CANDIDATE ID: 374

CANDIDATE ID: 374

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9943727e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    5.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G6478 (ssuA) (b0936)
   Products of gene:
     - G6478-MONOMER (SsuA)
     - ABC-56-CPLX (aliphatic sulfonate ABC transporter)
       Reactions:
        ATP + an aliphatic sulfonate[periplasmic space] + H2O  ->  an aliphatic sulfonate[cytosol] + ADP + phosphate

- G6477 (ssuD) (b0935)
   Products of gene:
     - MONOMER-162 (alkanesulfonate monooxygenase)
     - CPLX0-225 (alkanesulfonate monooxygenase, FMNH2-dependent)
       Reactions:
        an alkanesulfonate + FMNH2 + oxygen  ->  an aldehyde + sulfite + FMN + H2O
         In pathways
         ALKANEMONOX-PWY (two-component alkanesulfonate monooxygenase)

- G6476 (ssuC) (b0934)
   Products of gene:
     - YCBM-MONOMER (SsuC)
     - ABC-56-CPLX (aliphatic sulfonate ABC transporter)
       Reactions:
        ATP + an aliphatic sulfonate[periplasmic space] + H2O  ->  an aliphatic sulfonate[cytosol] + ADP + phosphate

- G6219 (tauC) (b0367)
   Products of gene:
     - TAUC-MONOMER (TauC)
     - ABC-64-CPLX (taurine ABC transporter)
       Reactions:
        taurine[periplasmic space] + ATP + H2O  ->  taurine[cytosol] + ADP + phosphate

- G6217 (tauA) (b0365)
   Products of gene:
     - TAUA-MONOMER (TauA)
     - ABC-64-CPLX (taurine ABC transporter)
       Reactions:
        taurine[periplasmic space] + ATP + H2O  ->  taurine[cytosol] + ADP + phosphate

- EG12358 (ssuB) (b0933)
   Products of gene:
     - YCBE-MONOMER (SsuB)
     - ABC-56-CPLX (aliphatic sulfonate ABC transporter)
       Reactions:
        ATP + an aliphatic sulfonate[periplasmic space] + H2O  ->  an aliphatic sulfonate[cytosol] + ADP + phosphate



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 153
Effective number of orgs (counting one per cluster within 468 clusters): 102

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py26
VEIS391735 ncbi Verminephrobacter eiseniae EF01-25
TFUS269800 ncbi Thermobifida fusca YX5
SSON300269 ncbi Shigella sonnei Ss0465
SPRO399741 ncbi Serratia proteamaculans 5686
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SDYS300267 ncbi Shigella dysenteriae Sd1976
SAVE227882 ncbi Streptomyces avermitilis MA-46806
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSP101510 ncbi Rhodococcus jostii RHA16
RSOL267608 ncbi Ralstonia solanacearum GMI10006
RPOM246200 ncbi Ruegeria pomeroyi DSS-35
RPAL316058 ncbi Rhodopseudomonas palustris HaA25
RPAL316055 ncbi Rhodopseudomonas palustris BisA536
RPAL258594 ncbi Rhodopseudomonas palustris CGA0096
RMET266264 ncbi Ralstonia metallidurans CH346
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38416
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1346
RETL347834 ncbi Rhizobium etli CFN 426
RDEN375451 ncbi Roseobacter denitrificans OCh 1145
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PNAP365044 ncbi Polaromonas naphthalenivorans CJ26
PMEN399739 ncbi Pseudomonas mendocina ymp6
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2556
NFAR247156 ncbi Nocardia farcinica IFM 101526
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-16
MTHE264732 ncbi Moorella thermoacetica ATCC 390735
MSP409 Methylobacterium sp.6
MSP189918 ncbi Mycobacterium sp. KMS6
MSP164757 ncbi Mycobacterium sp. JLS6
MSP164756 ncbi Mycobacterium sp. MCS6
MSME246196 ncbi Mycobacterium smegmatis MC2 1556
MPET420662 ncbi Methylibium petroleiphilum PM16
MMAG342108 ncbi Magnetospirillum magneticum AMB-15
MLOT266835 ncbi Mesorhizobium loti MAFF3030996
MKAN190192 ncbi Methanopyrus kandleri AV195
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK6
MEXT419610 ncbi Methylobacterium extorquens PA16
MAVI243243 ncbi Mycobacterium avium 1046
MAER449447 ncbi Microcystis aeruginosa NIES-8435
MABS561007 ncbi Mycobacterium abscessus ATCC 199776
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82935
KRAD266940 ncbi Kineococcus radiotolerans SRS302165
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille6
JSP290400 ncbi Jannaschia sp. CCS15
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237796
GVIO251221 ncbi Gloeobacter violaceus PCC 74215
GURA351605 ncbi Geobacter uraniireducens Rf45
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-26
GBET391165 ncbi Granulibacter bethesdensis CGDNIH16
FSP1855 Frankia sp. EAN1pec5
FSP106370 ncbi Frankia sp. CcI35
FALN326424 ncbi Frankia alni ACN14a6
ESP42895 Enterobacter sp.6
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DHAF138119 ncbi Desulfitobacterium hafniense Y515
CSP78 Caulobacter sp.5
CJAP155077 Cellvibrio japonicus6
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130325
BXEN266265 ncbi Burkholderia xenovorans LB4006
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTHU412694 ncbi Bacillus thuringiensis Al Hakam6
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-275
BTHA271848 ncbi Burkholderia thailandensis E2646
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13305
BSUB ncbi Bacillus subtilis subtilis 1685
BSP376 Bradyrhizobium sp.6
BSP36773 Burkholderia sp.6
BPSE320373 ncbi Burkholderia pseudomallei 6686
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962436
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BOVI236 Brucella ovis5
BMEL359391 ncbi Brucella melitensis biovar Abortus 23085
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M5
BMAL320389 ncbi Burkholderia mallei NCTC 102476
BMAL320388 ncbi Burkholderia mallei SAVP16
BMAL243160 ncbi Burkholderia mallei ATCC 233446
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1106
BCLA66692 ncbi Bacillus clausii KSM-K166
BCER572264 ncbi Bacillus cereus 03BB1025
BCER405917 Bacillus cereus W5
BCER315749 ncbi Bacillus cytotoxicus NVH 391-985
BCER288681 ncbi Bacillus cereus E33L5
BCER226900 ncbi Bacillus cereus ATCC 145796
BCEN331272 ncbi Burkholderia cenocepacia HI24246
BCEN331271 ncbi Burkholderia cenocepacia AU 10546
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB505
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6845
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
AVAR240292 ncbi Anabaena variabilis ATCC 294136
ASP62977 ncbi Acinetobacter sp. ADP16
AHYD196024 Aeromonas hydrophila dhakensis5
ACAU438753 ncbi Azorhizobium caulinodans ORS 5716
AAVE397945 ncbi Acidovorax citrulli AAC00-16
AAUR290340 ncbi Arthrobacter aurescens TC16


Names of the homologs of the genes in the group in each of these orgs
  G6478   G6477   G6476   G6219   G6217   EG12358   
YPSE349747 YPSIP31758_0353YPSIP31758_0354YPSIP31758_0355YPSIP31758_3936YPSIP31758_3938YPSIP31758_0356
YPSE273123 YPTB3605YPTB3604YPTB3603YPTB3720YPTB3722YPTB3602
YPES386656 YPDSF_0231YPDSF_0232YPDSF_0233YPDSF_0109YPDSF_0107YPDSF_0234
YPES377628 YPN_3546YPN_3545YPN_3544YPN_3883YPN_3885YPN_3543
YPES360102 YPA_3637YPA_3638YPA_3639YPA_3288YPA_3290YPA_3640
YPES214092 YPO3624YPO3625YPO3626YPO0184YPO0182YPO3627
YPES187410 Y0245Y0244Y0243Y3965Y3963Y0242
XAXO190486 XAC3198XAC0850XAC3197XAC3197XAC3196
XAUT78245 XAUT_1211XAUT_1213XAUT_1210XAUT_4051XAUT_2084XAUT_1209
VEIS391735 VEIS_4286VEIS_4284VEIS_4284VEIS_4286VEIS_1107
TFUS269800 TFU_1504TFU_1500TFU_1692TFU_1503TFU_1504
SSON300269 SSO_0939SSO_0937SSO_0345SSO_0343SSO_0936
SPRO399741 SPRO_1738SPRO_1737SPRO_1736SPRO_4564SPRO_4566SPRO_1735
SMEL266834 SMC02344SMB20571SMB21528SMB21526SMB20569
SMED366394 SMED_3147SMED_4214SMED_4861SMED_4859SMED_4216
SHIGELLA YCBOYCBNTAUCTAUCTAUAYCBE
SFLE373384 SFV_0940SFV_0939SFV_0936SFV_0331SFV_0329SFV_0935
SFLE198214 AAN42564.1AAN42563.1AAN42560.1AAN41912.1AAN41914.1AAN42559.1
SDYS300267 SDY_2320SDY_2322SDY_2323SDY_0503SDY_0505SDY_2324
SAVE227882 SAV1560SAV1561SAV1558SAV1558SAV1560SAV5417
RSPH349102 RSPH17025_0764RSPH17025_0765RSPH17025_0761RSPH17025_0763RSPH17025_0766
RSP101510 RHA1_RO07053RHA1_RO02416RHA1_RO00273RHA1_RO00273RHA1_RO06848RHA1_RO04956
RSOL267608 RSC1338RSC1339RSC1340RSC1340RSP1383RSC1341
RPOM246200 SPO_0674SPO_3618SPO_0676SPO_0674SPO_3619
RPAL316058 RPB_1487RPB_2837RPB_1488RPB_1487RPB_3335
RPAL316055 RPE_3192RPE_3193RPE_3194RPE_3194RPE_3192RPE_3195
RPAL258594 RPA2613RPA2612RPA2611RPA4162RPA2613RPA2610
RMET266264 RMET_1370RMET_1371RMET_1372RMET_1372RMET_1370RMET_1373
RLEG216596 RL2770RL2769RL2768PRL100237PRL100239RL2767
RFER338969 RFER_1778RFER_1777RFER_1776RFER_1776RFER_1779RFER_1775
REUT381666 H16_A2245H16_A2244H16_A2243H16_B0890H16_B0888H16_A2242
REUT264198 REUT_A1977REUT_A1976REUT_A1975REUT_A1470REUT_A1472REUT_A1974
RETL347834 RHE_PC00019RHE_CH02432RHE_PC00168RHE_PC00017RHE_PC00019RHE_CH03865
RDEN375451 RD1_2310RD1_0984RD1_0984RD1_0982RD1_4169
PSYR223283 PSPTO_0350PSPTO_3466PSPTO_5315PSPTO_5321PSPTO_5319PSPTO_5314
PSYR205918 PSYR_4824PSYR_3247PSYR_4875PSYR_4875PSYR_4876PSYR_4874
PPUT76869 PPUTGB1_0261PPUTGB1_0262PPUTGB1_0263PPUTGB1_0255PPUTGB1_0257PPUTGB1_0264
PPUT351746 PPUT_0252PPUT_0253PPUT_0254PPUT_0246PPUT_0248PPUT_0255
PPUT160488 PP_0237PP_0238PP_0239PP_0231PP_0233PP_0240
PNAP365044 PNAP_2419PNAP_2418PNAP_2417PNAP_0040PNAP_2420PNAP_2416
PMEN399739 PMEN_4323PMEN_4322PMEN_4321PMEN_4330PMEN_4323PMEN_4320
PFLU220664 PFL_5937PFL_5936PFL_5935PFL_0270PFL_0272PFL_5934
PFLU216595 PFLU4087PFLU5856PFLU5855PFLU0253PFLU0255PFLU5854
PFLU205922 PFL_5414PFL_5413PFL_5412PFL_0254PFL_0256PFL_5411
PENT384676 PSEEN0218PSEEN0219PSEEN0220PSEEN0211PSEEN0213PSEEN0221
PAER208964 PA3445PA3444PA3443PA3936PA3938PA3442
PAER208963 PA14_19540PA14_19560PA14_19570PA14_12960PA14_12920PA14_19580
OANT439375 OANT_4088OANT_3592OANT_3505OANT_3507OANT_3591
NWIN323098 NWI_0680NWI_0682NWI_0683NWI_0683NWI_0674NWI_0684
NFAR247156 NFA11560NFA12010NFA43390NFA43390NFA24440NFA18280
MVAN350058 MVAN_3411MVAN_1200MVAN_3413MVAN_0121MVAN_0122MVAN_3412
MTHE264732 MOTH_1973MOTH_1974MOTH_1974MOTH_1973MOTH_1979
MSP409 M446_5467M446_5022M446_5130M446_4508M446_5467M446_5129
MSP189918 MKMS_0114MKMS_0907MKMS_2628MKMS_0113MKMS_0114MKMS_2627
MSP164757 MJLS_0095MJLS_0896MJLS_2622MJLS_0094MJLS_0095MJLS_2621
MSP164756 MMCS_0105MMCS_0890MMCS_2583MMCS_0104MMCS_0105MMCS_2582
MSME246196 MSMEG_3852MSMEG_4539MSMEG_3854MSMEG_2101MSMEG_0114MSMEG_3853
MPET420662 MPE_A0114MPE_A0115MPE_A0116MPE_A0116MPE_A0113MPE_A0117
MMAG342108 AMB1854AMB1859AMB1855AMB1854AMB1865
MLOT266835 MLL4559MLR5216MLL4557MLR4519MLR4517MLL4555
MKAN190192 MK0601MK0602MK0602MK0601MK0603
MGIL350054 MFLV_0723MFLV_5136MFLV_3159MFLV_0724MFLV_0723MFLV_3158
MEXT419610 MEXT_3409MEXT_3408MEXT_3406MEXT_1261MEXT_3347MEXT_3407
MAVI243243 MAV_2435MAV_4628MAV_2433MAV_2433MAV_3400MAV_2434
MAER449447 MAE_09320MAE_29700MAE_18890MAE_18880MAE_14770
MABS561007 MAB_2218MAB_2219MAB_2216MAB_2176MAB_2177MAB_2217
LMES203120 LEUM_1151LEUM_1153LEUM_1153LEUM_1151LEUM_1152
KRAD266940 KRAD_4421KRAD_3993KRAD_4420KRAD_4420KRAD_0440
KPNE272620 GKPORF_B5403GKPORF_B5402GKPORF_B5401GKPORF_B4637GKPORF_B4635GKPORF_B5400
JSP375286 MMA_0739MMA_0740MMA_0741MMA_0741MMA_2619MMA_0742
JSP290400 JANN_1941JANN_3947JANN_3947JANN_3949JANN_3075
HAUR316274 HAUR_2789HAUR_2788HAUR_2787HAUR_2787HAUR_2789HAUR_2786
GVIO251221 GLL3107GLL4257GLL0173GLL0175GLL0174
GURA351605 GURA_3874GURA_3884GURA_3884GURA_3874GURA_3882
GTHE420246 GTNG_2611GTNG_2606GTNG_2610GTNG_2610GTNG_2611GTNG_2609
GBET391165 GBCGDNIH1_0257GBCGDNIH1_0256GBCGDNIH1_0539GBCGDNIH1_0539GBCGDNIH1_0257GBCGDNIH1_0538
FSP1855 FRANEAN1_3871FRANEAN1_4813FRANEAN1_3872FRANEAN1_1172FRANEAN1_0723
FSP106370 FRANCCI3_0251FRANCCI3_0250FRANCCI3_0250FRANCCI3_3571FRANCCI3_0249
FALN326424 FRAAL3342FRAAL4830FRAAL3341FRAAL3341FRAAL5770FRAAL0586
ESP42895 ENT638_1455ENT638_1454ENT638_1453ENT638_0840ENT638_0838ENT638_1452
EFER585054 EFER_1080EFER_1079EFER_1078EFER_2652EFER_2654EFER_1077
ECOO157 YCBOYCBNYCBMTAUCTAUAYCBE
ECOL83334 ECS1019ECS1018ECS1017ECS0421ECS0419ECS1016
ECOL585397 ECED1_0966ECED1_0965ECED1_0964ECED1_0394ECED1_0392ECED1_0963
ECOL585057 ECIAI39_2211ECIAI39_2212ECIAI39_2213ECIAI39_2213ECIAI39_0316ECIAI39_2214
ECOL585056 ECUMN_1132ECUMN_1131ECUMN_1130ECUMN_0407ECUMN_0405ECUMN_1129
ECOL585055 EC55989_0985EC55989_0984EC55989_0983EC55989_0374EC55989_0372EC55989_0982
ECOL585035 ECS88_0964ECS88_0963ECS88_0962ECS88_0364ECS88_0362ECS88_0961
ECOL585034 ECIAI1_0977ECIAI1_0976ECIAI1_0975ECIAI1_0366ECIAI1_0364ECIAI1_0974
ECOL481805 ECOLC_2660ECOLC_2661ECOLC_2662ECOLC_3261ECOLC_3263ECOLC_2663
ECOL469008 ECBD_2659ECBD_2660ECBD_2661ECBD_3294ECBD_3296ECBD_2662
ECOL439855 ECSMS35_2183ECSMS35_2184ECSMS35_2185ECSMS35_0396ECSMS35_0394ECSMS35_2186
ECOL413997 ECB_00940ECB_00939ECB_00938ECB_00317ECB_00315ECB_00937
ECOL409438 ECSE_0997ECSE_0996ECSE_0995ECSE_0389ECSE_0387ECSE_0994
ECOL405955 APECO1_48APECO1_47APECO1_46APECO1_1637APECO1_1639APECO1_45
ECOL364106 UTI89_C1008UTI89_C1007UTI89_C1006UTI89_C0386UTI89_C0384UTI89_C1005
ECOL362663 ECP_0948ECP_0947ECP_0946ECP_0430ECP_0948ECP_0945
ECOL331111 ECE24377A_1051ECE24377A_1037ECE24377A_1036ECE24377A_0391ECE24377A_0389ECE24377A_1035
ECOL316407 ECK0927:JW0919:B0936ECK0926:JW0918:B0935ECK0925:JW5121:B0934ECK0364:JW0359:B0367ECK0362:JW0357:B0365ECK0924:JW0916:B0933
ECOL199310 C1079C1078C1077C0475C0472C1076
ECAR218491 ECA4410ECA4411ECA4412ECA1529ECA1528ECA4413
DHAF138119 DSY2481DSY2483DSY2483DSY2481DSY4006
CSP78 CAUL_2662CAUL_2667CAUL_2657CAUL_2657CAUL_2658
CJAP155077 CJA_2256CJA_2322CJA_2323CJA_2257CJA_2256CJA_2343
CGLU196627 CG1380CG1376CG1377CG1380CG1379
BXEN266265 BXE_B3031BXE_B1542BXE_B2638BXE_B0692BXE_B0694BXE_C0982
BVIE269482 BCEP1808_5198BCEP1808_1526BCEP1808_1527BCEP1808_2980BCEP1808_2982BCEP1808_1528
BTHU412694 BALH_2613BALH_2611BALH_2612BALH_2612BALH_2613BALH_2614
BTHU281309 BT9727_2664BT9727_2662BT9727_2663BT9727_2663BT9727_2664
BTHA271848 BTH_II1469BTH_I2501BTH_I2500BTH_II0802BTH_II0800BTH_I2499
BSUI470137 BSUIS_B1417BSUIS_B0468BSUIS_B1419BSUIS_B1417BSUIS_B1418
BSUI204722 BR_A1186BR_A0467BR_A1188BR_A1186BR_A1187
BSUB BSU08840BSU08860BSU08850BSU08850BSU08840
BSP376 BRADO5913BRADO5912BRADO5911BRADO0682BRADO5913BRADO5910
BSP36773 BCEP18194_B1152BCEP18194_A4704BCEP18194_A4705BCEP18194_A6225BCEP18194_A6227BCEP18194_A4706
BPSE320373 BURPS668_A1350BURPS668_1821BURPS668_1822BURPS668_A2220BURPS668_A2222BURPS668_1823
BPSE320372 BURPS1710B_B2966BURPS1710B_A2147BURPS1710B_A2148BURPS1710B_B0740BURPS1710B_B0742BURPS1710B_A2149
BPSE272560 BPSS0928BPSL1858BPSL1857BPSS1572BPSS1574BPSL1856
BPET94624 BPET2401BPET2402BPET2403BPET2905BPET2401
BPER257313 BP0913BP3675BP3703BP3674BP0781
BPAR257311 BPP1386BPP0091BPP0091BPP0090BPP0343
BOVI236 GBOORFA1187GBOORFA0455GBOORFA0455GBOORFA1187GBOORFA1188
BMEL359391 BAB2_1146BAB2_0769BAB2_1148BAB2_1146BAB2_1147
BMEL224914 BMEII0109BMEII0799BMEII0107BMEII0109BMEII0108
BMAL320389 BMA10247_A1012BMA10247_0779BMA10247_0780BMA10247_A0697BMA10247_A0695BMA10247_0781
BMAL320388 BMASAVP1_0286BMASAVP1_A1725BMASAVP1_A1724BMASAVP1_A1724BMASAVP1_0286BMASAVP1_A1723
BMAL243160 BMA_A1303BMA_1239BMA_1238BMA_A1580BMA_A1582BMA_1237
BLIC279010 BL03205BL03203BL03204BL03204BL03205
BJAP224911 BLL7011BLL7010BLL7009BLL0111BLR5802BLL7008
BCLA66692 ABC0598ABC0599ABC0600ABC0600ABC3394ABC3717
BCER572264 BCA_2995BCA_2993BCA_2994BCA_2994BCA_2995
BCER405917 BCE_2960BCE_2958BCE_2959BCE_3060BCE_2960
BCER315749 BCER98_1999BCER98_1997BCER98_1998BCER98_1998BCER98_1999
BCER288681 BCE33L2641BCE33L2639BCE33L2640BCE33L2748BCE33L2641
BCER226900 BC_2911BC_2909BC_2910BC_2910BC_2911BC_2912
BCEN331272 BCEN2424_4671BCEN2424_1562BCEN2424_1563BCEN2424_2884BCEN2424_2886BCEN2424_1564
BCEN331271 BCEN_3697BCEN_1082BCEN_1083BCEN_2269BCEN_2271BCEN_1084
BCAN483179 BCAN_B1217BCAN_B0469BCAN_B1219BCAN_B1217BCAN_B1218
BBRO257310 BB1073BB1071BB4309BB0089BB4307
BANT592021 BAA_2975BAA_2973BAA_2974BAA_2974BAA_2975
BANT568206 BAMEG_1683BAMEG_1685BAMEG_1684BAMEG_1684BAMEG_1683
BANT261594 GBAA2921GBAA2919GBAA2920GBAA2920GBAA2921
BANT260799 BAS2713BAS2711BAS2712BAS2712BAS2713
BAMY326423 RBAM_009120RBAM_009140RBAM_009130RBAM_009130RBAM_009120
BAMB398577 BAMMC406_4519BAMMC406_1484BAMMC406_1485BAMMC406_1485BAMMC406_4519BAMMC406_1486
BAMB339670 BAMB_4061BAMB_1463BAMB_1464BAMB_1464BAMB_4061BAMB_1465
BABO262698 BRUAB2_1122BRUAB2_0755BRUAB2_1124BRUAB2_1122BRUAB2_1123
AVAR240292 AVA_4154AVA_5016AVA_4139AVA_4139AVA_4154AVA_4138
ASP62977 ACIAD0037ACIAD0036ACIAD0035ACIAD0035ACIAD0038ACIAD0034
AHYD196024 AHA_2936AHA_2938AHA_2938AHA_2936AHA_3409
ACAU438753 AZC_3160AZC_3157AZC_3161AZC_3161AZC_3160AZC_3162
AAVE397945 AAVE_3045AAVE_3044AAVE_3042AAVE_0047AAVE_3045AAVE_3041
AAUR290340 AAUR_3088AAUR_3445AAUR_1440AAUR_3008AAUR_3088AAUR_1439


Organism features enriched in list (features available for 141 out of the 153 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:Anthrax 0.003311744
Disease:Brucellosis 0.000783655
Disease:Bubonic_plague 0.003595356
Disease:Dysentery 0.003595356
Disease:Opportunistic_infections 0.000783655
Endospores:No 6.807e-630211
Endospores:Yes 0.00834762053
GC_Content_Range4:0-40 1.126e-1811213
GC_Content_Range4:60-100 6.100e-1470145
GC_Content_Range7:30-40 1.036e-1111166
GC_Content_Range7:40-50 0.001954417117
GC_Content_Range7:50-60 0.000020643107
GC_Content_Range7:60-70 7.331e-1365134
Genome_Size_Range5:0-2 4.411e-211155
Genome_Size_Range5:2-4 8.470e-1315197
Genome_Size_Range5:4-6 1.200e-1888184
Genome_Size_Range5:6-10 1.700e-163747
Genome_Size_Range9:1-2 1.071e-161128
Genome_Size_Range9:2-3 7.947e-133120
Genome_Size_Range9:4-5 0.00239023496
Genome_Size_Range9:5-6 2.484e-165488
Genome_Size_Range9:6-8 7.202e-163238
Gram_Stain:Gram_Neg 0.002389894333
Habitat:Aquatic 0.0000378891
Habitat:Host-associated 0.000417934206
Habitat:Multiple 6.016e-869178
Habitat:Specialized 0.0083395653
Habitat:Terrestrial 0.00047351631
Motility:No 0.000028119151
Motility:Yes 0.000260382267
Optimal_temp.:- 0.005505374257
Optimal_temp.:25-30 0.00115561119
Oxygen_Req:Anaerobic 2.438e-103102
Oxygen_Req:Facultative 0.005722060201
Pathogenic_in:Animal 0.00685782466
Pathogenic_in:No 0.001913941226
Shape:Coccus 0.0002616882
Shape:Rod 1.967e-12118347
Shape:Spiral 0.0006935134
Temp._range:Mesophilic 0.0000240130473



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 386
Effective number of orgs (counting one per cluster within 468 clusters): 297

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
XFAS405440 ncbi Xylella fastidiosa M120
XFAS183190 ncbi Xylella fastidiosa Temecula10
XFAS160492 ncbi Xylella fastidiosa 9a5c0
XCAM487884 Xanthomonas campestris pv. paulliniae1
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-101
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80040
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339130
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VVUL216895 ncbi Vibrio vulnificus CMCP60
VVUL196600 ncbi Vibrio vulnificus YJ0160
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106330
VFIS312309 ncbi Vibrio fischeri ES1140
VCHO345073 ncbi Vibrio cholerae O3950
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169610
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB271
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TSP28240 Thermotoga sp.0
TSP1755 Thermoanaerobacter sp.0
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332230
TPET390874 ncbi Thermotoga petrophila RKU-10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354050
TCRU317025 ncbi Thiomicrospira crunogena XCL-21
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT20
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP94122 ncbi Shewanella sp. ANA-30
SSP64471 ncbi Synechococcus sp. CC93110
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)1
SSP321327 ncbi Synechococcus sp. JA-3-3Ab1
SSOL273057 ncbi Sulfolobus solfataricus P20
SSED425104 ncbi Shewanella sediminis HAW-EB30
SRUB309807 ncbi Salinibacter ruber DSM 138551
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SPEA398579 ncbi Shewanella pealeana ATCC 7003450
SONE211586 ncbi Shewanella oneidensis MR-10
SMUT210007 ncbi Streptococcus mutans UA1591
SMAR399550 ncbi Staphylothermus marinus F10
SLOI323850 ncbi Shewanella loihica PV-40
SLAC55218 Ruegeria lacuscaerulensis1
SHAL458817 ncbi Shewanella halifaxensis HAW-EB40
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SGOR29390 Streptococcus gordonii Challis0
SGLO343509 ncbi Sodalis glossinidius morsitans0
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4760
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B670
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91500
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT180
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty20
SELO269084 ncbi Synechococcus elongatus PCC 63011
SDEN318161 ncbi Shewanella denitrificans OS2170
SDEG203122 ncbi Saccharophagus degradans 2-400
SBAL402882 ncbi Shewanella baltica OS1850
SBAL399599 ncbi Shewanella baltica OS1950
SALA317655 ncbi Sphingopyxis alaskensis RB22561
SAGA211110 ncbi Streptococcus agalactiae NEM3160
SAGA208435 ncbi Streptococcus agalactiae 2603V/R0
SAGA205921 ncbi Streptococcus agalactiae A9090
SACI56780 ncbi Syntrophus aciditrophicus SB1
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.11
RSP357808 ncbi Roseiflexus sp. RS-10
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111700
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PTHE370438 ncbi Pelotomaculum thermopropionicum SI1
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PSP117 Pirellula sp.0
PRUM264731 ncbi Prevotella ruminicola 230
PPRO298386 ncbi Photobacterium profundum SS90
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMUL272843 ncbi Pasteurella multocida multocida Pm700
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO11
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1250
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PCRY335284 ncbi Psychrobacter cryohalolentis K50
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PATL342610 ncbi Pseudoalteromonas atlantica T6c0
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM21
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
OIHE221109 ncbi Oceanobacillus iheyensis HTE8311
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP35761 Nocardioides sp.1
NSP103690 ncbi Nostoc sp. PCC 71201
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197070
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NMEN374833 ncbi Neisseria meningitidis 0534420
NMEN272831 ncbi Neisseria meningitidis FAM180
NMEN122587 ncbi Neisseria meningitidis Z24910
NMEN122586 ncbi Neisseria meningitidis MC580
NHAM323097 ncbi Nitrobacter hamburgensis X140
NGON242231 ncbi Neisseria gonorrhoeae FA 10900
NEUT335283 ncbi Nitrosomonas eutropha C910
NEUR228410 ncbi Nitrosomonas europaea ATCC 197180
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124441
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E0
MSP400668 ncbi Marinomonas sp. MWYL10
MSP266779 ncbi Chelativorans sp. BNC10
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAR394221 ncbi Maricaulis maris MCS100
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAQU351348 ncbi Marinobacter aquaeolei VT81
MACE188937 ncbi Methanosarcina acetivorans C2A1
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSPH444177 ncbi Lysinibacillus sphaericus C3-410
LSAK314315 ncbi Lactobacillus sakei sakei 23K0
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)0
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)0
LACI272621 ncbi Lactobacillus acidophilus NCFM0
ILOI283942 ncbi Idiomarina loihiensis L2TR0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium1
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMOD498761 ncbi Heliobacterium modesticaldum Ice10
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HHAL349124 ncbi Halorhodospira halophila SL10
HDUC233412 ncbi Haemophilus ducreyi 35000HP1
HCHE349521 ncbi Hahella chejuensis KCTC 23960
HBUT415426 ncbi Hyperthermus butylicus DSM 54561
HARS204773 ncbi Herminiimonas arsenicoxydans0
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GSUL243231 ncbi Geobacter sulfurreducens PCA1
GOXY290633 ncbi Gluconobacter oxydans 621H0
GKAU235909 ncbi Geobacillus kaustophilus HTA4260
GFOR411154 ncbi Gramella forsetii KT08030
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-000
FTUL418136 ncbi Francisella tularensis tularensis WY96-34180
FTUL401614 ncbi Francisella novicida U1120
FTUL393115 ncbi Francisella tularensis tularensis FSC1980
FTUL393011 ncbi Francisella tularensis holarctica OSU180
FTUL351581 Francisella tularensis holarctica FSC2000
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S851
FRANT ncbi Francisella tularensis tularensis SCHU S40
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250170
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ELIT314225 ncbi Erythrobacter litoralis HTCC25940
EFAE226185 ncbi Enterococcus faecalis V5830
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRAD243230 ncbi Deinococcus radiodurans R11
DOLE96561 ncbi Desulfococcus oleovorans Hxd31
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DETH243164 ncbi Dehalococcoides ethenogenes 1950
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G201
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSAL290398 ncbi Chromohalobacter salexigens DSM 30431
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1010
CPER195103 ncbi Clostridium perfringens ATCC 131240
CPER195102 ncbi Clostridium perfringens 130
CNOV386415 ncbi Clostridium novyi NT0
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF81
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29010
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto0
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6570
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBOT498213 ncbi Clostridium botulinum B1 str. Okra0
CBOT441772 ncbi Clostridium botulinum F str. Langeland0
CBOT441771 ncbi Clostridium botulinum A str. Hall0
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193970
CBOT36826 Clostridium botulinum A0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB151
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
CABO218497 ncbi Chlamydophila abortus S26/30
BWEI315730 ncbi Bacillus weihenstephanensis KBAB41
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BPUM315750 ncbi Bacillus pumilus SAFR-0320
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP232721 ncbi Acidovorax sp. JS420
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4490
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL030
APLE416269 ncbi Actinobacillus pleuropneumoniae L200
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs1
ANAE240017 Actinomyces oris MG11
AMET293826 ncbi Alkaliphilus metalliredigens QYMF0
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
ACRY349163 ncbi Acidiphilium cryptum JF-50
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
ABUT367737 ncbi Arcobacter butzleri RM40180
ABOR393595 ncbi Alcanivorax borkumensis SK20
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G6478   G6477   G6476   G6219   G6217   EG12358   
XORY360094
XORY342109
XORY291331
XFAS405440
XFAS183190
XFAS160492
XCAM487884 XCC-B100_3580
XCAM316273 XCAORF_0952
XCAM314565
XCAM190485
WSUC273121
WPIP955
WPIP80849
VVUL216895
VVUL196600
VPAR223926
VFIS312309
VCHO345073
VCHO
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TVOL273116
TTUR377629
TTHE300852
TTHE262724 TT_C0419
TTEN273068
TSP28240
TSP1755
TPSE340099
TPET390874
TPEN368408
TPAL243276
TMAR243274
TLET416591
TKOD69014
TERY203124
TELO197221 TLR2003
TDEN326298
TDEN292415
TDEN243275
TCRU317025 TCR_1788
TACI273075
SWOL335541
STYP99287
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296 SSU98_0217
SSUI391295 SSU05_0218
SSP94122
SSP64471
SSP387093
SSP321332 CYB_0602
SSP321327 CYA_0892
SSOL273057
SSED425104
SRUB309807 SRU_2328
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SPEA398579
SONE211586
SMUT210007 SMU_652C
SMAR399550
SLOI323850
SLAC55218 SL1157_1359
SHAL458817
SHAE279808
SGOR29390
SGLO343509
SEPI176280
SEPI176279
SENT454169
SENT321314
SENT295319
SENT220341
SENT209261
SELO269084 SYC2476_D
SDEN318161
SDEG203122
SBAL402882
SBAL399599
SALA317655 SALA_1660
SAGA211110
SAGA208435
SAGA205921
SACI56780 SYN_00367
SACI330779
RTYP257363
RSPH272943 RSP_2596
RSP357808
RRUB269796
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAS383372 RCAS_0668
RCAN293613
RBEL391896
RBEL336407
RALB246199 GRAORF_0459
RAKA293614
PTOR263820
PTHE370438 PTH_0235
PSP56811
PSP312153
PSP117
PRUM264731
PPRO298386
PPEN278197
PMUL272843
PMOB403833
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225
PLUM243265 PLU3815
PISL384616 PISL_1258
PINT246198
PHOR70601
PHAL326442
PGIN242619
PFUR186497
PDIS435591
PCRY335284
PCAR338963
PATL342610
PAST100379
PARS340102 PARS_0282
PARC259536
PAER178306 PAE1066
PACN267747
PABY272844
OTSU357244
OIHE221109 OB3078
NSP387092
NSP35761 NOCA_2683
NSP103690 ALR0611
NSEN222891
NPHA348780
NOCE323261
NMUL323848
NMEN374833
NMEN272831
NMEN122587
NMEN122586
NHAM323097
NGON242231
NEUT335283
NEUR228410
NARO279238 SARO_2443
MTUB419947 MRA_0801
MTUB336982 TBFG_10807
MTHE187420
MTBRV RV0791C
MTBCDC MT0816
MSYN262723
MSUC221988
MSP400668
MSP266779
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAR394221
MLEP272631
MLAB410358
MHYO295358
MHYO262722
MHYO262719
MGEN243273
MFLO265311
MCAP340047
MCAP243233
MBUR259564 MBUR_2132
MBOV410289 BCG_0844C
MBOV233413 MB0815C
MART243272
MAQU351348 MAQU_3665
MACE188937 MA0064
LXYL281090
LWEL386043
LSPH444177
LSAK314315
LREU557436
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LPLA220668
LMON265669
LMON169963
LLAC272623
LLAC272622
LJOH257314
LINT363253
LINT267671
LINT189518
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LBRE387344
LBOR355277
LBOR355276
LBIF456481
LBIF355278
LACI272621
ILOI283942
IHOS453591
HWAL362976 HQ2632A
HSP64091
HSOM228400
HSOM205914
HSAL478009
HPYL85963
HPYL357544
HPY
HNEP81032 HNE_1252
HMUK485914
HMOD498761
HMAR272569
HINF71421
HINF374930
HINF281310
HHEP235279 HH_1212
HHAL349124
HDUC233412 HD_0572
HCHE349521
HBUT415426 HBUT_1453
HARS204773
HACI382638
GSUL243231 GSU_1147
GOXY290633
GKAU235909
GFOR411154
FTUL458234
FTUL418136
FTUL401614
FTUL393115
FTUL393011
FTUL351581
FSUC59374 FSU1542
FRANT
FPHI484022
FNUC190304
FNOD381764
FMAG334413
FJOH376686
ERUM302409
ERUM254945
ELIT314225
EFAE226185
ECHA205920
ECAN269484
DVUL882
DSP255470
DSP216389
DRAD243230 DR_1277
DOLE96561 DOLE_0213
DNOD246195
DETH243164
DDES207559 DDE_3670
CVES412965
CTRA471473
CTRA471472
CTEP194439
CSUL444179
CSAL290398 CSAL_0181
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPHY357809
CPER289380
CPER195103
CPER195102
CNOV386415
CMUR243161
CMAQ397948
CKOR374847 KCR_0482
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537
CHYD246194
CHUT269798
CHOM360107
CFET360106
CFEL264202
CEFF196164
CDIP257309
CDES477974
CCUR360105
CCHL340177
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT536232
CBOT515621
CBOT508765
CBOT498213
CBOT441772
CBOT441771
CBOT441770
CBOT36826
CBLO291272
CBLO203907
CAULO CC1169
CACE272562 CAC0106
CABO218497
BWEI315730 BCERKBAB4_0878
BTUR314724
BTRI382640
BTHE226186
BSP107806
BQUI283165
BPUM315750
BLON206672
BHER314723
BHEN283166
BGAR290434
BFRA295405
BFRA272559
BCIC186490
BBUR224326
BBAC360095
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AURANTIMONAS
ASP232721
ASAL382245
APLE434271
APLE416269
APHA212042
APER272557
AORE350688 CLOS_0304
ANAE240017 ANA_0839
AMET293826
AMAR234826
ALAI441768
AFUL224325
AFER243159
ACRY349163
ACEL351607
ABUT367737
ABOR393595
AAEO224324


Organism features enriched in list (features available for 363 out of the 386 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.0001603317
Arrangment:Pairs 0.002036057112
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.0030736211
Disease:Wide_range_of_infections 0.00514511111
Endospores:No 0.0083734143211
Endospores:Yes 0.00067762253
GC_Content_Range4:0-40 7.476e-15175213
GC_Content_Range4:60-100 1.141e-1648145
GC_Content_Range7:0-30 0.00006814147
GC_Content_Range7:30-40 1.390e-9134166
GC_Content_Range7:40-50 0.000393188117
GC_Content_Range7:50-60 0.000265151107
GC_Content_Range7:60-70 9.036e-1348134
Genome_Size_Range5:0-2 1.867e-24145155
Genome_Size_Range5:2-4 0.0000178145197
Genome_Size_Range5:4-6 2.963e-1867184
Genome_Size_Range5:6-10 3.345e-13647
Genome_Size_Range9:0-1 1.903e-62727
Genome_Size_Range9:1-2 9.443e-18118128
Genome_Size_Range9:2-3 5.298e-695120
Genome_Size_Range9:4-5 1.404e-63996
Genome_Size_Range9:5-6 2.453e-102888
Genome_Size_Range9:6-8 1.414e-9638
Habitat:Host-associated 0.0000159151206
Habitat:Multiple 4.930e-687178
Habitat:Specialized 0.00113054353
Habitat:Terrestrial 0.0000208831
Motility:Yes 0.0014269150267
Optimal_temp.:25-30 0.0011081519
Optimal_temp.:37 0.002413278106
Oxygen_Req:Anaerobic 0.000785677102
Shape:Rod 9.645e-6192347
Shape:Spiral 0.00001353234
Temp._range:Hyperthermophilic 0.00147392123
Temp._range:Mesophilic 0.0000161276473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 1
Effective number of orgs (counting one per cluster within 468 clusters): 1

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
MKAN190192 ncbi Methanopyrus kandleri AV19 0.00194972905


Names of the homologs of the genes in the group in each of these orgs
  G6478   G6477   G6476   G6219   G6217   EG12358   
MKAN190192 MK0601MK0602MK0602MK0601MK0603


Organism features enriched in list (features available for 1 out of the 1 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Optimal_temp.:98 0.003430512



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
ALKANEMONOX-PWY (two-component alkanesulfonate monooxygenase)93790.5877
PWY0-981 (taurine degradation IV)106850.5852
GALACTARDEG-PWY (D-galactarate degradation I)151960.5127
GLUCARDEG-PWY (D-glucarate degradation I)152950.5007
P344-PWY (acrylonitrile degradation)2101150.5004
PWY-561 (superpathway of glyoxylate cycle)162970.4864
GLYOXYLATE-BYPASS (glyoxylate cycle)169980.4738
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)135850.4693
CATECHOL-ORTHO-CLEAVAGE-PWY (catechol degradation to β-ketoadipate)103710.4588
KETOGLUCONMET-PWY (ketogluconate metabolism)103710.4588
GALACTCAT-PWY (D-galactonate degradation)104710.4546
GLUTAMINDEG-PWY (glutamine degradation I)1911030.4537
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111370.4521
GLYCOLATEMET-PWY (glycolate and glyoxylate degradation I)2701260.4492
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation)2121090.4481
IDNCAT-PWY (L-idonate degradation)2461190.4469
PWY-5697 (allantoin degradation to ureidoglycolate I (urea producing))92650.4457
PWY-5148 (acyl-CoA hydrolysis)2271130.4436
PWY-6185 (4-methylcatechol degradation (ortho cleavage))107700.4323
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)149860.4319
P345-PWY (aldoxime degradation)2981310.4316
CYANCAT-PWY (cyanate degradation)94640.4263
CHOLINE-BETAINE-ANA-PWY (choline degradation I)135800.4240
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))138810.4231
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3651450.4191
PWY0-823 (arginine degradation III (arginine decarboxylase/agmatinase pathway))2451150.4186
CRNFORCAT-PWY (creatinine degradation I)191980.4132
GALLATE-DEGRADATION-I-PWY (gallate degradation I)83580.4128
4-HYDROXYMANDELATE-DEGRADATION-PWY (4-hydroxymandelate degradation)102660.4127
PWY-6089 (3-chlorocatechol degradation I (ortho))102660.4127
VALDEG-PWY (valine degradation I)2901260.4095
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001280.4054
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112690.4030



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6477   G6476   G6219   G6217   EG12358   
G64780.9995560.9997570.9994960.9996050.99958
G64770.9995880.9985950.9989140.999406
G64760.9996710.9994470.999772
G62190.9997340.999335
G62170.999103
EG12358



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PAIRWISE BLAST SCORES:

  G6478   G6477   G6476   G6219   G6217   EG12358   
G64780.0f0-----
G6477-0.0f0----
G6476--0.0f01.4e-30--
G6219--5.7e-320.0f0--
G62171.2e-8---0.0f0-
EG12358-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- ABC-64-CPLX (taurine ABC transporter) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.333, average score: 1.000)
  Genes in pathway or complex:
             0.9966 0.9830 G6218 (tauB) TAUB-MONOMER (TauB)
   *in cand* 0.9995 0.9986 G6219 (tauC) TAUC-MONOMER (TauC)
   *in cand* 0.9995 0.9989 G6217 (tauA) TAUA-MONOMER (TauA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9991 EG12358 (ssuB) YCBE-MONOMER (SsuB)
   *in cand* 0.9997 0.9994 G6476 (ssuC) YCBM-MONOMER (SsuC)
   *in cand* 0.9993 0.9986 G6477 (ssuD) MONOMER-162 (alkanesulfonate monooxygenase)
   *in cand* 0.9997 0.9995 G6478 (ssuA) G6478-MONOMER (SsuA)

- ABC-56-CPLX (aliphatic sulfonate ABC transporter) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.500, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9991 EG12358 (ssuB) YCBE-MONOMER (SsuB)
   *in cand* 0.9997 0.9994 G6476 (ssuC) YCBM-MONOMER (SsuC)
   *in cand* 0.9997 0.9995 G6478 (ssuA) G6478-MONOMER (SsuA)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9989 G6217 (tauA) TAUA-MONOMER (TauA)
   *in cand* 0.9995 0.9986 G6219 (tauC) TAUC-MONOMER (TauC)
   *in cand* 0.9993 0.9986 G6477 (ssuD) MONOMER-162 (alkanesulfonate monooxygenase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G6217 G6219 (centered at G6219)
EG12358 G6476 G6477 G6478 (centered at G6477)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6478   G6477   G6476   G6219   G6217   EG12358   
173/623161/623208/623218/623197/623211/623
AAUR290340:2:Tyes160219581152616020
AAVE397945:0:Tyes295029492947029502946
ABAC204669:0:Tyes----01
ABAU360910:0:Tyes-1202---0
ACAU438753:0:Tyes304435
ADEH290397:0:Tyes0-11-2
AEHR187272:0:Tyes---1-0
AHYD196024:0:Tyes0-220458
AMAR329726:9:Tyes----02
ANAE240017:0:Tyes-----0
AORE350688:0:Tyes-----0
ASP1667:3:Tyes-0253225323277-
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