CANDIDATE ID: 373

CANDIDATE ID: 373

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9901927e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7859 (ulaE) (b4197)
   Products of gene:
     - G7859-MONOMER (L-xylulose 5-phosphate 3-epimerase)
       Reactions:
        L-xylulose-5-phosphate  ->  L-ribulose-5-phosphate
         In pathways
         PWY-5257 (PWY-5257)
         PWY0-301 (L-ascorbate degradation, anaerobic)
         LYXMET-PWY (L-lyxose degradation)

- G7858 (ulaD) (b4196)
   Products of gene:
     - G7858-MONOMER (3-keto-L-gulonate 6-phosphate decarboxylase)
     - CPLX0-7744 (3-keto-L-gulonate 6-phosphate decarboxylase)
       Reactions:
        3-keto-L-gulonate 6-phosphate + H+  ->  L-xylulose-5-phosphate + CO2
         In pathways
         PWY0-301 (L-ascorbate degradation, anaerobic)

- G7856 (ulaA) (b4193)
   Products of gene:
     - SGAT-MONOMER (UlaA)
     - EIISGA (L-ascorbate transporting phosphotransferase system)
       Reactions:
        phosphoenolpyruvate + L-ascorbate-6-phosphate[periplasmic space]  ->  L-ascorbate-6-phosphate[cytosol] + pyruvate

- G7855 (ulaG) (b4192)
   Products of gene:
     - G7855-MONOMER (L-ascorbate 6-phosphate lactonase)
     - CPLX0-7848 (L-ascorbate 6-phosphate lactonase)
       Reactions:
        L-ascorbate-6-phosphate + H2O  ->  3-keto-L-gulonate 6-phosphate
         In pathways
         PWY0-301 (L-ascorbate degradation, anaerobic)

- EG12495 (ulaC) (b4195)
   Products of gene:
     - YJFU-MONOMER (UlaC)
     - EIISGA (L-ascorbate transporting phosphotransferase system)
       Reactions:
        phosphoenolpyruvate + L-ascorbate-6-phosphate[periplasmic space]  ->  L-ascorbate-6-phosphate[cytosol] + pyruvate

- EG12494 (ulaB) (b4194)
   Products of gene:
     - YJFT-MONOMER (UlaB)
     - EIISGA (L-ascorbate transporting phosphotransferase system)
       Reactions:
        phosphoenolpyruvate + L-ascorbate-6-phosphate[periplasmic space]  ->  L-ascorbate-6-phosphate[cytosol] + pyruvate



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 81
Effective number of orgs (counting one per cluster within 468 clusters): 37

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
SSUI391296 ncbi Streptococcus suis 98HAH336
SSUI391295 ncbi Streptococcus suis 05ZYH336
SSON300269 ncbi Shigella sonnei Ss0465
SPYO370554 ncbi Streptococcus pyogenes MGAS107506
SPYO370553 ncbi Streptococcus pyogenes MGAS20966
SPYO370552 ncbi Streptococcus pyogenes MGAS102706
SPYO370551 ncbi Streptococcus pyogenes MGAS94296
SPYO319701 ncbi Streptococcus pyogenes MGAS61806
SPYO293653 ncbi Streptococcus pyogenes MGAS50056
SPYO286636 ncbi Streptococcus pyogenes MGAS103946
SPYO198466 ncbi Streptococcus pyogenes MGAS3156
SPYO193567 ncbi Streptococcus pyogenes SSI-16
SPYO186103 ncbi Streptococcus pyogenes MGAS82326
SPYO160490 ncbi Streptococcus pyogenes M1 GAS6
SPNE488221 ncbi Streptococcus pneumoniae 705856
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-66
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-146
SPNE171101 ncbi Streptococcus pneumoniae R66
SPNE170187 ncbi Streptococcus pneumoniae G546
SPNE1313 Streptococcus pneumoniae6
SMUT210007 ncbi Streptococcus mutans UA1596
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1975
SBOY300268 ncbi Shigella boydii Sb2276
SAGA211110 ncbi Streptococcus agalactiae NEM3166
SAGA208435 ncbi Streptococcus agalactiae 2603V/R6
SAGA205921 ncbi Streptococcus agalactiae A9096
PPRO298386 ncbi Photobacterium profundum SS96
PMUL272843 ncbi Pasteurella multocida multocida Pm706
OIHE221109 ncbi Oceanobacillus iheyensis HTE8315
MSYN262723 ncbi Mycoplasma synoviae 535
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E6
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP5
MPNE272634 ncbi Mycoplasma pneumoniae M1295
MPEN272633 ncbi Mycoplasma penetrans HF-25
MHYO295358 ncbi Mycoplasma hyopneumoniae 2325
MHYO262722 ncbi Mycoplasma hyopneumoniae 74485
MHYO262719 ncbi Mycoplasma hyopneumoniae J5
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82935
LCAS321967 ncbi Lactobacillus casei ATCC 3345
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
HDUC233412 ncbi Haemophilus ducreyi 35000HP6
EFER585054 ncbi Escherichia fergusonii ATCC 354696
EFAE226185 ncbi Enterococcus faecalis V5836
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
CPER195103 ncbi Clostridium perfringens ATCC 131245
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B5
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80525
BCLA66692 ncbi Bacillus clausii KSM-K165
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL036
APLE416269 ncbi Actinobacillus pleuropneumoniae L206


Names of the homologs of the genes in the group in each of these orgs
  G7859   G7858   G7856   G7855   EG12495   EG12494   
VVUL216895 VV2_1085VV2_1084VV2_1080VV2_1078VV2_1081VV2_1080
VVUL196600 VVA1609VVA1608VVA1604VVA1602VVA1605VVA1604
VCHO345073 VC0395_0988VC0395_0987VC0395_0983VC0395_0981VC0395_0984VC0395_0983
VCHO VCA0241VCA0242VCA0246VCA0248VCA0245VCA0246
STYP99287 STM4387STM4386STM4383STM4382STM4385STM4384
SSUI391296 SSU98_2062SSU98_2063SSU98_2066SSU98_2056SSU98_2064SSU98_2065
SSUI391295 SSU05_2059SSU05_2060SSU05_2063SSU05_2055SSU05_2061SSU05_2062
SSON300269 SSO_4379SSO_4378SSO_4374SSO_4377SSO_4376
SPYO370554 MGAS10750_SPY0158MGAS10750_SPY0157MGAS10750_SPY0154MGAS10750_SPY0162MGAS10750_SPY0156MGAS10750_SPY0155
SPYO370553 MGAS2096_SPY0160MGAS2096_SPY0159MGAS2096_SPY0156MGAS2096_SPY0164MGAS2096_SPY0158MGAS2096_SPY0157
SPYO370552 MGAS10270_SPY0154MGAS10270_SPY0153MGAS10270_SPY0150MGAS10270_SPY0158MGAS10270_SPY0152MGAS10270_SPY0151
SPYO370551 MGAS9429_SPY0154MGAS9429_SPY0153MGAS9429_SPY0150MGAS9429_SPY0158MGAS9429_SPY0152MGAS9429_SPY0151
SPYO319701 M28_SPY0150M28_SPY0149M28_SPY0146M28_SPY0154M28_SPY0148M28_SPY0147
SPYO293653 M5005_SPY0152M5005_SPY0151M5005_SPY0148M5005_SPY0156M5005_SPY0150M5005_SPY0149
SPYO286636 M6_SPY0198M6_SPY0197M6_SPY0194M6_SPY0202M6_SPY0196M6_SPY0195
SPYO198466 SPYM3_0139SPYM3_0138SPYM3_0135SPYM3_0142SPYM3_0137SPYM3_0136
SPYO193567 SPS0142SPS0141SPS0138SPS0146SPS0140SPS0139
SPYO186103 SPYM18_0177SPYM18_0176SPYM18_0173SPYM18_0180SPYM18_0175SPYM18_0174
SPYO160490 SPY0178SPY0177SPY0174SPY0182SPY0176SPY0175
SPNE488221 SP70585_2120SP70585_2121SP70585_2124SP70585_2117SP70585_2122SP70585_2123
SPNE487214 SPH_2187SPH_2188SPH_2191SPH_2184SPH_2189SPH_2190
SPNE487213 SPT_2029SPT_2030SPT_2033SPT_2026SPT_2031SPT_2032
SPNE171101 SPR1845SPR1846SPR1849SPR1842SPR1847SPR1848
SPNE170187 SPN20051SPN20050SPN20046SPN20055SPN20049SPN20047
SPNE1313 SPJ_2040SPJ_2041SPJ_2044SPJ_2037SPJ_2042SPJ_2043
SMUT210007 SMU_274SMU_273SMU_270SMU_290SMU_272SMU_271
SHIGELLA SGAUSGAHSGATYJFRPTXASGAB
SFLE373384 SFV_4353SFV_4352SFV_4349SFV_4348SFV_4351SFV_4350
SFLE198214 AAN45769.1AAN45768.1AAN45765.1AAN45764.1AAN45767.1AAN45766.1
SENT454169 SEHA_C4805SEHA_C4804SEHA_C4801SEHA_C4800SEHA_C4803SEHA_C4802
SENT321314 SCH_4261SCH_4260SCH_4257SCH_4256SCH_4259SCH_4258
SENT295319 SPA4204SPA4203SPA4200SPA4199SPA4202SPA4201
SENT220341 STY4743STY4742STY4739STY4738STY4741STY4740
SENT209261 T4438T4437T4434T4433T4436T4435
SDYS300267 SDY_4365SDY_4362SDY_4361SDY_4364SDY_4363
SBOY300268 SBO_4258SBO_4259SBO_4262SBO_4263SBO_4260SBO_4261
SAGA211110 GBS1852GBS1853GBS1856GBS1841GBS1854GBS1855
SAGA208435 SAG_1811SAG_1812SAG_1815SAG_1800SAG_1813SAG_1814
SAGA205921 SAK_1831SAK_1832SAK_1835SAK_1820SAK_1833SAK_1834
PPRO298386 PBPRB0269PBPRB0276PBPRB0273PBPRB0271PBPRB0274PBPRB0273
PMUL272843 PM1245PM1246PM0764PM0763PM0765PM0764
OIHE221109 OB3400OB2806OB3414OB3416OB3415
MSYN262723 MS53_0030MS53_0029MS53_0026MS53_0028MS53_0682
MSUC221988 MS0047MS0056MS0022MS0023MS0021MS0022
MPUL272635 MYPU_5980MYPU_5970MYPU_5940MYPU_5960MYPU_5950
MPNE272634 MPN492MPN493MPN496MPN494MPN495
MPEN272633 MYPE7170MYPE7180MYPE7220MYPE7190MYPE7200
MHYO295358 MHP440MHP441MHP388MHP386MHP387
MHYO262722 MHP7448_0437MHP7448_0438MHP7448_0376MHP7448_0374MHP7448_0375
MHYO262719 MHJ_0435MHJ_0436MHJ_0372MHJ_0370MHJ_0371
LMES203120 LEUM_1993LEUM_1994LEUM_1996LEUM_1998LEUM_1997
LCAS321967 LSEI_2733LSEI_2735LSEI_2737LSEI_2739LSEI_0324
KPNE272620 GKPORF_B3950GKPORF_B3949GKPORF_B3946GKPORF_B3945GKPORF_B3948GKPORF_B3947
HDUC233412 HD_1864HD_1857HD_1860HD_1861HD_1859HD_1860
EFER585054 EFER_4250EFER_4249EFER_4246EFER_4245EFER_4248EFER_4247
EFAE226185 EF_1130EF_1129EF_1127EF_1125EF_2966EF_1128
ECOO157 SGAUSGAHSGATYJFRPTXASGAB
ECOL83334 ECS5173ECS5172ECS5169ECS5168ECS5171ECS5170
ECOL585397 ECED1_5047ECED1_4983ECED1_4980ECED1_4979ECED1_4982ECED1_4981
ECOL585057 ECIAI39_4662ECIAI39_4661ECIAI39_4658ECIAI39_4657ECIAI39_4660ECIAI39_4659
ECOL585056 ECUMN_4730ECUMN_4729ECUMN_4726ECUMN_4725ECUMN_4728ECUMN_4727
ECOL585055 EC55989_4754EC55989_4753EC55989_4750EC55989_4749EC55989_4752EC55989_4751
ECOL585035 ECS88_4783ECS88_4782ECS88_4779ECS88_4778ECS88_4781ECS88_4780
ECOL585034 ECIAI1_4430ECIAI1_4429ECIAI1_4426ECIAI1_4425ECIAI1_4428ECIAI1_4427
ECOL481805 ECOLC_3816ECOLC_3817ECOLC_3820ECOLC_3821ECOLC_3818ECOLC_3819
ECOL469008 ECBD_3837ECBD_3838ECBD_3841ECBD_3842ECBD_3839ECBD_3840
ECOL439855 ECSMS35_4668ECSMS35_4667ECSMS35_4664ECSMS35_4663ECSMS35_4666ECSMS35_4665
ECOL413997 ECB_04064ECB_04063ECB_04060ECB_04059ECB_04062ECB_04061
ECOL409438 ECSE_4495ECSE_4494ECSE_4491ECSE_4490ECSE_4493ECSE_4492
ECOL405955 APECO1_2195APECO1_2196APECO1_2199APECO1_2200APECO1_3596
ECOL364106 UTI89_C4797UTI89_C4796UTI89_C4793UTI89_C4792UTI89_C4795UTI89_C4794
ECOL362663 ECP_4442ECP_4441ECP_4438ECP_4437ECP_4440ECP_4439
ECOL331111 ECE24377A_4758ECE24377A_4757ECE24377A_4753ECE24377A_4752ECE24377A_4755ECE24377A_4754
ECOL316407 ECK4193:JW4155:B4197ECK4192:JW4154:B4196ECK4189:JW5744:B4193ECK4188:JW5868:B4192ECK4191:JW4153:B4195ECK4190:JW4152:B4194
ECOL199310 C5287C5285C5281C5280C5284C5283
CPER195103 CPF_0649CPF_0645CPF_0643CPF_0501CPF_0646
CBOT508765 CLL_A3261CLL_A3265CLL_A3267CLL_A3532CLL_A3264
CBEI290402 CBEI_4647CBEI_2739CBEI_1947CBEI_2738CBEI_2740
BCLA66692 ABC3437ABC3351ABC0947ABC0884ABC0946
APLE434271 APJL_1735APJL_1730APJL_1732APJL_1733APJL_1731APJL_1732
APLE416269 APL_1703APL_1698APL_1700APL_1701APL_1699APL_1700


Organism features enriched in list (features available for 79 out of the 81 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 2.456e-83192
Arrangment:Pairs 0.000013630112
Disease:Dysentery 5.230e-666
Disease:Gastroenteritis 0.0034635613
Disease:Urinary_tract_infection 0.000315444
Disease:Wide_range_of_infections 1.500e-101111
Disease:endocarditis 0.008365834
Disease:pneumonia 0.0021383612
Endospores:No 0.000071544211
GC_Content_Range4:40-60 0.000156445224
GC_Content_Range7:50-60 1.361e-631107
Genome_Size_Range5:4-6 0.000416938184
Genome_Size_Range5:6-10 0.0063491147
Genome_Size_Range9:3-4 0.0081187477
Gram_Stain:Gram_Pos 0.006833729150
Habitat:Aquatic 0.0004099391
Habitat:Host-associated 1.481e-647206
Motility:No 0.007481429151
Optimal_temp.:- 0.002873324257
Optimal_temp.:20-30 0.007274847
Optimal_temp.:30-35 0.000032067
Optimal_temp.:37 6.719e-1036106
Oxygen_Req:Aerobic 2.294e-131185
Oxygen_Req:Anaerobic 0.00041514102
Oxygen_Req:Facultative 8.587e-3072201
Pathogenic_in:Human 1.034e-1055213
Pathogenic_in:No 7.682e-99226
Pathogenic_in:Swine 0.000040955
Salinity:Non-halophilic 3.838e-630106
Shape:Coccus 0.00002712482
Shape:Sphere 0.0066050719
Temp._range:Mesophilic 4.030e-677473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 459
Effective number of orgs (counting one per cluster within 468 clusters): 380

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae0
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-100
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3060
XAUT78245 ncbi Xanthobacter autotrophicus Py20
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TSP28240 Thermotoga sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 51
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TFUS269800 ncbi Thermobifida fusca YX0
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 71
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSP94122 ncbi Shewanella sp. ANA-30
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93110
SSP644076 Silicibacter sp. TrichCH4B0
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP292414 ncbi Ruegeria sp. TM10400
SSP1148 ncbi Synechocystis sp. PCC 68030
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P21
SSED425104 ncbi Shewanella sediminis HAW-EB30
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPEA398579 ncbi Shewanella pealeana ATCC 7003450
SONE211586 ncbi Shewanella oneidensis MR-10
SMEL266834 ncbi Sinorhizobium meliloti 10210
SMED366394 ncbi Sinorhizobium medicae WSM4190
SMAR399550 ncbi Staphylothermus marinus F11
SLOI323850 ncbi Shewanella loihica PV-40
SLAC55218 Ruegeria lacuscaerulensis0
SHAL458817 ncbi Shewanella halifaxensis HAW-EB40
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SGLO343509 ncbi Sodalis glossinidius morsitans1
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB0
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23381
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEN318161 ncbi Shewanella denitrificans OS2170
SDEG203122 ncbi Saccharophagus degradans 2-400
SBAL402882 ncbi Shewanella baltica OS1850
SBAL399599 ncbi Shewanella baltica OS1950
SAVE227882 ncbi Streptomyces avermitilis MA-46800
SARE391037 ncbi Salinispora arenicola CNS-2050
SALA317655 ncbi Sphingopyxis alaskensis RB22560
SACI56780 ncbi Syntrophus aciditrophicus SB0
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170250
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170290
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.10
RSP357808 ncbi Roseiflexus sp. RS-11
RSP101510 ncbi Rhodococcus jostii RHA11
RSOL267608 ncbi Ralstonia solanacearum GMI10000
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111700
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPOM246200 ncbi Ruegeria pomeroyi DSS-30
RPAL316058 ncbi Rhodopseudomonas palustris HaA20
RPAL316057 ncbi Rhodopseudomonas palustris BisB50
RPAL316056 ncbi Rhodopseudomonas palustris BisB180
RPAL316055 ncbi Rhodopseudomonas palustris BisA530
RPAL258594 ncbi Rhodopseudomonas palustris CGA0090
RMET266264 ncbi Ralstonia metallidurans CH340
RMAS416276 ncbi Rickettsia massiliae MTU50
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38410
RFER338969 ncbi Rhodoferax ferrireducens T1180
RFEL315456 ncbi Rickettsia felis URRWXCal20
REUT381666 ncbi Ralstonia eutropha H160
REUT264198 ncbi Ralstonia eutropha JMP1340
RETL347834 ncbi Rhizobium etli CFN 420
RDEN375451 ncbi Roseobacter denitrificans OCh 1140
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI1
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30000
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a0
PSTU379731 ncbi Pseudomonas stutzeri A15010
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP296591 ncbi Polaromonas sp. JS6660
PRUM264731 ncbi Prevotella ruminicola 230
PPUT76869 ncbi Pseudomonas putida GB-10
PPUT351746 ncbi Pseudomonas putida F10
PPUT160488 ncbi Pseudomonas putida KT24400
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PNAP365044 ncbi Polaromonas naphthalenivorans CJ20
PMOB403833 ncbi Petrotoga mobilis SJ950
PMEN399739 ncbi Pseudomonas mendocina ymp0
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT31
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFLU220664 ncbi Pseudomonas fluorescens Pf-50
PFLU216595 ncbi Pseudomonas fluorescens SBW250
PFLU205922 ncbi Pseudomonas fluorescens Pf0-10
PENT384676 ncbi Pseudomonas entomophila L480
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER208964 ncbi Pseudomonas aeruginosa PAO10
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA140
PAER178306 ncbi Pyrobaculum aerophilum IM21
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OCAR504832 ncbi Oligotropha carboxidovorans OM50
OANT439375 ncbi Ochrobactrum anthropi ATCC 491881
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2550
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.0
NSP103690 ncbi Nostoc sp. PCC 71200
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NFAR247156 ncbi Nocardia farcinica IFM 101520
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124440
MXAN246197 ncbi Myxococcus xanthus DK 16220
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE264732 ncbi Moorella thermoacetica ATCC 390730
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H1
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP409 Methylobacterium sp.1
MSP400668 ncbi Marinomonas sp. MWYL10
MSP266779 ncbi Chelativorans sp. BNC10
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPET420662 ncbi Methylibium petroleiphilum PM10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR394221 ncbi Maricaulis maris MCS100
MMAR368407 ncbi Methanoculleus marisnigri JR11
MMAR267377 ncbi Methanococcus maripaludis S21
MMAG342108 ncbi Magnetospirillum magneticum AMB-11
MLOT266835 ncbi Mesorhizobium loti MAFF3030991
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z1
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MFLA265072 ncbi Methylobacillus flagellatus KT1
MEXT419610 ncbi Methylobacterium extorquens PA11
MCAP243233 ncbi Methylococcus capsulatus Bath1
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT80
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-31
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCHO395495 ncbi Leptothrix cholodnii SP-60
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM1
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
JSP375286 ncbi Janthinobacterium sp. Marseille0
JSP290400 ncbi Jannaschia sp. CCS10
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I1
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HHAL349124 ncbi Halorhodospira halophila SL10
HCHE349521 ncbi Hahella chejuensis KCTC 23960
HBUT415426 ncbi Hyperthermus butylicus DSM 54561
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237791
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GVIO251221 ncbi Gloeobacter violaceus PCC 74210
GURA351605 ncbi Geobacter uraniireducens Rf40
GSUL243231 ncbi Geobacter sulfurreducens PCA0
GOXY290633 ncbi Gluconobacter oxydans 621H0
GMET269799 ncbi Geobacter metallireducens GS-150
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
FALN326424 ncbi Frankia alni ACN14a0
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DSHI398580 ncbi Dinoroseobacter shibae DFL 120
DRED349161 ncbi Desulfotomaculum reducens MI-10
DRAD243230 ncbi Deinococcus radiodurans R10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DOLE96561 ncbi Desulfococcus oleovorans Hxd30
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y510
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G200
DARO159087 ncbi Dechloromonas aromatica RCB0
CVIO243365 ncbi Chromobacterium violaceum ATCC 124720
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E881
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.1
CSP501479 Citreicella sp. SE451
CSAL290398 ncbi Chromohalobacter salexigens DSM 30431
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF81
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CJAP155077 Cellvibrio japonicus0
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB150
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BWEI315730 ncbi Bacillus weihenstephanensis KBAB40
BVIE269482 ncbi Burkholderia vietnamiensis G40
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHU412694 ncbi Bacillus thuringiensis Al Hakam0
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-270
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BTHA271848 ncbi Burkholderia thailandensis E2640
BSUI470137 ncbi Brucella suis ATCC 234450
BSUI204722 ncbi Brucella suis 13300
BSUB ncbi Bacillus subtilis subtilis 1681
BSP376 Bradyrhizobium sp.0
BSP36773 Burkholderia sp.0
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPSE320373 ncbi Burkholderia pseudomallei 6680
BPSE320372 ncbi Burkholderia pseudomallei 1710b0
BPSE272560 ncbi Burkholderia pseudomallei K962430
BPET94624 Bordetella petrii0
BPER257313 ncbi Bordetella pertussis Tohama I0
BPAR257311 ncbi Bordetella parapertussis 128220
BOVI236 Brucella ovis0
BMEL359391 ncbi Brucella melitensis biovar Abortus 23080
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M0
BMAL320389 ncbi Burkholderia mallei NCTC 102470
BMAL320388 ncbi Burkholderia mallei SAVP10
BMAL243160 ncbi Burkholderia mallei ATCC 233440
BLON206672 ncbi Bifidobacterium longum NCC27050
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1101
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BCER572264 ncbi Bacillus cereus 03BB1020
BCER226900 ncbi Bacillus cereus ATCC 145790
BCEN331272 ncbi Burkholderia cenocepacia HI24240
BCEN331271 ncbi Burkholderia cenocepacia AU 10540
BCAN483179 ncbi Brucella canis ATCC 233650
BBUR224326 ncbi Borrelia burgdorferi B310
BBRO257310 ncbi Bordetella bronchiseptica RB500
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1000
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BANT592021 ncbi Bacillus anthracis A02480
BANT568206 ncbi Bacillus anthracis CDC 6840
BANT261594 ncbi Bacillus anthracis Ames Ancestor0
BANT260799 ncbi Bacillus anthracis Sterne0
BAMY326423 ncbi Bacillus amyloliquefaciens FZB421
BAMB398577 ncbi Burkholderia ambifaria MC40-60
BAMB339670 ncbi Burkholderia ambifaria AMMD0
BAFZ390236 ncbi Borrelia afzelii PKo0
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9410
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294130
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP76114 ncbi Aromatoleum aromaticum EbN10
ASP62977 ncbi Acinetobacter sp. ADP10
ASP62928 ncbi Azoarcus sp. BH720
ASP232721 ncbi Acidovorax sp. JS420
ASP1667 Arthrobacter sp.1
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K11
AORE350688 ncbi Alkaliphilus oremlandii OhILAs0
ANAE240017 Actinomyces oris MG10
AMET293826 ncbi Alkaliphilus metalliredigens QYMF0
AMAR329726 ncbi Acaryochloris marina MBIC110170
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-10
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C0
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ACAU438753 ncbi Azorhizobium caulinodans ORS 5710
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
ABAU360910 ncbi Bordetella avium 197N0
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3451
AAVE397945 ncbi Acidovorax citrulli AAC00-10
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7859   G7858   G7856   G7855   EG12495   EG12494   
ZMOB264203
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884
XCAM316273
XCAM314565
XCAM190485
XAXO190486
XAUT78245
WSUC273121
WPIP955
WPIP80849
VEIS391735
UURE95667
UURE95664
UPAR505682
UMET351160 RCIX1492
TVOL273116
TTUR377629
TTHE300852
TTHE262724
TSP28240
TROS309801
TPET390874
TPEN368408 TPEN_0372
TPAL243276
TMAR243274
TLET416591
TKOD69014 TK0475
TFUS269800
TERY203124
TELO197221
TDEN326298
TDEN292415
TDEN243275
TCRU317025
TACI273075
SWOL335541
STRO369723
STOK273063 ST0238
STHE322159
STHE299768
STHE264199
SSP94122
SSP84588
SSP64471
SSP644076
SSP387093
SSP321332
SSP321327
SSP292414
SSP1148
SSP1131
SSOL273057 SSO0202
SSED425104
SRUB309807
SPEA398579
SONE211586
SMEL266834
SMED366394
SMAR399550 SMAR_0492
SLOI323850
SLAC55218
SHAL458817
SHAE279808 SH2420
SGLO343509 SG2041
SFUM335543
SERY405948 SACE_2995
SEPI176280 SE_0341
SEPI176279 SERP0216
SELO269084
SDEN318161
SDEG203122
SBAL402882
SBAL399599
SAVE227882
SARE391037
SALA317655
SACI56780
SACI330779 SACI_0802
RXYL266117
RTYP257363
RSPH349102
RSPH349101
RSPH272943
RSP357808 ROSERS_0944
RSP101510 RHA1_RO11329
RSOL267608
RSAL288705
RRUB269796
RRIC452659
RRIC392021
RPRO272947
RPOM246200
RPAL316058
RPAL316057
RPAL316056
RPAL316055
RPAL258594
RMET266264
RMAS416276
RLEG216596
RFER338969
RFEL315456
REUT381666
REUT264198
RETL347834
RDEN375451
RCON272944
RCAS383372 RCAS_1586
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820
PTHE370438 PTH_1415
PSYR223283
PSYR205918
PSTU379731
PSP56811
PSP312153
PSP296591
PRUM264731
PPUT76869
PPUT351746
PPUT160488
PPEN278197
PNAP365044
PMOB403833
PMEN399739
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PISL384616 PISL_1686
PINT246198
PHOR70601 PH1938
PHAL326442
PGIN242619
PFLU220664
PFLU216595
PFLU205922
PENT384676
PDIS435591
PCRY335284
PCAR338963
PATL342610
PAST100379
PARS340102 PARS_1830
PARC259536
PAER208964
PAER208963
PAER178306 PAE1679
OTSU357244
OCAR504832
OANT439375 OANT_4120
NWIN323098
NSP387092
NSP35761
NSP103690
NSEN222891
NPHA348780 NP3152A
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NFAR247156
NEUT335283
NEUR228410
NARO279238
MXAN246197
MVAN350058 MVAN_5589
MTUB419947
MTUB336982
MTHE349307 MTHE_0455
MTHE264732
MTHE187420 MTH129
MTBRV
MTBCDC
MSTA339860
MSP409 M446_2286
MSP400668
MSP266779
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549 MSED_0227
MPET420662
MMOB267748
MMAZ192952 MM1215
MMAR444158 MMARC6_1403
MMAR426368 MMARC7_0516
MMAR402880 MMARC5_0321
MMAR394221
MMAR368407 MEMAR_0744
MMAR267377 MMP1270
MMAG342108 AMB2285
MLOT266835 MLL3595
MLEP272631
MLAB410358 MLAB_1453
MKAN190192
MJAN243232 MJ_0252
MHUN323259 MHUN_0647
MGIL350054 MFLV_1219
MGEN243273
MFLO265311 MFL643
MFLA265072 MFLA_0250
MEXT419610 MEXT_2684
MCAP243233 MCA_3049
MBUR259564 MBUR_1994
MBOV410289
MBOV233413
MBAR269797 MBAR_A0935
MAVI243243
MART243272
MAQU351348
MAER449447
MAEO419665 MAEO_0614
MACE188937 MA4504
MABS561007
LSAK314315
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LLAC272623
LJOH257314
LINT363253
LINT267671
LINT189518
LHEL405566 LHV_1844
LGAS324831
LDEL390333
LDEL321956
LCHO395495
LBRE387344 LVIS_0442
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621 LBA1777
KRAD266940 KRAD_3593
JSP375286
JSP290400
ILOI283942
IHOS453591 IGNI_0269
HWAL362976 HQ2591A
HSP64091 VNG0851C
HSAL478009 OE2252R
HPYL85963
HPYL357544
HPY
HNEP81032
HMUK485914
HMOD498761
HMAR272569 RRNAC3033
HINF374930
HINF281310
HHEP235279
HHAL349124
HCHE349521
HBUT415426 HBUT_0129
HAUR316274 HAUR_1527
HARS204773
HACI382638
GVIO251221
GURA351605
GSUL243231
GOXY290633
GMET269799
GFOR411154
GBET391165
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374
FSP1855
FSP106370
FRANT
FPHI484022
FNUC190304
FNOD381764
FJOH376686 FJOH_0155
FALN326424
ERUM302409
ERUM254945
ELIT314225
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DSHI398580
DRED349161
DRAD243230
DPSY177439
DOLE96561
DNOD246195
DHAF138119
DGEO319795
DETH243164
DDES207559
DARO159087
CVIO243365
CVES412965
CTRA471473
CTRA471472
CTET212717 CTC_00277
CTEP194439
CSUL444179
CSP78 CAUL_2721
CSP501479 CSE45_1189
CSAL290398 CSAL_2648
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPEL335992
CNOV386415 NT01CX_1443
CMUR243161
CMET456442 MBOO_0772
CKOR374847 KCR_1307
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CJAP155077
CHYD246194
CHUT269798
CHOM360107
CFET360106
CFEL264202
CEFF196164
CDES477974
CCUR360105
CCON360104
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBLO291272
CBLO203907
CAULO
CACE272562 CAC0396
CABO218497
BXEN266265
BWEI315730
BVIE269482
BTUR314724
BTRI382640
BTHU412694
BTHU281309
BTHE226186
BTHA271848
BSUI470137
BSUI204722
BSUB BSU03460
BSP376
BSP36773
BSP107806
BQUI283165
BPSE320373
BPSE320372
BPSE272560
BPET94624
BPER257313
BPAR257311
BOVI236
BMEL359391
BMEL224914
BMAL320389
BMAL320388
BMAL243160
BLON206672
BJAP224911 BLR5974
BHER314723
BHEN283166
BGAR290434
BFRA295405
BFRA272559
BCIC186490
BCER572264
BCER226900
BCEN331272
BCEN331271
BCAN483179
BBUR224326
BBRO257310
BBAC360095
BBAC264462
BAPH372461
BAPH198804
BANT592021
BANT568206
BANT261594
BANT260799
BAMY326423 RBAM_003630
BAMB398577
BAMB339670
BAFZ390236
BABO262698
AYEL322098
AVAR240292
AURANTIMONAS
ASP76114
ASP62977
ASP62928
ASP232721
ASP1667 ARTH_3708
APHA212042
APER272557 APE0952
AORE350688
ANAE240017
AMET293826
AMAR329726
AMAR234826
ALAI441768
AFUL224325 AF_0861
AFER243159
AEHR187272
ADEH290397
ACRY349163
ACEL351607
ACAU438753
ABUT367737
ABOR393595
ABAU360910
ABAC204669 ACID345_2848
AAVE397945
AAEO224324


Organism features enriched in list (features available for 429 out of the 459 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 4.981e-94492
Arrangment:Clusters 0.0001227517
Arrangment:Pairs 8.699e-1351112
Disease:Gastroenteritis 0.0001589313
Disease:Pneumonia 0.0000490212
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.0001612211
Endospores:No 0.0000751136211
Endospores:Yes 0.00093352953
GC_Content_Range4:0-40 0.0004130140213
GC_Content_Range4:40-60 0.0007662149224
GC_Content_Range4:60-100 3.855e-15139145
GC_Content_Range7:0-30 0.00542762747
GC_Content_Range7:50-60 0.003627268107
GC_Content_Range7:60-70 9.001e-17131134
Genome_Size_Range5:0-2 0.0031396126155
Genome_Size_Range5:4-6 0.0001964118184
Genome_Size_Range5:6-10 0.00004674547
Genome_Size_Range9:1-2 0.0010973107128
Genome_Size_Range9:4-5 0.00006585596
Genome_Size_Range9:6-8 0.00008203738
Gram_Stain:Gram_Neg 0.0007973261333
Gram_Stain:Gram_Pos 3.876e-1474150
Habitat:Aquatic 0.00006638191
Habitat:Host-associated 0.0004274135206
Habitat:Multiple 0.0068325120178
Habitat:Specialized 0.00324284753
Motility:No 0.000011991151
Optimal_temp.:- 8.798e-7214257
Optimal_temp.:25-30 0.00264291919
Optimal_temp.:30-35 0.001643917
Optimal_temp.:30-37 5.051e-6418
Optimal_temp.:37 1.571e-854106
Oxygen_Req:Aerobic 2.158e-13170185
Oxygen_Req:Facultative 1.468e-3287201
Pathogenic_in:Human 5.778e-18112213
Pathogenic_in:No 4.283e-11199226
Salinity:Non-halophilic 1.636e-658106
Shape:Coccus 4.528e-74182
Shape:Spiral 0.00002063434
Temp._range:Mesophilic 8.196e-6331473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 26
Effective number of orgs (counting one per cluster within 468 clusters): 12

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
MPNE272634 ncbi Mycoplasma pneumoniae M129 6.679e-6945
MHYO295358 ncbi Mycoplasma hyopneumoniae 232 9.628e-61015
MHYO262719 ncbi Mycoplasma hyopneumoniae J 0.00001061035
MHYO262722 ncbi Mycoplasma hyopneumoniae 7448 0.00001121045
MSYN262723 ncbi Mycoplasma synoviae 53 0.00001231065
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP 0.00003461305
MPEN272633 ncbi Mycoplasma penetrans HF-2 0.00009281585
SPYO370553 ncbi Streptococcus pyogenes MGAS2096 0.00386036856
SPYO193567 ncbi Streptococcus pyogenes SSI-1 0.00403316906
SPYO198466 ncbi Streptococcus pyogenes MGAS315 0.00447447026
SPYO370551 ncbi Streptococcus pyogenes MGAS9429 0.00459077056
SPYO160490 ncbi Streptococcus pyogenes M1 GAS 0.00483117116
SPYO186103 ncbi Streptococcus pyogenes MGAS8232 0.00483117116
SPYO293653 ncbi Streptococcus pyogenes MGAS5005 0.00499707156
SPYO286636 ncbi Streptococcus pyogenes MGAS10394 0.00512467186
SPYO370554 ncbi Streptococcus pyogenes MGAS10750 0.00547827266
SPYO319701 ncbi Streptococcus pyogenes MGAS6180 0.00552387276
SPYO370552 ncbi Streptococcus pyogenes MGAS10270 0.00580407336
SSUI391295 ncbi Streptococcus suis 05ZYH33 0.00645197466
SPNE170187 ncbi Streptococcus pneumoniae G54 0.00762557676
SSUI391296 ncbi Streptococcus suis 98HAH33 0.00856847826
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-14 0.00863467836
SPNE1313 Streptococcus pneumoniae 0.00904067896
SPNE171101 ncbi Streptococcus pneumoniae R6 0.00932007936
SMUT210007 ncbi Streptococcus mutans UA159 0.00939107946
SPNE488221 ncbi Streptococcus pneumoniae 70585 0.00967947986


Names of the homologs of the genes in the group in each of these orgs
  G7859   G7858   G7856   G7855   EG12495   EG12494   
MPNE272634 MPN492MPN493MPN496MPN494MPN495
MHYO295358 MHP440MHP441MHP388MHP386MHP387
MHYO262719 MHJ_0435MHJ_0436MHJ_0372MHJ_0370MHJ_0371
MHYO262722 MHP7448_0437MHP7448_0438MHP7448_0376MHP7448_0374MHP7448_0375
MSYN262723 MS53_0030MS53_0029MS53_0026MS53_0028MS53_0682
MPUL272635 MYPU_5980MYPU_5970MYPU_5940MYPU_5960MYPU_5950
MPEN272633 MYPE7170MYPE7180MYPE7220MYPE7190MYPE7200
SPYO370553 MGAS2096_SPY0160MGAS2096_SPY0159MGAS2096_SPY0156MGAS2096_SPY0164MGAS2096_SPY0158MGAS2096_SPY0157
SPYO193567 SPS0142SPS0141SPS0138SPS0146SPS0140SPS0139
SPYO198466 SPYM3_0139SPYM3_0138SPYM3_0135SPYM3_0142SPYM3_0137SPYM3_0136
SPYO370551 MGAS9429_SPY0154MGAS9429_SPY0153MGAS9429_SPY0150MGAS9429_SPY0158MGAS9429_SPY0152MGAS9429_SPY0151
SPYO160490 SPY0178SPY0177SPY0174SPY0182SPY0176SPY0175
SPYO186103 SPYM18_0177SPYM18_0176SPYM18_0173SPYM18_0180SPYM18_0175SPYM18_0174
SPYO293653 M5005_SPY0152M5005_SPY0151M5005_SPY0148M5005_SPY0156M5005_SPY0150M5005_SPY0149
SPYO286636 M6_SPY0198M6_SPY0197M6_SPY0194M6_SPY0202M6_SPY0196M6_SPY0195
SPYO370554 MGAS10750_SPY0158MGAS10750_SPY0157MGAS10750_SPY0154MGAS10750_SPY0162MGAS10750_SPY0156MGAS10750_SPY0155
SPYO319701 M28_SPY0150M28_SPY0149M28_SPY0146M28_SPY0154M28_SPY0148M28_SPY0147
SPYO370552 MGAS10270_SPY0154MGAS10270_SPY0153MGAS10270_SPY0150MGAS10270_SPY0158MGAS10270_SPY0152MGAS10270_SPY0151
SSUI391295 SSU05_2059SSU05_2060SSU05_2063SSU05_2055SSU05_2061SSU05_2062
SPNE170187 SPN20051SPN20050SPN20046SPN20055SPN20049SPN20047
SSUI391296 SSU98_2062SSU98_2063SSU98_2066SSU98_2056SSU98_2064SSU98_2065
SPNE487213 SPT_2029SPT_2030SPT_2033SPT_2026SPT_2031SPT_2032
SPNE1313 SPJ_2040SPJ_2041SPJ_2044SPJ_2037SPJ_2042SPJ_2043
SPNE171101 SPR1845SPR1846SPR1849SPR1842SPR1847SPR1848
SMUT210007 SMU_274SMU_273SMU_270SMU_290SMU_272SMU_271
SPNE488221 SP70585_2120SP70585_2121SP70585_2124SP70585_2117SP70585_2122SP70585_2123


Organism features enriched in list (features available for 25 out of the 26 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 1.449e-101892
Disease:Enzootic_pneumonia 0.001768322
Disease:Meningitis 0.002098137
Disease:Wide_range_of_infections 7.398e-171111
Disease:endocarditis 0.009785824
Disease:septicemia_and_arthritis 0.001768322
Endospores:No 3.541e-1225211
GC_Content_Range4:0-40 5.188e-923213
GC_Content_Range4:40-60 0.00051902224
GC_Content_Range7:0-30 0.0086174647
GC_Content_Range7:30-40 0.000026617166
Genome_Size_Range5:0-2 1.613e-820155
Genome_Size_Range9:0-1 0.0004821627
Genome_Size_Range9:1-2 0.000125914128
Gram_Stain:Gram_Neg 0.00193687333
Gram_Stain:Gram_Pos 5.850e-617150
Habitat:Host-associated 0.000023219206
Motility:No 1.520e-1223151
Motility:Yes 0.00003552267
Optimal_temp.:30-35 2.256e-867
Optimal_temp.:35 0.002098137
Optimal_temp.:37 0.005539410106
Oxygen_Req:Facultative 9.741e-1325201
Pathogenic_in:Human 0.000040219213
Pathogenic_in:Swine 9.630e-855
Salinity:Non-halophilic 7.392e-1220106
Shape:Coccus 1.664e-111882
Shape:Sphere 3.763e-6719
Temp._range:Mesophilic 0.004744125473



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-301 (L-ascorbate degradation, anaerobic)84670.7836
LYXMET-PWY (L-lyxose degradation)87590.6566
GLCMANNANAUT-PWY (superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation)134660.5643
PWY0-1324 (N-acetylneuraminate and N-acetylmannosamine degradation)135660.5612
P441-PWY (superpathway of N-acetylneuraminate degradation)63430.5510
PWY0-1315 (L-lactaldehyde degradation (anaerobic))45340.5190
PWY-1861 (formaldehyde assimilation II (RuMP Cycle))71430.5072
RUMP-PWY (formaldehyde oxidation I)68410.4922
HEXITOLDEGSUPER-PWY (superpathway of hexitol degradation)37280.4683
SORBDEG-PWY (sorbitol degradation II)53340.4638
TREDEGLOW-PWY (trehalose degradation I (low osmolarity))121540.4617
GLYCEROLMETAB-PWY (glycerol degradation V)116510.4404
PWY0-1355 (formate to trimethylamine N-oxide electron transfer)31240.4383
PWY-5480 (pyruvate fermentation to ethanol I)109480.4249
RHAMCAT-PWY (rhamnose degradation)91430.4212
MANNIDEG-PWY (mannitol degradation I)99450.4194
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50300.4128
ARABCAT-PWY (L-arabinose degradation I)128510.4059
FUC-RHAMCAT-PWY (superpathway of fucose and rhamnose degradation)19170.4033
PWY0-1295 (pyrimidine ribonucleosides degradation I)239720.4017



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7858   G7856   G7855   EG12495   EG12494   
G78590.9992810.9988870.9987820.9988590.998861
G78580.9988760.9987180.9989530.998902
G78560.9990220.999620.999474
G78550.9987340.998906
EG124950.999414
EG12494



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PAIRWISE BLAST SCORES:

  G7859   G7858   G7856   G7855   EG12495   EG12494   
G78590.0f0-----
G7858-0.0f0----
G7856--0.0f0---
G7855---0.0f0--
EG12495----0.0f0-
EG12494-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- PWY0-301 (L-ascorbate degradation, anaerobic) (degree of match pw to cand: 0.750, degree of match cand to pw: 0.500, average score: 0.999)
  Genes in pathway or complex:
   *in cand* 0.9991 0.9988 G7859 (ulaE) G7859-MONOMER (L-xylulose 5-phosphate 3-epimerase)
   *in cand* 0.9991 0.9987 G7858 (ulaD) G7858-MONOMER (3-keto-L-gulonate 6-phosphate decarboxylase)
             0.9987 0.9984 G7860 (ulaF) G7860-MONOMER (L-ribulose 5-phosphate 4-epimerase)
   *in cand* 0.9990 0.9987 G7855 (ulaG) G7855-MONOMER (L-ascorbate 6-phosphate lactonase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9989 EG12494 (ulaB) YJFT-MONOMER (UlaB)
   *in cand* 0.9993 0.9987 EG12495 (ulaC) YJFU-MONOMER (UlaC)
   *in cand* 0.9993 0.9989 G7856 (ulaA) SGAT-MONOMER (UlaA)

- EIISGA (L-ascorbate transporting phosphotransferase system) (degree of match pw to cand: 0.600, degree of match cand to pw: 0.500, average score: 0.502)
  Genes in pathway or complex:
   *in cand* 0.9993 0.9987 EG12495 (ulaC) YJFU-MONOMER (UlaC)
   *in cand* 0.9993 0.9989 EG12494 (ulaB) YJFT-MONOMER (UlaB)
             0.1385 0.0395 EG10788 (ptsH) PTSH-MONOMER (HPr)
             0.2108 0.1111 EG10789 (ptsI) PTSI-MONOMER (PTS enzyme I)
   *in cand* 0.9993 0.9989 G7856 (ulaA) SGAT-MONOMER (UlaA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9990 0.9987 G7855 (ulaG) G7855-MONOMER (L-ascorbate 6-phosphate lactonase)
   *in cand* 0.9991 0.9987 G7858 (ulaD) G7858-MONOMER (3-keto-L-gulonate 6-phosphate decarboxylase)
   *in cand* 0.9991 0.9988 G7859 (ulaE) G7859-MONOMER (L-xylulose 5-phosphate 3-epimerase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG12494 EG12495 G7855 G7856 G7858 G7859 (centered at EG12495)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7859   G7858   G7856   G7855   EG12495   EG12494   
112/623155/623149/62385/623162/62397/623
AAUR290340:2:Tyes13620----
ABAC204669:0:Tyes0-----
AFUL224325:0:Tyes-0----
AHYD196024:0:Tyes--0-2-
APER272557:0:Tyes-0----
APLE416269:0:Tyes502312
APLE434271:0:Tno502312
ASAL382245:5:Tyes--2-0-
ASP1667:3:Tyes-0----
BAMY326423:0:Tyes-0----
BCER288681:0:Tno--0-21
BCER315749:1:Tyes--0-2-
BCER405917:1:Tyes--0--1
BCLA66692:0:Tyes2581249563-062
BHAL272558:0:Tyes--3-02
BJAP224911:0:Fyes0-----
BLIC279010:0:Tyes-22532-0-
BPUM315750:0:Tyes-5740-21
BSUB:0:Tyes-0----
CACE272562:1:Tyes-0----
CBEI290402:0:Tyes-26407740773775
CBOT36826:1:Tno0-6-8-
CBOT441770:0:Tyes0-6-8-
CBOT441771:0:Tno0-5-7-
CBOT441772:1:Tno--0-2-
CBOT498213:1:Tno--0-2-
CBOT508765:1:Tyes0-462303
CBOT515621:2:Tyes--0-2-
CBOT536232:0:Tno0-6-8-
CDIF272563:1:Tyes--1313-13150
CDIP257309:0:Tyes--1-0-
CGLU196627:0:Tyes--0-1-
CKOR374847:0:Tyes-0----
CMAQ397948:0:Tyes0373----
CMET456442:0:Tyes-0----
CMIC31964:2:Tyes-809--0-
CMIC443906:2:Tyes-143--0-
CNOV386415:0:Tyes----0-
CPER195102:1:Tyes--2-01
CPER195103:0:Tno147-1431410144
CPER289380:3:Tyes--2-01
CSAL290398:0:Tyes----0-
CSP501479:8:Fyes0-----
CSP78:2:Tyes0-----
CTET212717:0:Tyes----0-
ECAR218491:0:Tyes--0-2-
ECOL199310:0:Tno751043
ECOL316407:0:Tno541032
ECOL331111:6:Tno641032
ECOL362663:0:Tno541032
ECOL364106:1:Tno541032
ECOL405955:2:Tyes14081407140414030-
ECOL409438:6:Tyes541032
ECOL413997:0:Tno541032
ECOL439855:4:Tno541032
ECOL469008:0:Tno014523
ECOL481805:0:Tno014523
ECOL585034:0:Tno541032
ECOL585035:0:Tno541032
ECOL585055:0:Tno541032
ECOL585056:2:Tno541032
ECOL585057:0:Tno541032
ECOL585397:0:Tno5541032
ECOL83334:0:Tno541032
ECOLI:0:Tno541032
ECOO157:0:Tno541032
EFAE226185:3:Tyes542017353
EFER585054:1:Tyes541032
ESP42895:1:Tyes--0-2-
FJOH376686:0:Tyes---0--
FMAG334413:1:Tyes--0-2-
GKAU235909:1:Tyes--0-2-
GTHE420246:1:Tyes-0--345-
HAUR316274:2:Tyes----0-
HBUT415426:0:Tyes-0----
HDUC233412:0:Tyes502312
HINF71421:0:Tno20----
HMAR272569:8:Tyes---0--
HSAL478009:4:Tyes---0--
HSOM205914:1:Tyes10----
HSOM228400:0:Tno10----
HSP64091:2:Tno---0--
HWAL362976:1:Tyes---0--
IHOS453591:0:Tyes-0----
KPNE272620:2:Tyes541032
KRAD266940:2:Fyes0-----
LACI272621:0:Tyes----0-
LBRE387344:2:Tyes-0----
LCAS321967:1:Tyes23342336233823400-
LHEL405566:0:Tyes----0-
LINN272626:1:Tno--0-21
LLAC272622:5:Tyes--0-2-
LMES203120:1:Tyes01354-
LMON169963:0:Tno--707-0708
LMON265669:0:Tyes--0-21
LPLA220668:0:Tyes--0-313-
LSPH444177:1:Tyes--0-2-
LWEL386043:0:Tyes--0-21
LXYL281090:0:Tyes----01
MACE188937:0:Tyes-0----
MAEO419665:0:Tyes-0----
MBAR269797:1:Tyes-0----
MBUR259564:0:Tyes-0----
MCAP243233:0:Tyes-0----
MCAP340047:0:Tyes--0-1-
MEXT419610:0:Tyes0-----
MFLA265072:0:Tyes-0----
MFLO265311:0:Tyes--0---
MGIL350054:3:Tyes----0-
MHUN323259:0:Tyes-0----
MHYO262719:0:Tyes65662-01
MHYO262722:0:Tno62632-01
MHYO295358:0:Tno55562-01
MJAN243232:2:Tyes-0----
MLAB410358:0:Tyes-0----
MLOT266835:2:Tyes0-----
MMAG342108:0:Tyes---0--
MMAR267377:0:Tyes-0----
MMAR368407:0:Tyes-0----
MMAR402880:1:Tyes-0----
MMAR426368:0:Tyes-0----
MMAR444158:0:Tyes-0----
MMAZ192952:0:Tyes-0----
MMYC272632:0:Tyes--1-0-
MPEN272633:0:Tyes015-23
MPNE272634:0:Tyes014-23
MPUL272635:0:Tyes430-21
MSED399549:0:Tyes-0----
MSP409:2:Tyes0-----
MSUC221988:0:Tyes26351201
MSYN262723:0:Tyes430-2670
MTHE187420:0:Tyes-0----
MTHE349307:0:Tyes-0----
MVAN350058:0:Tyes----0-
NPHA348780:2:Tyes---0--
OANT439375:4:Tyes----0-
OIHE221109:0:Tyes5940608-610609
PABY272844:0:Tyes-1233-0--
PACN267747:0:Tyes4484470-1-
PAER178306:0:Tyes-0----
PARS340102:0:Tyes-0----
PFUR186497:0:Tyes-0-1580--
PHOR70601:0:Tyes-0----
PING357804:0:Tyes--0-2-
PISL384616:0:Tyes-0----
PLUM243265:0:Fyes--2-0-
PMUL272843:1:Tyes4824831021
PPRO298386:1:Tyes074254
PSP117:0:Tyes02152----
PTHE370438:0:Tyes---0--
RCAS383372:0:Tyes---0--
RSP101510:0:Fyes-0----
RSP357808:0:Tyes---0--
SACI330779:0:Tyes-0----
SAGA205921:0:Tno11121501314
SAGA208435:0:Tno11121501314
SAGA211110:0:Tyes11121501314
SAUR158878:1:Tno-2580-2-
SAUR158879:1:Tno-2360-2-
SAUR196620:0:Tno-2390-2-
SAUR273036:0:Tno-2450-2-
SAUR282458:0:Tno-2580-2-
SAUR282459:0:Tno-2460-2-
SAUR359786:0:Tno-0----
SAUR359786:1:Tno--0-2-
SAUR359787:0:Tno-0----
SAUR359787:1:Tno--0-2-
SAUR367830:3:Tno-2140-2-
SAUR418127:0:Tyes-2590-2-
SAUR426430:0:Tno-2270-2-
SAUR93061:0:Fno-2340-2-
SAUR93062:1:Tno-2120-2-
SBOY300268:1:Tyes014523
SCO:2:Fyes6474-0---
SDYS300267:1:Tyes-41032
SENT209261:0:Tno541032
SENT220341:0:Tno541032
SENT295319:0:Tno541032
SENT321314:2:Tno541032
SENT454169:2:Tno541032
SEPI176279:1:Tyes-0----
SEPI176280:0:Tno-0----
SERY405948:0:Tyes0-----
SFLE198214:0:Tyes541032
SFLE373384:0:Tno541032
SGLO343509:3:Tyes----0-
SGOR29390:0:Tyes--2-0-
SHAE279808:0:Tyes-0----
SHIGELLA:0:Tno541032
SMAR399550:0:Tyes-0----
SMUT210007:0:Tyes4301721
SPNE1313:0:Tyes347056
SPNE170187:0:Tyes458067
SPNE171101:0:Tno347056
SPNE487213:0:Tno347056
SPNE487214:0:Tno347056
SPNE488221:0:Tno347056
SPRO399741:1:Tyes170517043-0-
SPYO160490:0:Tno430821
SPYO186103:0:Tno430721
SPYO193567:0:Tno430821
SPYO198466:0:Tno430721
SPYO286636:0:Tno430821
SPYO293653:0:Tno430821
SPYO319701:0:Tyes430821
SPYO370551:0:Tno430821
SPYO370552:0:Tno430821
SPYO370553:0:Tno430821
SPYO370554:0:Tyes430821
SSAP342451:2:Tyes-938--0-
SSOL273057:0:Tyes-0----
SSON300269:1:Tyes43-021
SSUI391295:0:Tyes458067
SSUI391296:0:Tyes6710089
STHE292459:0:Tyes--0-41
STOK273063:0:Tyes-0----
STYP99287:1:Tyes541032
TKOD69014:0:Tyes-0----
TPEN368408:1:Tyes-0----
TPSE340099:0:Tyes--1-20
TSP1755:0:Tyes--1-02
TTEN273068:0:Tyes--1-02
TWHI203267:0:Tyes01----
TWHI218496:0:Tno01----
UMET351160:0:Tyes-0----
VCHO:1:Fyes015745
VCHO345073:0:Tno762032
VFIS312309:1:Tyes--69-068
VPAR223926:0:Tyes--0-21
VVUL196600:1:Tyes762032
VVUL216895:0:Tno762032
YENT393305:1:Tyes--0-2-
YPES187410:5:Tno0-767-770-
YPES214092:3:Tno721-205-0-
YPES349746:2:Tno558-2-0-
YPES360102:3:Tyes765-2-0-
YPES377628:2:Tno0-1428-1424-
YPES386656:2:Tno1054-2-0-
YPSE273123:2:Tno0-1821-1819-
YPSE349747:2:Tno1812-0-3-



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