CANDIDATE ID: 367

CANDIDATE ID: 367

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9908780e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G6344 (citC) (b0618)
   Products of gene:
     - CITC-MONOMER (citrate lyase synthetase)
       Reactions:
        a [citrate (pro-3S)-lyase](thiol form) + acetate + ATP  =  a [citrate (pro-3S)-lyase](acetyl form) + diphosphate + AMP
         In pathways
         PWY-6038 (PWY-6038)

- G6343 (citD) (b0617)
   Products of gene:
     - ACECITLY-CPLX (citrate lyase)
       Reactions:
        citrate  =  acetate + oxaloacetate
        a [citrate (pro-3S)-lyase](acetyl form) + citrate  =  a [citrate (pro-3S)-lyase](citryl form) + a citryl-[acp] + acetate
         In pathways
         PWY-6038 (PWY-6038)
        a [citrate (pro-3S)-lyase](citryl form) + a citryl-[acp]  =  oxaloacetate + a [citrate (pro-3S)-lyase](acetyl form)
         In pathways
         PWY-6038 (PWY-6038)
     - ACPSUB-MONOMER (citrate lyase, acyl carrier γ subunit)
     - ACPSUB-CPLX (citrate lyase [acyl carrier protein] component)
     - CITLY-CPLX (citrate lyase, inactive)

- G6342 (citE) (b0616)
   Products of gene:
     - ACECITLY-CPLX (citrate lyase)
       Reactions:
        citrate  =  acetate + oxaloacetate
        a [citrate (pro-3S)-lyase](acetyl form) + citrate  =  a [citrate (pro-3S)-lyase](citryl form) + a citryl-[acp] + acetate
         In pathways
         PWY-6038 (PWY-6038)
        a [citrate (pro-3S)-lyase](citryl form) + a citryl-[acp]  =  oxaloacetate + a [citrate (pro-3S)-lyase](acetyl form)
         In pathways
         PWY-6038 (PWY-6038)
     - CITRYLY-MONOMER (citrate lyase, citryl-ACP lyase β subunit)
     - CITRYLY-CPLX (citrate lyase, citryl-ACP lyase component)
     - CITLY-CPLX (citrate lyase, inactive)

- G6341 (citF) (b0615)
   Products of gene:
     - ACECITLY-CPLX (citrate lyase)
       Reactions:
        citrate  =  acetate + oxaloacetate
        a [citrate (pro-3S)-lyase](acetyl form) + citrate  =  a [citrate (pro-3S)-lyase](citryl form) + a citryl-[acp] + acetate
         In pathways
         PWY-6038 (PWY-6038)
        a [citrate (pro-3S)-lyase](citryl form) + a citryl-[acp]  =  oxaloacetate + a [citrate (pro-3S)-lyase](acetyl form)
         In pathways
         PWY-6038 (PWY-6038)
     - CITTRANS-MONOMER (citrate lyase, citrate-ACP transferase α subunit)
     - CITTRANS-CPLX (citrate lyase, citrate-ACP transferase component)
     - CITLY-CPLX (citrate lyase, inactive)

- G6340 (citX) (b0614)
   Products of gene:
     - G6340-MONOMER (apo-citrate lyase phosphoribosyl-dephospho-CoA transferase)
       Reactions:
        2'-(5-triphosphoribosyl)-3'-dephospho-CoA + a citrate lyase apo-[acyl-carrier protein]  ->  a citrate lyase holo-[acyl-carrier protein] + diphosphate
         In pathways
         P2-PWY (2'-(5'-phosphoribosyl)-3'-dephospho-CoA biosynthesis I (citrate lyase))

- G6339 (citG) (b0613)
   Products of gene:
     - G6339-MONOMER (triphosphoribosyl-dephospho-CoA synthase)
       Reactions:
        dephospho-CoA + ATP  ->  2'-(5-triphosphoribosyl)-3'-dephospho-CoA + adenine
         In pathways
         P2-PWY (2'-(5'-phosphoribosyl)-3'-dephospho-CoA biosynthesis I (citrate lyase))
         PWY-5796 (PWY-5796)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 66
Effective number of orgs (counting one per cluster within 468 clusters): 34

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TDEN243275 ncbi Treponema denticola ATCC 354056
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
SSON300269 ncbi Shigella sonnei Ss0465
SPYO370554 ncbi Streptococcus pyogenes MGAS107506
SPYO370552 ncbi Streptococcus pyogenes MGAS102706
SPYO319701 ncbi Streptococcus pyogenes MGAS61806
SPYO293653 ncbi Streptococcus pyogenes MGAS50056
SPYO286636 ncbi Streptococcus pyogenes MGAS103946
SPYO198466 ncbi Streptococcus pyogenes MGAS3156
SPYO193567 ncbi Streptococcus pyogenes SSI-16
SPYO186103 ncbi Streptococcus pyogenes MGAS82326
SPYO160490 ncbi Streptococcus pyogenes M1 GAS6
SPRO399741 ncbi Serratia proteamaculans 5686
SMUT210007 ncbi Streptococcus mutans UA1596
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SFLE373384 ncbi Shigella flexneri 5 str. 84015
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SBOY300268 ncbi Shigella boydii Sb2276
RPAL316055 ncbi Rhodopseudomonas palustris BisA536
RFER338969 ncbi Rhodoferax ferrireducens T1186
PPRO298386 ncbi Photobacterium profundum SS95
LSAK314315 ncbi Lactobacillus sakei sakei 23K6
LPLA220668 ncbi Lactobacillus plantarum WCFS16
LHEL405566 ncbi Lactobacillus helveticus DPC 45716
LCAS321967 ncbi Lactobacillus casei ATCC 3346
LACI272621 ncbi Lactobacillus acidophilus NCFM6
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
HINF71421 ncbi Haemophilus influenzae Rd KW206
HINF374930 ncbi Haemophilus influenzae PittEE6
HINF281310 ncbi Haemophilus influenzae 86-028NP6
HDUC233412 ncbi Haemophilus ducreyi 35000HP6
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255866
ESP42895 Enterobacter sp.6
EFER585054 ncbi Escherichia fergusonii ATCC 354696
EFAE226185 ncbi Enterococcus faecalis V5836
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0735
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
CTET212717 ncbi Clostridium tetani E885
CPER289380 ncbi Clostridium perfringens SM1016
CPER195102 ncbi Clostridium perfringens 136
AMET293826 ncbi Alkaliphilus metalliredigens QYMF6


Names of the homologs of the genes in the group in each of these orgs
  G6344   G6343   G6342   G6341   G6340   G6339   
YENT393305 YE2653YE2652YE2651YE2650YE2649YE2648
VCHO345073 VC0395_A0323VC0395_A0324VC0395_A0325VC0395_A0326VC0395_A0327VC0395_A0328
VCHO VC0796VC0797VC0798VC0799VC0800VC0801
TDEN243275 TDE_1522TDE_1633TDE_1632TDE_1631TDE_1523TDE_1523
STYP99287 STM0624STM0623STM0622STM0621STM0620STM0619
SSON300269 SSO_0569SSO_0568SSO_0567SSO_0566SSO_0565
SPYO370554 MGAS10750_SPY1060MGAS10750_SPY1055MGAS10750_SPY1056MGAS10750_SPY1057MGAS10750_SPY1058MGAS10750_SPY1047
SPYO370552 MGAS10270_SPY1024MGAS10270_SPY1019MGAS10270_SPY1020MGAS10270_SPY1021MGAS10270_SPY1022MGAS10270_SPY1012
SPYO319701 M28_SPY0883M28_SPY0878M28_SPY0879M28_SPY0880M28_SPY0881M28_SPY0871
SPYO293653 M5005_SPY0910M5005_SPY0905M5005_SPY0906M5005_SPY0907M5005_SPY0908M5005_SPY0898
SPYO286636 M6_SPY0899M6_SPY0894M6_SPY0895M6_SPY0896M6_SPY0897M6_SPY0887
SPYO198466 SPYM3_0837SPYM3_0832SPYM3_0833SPYM3_0834SPYM3_0835SPYM3_0826
SPYO193567 SPS1037SPS1032SPS1033SPS1034SPS1035SPS1026
SPYO186103 SPYM18_1143SPYM18_1137SPYM18_1139SPYM18_1140SPYM18_1141SPYM18_1130
SPYO160490 SPY1192SPY1186SPY1188SPY1189SPY1190SPY1178
SPRO399741 SPRO_3171SPRO_3170SPRO_3169SPRO_3168SPRO_3167SPRO_3166
SMUT210007 SMU_1010SMU_1019SMU_1020SMU_1021SMU_1022SMU_1011
SHIGELLA CITCCITDCITECITFYBDUCITG
SFLE373384 SFV_0570SFV_0569SFV_0568SFV_0567SFV_0566
SENT454169 SEHA_C0737SEHA_C0736SEHA_C0735SEHA_C0065SEHA_C0733SEHA_C0732
SENT321314 SCH_0653SCH_0652SCH_0651SCH_0650SCH_0649SCH_0648
SENT295319 SPA2110SPA2111SPA2112SPA2113SPA2114SPA2115
SENT220341 STY0673STY0672STY0671STY0670STY0669STY0668
SENT209261 T2243T2244T2245T2246T2247T2248
SBOY300268 SBO_0483SBO_0482SBO_0481SBO_0480SBO_0479SBO_0478
RPAL316055 RPE_3427RPE_3428RPE_3429RPE_3430RPE_3431RPE_3432
RFER338969 RFER_2410RFER_2409RFER_2408RFER_2407RFER_2406RFER_2405
PPRO298386 PBPRA2295PBPRA2293PBPRA2292PBPRA2291PBPRA2290
LSAK314315 LSA1227LSA1226LSA1225LSA1224LSA1223LSA1220
LPLA220668 LP_1106LP_1107LP_1108LP_1109LP_1114LP_1093
LHEL405566 LHV_0987LHV_0988LHV_0989LHV_0990LHV_1314LHV_1673
LCAS321967 LSEI_1860LSEI_1859LSEI_1858LSEI_1857LSEI_1856LSEI_1853
LACI272621 LBA0914LBA0915LBA0916LBA0917LBA1232LBA1240
KPNE272620 GKPORF_B4306GKPORF_B4307GKPORF_B4308GKPORF_B4309GKPORF_B4335GKPORF_B4310
HINF71421 HI_0025HI_0024HI_0023HI_0022HI_0021HI_0021
HINF374930 CGSHIEE_03185CGSHIEE_03190CGSHIEE_03195CGSHIEE_03200CGSHIEE_03205CGSHIEE_03205
HINF281310 NTHI0032NTHI0031NTHI0030NTHI0029NTHI0028NTHI0028
HDUC233412 HD_1240HD_1241HD_1242HD_1243HD_1245HD_1245
FNUC190304 FN0319FN1378FN1379FN1380FN0318FN1377
ESP42895 ENT638_3375ENT638_3374ENT638_3373ENT638_3372ENT638_3371ENT638_3370
EFER585054 EFER_0032EFER_0033EFER_0034EFER_0035EFER_0036EFER_0037
EFAE226185 EF_3322EF_3321EF_3320EF_3319EF_3318EF_3315
ECOO157 CITCCITDCITECITFYBDUCITG
ECOL83334 ECS0657ECS0656ECS0655ECS0654ECS0653ECS0652
ECOL585397 ECED1_0615ECED1_0614ECED1_0613ECED1_0612ECED1_0611ECED1_0610
ECOL585057 ECIAI39_0594ECIAI39_0593ECIAI39_0592ECIAI39_0591ECIAI39_0590ECIAI39_0589
ECOL585056 ECUMN_0711ECUMN_0710ECUMN_0709ECUMN_0708ECUMN_0707ECUMN_0706
ECOL585055 EC55989_0610EC55989_0609EC55989_0608EC55989_0607EC55989_0606EC55989_0605
ECOL585035 ECS88_0659ECS88_0658ECS88_0657ECS88_0656ECS88_0655ECS88_0654
ECOL585034 ECIAI1_0602ECIAI1_0601ECIAI1_0600ECIAI1_0599ECIAI1_0598ECIAI1_0597
ECOL481805 ECOLC_3026ECOLC_3027ECOLC_3028ECOLC_3029ECOLC_3030ECOLC_3031
ECOL469008 ECBD_3034ECBD_3035ECBD_3036ECBD_3037ECBD_3038ECBD_3039
ECOL439855 ECSMS35_0637ECSMS35_0636ECSMS35_0635ECSMS35_0634ECSMS35_0633ECSMS35_0632
ECOL413997 ECB_00586ECB_00585ECB_00584ECB_00583ECB_00582ECB_00581
ECOL409438 ECSE_0686ECSE_0685ECSE_0684ECSE_0683ECSE_0682ECSE_0681
ECOL405955 APECO1_1434APECO1_1435APECO1_1436APECO1_1437APECO1_1438
ECOL364106 UTI89_C0622UTI89_C0621UTI89_C0620UTI89_C0618UTI89_C0616UTI89_C0615
ECOL362663 ECP_0649ECP_0648ECP_0647ECP_0646ECP_0645ECP_0644
ECOL331111 ECE24377A_0639ECE24377A_0638ECE24377A_0637ECE24377A_0636ECE24377A_0635
ECOL316407 ECK0611:JW0610:B0618ECK0610:JW0609:B0617ECK0609:JW0608:B0616ECK0608:JW5087:B0615ECK0607:JW0606:B0614ECK0606:JW0605:B0613
ECOL199310 C0709C0706C0704C0702C0701
ECAR218491 ECA2574ECA2573ECA2572ECA2571ECA2570ECA2569
CTET212717 CTC_02557CTC_02467CTC_02466CTC_02556CTC_02555
CPER289380 CPR_1162CPR_1163CPR_1164CPR_1165CPR_1166CPR_1161
CPER195102 CPE1146CPE1147CPE1148CPE1149CPE1150CPE1145
AMET293826 AMET_2958AMET_3411AMET_3224AMET_3223AMET_3222AMET_3408


Organism features enriched in list (features available for 64 out of the 66 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00775361792
Arrangment:Pairs 0.000014326112
Disease:Dysentery 0.001607046
Disease:Gastroenteritis 0.0074748513
Disease:Urinary_tract_infection 0.000133444
Disease:Wide_range_of_infections 6.144e-8911
Disease:chronic_bronchitis 0.001268133
Disease:otitis_media 0.004538834
Disease:sinusitis 0.004538834
GC_Content_Range4:40-60 0.000021740224
GC_Content_Range4:60-100 7.968e-81145
GC_Content_Range7:50-60 5.425e-1032107
GC_Content_Range7:60-70 3.964e-71134
Genome_Size_Range5:2-4 0.00011839197
Genome_Size_Range5:4-6 7.545e-738184
Genome_Size_Range9:2-3 0.00245645120
Genome_Size_Range9:4-5 0.00089472096
Genome_Size_Range9:5-6 0.00207821888
Habitat:Aquatic 0.0001299191
Habitat:Host-associated 0.000387035206
Optimal_temp.:30-35 0.003359947
Optimal_temp.:37 0.001284321106
Oxygen_Req:Facultative 7.180e-2257201
Pathogenic_in:Human 9.656e-1046213
Pathogenic_in:No 4.019e-69226
Salinity:Non-halophilic 0.001284321106
Shape:Rod 0.000491350347
Temp._range:Mesophilic 0.000011063473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 515
Effective number of orgs (counting one per cluster within 468 clusters): 405

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM41
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317581
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329531
YPES386656 ncbi Yersinia pestis Pestoides F1
YPES377628 ncbi Yersinia pestis Nepal5160
YPES360102 ncbi Yersinia pestis Antiqua1
YPES349746 ncbi Yersinia pestis Angola1
YPES214092 ncbi Yersinia pestis CO921
YPES187410 ncbi Yersinia pestis KIM 101
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae1
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-101
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80041
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339131
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3061
XAUT78245 ncbi Xanthobacter autotrophicus Py21
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VVUL216895 ncbi Vibrio vulnificus CMCP60
VVUL196600 ncbi Vibrio vulnificus YJ0160
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106330
VFIS312309 ncbi Vibrio fischeri ES1140
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX1
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STRO369723 ncbi Salinispora tropica CNB-4401
STOK273063 ncbi Sulfolobus tokodaii 71
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148630
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP94122 ncbi Shewanella sp. ANA-30
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP644076 Silicibacter sp. TrichCH4B1
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP292414 ncbi Ruegeria sp. TM10401
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P21
SSED425104 ncbi Shewanella sediminis HAW-EB30
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SPEA398579 ncbi Shewanella pealeana ATCC 7003450
SONE211586 ncbi Shewanella oneidensis MR-10
SMEL266834 ncbi Sinorhizobium meliloti 10211
SMED366394 ncbi Sinorhizobium medicae WSM4191
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-40
SLAC55218 Ruegeria lacuscaerulensis1
SHAL458817 ncbi Shewanella halifaxensis HAW-EB40
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SGLO343509 ncbi Sodalis glossinidius morsitans0
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB1
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23381
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDYS300267 ncbi Shigella dysenteriae Sd1970
SDEN318161 ncbi Shewanella denitrificans OS2170
SDEG203122 ncbi Saccharophagus degradans 2-400
SCO ncbi Streptomyces coelicolor A3(2)1
SBAL402882 ncbi Shewanella baltica OS1850
SBAL399599 ncbi Shewanella baltica OS1950
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SARE391037 ncbi Salinispora arenicola CNS-2051
SALA317655 ncbi Sphingopyxis alaskensis RB22561
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99411
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170251
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170291
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.11
RSP357808 ncbi Roseiflexus sp. RS-11
RSP101510 ncbi Rhodococcus jostii RHA11
RSOL267608 ncbi Ralstonia solanacearum GMI10000
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-31
RPAL316057 ncbi Rhodopseudomonas palustris BisB51
RPAL258594 ncbi Rhodopseudomonas palustris CGA0091
RMET266264 ncbi Ralstonia metallidurans CH341
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38411
RFEL315456 ncbi Rickettsia felis URRWXCal20
RETL347834 ncbi Rhizobium etli CFN 421
RDEN375451 ncbi Roseobacter denitrificans OCh 1141
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI1
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30001
PSP56811 Psychrobacter sp.1
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-11
PSP296591 ncbi Polaromonas sp. JS6661
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPUT76869 ncbi Pseudomonas putida GB-11
PPUT351746 ncbi Pseudomonas putida F10
PPUT160488 ncbi Pseudomonas putida KT24400
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ950
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO10
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PING357804 ncbi Psychromonas ingrahamii 371
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PFLU205922 ncbi Pseudomonas fluorescens Pf0-11
PENT384676 ncbi Pseudomonas entomophila L480
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K51
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PATL342610 ncbi Pseudoalteromonas atlantica T6c1
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-41
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8310
OANT439375 ncbi Ochrobactrum anthropi ATCC 491881
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2551
NSP387092 ncbi Nitratiruptor sp. SB155-21
NSP35761 Nocardioides sp.1
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251961
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X141
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101521
NEUT335283 ncbi Nitrosomonas eutropha C911
NEUR228410 ncbi Nitrosomonas europaea ATCC 197181
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124441
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390731
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP400668 ncbi Marinomonas sp. MWYL10
MSP266779 ncbi Chelativorans sp. BNC11
MSP189918 ncbi Mycobacterium sp. KMS1
MSP164757 ncbi Mycobacterium sp. JLS1
MSP164756 ncbi Mycobacterium sp. MCS1
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR394221 ncbi Maricaulis maris MCS101
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-11
MLOT266835 ncbi Mesorhizobium loti MAFF3030991
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath1
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby1
LPNE297246 ncbi Legionella pneumophila Paris1
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 11
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
JSP375286 ncbi Janthinobacterium sp. Marseille1
JSP290400 ncbi Jannaschia sp. CCS11
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-11
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium1
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HCHE349521 ncbi Hahella chejuensis KCTC 23961
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237791
HARS204773 ncbi Herminiimonas arsenicoxydans1
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GURA351605 ncbi Geobacter uraniireducens Rf40
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-20
GSUL243231 ncbi Geobacter sulfurreducens PCA1
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GKAU235909 ncbi Geobacillus kaustophilus HTA4260
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH11
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI31
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25941
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRED349161 ncbi Desulfotomaculum reducens MI-10
DRAD243230 ncbi Deinococcus radiodurans R11
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB1
CVIO243365 ncbi Chromobacterium violaceum ATCC 124720
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.1
CSP501479 Citreicella sp. SE451
CSAL290398 ncbi Chromohalobacter salexigens DSM 30431
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5551
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4111
CJAP155077 Cellvibrio japonicus0
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6300
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1111
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80520
CAULO ncbi Caulobacter crescentus CB151
CACE272562 ncbi Clostridium acetobutylicum ATCC 8240
CABO218497 ncbi Chlamydophila abortus S26/30
BWEI315730 ncbi Bacillus weihenstephanensis KBAB40
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHU412694 ncbi Bacillus thuringiensis Al Hakam0
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-270
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUI470137 ncbi Brucella suis ATCC 234451
BSUI204722 ncbi Brucella suis 13301
BSUB ncbi Bacillus subtilis subtilis 1680
BSP376 Bradyrhizobium sp.1
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BPET94624 Bordetella petrii1
BPER257313 ncbi Bordetella pertussis Tohama I1
BPAR257311 ncbi Bordetella parapertussis 128221
BOVI236 Brucella ovis1
BMEL359391 ncbi Brucella melitensis biovar Abortus 23081
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M1
BLON206672 ncbi Bifidobacterium longum NCC27050
BLIC279010 ncbi Bacillus licheniformis ATCC 145800
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BHAL272558 ncbi Bacillus halodurans C-1250
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCLA66692 ncbi Bacillus clausii KSM-K160
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1020
BCER405917 Bacillus cereus W0
BCER315749 ncbi Bacillus cytotoxicus NVH 391-980
BCER288681 ncbi Bacillus cereus E33L0
BCER226900 ncbi Bacillus cereus ATCC 145790
BCAN483179 ncbi Brucella canis ATCC 233651
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB501
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02480
BANT568206 ncbi Bacillus anthracis CDC 6840
BANT261594 ncbi Bacillus anthracis Ames Ancestor0
BANT260799 ncbi Bacillus anthracis Sterne0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB420
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9411
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62977 ncbi Acinetobacter sp. ADP11
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS421
ASP1667 Arthrobacter sp.1
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4490
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K11
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG10
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AHYD196024 Aeromonas hydrophila dhakensis0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C1
ACRY349163 ncbi Acidiphilium cryptum JF-51
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ACAU438753 ncbi Azorhizobium caulinodans ORS 5711
ABUT367737 ncbi Arcobacter butzleri RM40181
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N1
AAVE397945 ncbi Acidovorax citrulli AAC00-10
AAUR290340 ncbi Arthrobacter aurescens TC11
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G6344   G6343   G6342   G6341   G6340   G6339   
ZMOB264203 ZMO0487
YPSE349747 YPSIP31758_2156
YPSE273123 YPTB1926
YPES386656 YPDSF_1196
YPES377628
YPES360102 YPA_1306
YPES349746 YPANGOLA_A2118
YPES214092 YPO1928
YPES187410 Y2383
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884 XCC-B100_0594
XCAM316273 XCAORF_3939
XCAM314565 XC_0577
XCAM190485 XCC3614
XAXO190486 XAC0565
XAUT78245 XAUT_1974
WSUC273121
WPIP955
WPIP80849
VVUL216895
VVUL196600
VPAR223926
VFIS312309
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTUR377629
TTHE300852
TTHE262724
TTEN273068
TSP28240
TSP1755
TROS309801 TRD_0455
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TFUS269800 TFU_0341
TERY203124
TELO197221
TDEN326298 TMDEN_1111
TDEN292415
TCRU317025
TACI273075
SWOL335541
STRO369723 STROP_0723
STOK273063 ST1786
STHE322159
STHE299768
STHE292459
STHE264199
SSUI391296
SSUI391295
SSP94122
SSP84588
SSP64471
SSP644076 SCH4B_0439
SSP387093 SUN_0980
SSP321332
SSP321327
SSP292414 TM1040_3520
SSP1148
SSP1131
SSOL273057 SSO1254
SSED425104
SSAP342451
SRUB309807
SPYO370553 MGAS2096_SPY0969
SPYO370551 MGAS9429_SPY1012
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SPEA398579
SONE211586
SMEL266834 SMC03793
SMED366394 SMED_3026
SMAR399550
SLOI323850
SLAC55218 SL1157_0631
SHAL458817
SHAE279808
SGOR29390
SGLO343509
SFUM335543 SFUM_2561
SERY405948 SACE_1042
SEPI176280
SEPI176279
SELO269084
SDYS300267
SDEN318161
SDEG203122
SCO SCO6471
SBAL402882
SBAL399599
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SARE391037 SARE_0669
SALA317655 SALA_1535
SAGA211110
SAGA208435
SAGA205921
SACI56780
SACI330779 SACI_0312
RXYL266117 RXYL_2830
RTYP257363
RSPH349102 RSPH17025_0082
RSPH349101 RSPH17029_2630
RSPH272943 RSP_0970
RSP357808 ROSERS_4173
RSP101510 RHA1_RO05986
RSOL267608
RSAL288705 RSAL33209_0556
RRIC452659
RRIC392021
RPRO272947
RPOM246200 SPO_0352
RPAL316057 RPD_0496
RPAL258594 RPA0233
RMET266264 RMET_3835
RMAS416276
RLEG216596 RL4702
RFEL315456
RETL347834 RHE_CH04088
RDEN375451 RD1_1620
RCON272944
RCAS383372 RCAS_0912
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438 PTH_1335
PSYR223283 PSPTO_5086
PSP56811 PSYCPRWF_0511
PSP312153 PNUC_0539
PSP296591 BPRO_0580
PSP117
PRUM264731
PPUT76869 PPUTGB1_2439
PPUT351746
PPUT160488
PPEN278197
PMUL272843
PMOB403833
PMEN399739
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PLUM243265
PISL384616
PINT246198
PING357804 PING_3658
PHOR70601
PHAL326442
PGIN242619
PFUR186497
PFLU205922 PFL_5301
PENT384676
PDIS435591
PCRY335284 PCRYO_0865
PCAR338963
PATL342610 PATL_2717
PAST100379
PARS340102
PARC259536 PSYC_1141
PAER178306
PACN267747 PPA1919
PABY272844
OTSU357244
OIHE221109
OANT439375 OANT_3299
NWIN323098 NWI_2289
NSP387092 NIS_0713
NSP35761 NOCA_4394
NSP103690
NSEN222891
NPHA348780 NP4244A
NOCE323261
NMUL323848 NMUL_A1078
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097 NHAM_2705
NGON242231
NFAR247156 NFA47160
NEUT335283 NEUT_0607
NEUR228410 NE1809
NARO279238 SARO_0233
MXAN246197
MVAN350058 MVAN_4487
MTUB419947 MRA_2524
MTUB336982 TBFG_12520
MTHE349307
MTHE264732 MOTH_0400
MTHE187420
MTBRV RV2498C
MTBCDC MT2573
MSYN262723
MSUC221988
MSTA339860
MSP400668
MSP266779 MESO_3268
MSP189918 MKMS_4060
MSP164757 MJLS_4000
MSP164756 MMCS_3986
MSED399549 MSED_0381
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR394221 MMAR10_2882
MMAR368407
MMAR267377
MMAG342108 AMB3948
MLOT266835 MLR0906
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054 MFLV_2209
MGEN243273
MFLO265311
MFLA265072
MCAP340047
MCAP243233 MCA_1739
MBUR259564
MBOV410289 BCG_2518C
MBOV233413 MB2526C
MBAR269797
MAVI243243 MAV_2730
MART243272
MAQU351348
MAER449447
MAEO419665
MACE188937
MABS561007 MAB_1369
LXYL281090
LWEL386043
LSPH444177
LREU557436
LPNE400673 LPC_2046
LPNE297246 LPP2497
LPNE297245
LPNE272624 LPG2430
LMON265669
LMON169963
LMES203120
LLAC272622
LJOH257314
LINT363253
LINT267671
LINT189518
LINN272626
LGAS324831
LDEL390333
LDEL321956
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
KRAD266940
JSP375286 MMA_0109
JSP290400 JANN_0816
ILOI283942
IHOS453591
HWAL362976
HSP64091 VNG0627G
HSOM228400
HSOM205914
HSAL478009 OE1942F
HPYL85963
HPYL357544
HPY
HNEP81032 HNE_3534
HMUK485914 HMUK_3115
HMOD498761
HMAR272569 RRNB0257
HHEP235279
HHAL349124
HCHE349521 HCH_03524
HBUT415426
HAUR316274 HAUR_3189
HARS204773 HEAR1474
HACI382638
GVIO251221
GURA351605
GTHE420246
GSUL243231 GSU_0806
GOXY290633
GMET269799
GKAU235909
GFOR411154
GBET391165 GBCGDNIH1_0055
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855 FRANEAN1_4534
FSP106370 FRANCCI3_2804
FRANT
FPHI484022
FNOD381764
FMAG334413
FJOH376686
ERUM302409
ERUM254945
ELIT314225 ELI_03140
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DRED349161
DRAD243230 DR_1240
DPSY177439
DOLE96561
DNOD246195
DGEO319795 DGEO_1253
DETH243164
DDES207559
DARO159087 DARO_4015
CVIO243365
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSP78 CAUL_5000
CSP501479 CSE45_4080
CSAL290398 CSAL_3200
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPER195103
CPEL335992
CNOV386415 NT01CX_1153
CMUR243161
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CKLU431943 CKL_0305
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537 JK1547
CJAP155077
CHYD246194
CHUT269798
CHOM360107
CGLU196627 CG0985
CFET360106
CFEL264202
CEFF196164 CE0938
CDIP257309
CDIF272563
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922 COXBU7E912_1708
CBUR360115
CBUR227377
CBOT536232
CBOT515621
CBOT508765
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBLO291272
CBLO203907
CBEI290402
CAULO CC3659
CACE272562
CABO218497
BWEI315730
BTUR314724
BTRI382640
BTHU412694
BTHU281309
BTHE226186
BSUI470137 BSUIS_B0171
BSUI204722 BR_A0168
BSUB
BSP376 BRADO0361
BSP107806
BQUI283165
BPUM315750
BPET94624 BPET4450
BPER257313 BP1348
BPAR257311 BPP1572
BOVI236 GBOORFA0909
BMEL359391 BAB2_0355
BMEL224914 BMEII0413
BLON206672
BLIC279010
BHER314723
BHEN283166
BHAL272558
BGAR290434
BFRA295405
BFRA272559
BCLA66692
BCIC186490
BCER572264
BCER405917
BCER315749
BCER288681
BCER226900
BCAN483179 BCAN_B0168
BBUR224326
BBRO257310 BB2826
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BANT592021
BANT568206
BANT261594
BANT260799
BAMY326423
BAFZ390236
BABO262698 BRUAB2_0351
AYEL322098
AVAR240292
AURANTIMONAS
ASP76114
ASP62977 ACIAD1754
ASP62928
ASP232721 AJS_0114
ASP1667 ARTH_1391
ASAL382245
APLE434271
APLE416269
APHA212042
APER272557 APE0311
AORE350688
ANAE240017
AMAR329726
AMAR234826
ALAI441768
AHYD196024
AFUL224325
AFER243159
AEHR187272
ADEH290397 ADEH_0181
ACRY349163 ACRY_1689
ACEL351607
ACAU438753 AZC_3736
ABUT367737 ABU_1925
ABOR393595
ABAU360910 BAV0715
AAVE397945
AAUR290340 AAUR_1534
AAEO224324


Organism features enriched in list (features available for 479 out of the 515 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.003021882112
Disease:Dysentery 0.000828916
Disease:Opportunistic_infections 0.003992315
Disease:Wide_range_of_infections 5.220e-6211
GC_Content_Range4:0-40 0.0005374189213
GC_Content_Range4:60-100 0.0078300110145
GC_Content_Range7:30-40 0.0063311146166
GC_Content_Range7:40-50 0.0003607108117
GC_Content_Range7:50-60 5.245e-671107
GC_Content_Range7:60-70 0.0072226101134
Genome_Size_Range5:0-2 0.0013434139155
Genome_Size_Range5:2-4 2.426e-9186197
Genome_Size_Range5:4-6 3.225e-7129184
Genome_Size_Range5:6-10 1.202e-62547
Genome_Size_Range9:0-1 0.00433772727
Genome_Size_Range9:2-3 4.353e-6114120
Genome_Size_Range9:3-4 0.00160627277
Genome_Size_Range9:4-5 0.00239216996
Genome_Size_Range9:5-6 0.00023606088
Genome_Size_Range9:6-8 0.00001062038
Gram_Stain:Gram_Neg 0.0004858259333
Habitat:Aquatic 0.00003878791
Habitat:Multiple 0.0031458135178
Habitat:Specialized 0.00565295053
Motility:Yes 0.0013123206267
Optimal_temp.:25-30 0.0004104919
Oxygen_Req:Aerobic 0.0001448167185
Oxygen_Req:Anaerobic 0.000368995102
Oxygen_Req:Facultative 1.626e-13132201
Pathogenic_in:Human 5.171e-6155213
Pathogenic_in:No 0.0000958202226
Salinity:Non-halophilic 0.009295679106
Shape:Rod 0.0000218267347
Temp._range:Hyperthermophilic 0.00989042323
Temp._range:Mesophilic 1.425e-8371473
Temp._range:Thermophilic 0.00081793535



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 13
Effective number of orgs (counting one per cluster within 468 clusters): 6

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
TDEN243275 ncbi Treponema denticola ATCC 35405 0.00163585946
LHEL405566 ncbi Lactobacillus helveticus DPC 4571 0.00179096036
LACI272621 ncbi Lactobacillus acidophilus NCFM 0.00382656846
SPYO193567 ncbi Streptococcus pyogenes SSI-1 0.00403316906
SPYO198466 ncbi Streptococcus pyogenes MGAS315 0.00447447026
SPYO160490 ncbi Streptococcus pyogenes M1 GAS 0.00483117116
SPYO186103 ncbi Streptococcus pyogenes MGAS8232 0.00483117116
SPYO293653 ncbi Streptococcus pyogenes MGAS5005 0.00499707156
SPYO286636 ncbi Streptococcus pyogenes MGAS10394 0.00512467186
SPYO370554 ncbi Streptococcus pyogenes MGAS10750 0.00547827266
SPYO319701 ncbi Streptococcus pyogenes MGAS6180 0.00552387276
SPYO370552 ncbi Streptococcus pyogenes MGAS10270 0.00580407336
SMUT210007 ncbi Streptococcus mutans UA159 0.00939107946


Names of the homologs of the genes in the group in each of these orgs
  G6344   G6343   G6342   G6341   G6340   G6339   
TDEN243275 TDE_1522TDE_1633TDE_1632TDE_1631TDE_1523TDE_1523
LHEL405566 LHV_0987LHV_0988LHV_0989LHV_0990LHV_1314LHV_1673
LACI272621 LBA0914LBA0915LBA0916LBA0917LBA1232LBA1240
SPYO193567 SPS1037SPS1032SPS1033SPS1034SPS1035SPS1026
SPYO198466 SPYM3_0837SPYM3_0832SPYM3_0833SPYM3_0834SPYM3_0835SPYM3_0826
SPYO160490 SPY1192SPY1186SPY1188SPY1189SPY1190SPY1178
SPYO186103 SPYM18_1143SPYM18_1137SPYM18_1139SPYM18_1140SPYM18_1141SPYM18_1130
SPYO293653 M5005_SPY0910M5005_SPY0905M5005_SPY0906M5005_SPY0907M5005_SPY0908M5005_SPY0898
SPYO286636 M6_SPY0899M6_SPY0894M6_SPY0895M6_SPY0896M6_SPY0897M6_SPY0887
SPYO370554 MGAS10750_SPY1060MGAS10750_SPY1055MGAS10750_SPY1056MGAS10750_SPY1057MGAS10750_SPY1058MGAS10750_SPY1047
SPYO319701 M28_SPY0883M28_SPY0878M28_SPY0879M28_SPY0880M28_SPY0881M28_SPY0871
SPYO370552 MGAS10270_SPY1024MGAS10270_SPY1019MGAS10270_SPY1020MGAS10270_SPY1021MGAS10270_SPY1022MGAS10270_SPY1012
SMUT210007 SMU_1010SMU_1019SMU_1020SMU_1021SMU_1022SMU_1011


Organism features enriched in list (features available for 13 out of the 13 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.121e-61092
Disease:Wide_range_of_infections 1.924e-15911
Endospores:No 0.000388011211
GC_Content_Range4:0-40 1.628e-613213
GC_Content_Range7:30-40 5.713e-813166
Genome_Size_Range5:0-2 0.000015711155
Genome_Size_Range9:1-2 1.992e-611128
Gram_Stain:Gram_Pos 5.918e-712150
Habitat:Host-associated 0.000304111206
Motility:No 0.000132510151
Motility:Yes 0.00354571267
Optimal_temp.:30-35 5.011e-647
Optimal_temp.:35 0.000284137
Oxygen_Req:Facultative 0.000019712201
Pathogenic_in:Human 0.000426911213
Salinity:Non-halophilic 4.539e-610106
Shape:Coccus 3.533e-71082
Shape:Rod 0.00119022347



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-6038 (citrate degradation)101600.6977
P2-PWY (2'-(5'-phosphoribosyl)-3'-dephospho-CoA biosynthesis I (citrate lyase))89540.6643
HEXITOLDEGSUPER-PWY (superpathway of hexitol degradation)37280.5314
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50320.5126
PWY0-1315 (L-lactaldehyde degradation (anaerobic))45300.5084
SORBDEG-PWY (sorbitol degradation II)53320.4933
PWY0-301 (L-ascorbate degradation, anaerobic)84410.4902
P441-PWY (superpathway of N-acetylneuraminate degradation)63350.4900
GLCMANNANAUT-PWY (superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation)134520.4799
LYXMET-PWY (L-lyxose degradation)87410.4782
PWY0-1324 (N-acetylneuraminate and N-acetylmannosamine degradation)135520.4772
PWY0-1355 (formate to trimethylamine N-oxide electron transfer)31230.4729
FUC-RHAMCAT-PWY (superpathway of fucose and rhamnose degradation)19170.4546
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))121460.4375
PWY-5480 (pyruvate fermentation to ethanol I)109430.4318
PWY0-41 (allantoin degradation IV (anaerobic))29200.4191
GALACTITOLCAT-PWY (galactitol degradation)73330.4097



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6343   G6342   G6341   G6340   G6339   
G63440.9991770.9991420.9990790.999010.99892
G63430.999290.9992150.9988720.998926
G63420.9993660.999080.998849
G63410.9991860.99906
G63400.999145
G6339



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PAIRWISE BLAST SCORES:

  G6344   G6343   G6342   G6341   G6340   G6339   
G63440.0f0-----
G6343-0.0f0----
G6342--0.0f0---
G6341---0.0f0--
G6340----0.0f0-
G6339-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- P2-PWY (2'-(5'-phosphoribosyl)-3'-dephospho-CoA biosynthesis I (citrate lyase)) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.833, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9992 0.9989 G6340 (citX) G6340-MONOMER (apo-citrate lyase phosphoribosyl-dephospho-CoA transferase)
   *in cand* 0.9991 0.9988 G6339 (citG) G6339-MONOMER (triphosphoribosyl-dephospho-CoA synthase)
   *in cand* 0.9993 0.9988 G6342 (citE) CITRYLY-MONOMER (citrate lyase, citryl-ACP lyase β subunit)
   *in cand* 0.9993 0.9991 G6341 (citF) CITTRANS-MONOMER (citrate lyase, citrate-ACP transferase α subunit)
   *in cand* 0.9992 0.9989 G6343 (citD) ACPSUB-MONOMER (citrate lyase, acyl carrier γ subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9992 0.9989 G6344 (citC) CITC-MONOMER (citrate lyase synthetase)

- CITLY-CPLX (citrate lyase, inactive) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.500, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9993 0.9988 G6342 (citE) CITRYLY-MONOMER (citrate lyase, citryl-ACP lyase β subunit)
   *in cand* 0.9993 0.9991 G6341 (citF) CITTRANS-MONOMER (citrate lyase, citrate-ACP transferase α subunit)
   *in cand* 0.9992 0.9989 G6343 (citD) ACPSUB-MONOMER (citrate lyase, acyl carrier γ subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9988 G6339 (citG) G6339-MONOMER (triphosphoribosyl-dephospho-CoA synthase)
   *in cand* 0.9992 0.9989 G6340 (citX) G6340-MONOMER (apo-citrate lyase phosphoribosyl-dephospho-CoA transferase)
   *in cand* 0.9992 0.9989 G6344 (citC) CITC-MONOMER (citrate lyase synthetase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G6339 G6340 G6341 G6342 G6343 G6344 (centered at G6342)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6344   G6343   G6342   G6341   G6340   G6339   
68/62366/623231/62375/62369/623119/623
AAUR290340:2:Tyes--0---
ABAC204669:0:Tyes--10--
ABAU360910:0:Tyes--0---
ABUT367737:0:Tyes--0---
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