNE297246 ncbi Legionella pneumophila Paris7
LPNE297245 ncbi Legionella pneumophila Lens7
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 17
LPLA220668 ncbi Lactobacillus plantarum WCFS16
LMON265669 ncbi Listeria monocytogenes 4b F23657
LMON169963 ncbi Listeria monocytogenes EGD-e7
LINN272626 ncbi Listeria innocua Clip112627
LCHO395495 ncbi Leptothrix cholodnii SP-67
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785787
JSP375286 ncbi Janthinobacterium sp. Marseille7
JSP290400 ncbi Jannaschia sp. CCS16
ILOI283942 ncbi Idiomarina loihiensis L2TR7
HSOM228400 ncbi Haemophilus somnus 23366
HSOM205914 ncbi Haemophilus somnus 129PT6
HNEP81032 Hyphomonas neptunium6
HMOD498761 ncbi Heliobacterium modesticaldum Ice16
HINF71421 ncbi Haemophilus influenzae Rd KW206
HINF374930 ncbi Haemophilus influenzae PittEE6
HINF281310 ncbi Haemophilus influenzae 86-028NP6
HHAL349124 ncbi Halorhodospira halophila SL17
HDUC233412 ncbi Haemophilus ducreyi 35000HP6
HCHE349521 ncbi Hahella chejuensis KCTC 23967
HARS204773 ncbi Herminiimonas arsenicoxydans6
GURA351605 ncbi Geobacter uraniireducens Rf47
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-27
GSUL243231 ncbi Geobacter sulfurreducens PCA7
GMET269799 ncbi Geobacter metallireducens GS-157
GKAU235909 ncbi Geobacillus kaustophilus HTA4267
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255866
ESP42895 Enterobacter sp.7
EFER585054 ncbi Escherichia fergusonii ATCC 354697
EFAE226185 ncbi Enterococcus faecalis V5836
ECOO157 ncbi Escherichia coli O157:H7 EDL9337
ECOL83334 Escherichia coli O157:H77
ECOL585397 ncbi Escherichia coli ED1a7
ECOL585057 ncbi Escherichia coli IAI397
ECOL585056 ncbi Escherichia coli UMN0267
ECOL585055 ncbi Escherichia coli 559897
ECOL585035 ncbi Escherichia coli S887
ECOL585034 ncbi Escherichia coli IAI17
ECOL481805 ncbi Escherichia coli ATCC 87397
ECOL469008 ncbi Escherichia coli BL21(DE3)7
ECOL439855 ncbi Escherichia coli SMS-3-57
ECOL413997 ncbi Escherichia coli B str. REL6067
ECOL409438 ncbi Escherichia coli SE117
ECOL405955 ncbi Escherichia coli APEC O17
ECOL364106 ncbi Escherichia coli UTI897
ECOL362663 ncbi Escherichia coli 5367
ECOL331111 ncbi Escherichia coli E24377A7
ECOL316407 ncbi Escherichia coli K-12 substr. W31107
ECOL199310 ncbi Escherichia coli CFT0737
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10437
DSHI398580 ncbi Dinoroseobacter shibae DFL 126
DRED349161 ncbi Desulfotomaculum reducens MI-17
DPSY177439 ncbi Desulfotalea psychrophila LSv546
DOLE96561 ncbi Desulfococcus oleovorans Hxd36
DNOD246195 ncbi Dichelobacter nodosus VCS1703A6
DHAF138119 ncbi Desulfitobacterium hafniense Y517
DARO159087 ncbi Dechloromonas aromatica RCB6
CVIO243365 ncbi Chromobacterium violaceum ATCC 124727
CTET212717 ncbi Clostridium tetani E886
CSP78 Caulobacter sp.6
CSP501479 Citreicella sp. SE456
CSAL290398 ncbi Chromohalobacter salexigens DSM 30436
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CPER289380 ncbi Clostridium perfringens SM1016
CPER195103 ncbi Clostridium perfringens ATCC 131247
CPER195102 ncbi Clostridium perfringens 137
CNOV386415 ncbi Clostridium novyi NT6
CJAP155077 Cellvibrio japonicus6
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29016
CDIF272563 ncbi Clostridium difficile 6307
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C6
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1117
CBUR360115 ncbi Coxiella burnetii RSA 3317
CBUR227377 ncbi Coxiella burnetii RSA 4937
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto7
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6577
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B7
CBOT498213 ncbi Clostridium botulinum B1 str. Okra7
CBOT441772 ncbi Clostridium botulinum F str. Langeland7
CBOT441771 ncbi Clostridium botulinum A str. Hall7
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193977
CBOT36826 Clostridium botulinum A7
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80527
CAULO ncbi Caulobacter crescentus CB157
CACE272562 ncbi Clostridium acetobutylicum ATCC 8247
BWEI315730 ncbi Bacillus weihenstephanensis KBAB46
BVIE269482 ncbi Burkholderia vietnamiensis G47
BTHU412694 ncbi Bacillus thuringiensis Al Hakam6
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-276
BTHA271848 ncbi Burkholderia thailandensis E2647
BSUI470137 ncbi Brucella suis ATCC 234456
BSUI204722 ncbi Brucella suis 13306
BSUB ncbi Bacillus subtilis subtilis 1687
BSP376 Bradyrhizobium sp.7
BSP36773 Burkholderia sp.7
BPUM315750 ncbi Bacillus pumilus SAFR-0327
BPSE320373 ncbi Burkholderia pseudomallei 6687
BPSE320372 ncbi Burkholderia pseudomallei 1710b7
BPSE272560 ncbi Burkholderia pseudomallei K962437
BPET94624 Bordetella petrii6
BPER257313 ncbi Bordetella pertussis Tohama I6
BPAR257311 ncbi Bordetella parapertussis 128226
BMEL359391 ncbi Brucella melitensis biovar Abortus 23086
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M6
BMAL320389 ncbi Burkholderia mallei NCTC 102477
BMAL320388 ncbi Burkholderia mallei SAVP17
BMAL243160 ncbi Burkholderia mallei ATCC 233447
BLIC279010 ncbi Bacillus licheniformis ATCC 145807
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1106
BHEN283166 ncbi Bartonella henselae Houston-16
BHAL272558 ncbi Bacillus halodurans C-1257
BCER572264 ncbi Bacillus cereus 03BB1026
BCER405917 Bacillus cereus W6
BCER315749 ncbi Bacillus cytotoxicus NVH 391-987
BCER288681 ncbi Bacillus cereus E33L6
BCER226900 ncbi Bacillus cereus ATCC 145796
BCEN331272 ncbi Burkholderia cenocepacia HI24247
BCEN331271 ncbi Burkholderia cenocepacia AU 10547
BCAN483179 ncbi Brucella canis ATCC 233656
BBRO257310 ncbi Bordetella bronchiseptica RB506
BANT592021 ncbi Bacillus anthracis A02487
BANT568206 ncbi Bacillus anthracis CDC 6846
BANT261594 ncbi Bacillus anthracis Ames Ancestor6
BANT260799 ncbi Bacillus anthracis Sterne6
BAMY326423 ncbi Bacillus amyloliquefaciens FZB427
BAMB398577 ncbi Burkholderia ambifaria MC40-67
BAMB339670 ncbi Burkholderia ambifaria AMMD7
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9416
ASP76114 ncbi Aromatoleum aromaticum EbN17
ASP62928 ncbi Azoarcus sp. BH727
ASP232721 ncbi Acidovorax sp. JS426
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4497
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL036
APLE416269 ncbi Actinobacillus pleuropneumoniae L206
AORE350688 ncbi Alkaliphilus oremlandii OhILAs7
AMET293826 ncbi Alkaliphilus metalliredigens QYMF7
AHYD196024 Aeromonas hydrophila dhakensis7
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232707
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-17
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C6
ACAU438753 ncbi Azorhizobium caulinodans ORS 5717
ABOR393595 ncbi Alcanivorax borkumensis SK26
ABAU360910 ncbi Bordetella avium 197N6
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3457
AAVE397945 ncbi Acidovorax citrulli AAC00-16


Names of the homologs of the genes in the group in each of these orgs
  G7168   EG12163   EG11268   EG11192   EG10965   EG10829   EG10004   
YPSE349747 YPSIP31758_1727YPSIP31758_3884YPSIP31758_3883YPSIP31758_0055YPSIP31758_0041YPSIP31758_0037YPSIP31758_0060
YPSE273123 YPTB2328YPTB3667YPTB3666YPTB0040YPTB0037YPTB0033YPTB0045
YPES386656 YPDSF_0730YPDSF_0162YPDSF_0163YPDSF_3862YPDSF_3865YPDSF_3869YPDSF_3857
YPES377628 YPN_1874YPN_3829YPN_3828YPN_3807YPN_3810YPN_3814YPN_3802
YPES360102 YPA_1764YPA_3233YPA_3232YPA_3499YPA_3502YPA_3506YPA_3494
YPES349746 YPANGOLA_A2610YPANGOLA_A0613YPANGOLA_A0614YPANGOLA_A0048YPANGOLA_A0045YPANGOLA_A0041YPANGOLA_A0054
YPES214092 YPO2420YPO0240YPO0241YPO0043YPO0040YPO0036YPO0048
YPES187410 Y1919Y4021Y4022Y0098Y0101Y0105Y0093
YENT393305 YE2190YE3891YE3890YE0057YE0047YE0043YE0062
XORY360094 XOOORF_0698XOOORF_0697XOOORF_4204XOOORF_4203XOOORF_4198XOOORF_4882
XORY342109 XOO0548XOO0547XOO1041XOO1042XOO1048XOO0463
XORY291331 XOO0587XOO0586XOO1144XOO1145XOO1151XOO0496
XFAS405440 XFASM12_1927XFASM12_1928XFASM12_0844XFASM12_0843XFASM12_1872XFASM12_0126
XFAS183190 PD_1761PD_1762PD_0721PD_0720PD_1705PD_0118
XFAS160492 XF0928XF0927XF1504XF1503XF0354XF0149
XCAM487884 XCC-B100_3928XCC-B100_3929XCC-B100_0934XCC-B100_0935XCC-B100_0947XCC-B100_4043
XCAM316273 XCAORF_0559XCAORF_0558XCAORF_3591XCAORF_3590XCAORF_3578XCAORF_0430
XCAM314565 XC_3817XC_3818XC_0959XC_0958XC_0947XC_3943
XCAM190485 XCC3747XCC3748XCC3250XCC3249XCC3238XCC3859
XAXO190486 XAC3799XAC3800XAC3396XAC3395XAC3391XAC3914
XAUT78245 XAUT_0941XAUT_3304XAUT_3135XAUT_3136XAUT_4415XAUT_0078
VVUL216895 VV1_1047VV1_1046VV1_1047VV1_0833VV1_0850VV1_0855VV1_0828
VVUL196600 VV3226VV3227VV3226VV0278VV0243VV0239VV0283
VPAR223926 VP3043VP3044VP3043VP0176VP0161VP0157VP0181
VFIS312309 VF2545VF2544VF0110VF0106VF2460VF0125
VEIS391735 VEIS_2266VEIS_4081VEIS_4159VEIS_4218VEIS_2335VEIS_2654
VCHO345073 VC0395_A2474VC0395_A2475VC0395_A2474VC0395_A2588VC0395_A2280VC0395_A2283VC0395_A2595
VCHO VC0045VC0044VC0045VC0209VC2708VC2711VC0215
TTUR377629 TERTU_0035TERTU_0036TERTU_0175TERTU_0174TERTU_4570TERTU_0185
TTEN273068 TTE1506TTE1503TTE1506TTE1513TTE1511TTE1492TTE1509
TSP1755 TETH514_1755TETH514_1752TETH514_1755TETH514_1763TETH514_1761TETH514_1741TETH514_1759
TPSE340099 TETH39_1319TETH39_1316TETH39_1319TETH39_1326TETH39_1324TETH39_1305TETH39_1322
TDEN292415 TBD_0015TBD_0016TBD_0015TBD_0474TBD_0473TBD_0469TBD_2587
TCRU317025 TCR_0192TCR_0191TCR_0192TCR_2055TCR_2138TCR_2153TCR_1915
SWOL335541 SWOL_1231SWOL_1228SWOL_1231SWOL_1239SWOL_1237SWOL_1235
STYP99287 STM2299STM3408STM3407STM3735STM3740STM3744STM3730
STHE292459 STH1344STH1349STH1344STH1337STH1339STH1384STH1341
SSP94122 SHEWANA3_0034SHEWANA3_0033SHEWANA3_0034SHEWANA3_3778SHEWANA3_3810SHEWANA3_0348SHEWANA3_3771
SSP321332 CYB_1993CYB_1963CYB_1993CYB_0056CYB_2808CYB_0983
SSP321327 CYA_1691CYA_1094CYA_1691CYA_2697CYA_2013CYA_0161
SSP292414 TM1040_0089TM1040_2577TM1040_1267TM1040_1266TM1040_1397TM1040_0458
SSP1148 SLR0070SLR0679SLR0070SLR1123SLR0020SLL0250
SSON300269 SSO_2316SSO_3429SSO_3428SSO_3762SSO_3757SSO_3753SSO_3767
SSED425104 SSED_0924SSED_0033SSED_0034SSED_0377SSED_0336SSED_0329SSED_0384
SPRO399741 SPRO_2156SPRO_4513SPRO_4512SPRO_4848SPRO_4867SPRO_4871SPRO_4843
SPEA398579 SPEA_0030SPEA_0029SPEA_0030SPEA_3845SPEA_3877SPEA_3884SPEA_3838
SONE211586 SO_0031SO_0030SO_0031SO_4257SO_0361SO_4364SO_4249
SMEL266834 SMC04090SMC01100SMC00576SMC00577SMC00228SMC01161
SMED366394 SMED_3191SMED_0055SMED_0758SMED_0759SMED_1401SMED_3566
SLOI323850 SHEW_3737SHEW_3738SHEW_3737SHEW_3489SHEW_3497SHEW_3507SHEW_3482
SLAC55218 SL1157_1320SL1157_1870SL1157_2860SL1157_2859SL1157_2948SL1157_0579
SHIGELLA YBFGSUNFMTYICCGMKRECGDFP
SHAL458817 SHAL_0026SHAL_0025SHAL_0026SHAL_0421SHAL_0392SHAL_0385SHAL_0428
SHAE279808 SH1699SH1698SH1699SH1705SH1687SH1703
SGLO343509 SG1843SG2248SG2247SG2214SG2221SG2224SG2209
SFUM335543 SFUM_3556SFUM_0150SFUM_0148SFUM_3632SFUM_3630SFUM_0467
SFLE373384 SFV_2325SFV_3308SFV_3307SFV_3886SFV_3881SFV_3877SFV_3891
SFLE198214 AAN43848.1AAN44783.1AAN44782.1AAN45130.1AAN45135.1AAN45139.1AAN45125.1
SENT454169 SEHA_C2539SEHA_C3712SEHA_C3711SEHA_C4061SEHA_C4066SEHA_C4070SEHA_C4056
SENT321314 SCH_3343SCH_3344SCH_3343SCH_3658SCH_3664SCH_3668SCH_3653
SENT295319 SPA0564SPA3275SPA3274SPA3587SPA3592SPA3596SPA3582
SENT220341 STY2529STY4389STY4390STY4059STY4052STY4048STY4064
SENT209261 T0564T4096T4097T3783T3778T3774T3788
SDYS300267 SDY_2451SDY_3465SDY_3464SDY_4075SDY_4080SDY_4084SDY_4069
SDEN318161 SDEN_0022SDEN_0023SDEN_0318SDEN_3433SDEN_3476SDEN_0325
SDEG203122 SDE_0019SDE_0020SDE_3684SDE_3695SDE_3717SDE_3677
SBOY300268 SBO_2292SBO_3282SBO_3281SBO_3646SBO_3729SBO_3725SBO_3641
SBAL402882 SHEW185_0026SHEW185_0025SHEW185_0026SHEW185_0367SHEW185_0353SHEW185_0344SHEW185_0375
SBAL399599 SBAL195_0030SBAL195_0029SBAL195_0030SBAL195_0380SBAL195_0360SBAL195_0351SBAL195_0387
SAUR93062 SACOL1228SACOL1229SACOL1228SACOL1221SACOL1241SACOL1223
SAUR93061 SAOUHSC_01183SAOUHSC_01184SAOUHSC_01183SAOUHSC_01176SAOUHSC_01194SAOUHSC_01178
SAUR426430 NWMN_1126NWMN_1127NWMN_1126NWMN_1120NWMN_1137NWMN_1121
SAUR418127 SAHV_1206SAHV_1207SAHV_1206SAHV_1199SAHV_1217SAHV_1201
SAUR367830 SAUSA300_1109SAUSA300_1110SAUSA300_1109SAUSA300_1102SAUSA300_1120SAUSA300_1104
SAUR359787 SAURJH1_1300SAURJH1_1301SAURJH1_1300SAURJH1_1293SAURJH1_1311SAURJH1_1295
SAUR359786 SAURJH9_1275SAURJH9_1276SAURJH9_1275SAURJH9_1268SAURJH9_1286SAURJH9_1270
SAUR282459 SAS1150SAS1151SAS1150SAS1143SAS1161SAS1145
SAUR282458 SAR1192SAR1193SAR1192SAR1185SAR1203SAR1187
SAUR273036 SAB1080SAB1081SAB1080SAB1073SAB1091SAB1075
SAUR196620 MW1099MW1100MW1099MW1092MW1110MW1094
SAUR158879 SA1059SA1060SA1059SA1052SA1070SA1054
SAUR158878 SAV1216SAV1217SAV1216SAV1209SAV1227SAV1211
RSPH349102 RSPH17025_2926RSPH17025_0151RSPH17025_1103RSPH17025_1104RSPH17025_1160RSPH17025_0484
RSPH349101 RSPH17029_1794RSPH17029_2765RSPH17029_2535RSPH17029_1564RSPH17029_1563RSPH17029_1281RSPH17029_2252
RSPH272943 RSP_0160RSP_0875RSP_2920RSP_2919RSP_2623NRSP_0599
RSOL267608 RSC1319RSC0075RSC0072RSC2156RSC2155RSC2711RSC2461
RRUB269796 RRU_A3660RRU_A3351RRU_A0428RRU_A0429RRU_A1728RRU_A3796
RPAL316058 RPB_0086RPB_0674RPB_2471RPB_2472RPB_2852RPB_0622
RPAL316057 RPD_0717RPD_0080RPD_2975RPD_2974RPD_2620RPD_0209
RPAL316056 RPC_0025RPC_0806RPC_2304RPC_2305RPC_2608RPC_0380
RPAL316055 RPE_0028RPE_0655RPE_3302RPE_3301RPE_2788RPE_0467
RPAL258594 RPA0030RPA0622RPA3070RPA3069RPA2662RPA0081
RMET266264 RMET_4827RMET_3562RMET_3564RMET_0855RMET_0856RMET_2942RMET_2887
RLEG216596 RL4724RL0433RL1562RL1563RL2384RL0357
RFER338969 RFER_3590RFER_3859RFER_1626RFER_3147RFER_3688RFER_2647
REUT381666 H16_A1425H16_A3697H16_A3699H16_A0952H16_A0953H16_A3111H16_A3048
REUT264198 REUT_B3974REUT_A3405REUT_A3407REUT_A2474REUT_A2473REUT_A2806REUT_A2747
RETL347834 RHE_CH04109RHE_CH00414RHE_CH01447RHE_CH01448RHE_CH02093RHE_CH00342
RDEN375451 RD1_1339RD1_0653RD1_1339RD1_2637RD1_2638RD1_2604RD1_1200
RALB246199 GRAORF_1844GRAORF_1844GRAORF_1837GRAORF_1839GRAORF_3442GRAORF_3948
PTHE370438 PTH_1790PTH_1788PTH_1790PTH_1797PTH_1795PTH_1757PTH_1793
PSYR223283 PSPTO_0178PSPTO_0179PSPTO_0178PSPTO_0076PSPTO_0075PSPTO_0065PSPTO_0085
PSYR205918 PSYR_2691PSYR_0017PSYR_0018PSYR_0212PSYR_0211PSYR_0201PSYR_0221
PSTU379731 PST_0020PST_0019PST_0020PST_0462PST_0461PST_0135PST_0472
PSP312153 PNUC_0431PNUC_2077PNUC_2078PNUC_1079PNUC_1078PNUC_1787PNUC_1742
PSP296591 BPRO_4436BPRO_4638BPRO_1336BPRO_1335BPRO_0468BPRO_3180
PPUT76869 PPUTGB1_0083PPUTGB1_0082PPUTGB1_0083PPUTGB1_5343PPUTGB1_5344PPUTGB1_5358PPUTGB1_5336
PPUT351746 PPUT_0083PPUT_0082PPUT_0083PPUT_5203PPUT_5204PPUT_5219PPUT_5195
PPUT160488 PP_0067PP_0066PP_0067PP_5295PP_5296PP_5310PP_5285
PPRO298386 PBPRA3580PBPRA3581PBPRA3580PBPRA0197PBPRA0191PBPRA0187PBPRA0201
PPEN278197 PEPE_0829PEPE_0830PEPE_0829PEPE_0825PEPE_0839PEPE_0827
PNAP365044 PNAP_3632PNAP_3877PNAP_0812PNAP_0811PNAP_0322PNAP_1186
PMUL272843 PM1561PM1560PM1875PM0922PM0919PM1153
PMOB403833 PMOB_0050PMOB_0050PMOB_0098PMOB_0100PMOB_0196PMOB_0591
PMEN399739 PMEN_0054PMEN_0053PMEN_0054PMEN_4387PMEN_4388PMEN_4397PMEN_4377
PLUM243265 PLU2658PLU4697PLU4696PLU4871PLU0274PLU0259PLU4866
PING357804 PING_0079PING_0080PING_0079PING_3652PING_3623PING_3492PING_0057
PHAL326442 PSHAA0021PSHAA0022PSHAA2789PSHAA2790PSHAA2799PSHAA2644
PFLU220664 PFL_3045PFL_0020PFL_0021PFL_6060PFL_6061PFL_6071PFL_6052
PFLU216595 PFLU3041PFLU0016PFLU0017PFLU5992PFLU5993PFLU6003PFLU5983
PFLU205922 PFL_2843PFL_0015PFL_0016PFL_5548PFL_5549PFL_5559PFL_5540
PENT384676 PSEEN0024PSEEN0023PSEEN0024PSEEN5440PSEEN5441PSEEN5455PSEEN5432
PCAR338963 PCAR_0244PCAR_0241PCAR_0244PCAR_1284PCAR_1285PCAR_1609PCAR_2011
PATL342610 PATL_0022PATL_0021PATL_0022PATL_4283PATL_0347PATL_0353PATL_0045
PARC259536 PSYC_2139PSYC_2138PSYC_2139PSYC_1723PSYC_2085PSYC_1833
PAER208964 PA3554PA0017PA0018PA5335PA5336PA5345PA5320
PAER208963 PA14_18350PA14_00180PA14_00190PA14_70430PA14_70440PA14_70570PA14_70240
OIHE221109 OB1506OB1507OB1506OB1502OB1520OB1504
OCAR504832 OCAR_4335OCAR_7539OCAR_6364OCAR_6363OCAR_6213OCAR_4489
OANT439375 OANT_1089OANT_1345OANT_0575OANT_0576OANT_3642OANT_1319
NWIN323098 NWI_0156NWI_3065NWI_1684NWI_1683NWI_1515NWI_0043
NOCE323261 NOC_3015NOC_3016NOC_3015NOC_0956NOC_1212NOC_1216NOC_2992
NMUL323848 NMUL_A0393NMUL_A0392NMUL_A0393NMUL_A0065NMUL_A0052NMUL_A0884NMUL_A2137
NMEN272831 NMC0104NMC0103NMC0661NMC1579NMC0433NMC1576
NMEN122587 NMA0162NMA0163NMA0916NMA1919NMA0675NMA1916
NMEN122586 NMB_0112NMB_0111NMB_0711NMB_1661NMB_1788NMB_1658
NHAM323097 NHAM_0197NHAM_3694NHAM_2349NHAM_2348NHAM_2055NHAM_0051
NGON242231 NGO1869NGO1870NGO0286NGO1310NGO0117NGO1307
NEUT335283 NEUT_0391NEUT_0390NEUT_0391NEUT_2372NEUT_0614NEUT_1558NEUT_0783
NEUR228410 NE1971NE1972NE1971NE2472NE2254NE1850NE1463
MXAN246197 MXAN_1399MXAN_1401MXAN_1399MXAN_4706MXAN_4705MXAN_3406MXAN_4395
MTHE264732 MOTH_0898MOTH_0900MOTH_0898MOTH_0890MOTH_0923MOTH_0893
MSUC221988 MS2203MS2202MS0253MS1738MS1735MS1938
MSP409 M446_4239M446_2963M446_4239M446_3194M446_3193M446_6310M446_6249
MSP400668 MMWYL1_0015MMWYL1_0016MMWYL1_4362MMWYL1_4384MMWYL1_4390MMWYL1_0623
MSP266779 MESO_3418MESO_0393MESO_1764MESO_1763MESO_1704MESO_4055
MPET420662 MPE_A0284MPE_A0272MPE_A0284MPE_A2708MPE_A2715MPE_A3737MPE_A2571
MMAR394221 MMAR10_0446MMAR10_2924MMAR10_0446MMAR10_1219MMAR10_1220MMAR10_1487
MMAG342108 AMB0242AMB0147AMB0242AMB0747AMB0748AMB2467AMB0202
MLOT266835 MLR4098MLL4854MLR7856MLR7857MLR0830MLR3167
MFLA265072 MFLA_0186MFLA_0184MFLA_0186MFLA_0046MFLA_0048MFLA_0052MFLA_0314
MEXT419610 MEXT_0551MEXT_1635MEXT_1999MEXT_2000MEXT_4161MEXT_3927
MCAP243233 MCA_2844MCA_2845MCA_2844MCA_3026MCA_2975MCA_2025MCA_2784
MAQU351348 MAQU_0042MAQU_0041MAQU_0042MAQU_0549MAQU_0634MAQU_0640MAQU_3563
LWEL386043 LWE1842LWE1841LWE1842LWE1847LWE1846LWE1830LWE1844
LSPH444177 BSPH_1489BSPH_1490BSPH_1489BSPH_1483BSPH_1484BSPH_1514
LSAK314315 LSA0689LSA0690LSA0689LSA0685LSA0699LSA0687
LPNE400673 LPC_0548LPC_0549LPC_0548LPC_1495LPC_1494LPC_1518LPC_1990
LPNE297246 LPP2647LPP2646LPP2647LPP1993LPP1992LPP2015LPP2552
LPNE297245 LPL2517LPL2516LPL2517LPL1988LPL1987LPL2010LPL2408
LPNE272624 LPG2594LPG2593LPG2594LPG2011LPG2010LPG2033LPG2488
LPLA220668 LP_1616LP_1617LP_1616LP_1612LP_1627LP_1614
LMON265669 LMOF2365_1851LMOF2365_1850LMOF2365_1851LMOF2365_1856LMOF2365_1855LMOF2365_1839LMOF2365_1853
LMON169963 LMO1823LMO1822LMO1823LMO1828LMO1827LMO1811LMO1825
LINN272626 LIN1937LIN1936LIN1937LIN1942LIN1941LIN1925LIN1939
LCHO395495 LCHO_0351LCHO_4003LCHO_0351LCHO_0708LCHO_0729LCHO_1580LCHO_2645
KPNE272620 GKPORF_B3189GKPORF_B3029GKPORF_B3028GKPORF_B3353GKPORF_B3357GKPORF_B3361GKPORF_B3342
JSP375286 MMA_0144MMA_0158MMA_0144MMA_1329MMA_1328MMA_0349MMA_0826
JSP290400 JANN_4040JANN_0469JANN_2441JANN_2440JANN_2503JANN_0907
ILOI283942 IL0017IL0016IL0017IL2421IL2382IL2374IL0239
HSOM228400 HSM_1932HSM_1933HSM_0325HSM_0546HSM_0549HSM_0008
HSOM205914 HS_0039HS_0040HS_1293HS_1457HS_1454HS_0143
HNEP81032 HNE_0513HNE_0513HNE_2154HNE_2153HNE_1987HNE_3268
HMOD498761 HM1_2133HM1_2133HM1_2124HM1_2127HM1_2150HM1_2129
HINF71421 HI_0624HI_0623HI_0467HI_1743HI_1740HI_0953
HINF374930 CGSHIEE_09110CGSHIEE_09115CGSHIEE_00655CGSHIEE_03320CGSHIEE_03335CGSHIEE_07195
HINF281310 NTHI0723NTHI0724NTHI0598NTHI2054NTHI2051NTHI1126
HHAL349124 HHAL_2322HHAL_2321HHAL_2322HHAL_0975HHAL_0976HHAL_0967HHAL_2299
HDUC233412 HD_1992HD_2029HD_0302HD_1830HD_1921HD_0733
HCHE349521 HCH_00029HCH_00028HCH_00029HCH_06336HCH_06315HCH_06309HCH_01021
HARS204773 HEAR0133HEAR0119HEAR2129HEAR2130HEAR0301HEAR0843
GURA351605 GURA_3698GURA_0193GURA_0819GURA_3163GURA_3162GURA_1869GURA_2927
GTHE420246 GTNG_1025GTNG_1026GTNG_1025GTNG_1018GTNG_1020GTNG_1038GTNG_1022
GSUL243231 GSU_0130GSU_3373GSU_0130GSU_2239GSU_2238GSU_1326GSU_1124
GMET269799 GMET_0883GMET_0066GMET_3339GMET_2328GMET_2327GMET_1777GMET_2673
GKAU235909 GK1172GK1173GK1172GK1165GK1167GK1186GK1169
FNUC190304 FN1489FN1489FN2034FN2033FN1660FN0711
ESP42895 ENT638_2077ENT638_3720ENT638_3719ENT638_0095ENT638_0091ENT638_0087ENT638_0100
EFER585054 EFER_0914EFER_3272EFER_3271EFER_3936EFER_3940EFER_3944EFER_3930
EFAE226185 EF_3123EF_3122EF_3123EF_3131EF_3127EF_3113
ECOO157 Z3513SUNFMTYICCGMKRECGDFP
ECOL83334 ECS3143ECS4154ECS4153ECS4519ECS4523ECS4527ECS4514
ECOL585397 ECED1_2721ECED1_3952ECED1_3951ECED1_4328ECED1_4332ECED1_4336ECED1_4323
ECOL585057 ECIAI39_2402ECIAI39_3783ECIAI39_3782ECIAI39_4163ECIAI39_4170ECIAI39_4174ECIAI39_4157
ECOL585056 ECUMN_2596ECUMN_3762ECUMN_3761ECUMN_4159ECUMN_4164ECUMN_4168ECUMN_4154
ECOL585055 EC55989_2501EC55989_3705EC55989_3704EC55989_4109EC55989_4114EC55989_4118EC55989_4104
ECOL585035 ECS88_2404ECS88_3676ECS88_3675ECS88_4058ECS88_4063ECS88_4067ECS88_4053
ECOL585034 ECIAI1_2331ECIAI1_3438ECIAI1_3437ECIAI1_3815ECIAI1_3820ECIAI1_3824ECIAI1_3810
ECOL481805 ECOLC_1394ECOLC_0425ECOLC_0426ECOLC_0067ECOLC_0063ECOLC_0059ECOLC_0072
ECOL469008 ECBD_1404ECBD_0463ECBD_0464ECBD_0082ECBD_0077ECBD_0073ECBD_0087
ECOL439855 ECSMS35_2409ECSMS35_3584ECSMS35_3583ECSMS35_3979ECSMS35_3983ECSMS35_3987ECSMS35_3974
ECOL413997 ECB_02181ECB_03139ECB_03138ECB_03501ECB_03505ECB_03509ECB_03496
ECOL409438 ECSE_2514ECSE_3563ECSE_3562ECSE_3924ECSE_3930ECSE_3934ECSE_3919
ECOL405955 APECO1_4306APECO1_3158APECO1_3159APECO1_2817APECO1_2813APECO1_2809APECO1_2822
ECOL364106 UTI89_C2537UTI89_C3733UTI89_C3732UTI89_C4188UTI89_C4193UTI89_C4197UTI89_C4183
ECOL362663 ECP_2298ECP_3376ECP_3375ECP_3742ECP_3746ECP_3750ECP_3737
ECOL331111 ECE24377A_2550ECE24377A_3771ECE24377A_3770ECE24377A_4145ECE24377A_4151ECE24377A_4156ECE24377A_4140
ECOL316407 ECK2248:JW2249:B2255ECK3275:JW3250:B3289ECK3274:JW3249:B3288ECK3634:JW3619:B3644ECK3638:JW3623:B3648ECK3642:JW3627:B3652ECK3629:JW5642:B3639
ECOL199310 C2797C4049C4048C4468C4473C4477C4463
ECAR218491 ECA3144ECA4001ECA4000ECA0130ECA0040ECA0036ECA0144
DSHI398580 DSHI_3033DSHI_0181DSHI_1528DSHI_1529DSHI_1510DSHI_2976
DRED349161 DRED_1705DRED_1707DRED_1705DRED_1698DRED_1700DRED_2088DRED_1702
DPSY177439 DP0747DP0124DP0747DP2862DP2860DP1673
DOLE96561 DOLE_2232DOLE_2231DOLE_2232DOLE_1912DOLE_1910DOLE_1592
DNOD246195 DNO_0158DNO_0157DNO_0665DNO_0645DNO_1018DNO_0823
DHAF138119 DSY2693DSY2692DSY2693DSY2731DSY2729DSY2674DSY2727
DARO159087 DARO_0028DARO_0022DARO_3848DARO_3845DARO_0356DARO_3141
CVIO243365 CV_0747CV_4262CV_4264CV_3850CV_3770CV_0933CV_3080
CTET212717 CTC_01222CTC_01220CTC_01215CTC_01216CTC_01231CTC_01217
CSP78 CAUL_4779CAUL_4568CAUL_2522CAUL_2523CAUL_2912CAUL_5070
CSP501479 CSE45_0078CSE45_0078CSE45_1805CSE45_1806CSE45_1363CSE45_4341
CSAL290398 CSAL_2869CSAL_2868CSAL_3207CSAL_3233CSAL_3245CSAL_2981
CPSY167879 CPS_0018CPS_0019CPS_0107CPS_4971CPS_4976CPS_0182
CPER289380 CPR_1714CPR_1712CPR_1714CPR_1721CPR_1719CPR_1717
CPER195103 CPF_1996CPF_1994CPF_1996CPF_2003CPF_2001CPF_1984CPF_1999
CPER195102 CPE1743CPE1741CPE1743CPE1750CPE1748CPE1731CPE1746
CNOV386415 NT01CX_2244NT01CX_2242NT01CX_2244NT01CX_2251NT01CX_2249NT01CX_2247
CJAP155077 CJA_3580CJA_3581CJA_0202CJA_3569CJA_3491CJA_3523
CHYD246194 CHY_1481CHY_1483CHY_1490CHY_1488CHY_1468CHY_1486
CDIF272563 CD2584CD2581CD2584CD2589CD2588CD2560CD2587
CDES477974 DAUD_1592DAUD_1591DAUD_1592DAUD_1599DAUD_1597DAUD_1595
CBUR434922 COXBU7E912_2096COXBU7E912_0205COXBU7E912_2096COXBU7E912_1781COXBU7E912_1780COXBU7E912_1776COXBU7E912_0950
CBUR360115 COXBURSA331_A0090COXBURSA331_A2118COXBURSA331_A0090COXBURSA331_A0406COXBURSA331_A0407COXBURSA331_A0411COXBURSA331_A1061
CBUR227377 CBU_1997CBU_1915CBU_1997CBU_0300CBU_0301CBU_0305CBU_0886
CBOT536232 CLM_2809CLM_2807CLM_2809CLM_2816CLM_2814CLM_2795CLM_2812
CBOT515621 CLJ_B2739CLJ_B2737CLJ_B2739CLJ_B2746CLJ_B2744CLJ_B2725CLJ_B2742
CBOT508765 CLL_A1216CLL_A1218CLL_A1216CLL_A1209CLL_A1211CLL_A1228CLL_A1213
CBOT498213 CLD_2128CLD_2130CLD_2128CLD_2121CLD_2123CLD_2142CLD_2125
CBOT441772 CLI_2570CLI_2568CLI_2570CLI_2577CLI_2575CLI_2556CLI_2573
CBOT441771 CLC_2364CLC_2362CLC_2364CLC_2371CLC_2369CLC_2350CLC_2367
CBOT441770 CLB_2382CLB_2380CLB_2382CLB_2389CLB_2387CLB_2368CLB_2385
CBOT36826 CBO2509CBO2507CBO2509CBO2515CBO2513CBO2496CBO2512
CBEI290402 CBEI_1146CBEI_1148CBEI_1146CBEI_1139CBEI_1141CBEI_1158CBEI_1143
CAULO CC0279CC0102CC0279CC1680CC1681CC1437CC3712
CACE272562 CAC1723CAC1725CAC1723CAC1716CAC1718CAC1736CAC1720
BWEI315730 BCERKBAB4_3689BCERKBAB4_3688BCERKBAB4_3689BCERKBAB4_3696BCERKBAB4_3678BCERKBAB4_3692
BVIE269482 BCEP1808_1789BCEP1808_3282BCEP1808_3285BCEP1808_0915BCEP1808_0916BCEP1808_0685BCEP1808_2592
BTHU412694 BALH_3497BALH_3496BALH_3497BALH_3504BALH_3486BALH_3500
BTHU281309 BT9727_3607BT9727_3606BT9727_3607BT9727_3614BT9727_3596BT9727_3610
BTHA271848 BTH_I2190BTH_I0132BTH_I0129BTH_I1585BTH_I1586BTH_I1280BTH_I0768
BSUI470137 BSUIS_B1292BSUIS_B1029BSUIS_A0489BSUIS_A0490BSUIS_B0577BSUIS_B1059
BSUI204722 BR_1814BR_A1034BR_0463BR_0464BR_A0581BR_A1064
BSUB BSU15730BSU15740BSU15730BSU15660BSU15680BSU15870BSU15700
BSP376 BRADO2062BRADO0340BRADO0771BRADO3316BRADO3317BRADO3769BRADO0077
BSP36773 BCEP18194_A5163BCEP18194_A6474BCEP18194_A6477BCEP18194_A4106BCEP18194_A4107BCEP18194_A3812BCEP18194_A5846
BPUM315750 BPUM_1472BPUM_1473BPUM_1472BPUM_1465BPUM_1467BPUM_1486BPUM_1469
BPSE320373 BURPS668_2240BURPS668_0155BURPS668_0151BURPS668_2950BURPS668_2949BURPS668_3325BURPS668_0965
BPSE320372 BURPS1710B_A2606BURPS1710B_A0374BURPS1710B_A0369BURPS1710B_A3307BURPS1710B_A3306BURPS1710B_A3643BURPS1710B_A1179
BPSE272560 BPSL0122BPSL0125BPSL0122BPSL2564BPSL2563BPSL2867BPSL0904
BPET94624 BPET4711BPET4726BPET2267BPET2248BPET2290BPET2816
BPER257313 BP0569BP0551BP1587BP1578BP1612BP1751
BPAR257311 BPP0259BPP0244BPP2996BPP3005BPP2973BPP1982
BMEL359391 BAB1_1822BAB2_0996BAB1_0488BAB1_0489BAB2_0659BAB2_1024
BMEL224914 BMEI0235BMEII0265BMEI1470BMEI1469BMEII0686BMEII0235
BMAL320389 BMA10247_1155BMA10247_2357BMA10247_2353BMA10247_1965BMA10247_1964BMA10247_2575BMA10247_2114
BMAL320388 BMASAVP1_A1883BMASAVP1_A2801BMASAVP1_A2805BMASAVP1_A0814BMASAVP1_A0815BMASAVP1_A0306BMASAVP1_A2660
BMAL243160 BMA_1393BMA_0146BMA_0143BMA_2097BMA_2096BMA_2389BMA_2244
BLIC279010 BL02298BL02299BL02298BL02291BL02293BL02311BL02295
BJAP224911 BLR0579BLL8108BLR4087BLR4088BLR4603BLL0759
BHEN283166 BH00750BH15990BH00750BH05390BH09860BH00380
BHAL272558 BH2508BH2507BH2508BH2514BH2512BH2495BH2510
BCER572264 BCA_3966BCA_3965BCA_3966BCA_3973BCA_3955BCA_3969
BCER405917 BCE_3908BCE_3907BCE_3908BCE_3916BCE_3897BCE_3912
BCER315749 BCER98_2518BCER98_2517BCER98_2518BCER98_2525BCER98_2523BCER98_2507BCER98_2521
BCER288681 BCE33L3625BCE33L3624BCE33L3625BCE33L3632BCE33L3614BCE33L3628
BCER226900 BC_3864BC_3863BC_3864BC_3871BC_3853BC_3867
BCEN331272 BCEN2424_1862BCEN2424_3123BCEN2424_3126BCEN2424_0998BCEN2424_0999BCEN2424_0724BCEN2424_2514
BCEN331271 BCEN_6217BCEN_2509BCEN_2512BCEN_0519BCEN_0520BCEN_0240BCEN_1903
BCAN483179 BCAN_A1852BCAN_B1054BCAN_A0468BCAN_A0469BCAN_B0581BCAN_B1086
BBRO257310 BB0262BB0248BB2962BB2971BB2939BB2170
BANT592021 BAA_4028BAA_4027BAA_4028BAA_4035BAA_4033BAA_4017BAA_4031
BANT568206 BAMEG_0627BAMEG_0628BAMEG_0627BAMEG_0620BAMEG_0638BAMEG_0624
BANT261594 GBAA4004GBAA4003GBAA4004GBAA4011GBAA3993GBAA4007
BANT260799 BAS3717BAS3716BAS3717BAS3724BAS3706BAS3720
BAMY326423 RBAM_015560RBAM_015570RBAM_015560RBAM_015490RBAM_015510RBAM_015700RBAM_015530
BAMB398577 BAMMC406_1772BAMMC406_3061BAMMC406_3064BAMMC406_0870BAMMC406_0871BAMMC406_0639BAMMC406_2432
BAMB339670 BAMB_1800BAMB_3178BAMB_3181BAMB_0858BAMB_0859BAMB_0614BAMB_2561
BABO262698 BRUAB1_1794BRUAB2_0974BRUAB1_0485BRUAB1_0486BRUAB2_0643BRUAB2_1004
ASP76114 EBA2954EBA2833EBA2954C1A25EBA3494EBA2297EBA838
ASP62928 AZO0100AZO3985AZO0100AZO3960AZO3953AZO0477AZO1138
ASP232721 AJS_3894AJS_4053AJS_0926AJS_0947AJS_0376AJS_1001
ASAL382245 ASA_3309ASA_4142ASA_4141ASA_0100ASA_0036ASA_4113ASA_4230
APLE434271 APJL_1588APJL_1620APJL_0056APJL_0264APJL_1863APJL_2016
APLE416269 APL_1560APL_1587APL_0056APL_0256APL_1827APL_1969
AORE350688 CLOS_1428CLOS_1431CLOS_1428CLOS_1421CLOS_1423CLOS_1441CLOS_1425
AMET293826 AMET_2785AMET_2782AMET_2785AMET_2792AMET_2790AMET_2770AMET_2788
AHYD196024 AHA_0990AHA_0256AHA_0257AHA_4225AHA_0041AHA_0284AHA_0159
AFER243159 AFE_3004AFE_3003AFE_3004AFE_2476AFE_2475AFE_2470AFE_2675
AEHR187272 MLG_2627MLG_2626MLG_2627MLG_2445MLG_2444MLG_2440MLG_2847
ADEH290397 ADEH_3969ADEH_3969ADEH_2607ADEH_2606ADEH_1727ADEH_2372
ACAU438753 AZC_0797AZC_4698AZC_0797AZC_4317AZC_4318AZC_1725AZC_3913
ABOR393595 ABO_0129ABO_0130ABO_0205ABO_0178ABO_0168ABO_0213
ABAU360910 BAV0228BAV0203BAV1937BAV1955BAV1920BAV1409
ABAC204669 ACID345_4228ACID345_4229ACID345_4228ACID345_3780ACID345_3778ACID345_4522ACID345_3776
AAVE397945 AAVE_4528AAVE_4690AAVE_3582AAVE_3583AAVE_0593AAVE_1328


Organism features enriched in list (features available for 287 out of the 305 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 2.351e-779112
Endospores:No 4.620e-1756211
Endospores:Yes 2.106e-64253
GC_Content_Range4:0-40 9.687e-1266213
GC_Content_Range4:40-60 0.0000191134224
GC_Content_Range4:60-100 0.000867687145
GC_Content_Range7:0-30 0.00562421547
GC_Content_Range7:30-40 7.136e-951166
GC_Content_Range7:50-60 8.631e-877107
GC_Content_Range7:60-70 0.000031886134
GC_Content_Range7:70-100 0.0058119111
Genome_Size_Range5:0-2 3.843e-438155
Genome_Size_Range5:4-6 1.044e-25148184
Genome_Size_Range9:1-2 4.087e-328128
Genome_Size_Range9:4-5 1.962e-107596
Genome_Size_Range9:5-6 1.274e-127388
Genome_Size_Range9:6-8 0.00273742738
Gram_Stain:Gram_Neg 2.398e-13207333
Gram_Stain:Gram_Pos 0.006112362150
Habitat:Host-associated 0.003066087206
Habitat:Multiple 0.0003045106178
Habitat:Specialized 0.00366971753
Habitat:Terrestrial 0.00073182431
Motility:No 1.177e-1336151
Motility:Yes 1.559e-14177267
Optimal_temp.:25-30 0.00021341719
Optimal_temp.:30-37 0.00229531518
Optimal_temp.:35-37 0.00008661313
Oxygen_Req:Anaerobic 0.001355137102
Oxygen_Req:Facultative 1.498e-10135201
Pathogenic_in:Animal 0.00047984566
Shape:Coccobacillus 0.00438041011
Shape:Coccus 0.00057372782
Shape:Rod 5.264e-22227347
Shape:Sphere 0.0003443219
Shape:Spiral 0.0000146534
Temp._range:Hyperthermophilic 0.0000302223
Temp._range:Mesophilic 0.0004802248473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 138
Effective number of orgs (counting one per cluster within 468 clusters): 114

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSOL273057 ncbi Sulfolobus solfataricus P20
SMAR399550 ncbi Staphylothermus marinus F11
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT31
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE51
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.1
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS1
MSP164757 ncbi Mycobacterium sp. JLS1
MSP164756 ncbi Mycobacterium sp. MCS1
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-21
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN1
MKAN190192 ncbi Methanopyrus kandleri AV191
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54561
HACI382638 ncbi Helicobacter acinonychis Sheeba0
FSP106370 ncbi Frankia sp. CcI31
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake1
DRAD243230 ncbi Deinococcus radiodurans R11
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138261
CCAV227941 ncbi Chlamydophila caviae GPIC0
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BLON206672 ncbi Bifidobacterium longum NCC27051
BGAR290434 ncbi Borrelia garinii PBi1
BBUR224326 ncbi Borrelia burgdorferi B311
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.1
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40180
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  G7168   EG12163   EG11268   EG11192   EG10965   EG10829   EG10004   
WSUC273121 WS0188
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TPEN368408
TPAL243276 TP_0687
TKOD69014 TK1935
TDEN326298
TACI273075
STOK273063
SSP387093 SUN_2210
SSOL273057
SMAR399550 SMAR_0376
SACI330779
RBEL391896 A1I_07245
RAKA293614 A1C_05985
PTOR263820
PMAR167540 PMM0426
PISL384616
PHOR70601 PH0851
PFUR186497 PF0666
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844 PAB0830
NSP387092
NSP35761 NOCA_2438
NSEN222891 NSE_0726
NPHA348780
MTUB419947 MRA_1400
MTUB336982 TBFG_11420
MTHE349307
MTHE187420
MTBRV RV1391
MTBCDC MT1436
MSYN262723
MSTA339860
MSP189918 MKMS_2419
MSP164757 MJLS_2413
MSP164756 MMCS_2372
MSED399549
MPUL272635
MPNE272634
MPEN272633 MYPE500
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631 ML0543
MKAN190192 MK1539
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054 MFLV_3738
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBOV410289 BCG_1452
MBOV233413 MB1426
MBAR269797
MAVI243243 MAV_3383
MART243272
MAEO419665
MACE188937
LINT267671 LIC_13150
LINT189518 LA3944
LBIF456481 LEPBI_I0349
LBIF355278 LBF_0338
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HHEP235279
HBUT415426 HBUT_0511
HACI382638
FSP106370 FRANCCI3_3193
ERUM302409
ERUM254945
ECHA205920 ECH_0322
ECAN269484 ECAJ_0681
DRAD243230 DR_1916
CTRA471473
CTRA471472
CSUL444179
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CMUR243161 TC_0817
CMET456442
CMAQ397948
CKOR374847
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CHOM360107
CFET360106
CFEL264202
CCUR360105
CCON360104 CCC13826_0545
CCAV227941
CABO218497
BXEN266265
BLON206672 BL1789
BGAR290434 BG0843
BBUR224326 BB_0818
BAPH372461
BAFZ390236 BAPKO_0871
AYEL322098
AURANTIMONAS
ASP1667 ARTH_2257
APHA212042 APH_0170
APER272557
ANAE240017
AMAR234826
ALAI441768 ACL_0304
AFUL224325
ABUT367737
AAUR290340


Organism features enriched in list (features available for 130 out of the 138 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00305041192
Arrangment:Pairs 9.068e-69112
Arrangment:Singles 0.000430180286
Disease:Pharyngitis 5.149e-688
Disease:bronchitis_and_pneumonitis 5.149e-688
Endospores:No 1.964e-1383211
GC_Content_Range4:0-40 0.000279164213
GC_Content_Range4:60-100 0.008826423145
GC_Content_Range7:0-30 0.00001772347
GC_Content_Range7:50-60 0.001629113107
Genome_Size_Range5:0-2 1.854e-2280155
Genome_Size_Range5:2-4 0.001021230197
Genome_Size_Range5:4-6 1.381e-718184
Genome_Size_Range5:6-10 0.0004386247
Genome_Size_Range9:0-1 5.286e-92027
Genome_Size_Range9:1-2 7.303e-1360128
Genome_Size_Range9:3-4 0.0023089877
Genome_Size_Range9:4-5 0.00164251196
Genome_Size_Range9:5-6 0.0000981788
Genome_Size_Range9:6-8 0.0005661138
Gram_Stain:Gram_Neg 0.000102456333
Gram_Stain:Gram_Pos 0.000292919150
Habitat:Host-associated 0.000177163206
Habitat:Multiple 4.069e-816178
Habitat:Specialized 0.00051882253
Optimal_temp.:37 0.000071539106
Optimal_temp.:85 0.002384244
Oxygen_Req:Anaerobic 0.000374336102
Oxygen_Req:Facultative 1.207e-721201
Oxygen_Req:Microaerophilic 0.00004611218
Salinity:Extreme_halophilic 0.006689557
Shape:Irregular_coccus 7.503e-91517
Shape:Pleomorphic 0.001935668
Shape:Rod 3.239e-1243347
Shape:Sphere 8.670e-91619
Shape:Spiral 6.026e-102434
Temp._range:Hyperthermophilic 9.310e-81723
Temp._range:Mesophilic 0.000408692473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 2
Effective number of orgs (counting one per cluster within 468 clusters): 1

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CBUR360115 ncbi Coxiella burnetii RSA 331 0.00816859977
CBUR227377 ncbi Coxiella burnetii RSA 493 0.009008710117


Names of the homologs of the genes in the group in each of these orgs
  G7168   EG12163   EG11268   EG11192   EG10965   EG10829   EG10004   
CBUR360115 COXBURSA331_A0090COXBURSA331_A2118COXBURSA331_A0090COXBURSA331_A0406COXBURSA331_A0407COXBURSA331_A0411COXBURSA331_A1061
CBUR227377 CBU_1997CBU_1915CBU_1997CBU_0300CBU_0301CBU_0305CBU_0886


Organism features enriched in list (features available for 2 out of the 2 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Q_fever 5.894e-622
Shape:Coccobacillus 0.0003242211



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951730.5369
GLYCOCAT-PWY (glycogen degradation I)2461990.5161
PWY-5918 (heme biosynthesis I)2722100.4975
CENTFERM-PWY (acetyl-CoA fermentation to butyrate I)2081740.4914
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491380.4897
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181790.4866
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862150.4832
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002190.4635
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251780.4535
THISYN-PWY (thiamin biosynthesis I)5023000.4402
P163-PWY (lysine fermentation to acetate and butyrate)3672470.4394
TYRFUMCAT-PWY (tyrosine degradation I)1841520.4358
PWY-5194 (siroheme biosynthesis)3122200.4319
PWY0-862 (cis-dodecenoyl biosynthesis)3432340.4265
PWY-5386 (methylglyoxal degradation I)3052150.4219
PWY-5028 (histidine degradation II)1301170.4216
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761450.4196
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831490.4188
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3002120.4185
METSYN-PWY (homoserine and methionine biosynthesis)3972570.4184
PWY-6196 (serine racemization)102980.4171
PWY-4041 (γ-glutamyl cycle)2792010.4159
PWY0-381 (glycerol degradation I)4172650.4153
VALDEG-PWY (valine degradation I)2902060.4122
PWY-5964 (molybdopterin guanine dinucleotide biosynthesis)2902060.4122
PWY-6317 (galactose degradation I (Leloir pathway))4642830.4113
ARO-PWY (chorismate biosynthesis I)5102990.4110
HOMOSER-METSYN-PWY (methionine biosynthesis I)4192650.4097
MET-SAM-PWY (superpathway of S-adenosyl-L-methionine biosynthesis)3922530.4061
PWY-1269 (CMP-KDO biosynthesis I)3252220.4043
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262220.4012
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222650.4011
AST-PWY (arginine degradation II (AST pathway))1201080.4010



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12163   EG11268   EG11192   EG10965   EG10829   EG10004   
G71680.9997930.999910.9986190.9992670.9985040.999156
EG121630.9999450.9986090.9991060.9986120.999306
EG112680.9987570.9991480.9986180.999381
EG111920.9999410.99940.9995
EG109650.9995550.999488
EG108290.998884
EG10004



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PAIRWISE BLAST SCORES:

  G7168   EG12163   EG11268   EG11192   EG10965   EG10829   EG10004   
G71680.0f0-2.3e-31----
EG12163-0.0f0-----
EG11268--0.0f0----
EG11192---0.0f0---
EG10965----0.0f0--
EG10829-----0.0f0-
EG10004------0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG11268 EG12163 (centered at EG12163)
EG10004 (centered at EG10004)
EG10829 (centered at EG10829)
EG10965 (centered at EG10965)
EG11192 (centered at EG11192)
G7168 (centered at G7168)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7168   EG12163   EG11268   EG11192   EG10965   EG10829   EG10004   
306/623396/623410/623327/623416/623419/623419/623
AAEO224324:0:Tyes--9600-90528
AAVE397945:0:Tyes-38684028293629370722
ABAC204669:0:Tyes460461460427600
ABAU360910:0:Tyes-2501733175017161208
ABOR393595:0:Tyes-0176493984
ACAU438753:0:Tyes039570356735689413152
ACEL351607:0:Tyes-----2890
ACRY349163:8:Tyes-2252010351034-1315
ADEH290397:0:Tyes2264-22648888870648
AEHR187272:0:Tyes187186187540407
AFER243159:0:Tyes528527528650201
AHYD196024:0:Tyes91820020140300228109
ALAI441768:0:Tyes----0--
AMAR329726:9:Tyes-5446--532950620
AMET293826:0:Tyes1411142119017
AORE350688:0:Tyes710702204
APHA212042:0:Tyes----0--
APLE416269:0:Tyes-15411569021018191957
APLE434271:0:Tno-15401573021218261979
ASAL382245:5:Tyes31483960395958039324044
ASP1667:3:Tyes------0
ASP232721:2:Tyes-342435905425630617
ASP62928:0:Tyes039470392239153821064
ASP62977:0:Tyes-466465-1881110
ASP76114:2:Tyes12401167124086215528430
AVAR240292:3:Tyes-2958--05872342
BABO262698:0:Tno--303--0332
BABO262698:1:Tno-1260-01--
BAFZ390236:2:Fyes---0---
BAMB339670:3:Tno12132619262224824901999
BAMB398577:3:Tno11442451245422923001821
BAMY326423:0:Tyes78702214
BANT260799:0:Tno11101118-014
BANT261594:2:Tno11101118-014
BANT568206:2:Tyes7870-184
BANT592021:2:Tno1110111816014
BAPH198804:0:Tyes62-62-0--
BBAC264462:0:Tyes--11090-711-
BBAC360095:0:Tyes-01162-4086441190
BBRO257310:0:Tyes-1402733274227101947
BBUR224326:21:Fno---0---
BCAN483179:0:Tno--444--0476
BCAN483179:1:Tno-1334-01--
BCEN331271:0:Tno0------
BCEN331271:2:Tno-2294229728128201688
BCEN331272:3:Tyes11362394239727427501787
BCER226900:1:Tyes11101118-014
BCER288681:0:Tno11101118-014
BCER315749:1:Tyes1110111816014
BCER405917:1:Tyes11101119-015
BCER572264:1:Tno11101118-014
BCIC186490:0:Tyes--276600263
BCLA66692:0:Tyes131213--015
BFRA272559:1:Tyes810-810643-8670
BFRA295405:0:Tno932-932734-9900
BGAR290434:2:Fyes---0---
BHAL272558:0:Tyes1312131917015
BHEN283166:0:Tyes33143833-4778950
BHER314723:0:Fyes---6--0
BJAP224911:0:Fyes-07578352735284049183
BLIC279010:0:Tyes78702214
BLON206672:0:Tyes--0----
BMAL243160:1:Tno1115301735173420041867
BMAL320388:1:Tno15472439244350250302300
BMAL320389:1:Tyes0117111677867851387932
BMEL224914:0:Tno--31--4590
BMEL224914:1:Tno-0-12651264--
BMEL359391:0:Tno--300--0328
BMEL359391:1:Tno-1220-01--
BOVI236:0:Tyes--370--0397
BOVI236:1:Tyes-1144--0--
BPAR257311:0:Tno-150-262725961660
BPER257313:0:Tyes-1709359269571077
BPET94624:0:Tyes-2497251219042573
BPSE272560:1:Tyes030245624552762784
BPSE320372:1:Tno221450281528143147805
BPSE320373:1:Tno202740269626953059792
BPUM315750:0:Tyes78702214
BQUI283165:0:Tyes--33-3856540
BSP107806:2:Tyes--63-0--
BSP36773:2:Tyes13722706270929629702075
BSP376:0:Tyes18752496453068306934960
BSUB:0:Tyes78702214
BSUI204722:0:Tyes--428--0458
BSUI204722:1:Tyes-1307-01--
BSUI470137:0:Tno-677421--0450
BSUI470137:1:Tno---01--
BTHA271848:1:Tno202630144014411140636
BTHE226186:0:Tyes2632-2632658-26110
BTHU281309:1:Tno11101118-014
BTHU412694:1:Tno11101118-014
BTRI382640:1:Tyes-198533-69011860
BTUR314724:0:Fyes---6--0
BVIE269482:7:Tyes10962575257822923001890
BWEI315730:4:Tyes11101118-014
CACE272562:1:Tyes79702204
CAULO:0:Tyes17801781601160213573664
CBEI290402:0:Tyes79702194
CBLO203907:0:Tyes--0393395--
CBLO291272:0:Tno--0407409-405
CBOT36826:1:Tno1412142119017
CBOT441770:0:Tyes1412142119017
CBOT441771:0:Tno1412142119017
CBOT441772:1:Tno1412142119017
CBOT498213:1:Tno1412142119017
CBOT508765:1:Tyes79702194
CBOT515621:2:Tyes1412142119017
CBOT536232:0:Tno1412142119017
CBUR227377:1:Tyes163215521632015562
CBUR360115:1:Tno019190296297301910
CBUR434922:2:Tno180701807151215111507712
CCHL340177:0:Tyes166795-1136-01298
CCON360104:2:Tyes----0--
CDES477974:0:Tyes10186-4
CDIF272563:1:Tyes2522253130028
CDIP257309:0:Tyes10----5
CEFF196164:0:Fyes-0----6
CGLU196627:0:Tyes10-----
CHUT269798:0:Tyes1410-14100-34872827
CHYD246194:0:Tyes-13152220018
CJAP155077:0:Tyes-331233130330132233255
CJEI306537:0:Tyes787-----0
CKLU431943:1:Tyes-970--4
CMIC31964:2:Tyes-----01226
CMIC443906:2:Tyes-----0438
CMUR243161:1:Tyes0------
CNOV386415:0:Tyes20297-5
CPEL335992:0:Tyes----312-0
CPER195102:1:Tyes1210121917015
CPER195103:0:Tno1210121917015
CPER289380:3:Tyes20297-5
CPHY357809:0:Tyes0-0388-397-
CPRO264201:0:Fyes0-0262---
CPSY167879:0:Tyes-017548124817150
CRUT413404:0:Tyes-0530-325669543
CSAL290398:0:Tyes-10343369381112
CSP501479:6:Fyes------0
CSP501479:8:Fyes0-0170017011268-
CSP78:2:Tyes-22862074013962578
CTEP194439:0:Tyes1226391-38-13460
CTET212717:0:Tyes-7501162
CVES412965:0:Tyes--195-0308207
CVIO243365:0:Tyes036253627318831081882386
DARO159087:0:Tyes-60386138583443151
DDES207559:0:Tyes0-02750--25
DETH243164:0:Tyes--1161--8060
DGEO319795:1:Tyes-----01171
DHAF138119:0:Tyes1918195755053
DNOD246195:0:Tyes-10497477831647
DOLE96561:0:Tyes650649650323321-0
DPSY177439:2:Tyes646064628112809-1595
DRAD243230:3:Tyes-----0-
DRED349161:0:Tyes797023844
DSHI398580:5:Tyes-289201370137113522834
DSP216389:0:Tyes--1014--6960
DSP255470:0:Tno--1186--7080
DVUL882:1:Tyes2454-24540--2442
ECAN269484:0:Tyes----0--
ECAR218491:0:Tyes3135402440239340107
ECHA205920:0:Tyes----0--
ECOL199310:0:Tno0123012291647165216561642
ECOL316407:0:Tno0171717181359135513511363
ECOL331111:6:Tno0116611651535154015441530
ECOL362663:0:Tno0108710861446145014541441
ECOL364106:1:Tno0118911881641164616501636
ECOL405955:2:Tyes0114011391491149514991486
ECOL409438:6:Tyes0107910781441144714511436
ECOL413997:0:Tno09819801338134213461333
ECOL439855:4:Tno0111811171511151515191506
ECOL469008:0:Tno134738338494014
ECOL481805:0:Tno135136136284013
ECOL585034:0:Tno0108910881458146214661453
ECOL585035:0:Tno0123812371610161416181605
ECOL585055:0:Tno0118711861578158215861573
ECOL585056:2:Tno0116611651553155715611548
ECOL585057:0:Tno0140314021770177617801764
ECOL585397:0:Tno0121512141573157615801568
ECOL83334:0:Tno0104710461413141714211408
ECOLI:0:Tno0104710461410141414181405
ECOO157:0:Tno0105810571437144114451432
EFAE226185:3:Tyes1091016130-
EFER585054:1:Tyes0234923482990299229962984
ELIT314225:0:Tyes-18730-1526623-
ESP42895:1:Tyes20153673367284013
FALN326424:0:Tyes-----5660
FJOH376686:0:Tyes0--612-28363362
FMAG334413:1:Tyes---02-4
FNOD381764:0:Tyes---6676650459
FNUC190304:0:Tyes1958-195837437301180
FPHI484022:1:Tyes-8831368-140601457
FRANT:0:Tno-4260-511627194
FSP106370:0:Tyes------0
FSP1855:0:Tyes4152-----0
FSUC59374:0:Tyes2403-23230425-780
FTUL351581:0:Tno--659-7460246
FTUL393011:0:Tno--610-6810238
FTUL393115:0:Tyes-4130-496610193
FTUL401614:0:Tyes-1004463-3530786
FTUL418136:0:Tno-149435-2700731
FTUL458234:0:Tno--618-6950249
GBET391165:0:Tyes-1597534-2048-0
GFOR411154:0:Tyes2635--2783-16810
GKAU235909:1:Tyes78702214
GMET269799:1:Tyes819032782273227217152611
GOXY290633:5:Tyes-15271765-92802428
GSUL243231:0:Tyes032250209720961188987
GTHE420246:1:Tyes78702204
GURA351605:0:Tyes349006252955295416682729
GVIO251221:0:Tyes914-563--0-
HARS204773:0:Tyes-13018821883169670
HAUR316274:2:Tyes4583-4583--04577
HBUT415426:0:Tyes-0-----
HCHE349521:0:Tyes101609560756069955
HDUC233412:0:Tyes-14771506013361412380
HHAL349124:0:Tyes1362136113628901339
HINF281310:0:Tyes-122123013051302492
HINF374930:0:Tyes-1486148704654681139
HINF71421:0:Tno-155154012561253483
HMOD498761:0:Tyes9-903265
HNEP81032:0:Tyes0-01614161314502706
HSOM205914:1:Tyes-01126014241421103
HSOM228400:0:Tno-194719483245435460
ILOI283942:0:Tyes101245824192411223
JSP290400:1:Tyes-36150198819872052441
JSP375286:0:Tyes014012091208212699
KPNE272620:2:Tyes16110324328332313
KRAD266940:2:Fyes--2949--02943
LACI272621:0:Tyes357-357-3603460
LBIF355278:2:Tyes-----0-
LBIF456481:2:Tno-----0-
LBOR355276:1:Tyes----0760-
LBOR355277:1:Tno----10680-
LBRE387344:2:Tyes10910--012
LCAS321967:1:Tyes109--14012
LCHO395495:0:Tyes03683036037912342321
LDEL321956:0:Tyes0-0-3--
LDEL390333:0:Tyes0-0-3--
LGAS324831:0:Tyes343-0-492
LHEL405566:0:Tyes308-308--2970
LINN272626:1:Tno1211121716014
LINT189518:1:Tyes-----0-
LINT267671:1:Tno-----0-
LINT363253:3:Tyes--4550---
LJOH257314:0:Tyes589588589-592-0
LLAC272622:5:Tyes0---7--
LLAC272623:0:Tyes0---6--
LMES203120:1:Tyes956955--11500665
LMON169963:0:Tno1211121716014
LMON265669:0:Tyes1211121716014
LPLA220668:0:Tyes454-0142
LPNE272624:0:Tno5825815821023477
LPNE297245:1:Fno5325315321023423
LPNE297246:1:Fyes6556546551023559
LPNE400673:0:Tno0109289279511412
LREU557436:0:Tyes109--14012
LSAK314315:0:Tyes454-0142
LSPH444177:1:Tyes6760129-
LWEL386043:0:Tyes1211121716014
LXYL281090:0:Tyes-----0123
MABS561007:1:Tyes0----1020562
MAER449447:0:Tyes-4087--04652-
MAQU351348:2:Tyes1015025845903484
MAVI243243:0:Tyes------0
MBOV233413:0:Tno------0
MBOV410289:0:Tno------0
MCAP243233:0:Tyes7827837829579080724
MEXT419610:0:Tyes-011051471147236223389
MFLA265072:0:Tyes140138140026268
MGIL350054:3:Tyes------0
MKAN190192:0:Tyes-0-----
MLAB410358:0:Tyes0-0----
MLEP272631:0:Tyes------0
MLOT266835:2:Tyes-253131155580558101794
MMAG342108:0:Tyes95095600601232055
MMAR394221:0:Tyes0246607737741040-
MPEN272633:0:Tyes0------
MPET420662:1:Tyes120122430243734582292
MSME246196:0:Tyes0-----3017
MSP164756:1:Tno------0
MSP164757:0:Tno------0
MSP189918:2:Tyes------0
MSP266779:3:Tyes-304001383138213233680
MSP400668:0:Tyes-01440944314437601
MSP409:2:Tyes12290122922822732523190
MSUC221988:0:Tyes-201520140154215391745
MTBCDC:0:Tno------0
MTBRV:0:Tno------0
MTHE264732:0:Tyes81080-333
MTUB336982:0:Tno------0
MTUB419947:0:Tyes------0
MVAN350058:0:Tyes-----0510
MXAN246197:0:Tyes0203183318219282887
NARO279238:0:Tyes-25492342-41614090
NEUR228410:0:Tyes51551651510248063930
NEUT335283:2:Tyes10119512201151390
NFAR247156:2:Tyes-----5880
NGON242231:0:Tyes-16121613158108501082
NHAM323097:2:Tyes-14935262226222519280
NMEN122586:0:Tno-10583149516151492
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