CANDIDATE ID: 380

CANDIDATE ID: 380

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9950180e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:   4.8345667e-36

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7107 (wza) (b2062)
   Products of gene:
     - G7107-MONOMER (lipoprotein required for capsular polysaccharide translocation through the outer membrane)
     - CPLX0-7529 (capsular polysaccharide export apparatus)

- G7106 (wzb) (b2061)
   Products of gene:
     - G7106-MONOMER (tyrosine phosphatase)
       Reactions:
        a protein-L-tyrosine phosphate + H2O  ->  phosphate + a protein L-tyrosine

- G7105 (wzc) (b2060)
   Products of gene:
     - G7105-MONOMER (tyrosine kinase involved in colanic acid biosynthesis)
       Reactions:
        ATP + a protein L-tyrosine  =  a protein-L-tyrosine phosphate + ADP
     - CPLX0-7529 (capsular polysaccharide export apparatus)

- G6504 (gfcE) (b0983)
   Products of gene:
     - G6504-MONOMER (predicted exopolysaccharide export protein)

- G6503 (etp) (b0982)
   Products of gene:
     - G6503-MONOMER (phosphotyrosine-protein phosphatase)
       Reactions:
        a protein-L-tyrosine phosphate + H2O  ->  phosphate + a protein L-tyrosine

- EG11826 (etk) (b0981)
   Products of gene:
     - EG11826-MONOMER (autophosphorylating protein tyrosine kinase)
       Reactions:
        ATP + a protein L-tyrosine  ->  ADP + a protein-L-tyrosine phosphate



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 122
Effective number of orgs (counting one per cluster within 468 clusters): 86

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1146
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TERY203124 ncbi Trichodesmium erythraeum IMS1016
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252596
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
SSON300269 ncbi Shigella sonnei Ss0466
SPRO399741 ncbi Serratia proteamaculans 5686
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SBOY300268 ncbi Shigella boydii Sb2276
SALA317655 ncbi Sphingopyxis alaskensis RB22565
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170256
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170295
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.16
RSOL267608 ncbi Ralstonia solanacearum GMI10006
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111706
RMET266264 ncbi Ralstonia metallidurans CH346
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38415
RFER338969 ncbi Rhodoferax ferrireducens T1185
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1346
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP56811 Psychrobacter sp.6
PSP117 Pirellula sp.5
PPRO298386 ncbi Photobacterium profundum SS96
PNAP365044 ncbi Polaromonas naphthalenivorans CJ26
PMUL272843 ncbi Pasteurella multocida multocida Pm706
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PGIN242619 ncbi Porphyromonas gingivalis W835
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PDIS435591 ncbi Parabacteroides distasonis ATCC 85036
PCRY335284 ncbi Psychrobacter cryohalolentis K56
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PARC259536 ncbi Psychrobacter arcticus 273-46
NSP103690 ncbi Nostoc sp. PCC 71206
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251966
NEUT335283 ncbi Nitrosomonas eutropha C916
NEUR228410 ncbi Nitrosomonas europaea ATCC 197186
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124446
MSP266779 ncbi Chelativorans sp. BNC16
MPET420662 ncbi Methylibium petroleiphilum PM16
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MAER449447 ncbi Microcystis aeruginosa NIES-8436
LCHO395495 ncbi Leptothrix cholodnii SP-66
HCHE349521 ncbi Hahella chejuensis KCTC 23966
GVIO251221 ncbi Gloeobacter violaceus PCC 74216
GURA351605 ncbi Geobacter uraniireducens Rf46
GFOR411154 ncbi Gramella forsetii KT08036
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S856
FJOH376686 ncbi Flavobacterium johnsoniae UW1016
ESP42895 Enterobacter sp.6
ELIT314225 ncbi Erythrobacter litoralis HTCC25946
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
CSP501479 Citreicella sp. SE456
CSAL290398 ncbi Chromohalobacter salexigens DSM 30436
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CJAP155077 Cellvibrio japonicus5
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334066
BXEN266265 ncbi Burkholderia xenovorans LB4006
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54825
BTHA271848 ncbi Burkholderia thailandensis E2646
BSP36773 Burkholderia sp.6
BPSE320373 ncbi Burkholderia pseudomallei 6686
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962436
BMAL320389 ncbi Burkholderia mallei NCTC 102476
BMAL320388 ncbi Burkholderia mallei SAVP16
BMAL243160 ncbi Burkholderia mallei ATCC 233446
BFRA295405 ncbi Bacteroides fragilis YCH465
BFRA272559 ncbi Bacteroides fragilis NCTC 93435
BCEN331272 ncbi Burkholderia cenocepacia HI24246
BCEN331271 ncbi Burkholderia cenocepacia AU 10546
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
AVAR240292 ncbi Anabaena variabilis ATCC 294136
ASP76114 ncbi Aromatoleum aromaticum EbN16
ASP62977 ncbi Acinetobacter sp. ADP16
ASP62928 ncbi Azoarcus sp. BH726
AMAR329726 ncbi Acaryochloris marina MBIC110176
AHYD196024 Aeromonas hydrophila dhakensis6
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-16
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C6
ABOR393595 ncbi Alcanivorax borkumensis SK26
ABAU360910 ncbi Bordetella avium 197N6


Names of the homologs of the genes in the group in each of these orgs
  G7107   G7106   G7105   G6504   G6503   EG11826   
VVUL216895 VV1_0786VV1_0783VV1_0781VV1_0786VV1_0783VV1_0781
VVUL196600 VV0337VV0339VV0340VV0337VV0339VV0340
VPAR223926 VPA1602VPA1603VPA1604VPA1602VPA1603VPA1604
VFIS312309 VF0162VF0164VF0165VF0162VF0164VF0165
VCHO345073 VC0395_A0460VC0395_A0559VC0395_A0461VC0395_A0460VC0395_A0559VC0395_A0461
VCHO VC0936VC1041VC0937VC0936VC1041VC0937
TERY203124 TERY_1924TERY_4026TERY_1925TERY_1924TERY_4026TERY_1925
TDEN292415 TBD_1795TBD_1565TBD_1793TBD_1795TBD_1565TBD_1793
STYP99287 STM2118STM2117STM2116STM2118STM2117STM2116
SSON300269 SSO_2115SSO_2114SSO_2113SSO_2115SSO_0989SSO_2113
SPRO399741 SPRO_2894SPRO_1584SPRO_2893SPRO_1583SPRO_1584SPRO_2893
SHIGELLA WZAWZBS2248WZAYCCYS2248
SGLO343509 SG0978SG0979SG0980SG0978SG0979SG0980
SFLE373384 SFV_0992SFV_2120SFV_0990SFV_0992SFV_0991SFV_0990
SFLE198214 AAN43663.1AAN43662.1AAN43661.1AAN43663.1AAN42612.1AAN43661.1
SENT454169 SEHA_C2344SEHA_C2343SEHA_C2342SEHA_C2344SEHA_C2343SEHA_C2342
SENT321314 SCH_2119SCH_2118SCH_2117SCH_2119SCH_2118SCH_2117
SENT295319 SPA0748SPA0749SPA0750SPA0748SPA0749SPA0750
SENT220341 STY2331STY2330STY2329STY2331STY2330STY2329
SENT209261 T0754T0755T0756T0754T0755T0756
SDYS300267 SDY_0959SDY_0958SDY_0957SDY_0959SDY_0958SDY_0957
SBOY300268 SBO_2247SBO_0888SBO_2249SBO_2247SBO_2248SBO_2249
SALA317655 SALA_1928SALA_1583SALA_1928SALA_0815SALA_1583
RSPH349102 RSPH17025_4093RSPH17025_4094RSPH17025_4095RSPH17025_4093RSPH17025_4094RSPH17025_4095
RSPH349101 RSPH17029_2418RSPH17029_4051RSPH17029_3692RSPH17029_2418RSPH17029_3692
RSPH272943 RSP_4086RSP_4085RSP_4084RSP_4086RSP_4085RSP_4084
RSOL267608 RSP1020RSP1019RSP1018RSP1020RSP1019RSP1018
RRUB269796 RRU_A3117RRU_A3646RRU_A1490RRU_A3117RRU_A3646RRU_A1490
RMET266264 RMET_5851RMET_5850RMET_5849RMET_5851RMET_5850RMET_5849
RLEG216596 RL3664RL4527RL3662RL3664RL4527
RFER338969 RFER_0658RFER_0657RFER_0660RFER_0658RFER_0657
REUT381666 H16_B0024H16_B0023H16_B0022H16_B0024H16_B0023H16_B0036
REUT264198 REUT_B5370REUT_B5369REUT_B5368REUT_B5370REUT_B5369REUT_B5368
PSYR223283 PSPTO_3450PSPTO_3442PSPTO_3443PSPTO_3450PSPTO_3442PSPTO_3443
PSYR205918 PSYR_3232PSYR_3224PSYR_3225PSYR_3232PSYR_3224PSYR_3225
PSTU379731 PST_2501PST_2492PST_1759PST_2501PST_2492PST_2493
PSP56811 PSYCPRWF_0253PSYCPRWF_0252PSYCPRWF_0251PSYCPRWF_0253PSYCPRWF_0252PSYCPRWF_0251
PSP117 RB1329RB10818RB2464RB10818RB2464
PPRO298386 PBPRA2688PBPRA2687PBPRA2686PBPRA2688PBPRA2687PBPRA2686
PNAP365044 PNAP_3196PNAP_3195PNAP_3132PNAP_3196PNAP_3195PNAP_3194
PMUL272843 PM1016PM1017PM1018PM1016PM1017PM1018
PLUM243265 PLU3745PLU3744PLU3743PLU3745PLU3744PLU3743
PHAL326442 PSHAA0398PSHAA0527PSHAA1780PSHAA0398PSHAA0527PSHAA1780
PGIN242619 PG_0437PG_1641PG_0436PG_0437PG_0436
PFLU216595 PFLU3662PFLU3678PFLU3677PFLU3662PFLU3678PFLU3677
PFLU205922 PFL_3833PFL_3845PFL_3844PFL_3833PFL_3845PFL_3844
PDIS435591 BDI_1473BDI_2297BDI_0018BDI_1146BDI_2297BDI_2223
PCRY335284 PCRYO_0609PCRYO_0610PCRYO_0611PCRYO_0609PCRYO_0610PCRYO_0611
PATL342610 PATL_1170PATL_1706PATL_4000PATL_1170PATL_1706PATL_1073
PARC259536 PSYC_0647PSYC_0648PSYC_0649PSYC_0647PSYC_0648PSYC_0649
NSP103690 ALL4388ALR5068ALR2856ALL4388ALR5068ALR2856
NOCE323261 NOC_1985NOC_2842NOC_1497NOC_1985NOC_1497
NMUL323848 NMUL_A0242NMUL_A1063NMUL_A0244NMUL_A0242NMUL_A1063NMUL_A0244
NEUT335283 NEUT_2119NEUT_2118NEUT_2120NEUT_2119NEUT_0914NEUT_2120
NEUR228410 NE2279NE2278NE2280NE2279NE2278NE2280
NARO279238 SARO_0753SARO_1047SARO_3224SARO_0753SARO_1047SARO_3224
MSP266779 MESO_2754MESO_3348MESO_0660MESO_2754MESO_3348MESO_0660
MPET420662 MPE_A2734MPE_A2264MPE_A0736MPE_A2734MPE_A2264MPE_A0736
MLOT266835 MLL8437MLL4349MLL8437MLL4349MLR5276
MAER449447 MAE_41410MAE_00280MAE_32940MAE_41410MAE_00280MAE_32940
LCHO395495 LCHO_3509LCHO_1049LCHO_2365LCHO_2367LCHO_1049LCHO_2365
HCHE349521 HCH_03428HCH_02726HCH_03426HCH_03428HCH_02707HCH_03426
GVIO251221 GLR3784GLL3174GLR4310GLR3784GLL3174GLR3785
GURA351605 GURA_1669GURA_2337GURA_1670GURA_1669GURA_2337GURA_1670
GFOR411154 GFO_1984GFO_0629GFO_1983GFO_1984GFO_0629GFO_1983
FSUC59374 FSU1216FSU1217FSU1424FSU1216FSU1217FSU1424
FJOH376686 FJOH_0353FJOH_0006FJOH_0360FJOH_0353FJOH_0006FJOH_0360
ESP42895 ENT638_2676ENT638_2675ENT638_2715ENT638_2717ENT638_2716ENT638_2715
ELIT314225 ELI_06860ELI_05130ELI_12195ELI_06860ELI_05130ELI_12195
EFER585054 EFER_2146EFER_2145EFER_2144EFER_2146EFER_2145EFER_2144
ECOO157 WZAWZBZ3224WZAYCCYZ3224
ECOL83334 ECS1139ECS2866ECS1137ECS1139ECS1138ECS1137
ECOL585397 ECED1_2408ECED1_2407ECED1_2406ECED1_2408ECED1_2407ECED1_2406
ECOL585057 ECIAI39_0953ECIAI39_0954ECIAI39_0955ECIAI39_0953ECIAI39_0954ECIAI39_0955
ECOL585056 ECUMN_2398ECUMN_2397ECUMN_2396ECUMN_2398ECUMN_2397ECUMN_2396
ECOL585055 EC55989_2318EC55989_2317EC55989_2316EC55989_2318EC55989_1090EC55989_2316
ECOL585035 ECS88_2159ECS88_2158ECS88_2157ECS88_2159ECS88_2158ECS88_2157
ECOL585034 ECIAI1_2138ECIAI1_2137ECIAI1_2136ECIAI1_2138ECIAI1_1023ECIAI1_2136
ECOL481805 ECOLC_2613ECOLC_1580ECOLC_2615ECOLC_2613ECOLC_2614ECOLC_2615
ECOL469008 ECBD_1593ECBD_1594ECBD_1595ECBD_1593ECBD_2612ECBD_1595
ECOL439855 ECSMS35_1000ECSMS35_1001ECSMS35_1002ECSMS35_1000ECSMS35_1001ECSMS35_1002
ECOL413997 ECB_01968ECB_01967ECB_01966ECB_01968ECB_00985ECB_01966
ECOL409438 ECSE_2336ECSE_2335ECSE_2334ECSE_2336ECSE_1044ECSE_2334
ECOL405955 APECO1_1152APECO1_1151APECO1_1150APECO1_1152APECO1_1151APECO1_1150
ECOL364106 UTI89_C2336UTI89_C2335UTI89_C2334UTI89_C2336UTI89_C2335UTI89_C2334
ECOL362663 ECP_2102ECP_2101ECP_2100ECP_2102ECP_2101ECP_2100
ECOL331111 ECE24377A_1099ECE24377A_2354ECE24377A_1097ECE24377A_1099ECE24377A_1098ECE24377A_1097
ECOL316407 ECK2056:JW2047:B2062ECK2055:JW2046:B2061ECK2054:JW2045:B2060ECK2056:JW2047:B2062ECK0973:JW5132:B0982ECK2054:JW2045:B2060
ECOL199310 C2589C2587C2586C2589C2587C2586
ECAR218491 ECA1417ECA1418ECA1419ECA1417ECA1418ECA1419
CSP501479 CSE45_0334CSE45_0610CSE45_5507CSE45_5506CSE45_0610CSE45_5507
CSAL290398 CSAL_1712CSAL_1703CSAL_1713CSAL_1712CSAL_1703CSAL_1713
CPSY167879 CPS_0578CPS_0579CPS_0580CPS_0578CPS_0579CPS_0580
CJAP155077 CJA_0624CJA_1783CJA_0622CJA_3424CJA_1783
CHUT269798 CHU_2882CHU_2721CHU_0880CHU_2882CHU_2721CHU_0880
BXEN266265 BXE_B2257BXE_B2256BXE_B1726BXE_B1728BXE_B2256BXE_B1726
BVIE269482 BCEP1808_4204BCEP1808_6525BCEP1808_6524BCEP1808_4204BCEP1808_6525BCEP1808_6524
BTHE226186 BT_1356BT_2750BT_0482BT_1654BT_0482
BTHA271848 BTH_II0546BTH_II0545BTH_I1354BTH_II0546BTH_II0545BTH_II0547
BSP36773 BCEP18194_B1817BCEP18194_B2865BCEP18194_C7398BCEP18194_B2273BCEP18194_C7399BCEP18194_B2272
BPSE320373 BURPS668_A2620BURPS668_A2621BURPS668_3220BURPS668_A2620BURPS668_A2621BURPS668_3220
BPSE320372 BURPS1710B_B1074BURPS1710B_B1075BURPS1710B_A3542BURPS1710B_B1074BURPS1710B_B1075BURPS1710B_B1073
BPSE272560 BPSS1831BPSS1832BPSL2778BPSS1831BPSS1832BPSL2778
BMAL320389 BMA10247_2515BMA10247_1491BMA10247_A0101BMA10247_2515BMA10247_1491BMA10247_A0101
BMAL320388 BMASAVP1_A2893BMASAVP1_A2219BMASAVP1_1245BMASAVP1_A2893BMASAVP1_A2219BMASAVP1_1245
BMAL243160 BMA_0047BMA_1710BMA_A0085BMA_0047BMA_1710BMA_A0085
BFRA295405 BF1932BF4208BF2769BF1222BF2769
BFRA272559 BF2000BF4032BF2784BF1187BF2784
BCEN331272 BCEN2424_3823BCEN2424_3822BCEN2424_3824BCEN2424_3823BCEN2424_3822BCEN2424_3824
BCEN331271 BCEN_4540BCEN_4541BCEN_4539BCEN_4540BCEN_4541BCEN_4539
BAMB398577 BAMMC406_3726BAMMC406_5906BAMMC406_3694BAMMC406_3726BAMMC406_5906BAMMC406_5907
BAMB339670 BAMB_5549BAMB_5117BAMB_6175BAMB_5549BAMB_5117BAMB_5550
AVAR240292 AVA_3287AVA_2323AVA_1045AVA_3287AVA_2323AVA_1045
ASP76114 EBA4247EBA5440EBA6797EBA4247EBA5440EBA6797
ASP62977 ACIAD0070ACIAD0069ACIAD0068ACIAD0070ACIAD0069ACIAD0068
ASP62928 AZO3283AZO1612AZO2240AZO2242AZO1612AZO2240
AMAR329726 AM1_A0080AM1_3100AM1_0407AM1_2021AM1_3100AM1_0407
AHYD196024 AHA_2879AHA_2878AHA_2877AHA_2879AHA_2878AHA_2877
AEHR187272 MLG_0799MLG_0798MLG_0800MLG_0799MLG_0798MLG_0800
ADEH290397 ADEH_4275ADEH_4276ADEH_4274ADEH_4275ADEH_4276ADEH_4274
ABOR393595 ABO_0905ABO_0906ABO_0907ABO_0905ABO_0906ABO_0907
ABAU360910 BAV2639BAV1506BAV2650BAV2639BAV1506BAV2650


Organism features enriched in list (features available for 114 out of the 122 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0004351792
Disease:Dysentery 0.000050266
Disease:Gastroenteritis 0.0008075813
Disease:Glanders_and_pneumonia 0.007318733
Disease:Melioidosis 0.007318733
Disease:Plant_rot 0.007318733
Disease:diarrhea 0.007318733
Endospores:No 0.007058231211
Endospores:Yes 0.0000767153
GC_Content_Range4:0-40 1.081e-176213
GC_Content_Range4:40-60 1.345e-666224
GC_Content_Range4:60-100 0.001111941145
GC_Content_Range7:30-40 8.422e-126166
GC_Content_Range7:50-60 6.761e-842107
GC_Content_Range7:60-70 0.000391940134
Genome_Size_Range5:2-4 4.005e-619197
Genome_Size_Range5:4-6 2.619e-1268184
Genome_Size_Range5:6-10 1.437e-92747
Genome_Size_Range9:2-3 4.902e-76120
Genome_Size_Range9:4-5 9.970e-73796
Genome_Size_Range9:5-6 0.00007903188
Genome_Size_Range9:6-8 9.335e-102438
Gram_Stain:Gram_Neg 2.570e-1398333
Gram_Stain:Gram_Pos 1.077e-151150
Motility:No 0.000053414151
Motility:Yes 3.203e-980267
Optimal_temp.:20-30 0.003677757
Oxygen_Req:Anaerobic 0.00001936102
Oxygen_Req:Facultative 0.000010659201
Shape:Coccus 8.227e-6382
Shape:Rod 1.859e-893347
Shape:Spiral 0.0042646134



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 218
Effective number of orgs (counting one per cluster within 468 clusters): 168

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317580
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329530
YPES386656 ncbi Yersinia pestis Pestoides F0
YPES377628 ncbi Yersinia pestis Nepal5160
YPES360102 ncbi Yersinia pestis Antiqua0
YPES349746 ncbi Yersinia pestis Angola0
YPES214092 ncbi Yersinia pestis CO920
YPES187410 ncbi Yersinia pestis KIM 100
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80810
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
SSOL273057 ncbi Sulfolobus solfataricus P20
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE171101 ncbi Streptococcus pneumoniae R61
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SARE391037 ncbi Salinispora arenicola CNS-2050
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPAL316058 ncbi Rhodopseudomonas palustris HaA21
RPAL316056 ncbi Rhodopseudomonas palustris BisB180
RPAL316055 ncbi Rhodopseudomonas palustris BisA531
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR146891 ncbi Prochlorococcus marinus AS96011
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2551
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NGON242231 ncbi Neisseria gonorrhoeae FA 10901
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-21
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LPNE400673 ncbi Legionella pneumophila Corby0
LPNE297246 ncbi Legionella pneumophila Paris0
LPNE297245 ncbi Legionella pneumophila Lens0
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 10
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-000
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSOM228400 ncbi Haemophilus somnus 23360
HSOM205914 ncbi Haemophilus somnus 129PT0
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HINF71421 ncbi Haemophilus influenzae Rd KW200
HINF374930 ncbi Haemophilus influenzae PittEE0
HINF281310 ncbi Haemophilus influenzae 86-028NP0
HDUC233412 ncbi Haemophilus ducreyi 35000HP0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-001
FTUL418136 ncbi Francisella tularensis tularensis WY96-34181
FTUL401614 ncbi Francisella novicida U1121
FTUL393115 ncbi Francisella tularensis tularensis FSC1981
FTUL393011 ncbi Francisella tularensis holarctica OSU181
FTUL351581 Francisella tularensis holarctica FSC2001
FRANT ncbi Francisella tularensis tularensis SCHU S41
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250171
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTET212717 ncbi Clostridium tetani E880
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4110
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1110
CBUR360115 ncbi Coxiella burnetii RSA 3310
CBUR227377 ncbi Coxiella burnetii RSA 4930
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)0
BQUI283165 ncbi Bartonella quintana Toulouse0
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BCIC186490 Candidatus Baumannia cicadellinicola0
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)0
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4490
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AAEO224324 ncbi Aquifex aeolicus VF50


Names of the homologs of the genes in the group in each of these orgs
  G7107   G7106   G7105   G6504   G6503   EG11826   
YPSE349747
YPSE273123
YPES386656
YPES377628
YPES360102
YPES349746
YPES214092
YPES187410
YENT393305
WPIP955
WPIP80849
VEIS391735
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TROS309801
TPEN368408
TPAL243276
TKOD69014
TDEN326298
TDEN243275
TACI273075
SWOL335541
STRO369723
STOK273063
SSOL273057
SPYO370554 MGAS10750_SPY0038
SPYO370553 MGAS2096_SPY0038
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE171101 SPR1839
SMUT210007
SMAR399550
SARE391037
SACI330779
RTYP257363
RSAL288705
RRIC452659
RRIC392021
RPRO272947
RPAL316058 RPB_4708
RPAL316056
RPAL316055 RPE_1088
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PTOR263820
PSP312153
PMAR93060 P9215_18641
PMAR59920 PMN2A_1166
PMAR167555 NATL1_20411
PMAR167546 P9301ORF_1819
PMAR146891 A9601_18001
PISL384616
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PABY272844
OTSU357244
NWIN323098 NWI_1414
NSP387092
NSEN222891
NPHA348780
NGON242231 NGO0541
MTHE349307
MTHE187420
MSYN262723
MSTA339860
MSME246196 MSMEG_4309
MSED399549
MPUL272635
MPNE272634
MPEN272633 MYPE8980
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBAR269797
MAVI243243
MART243272
MAEO419665
MACE188937
MABS561007 MAB_1900C
LPNE400673
LPNE297246
LPNE297245
LPNE272624
LLAC272623
LLAC272622
LINT363253
LCAS321967
LBRE387344
IHOS453591
HWAL362976
HSP64091
HSOM228400
HSOM205914
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HINF71421
HINF374930
HINF281310
HDUC233412
HBUT415426
HACI382638
FTUL458234 FTA_0956
FTUL418136 FTW_1094
FTUL401614 FTN_1046
FTUL393115 FTF0635
FTUL393011 FTH_0888
FTUL351581 FTL_0905
FRANT WZB
FPHI484022 FPHI_1544
FNUC190304
ERUM302409
ERUM254945
ECHA205920
ECAN269484
DSP255470
DSP216389
DNOD246195
DETH243164
CVES412965
CTRA471473
CTRA471472
CTET212717
CTEP194439
CSUL444179
CRUT413404
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992
CMUR243161
CMET456442
CMAQ397948
CKOR374847
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099 CJE_1618
CJEJ192222
CJEI306537
CHOM360107
CFET360106
CFEL264202
CDIP257309
CCUR360105
CCON360104
CCAV227941
CBUR434922
CBUR360115
CBUR227377
CBOT508765
CBLO291272
CBLO203907
CABO218497
BTUR314724
BTRI382640
BSP107806
BQUI283165
BHER314723
BHEN283166
BGAR290434
BCIC186490
BBUR224326
BBAC360095
BAPH372461
BAPH198804
BAFZ390236
AYEL322098
AURANTIMONAS
ASAL382245
APHA212042
APER272557
AMAR234826
ALAI441768 ACL_1019
AFUL224325
AAEO224324


Organism features enriched in list (features available for 210 out of the 218 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.0044079117
Arrangment:Pairs 1.365e-816112
Arrangment:Singles 0.0037656117286
Disease:Bubonic_plague 0.002085566
Disease:Pharyngitis 0.000259988
Disease:Tularemia 0.005880255
Disease:Wide_range_of_infections 0.00001121111
Disease:bronchitis_and_pneumonitis 0.000259988
Endospores:No 0.000015899211
Endospores:Yes 6.343e-7453
GC_Content_Range4:0-40 2.607e-17124213
GC_Content_Range4:40-60 0.003680767224
GC_Content_Range4:60-100 2.062e-1219145
GC_Content_Range7:0-30 1.143e-73447
GC_Content_Range7:30-40 6.609e-990166
GC_Content_Range7:50-60 3.172e-717107
GC_Content_Range7:60-70 2.015e-1019134
Genome_Size_Range5:0-2 2.082e-56136155
Genome_Size_Range5:2-4 0.000041950197
Genome_Size_Range5:4-6 2.630e-1723184
Genome_Size_Range5:6-10 7.530e-9147
Genome_Size_Range9:0-1 3.419e-132727
Genome_Size_Range9:1-2 3.964e-39109128
Genome_Size_Range9:3-4 0.00001601277
Genome_Size_Range9:4-5 7.681e-81396
Genome_Size_Range9:5-6 1.719e-81088
Genome_Size_Range9:6-8 4.932e-7138
Gram_Stain:Gram_Pos 0.000010033150
Habitat:Host-associated 2.946e-7102206
Habitat:Multiple 1.910e-640178
Habitat:Terrestrial 0.0001050231
Motility:Yes 4.081e-768267
Oxygen_Req:Aerobic 0.004685854185
Oxygen_Req:Anaerobic 0.003664348102
Pathogenic_in:Human 0.001055593213
Pathogenic_in:No 0.009184870226
Pathogenic_in:Rodent 0.000737377
Shape:Irregular_coccus 1.882e-81717
Shape:Rod 1.466e-1285347
Shape:Sphere 0.00001511619
Shape:Spiral 0.00104422134
Temp._range:Hyperthermophilic 0.00002681823



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 1
Effective number of orgs (counting one per cluster within 468 clusters): 1

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S85 0.00566247306


Names of the homologs of the genes in the group in each of these orgs
  G7107   G7106   G7105   G6504   G6503   EG11826   
FSUC59374 FSU1216FSU1217FSU1424FSU1216FSU1217FSU1424


Organism features enriched in list (features available for 1 out of the 1 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Shape:Pleomorphic_rod 0.003430512



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GALACTITOLCAT-PWY (galactitol degradation)73550.5119
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)195900.4520
AST-PWY (arginine degradation II (AST pathway))120670.4462
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)149760.4440
PWY0-1182 (trehalose degradation II (trehalase))70480.4392
GLUCARDEG-PWY (D-glucarate degradation I)152760.4354
GLYCOCAT-PWY (glycogen degradation I)246990.4206
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)176800.4091
GALACTCAT-PWY (D-galactonate degradation)104580.4082
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)218900.4012



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7106   G7105   G6504   G6503   EG11826   
G71070.9992850.9996040.9999560.9991810.99962
G71060.9992980.9992910.9999810.999338
G71050.9996050.9992490.999973
G65040.9992170.999643
G65030.999286
EG11826



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PAIRWISE BLAST SCORES:

  G7107   G7106   G7105   G6504   G6503   EG11826   
G71070.0f0--0--
G7106-0.0f0--7.4e-39-
G7105--0.0f0--0
G65040--0.0f0--
G6503-2.9e-35--0.0f0-
EG11826--0--0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX0-7529 (capsular polysaccharide export apparatus) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.333, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9996 0.9992 G7105 (wzc) G7105-MONOMER (tyrosine kinase involved in colanic acid biosynthesis)
   *in cand* 0.9996 0.9992 G7107 (wza) G7107-MONOMER (lipoprotein required for capsular polysaccharide translocation through the outer membrane)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9993 EG11826 (etk) EG11826-MONOMER (autophosphorylating protein tyrosine kinase)
   *in cand* 0.9995 0.9992 G6503 (etp) G6503-MONOMER (phosphotyrosine-protein phosphatase)
   *in cand* 0.9996 0.9992 G6504 (gfcE) G6504-MONOMER (predicted exopolysaccharide export protein)
   *in cand* 0.9995 0.9993 G7106 (wzb) G7106-MONOMER (tyrosine phosphatase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

G7105 G7106 G7107 (centered at G7106)
EG11826 G6503 G6504 (centered at G6503)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7107   G7106   G7105   G6504   G6503   EG11826   
237/623311/623265/623239/623309/623267/623
AAUR290340:2:Tyes-650-650
AAVE397945:0:Tyes-0--0-
ABAC204669:0:Tyes0-12492-1
ABAU360910:0:Tyes112601137112601137
ABOR393595:0:Tyes012012
ABUT367737:0:Tyes-0--0-
ACAU438753:0:Tyes0--0--
ACEL351607:0:Tyes-0--0-
ACRY349163:8:Tyes1455-01455-0
ADEH290397:0:Tyes120120
AEHR187272:0:Tyes102102
AFER243159:0:Tyes1-01-0
AHYD196024:0:Tyes210210
ALAI441768:0:Tyes-----0
AMAR329726:8:Tyes0-----
AMAR329726:9:Tyes-26630159226630
AMET293826:0:Tyes-0--0-
ANAE240017:0:Tyes--0-10600
AORE350688:0:Tyes-0--0-
APLE416269:0:Tyes0--0--
APLE434271:0:Tno0--0--
ASP1667:3:Tyes-300-3024
ASP232721:2:Tyes--0--0
ASP62928:0:Tyes169106396410639
ASP62977:0:Tyes210210
ASP76114:2:Tyes0709150707091507
AVAR240292:3:Tyes224912810224912810
BABO262698:1:Tno0--0--
BAMB339670:1:Tno--0---
BAMB339670:2:Tno4300-4300431
BAMB398577:1:Tno-0--01
BAMB398577:2:Tno32-032--
BAMY326423:0:Tyes-02354-25962534
BANT260799:0:Tno-4804--0-
BANT261594:2:Tno-4761--0-
BANT568206:2:Tyes-5004--0-
BANT592021:2:Tno-4995--0-
BBAC264462:0:Tyes-0--0-
BBRO257310:0:Tyes6450-6450-
BCAN483179:1:Tno6870-6870-
BCEN331271:1:Tno120120
BCEN331272:2:Tyes102102
BCER226900:1:Tyes-410-410
BCER288681:0:Tno-0--0-
BCER315749:1:Tyes-0--3278-
BCER405917:1:Tyes-450-450
BCER572264:1:Tno-48504804-04804
BCLA66692:0:Tyes-520-520
BFRA272559:1:Tyes783282015730-1573
BFRA295405:0:Tno715304615760-1576
BHAL272558:0:Tyes-1010-1010
BJAP224911:0:Fyes17-017-0
BLIC279010:0:Tyes-02779-02779
BLON206672:0:Tyes-0979-0979
BMAL243160:0:Tno--0--0
BMAL243160:1:Tno01489-01489-
BMAL320388:0:Tno--0--0
BMAL320388:1:Tno6590-6590-
BMAL320389:0:Tyes--0--0
BMAL320389:1:Tyes10010-10010-
BMEL224914:1:Tno0696-0696-
BMEL359391:1:Tno0--0--
BOVI236:1:Tyes6210-6210-
BPAR257311:0:Tno8800-8800-
BPER257313:0:Tyes0146-0146-
BPET94624:0:Tyes0486-0486-
BPSE272560:0:Tyes01-01-
BPSE272560:1:Tyes--0--0
BPSE320372:0:Tno12-120
BPSE320372:1:Tno--0---
BPSE320373:0:Tno01-01-
BPSE320373:1:Tno--0--0
BPUM315750:0:Tyes-02364-02364
BSP36773:0:Tyes--0-1-
BSP36773:1:Tyes01048-455-454
BSP376:0:Tyes27-027-2127
BSUB:0:Tyes-30602991-02991
BSUI204722:1:Tyes6730-6730-
BSUI470137:1:Tno7070-7070-
BTHA271848:0:Tno10-102
BTHA271848:1:Tno--0---
BTHE226186:0:Tyes899232501202-0
BTHU281309:1:Tno-430-430
BTHU412694:1:Tno-360-360
BVIE269482:5:Tyes-10-10
BVIE269482:6:Tyes0--0--
BWEI315730:4:Tyes-440-440
BXEN266265:1:Tyes015135111513
CACE272562:1:Tyes--0--0
CAULO:0:Tyes5-05-0
CBEI290402:0:Tyes--0--0
CBOT36826:1:Tno--0--0
CBOT441770:0:Tyes--0--0
CBOT441771:0:Tno--0--0
CBOT441772:1:Tno--0--0
CBOT498213:1:Tno--0--0
CBOT515621:2:Tyes--0--0
CBOT536232:0:Tno--0--0
CCHL340177:0:Tyes0-10-1
CDES477974:0:Tyes-4830-4830
CDIF272563:1:Tyes-0--0-
CEFF196164:0:Fyes-10-10
CGLU196627:0:Tyes-10-10
CHUT269798:0:Tyes197018120197018120
CHYD246194:0:Tyes-0--0-
CJAP155077:0:Tyes21118027391118-
CJEJ195099:0:Tno---0--
CMIC31964:2:Tyes-6550-6550
CMIC443906:2:Tyes-2282105-22820
CNOV386415:0:Tyes--0--0
CPER195102:1:Tyes--0--0
CPER195103:0:Tno--0--0
CPER289380:3:Tyes--0--0
CPHY357809:0:Tyes-25080-25080
CPRO264201:0:Fyes0917-0917-
CPSY167879:0:Tyes012012
CSAL290398:0:Tyes90109010
CSP501479:1:Fyes--10-1
CSP501479:8:Fyes0273--273-
CSP78:2:Tyes0-27680-2768
CVIO243365:0:Tyes0--02425-
DARO159087:0:Tyes3880-3880-
DDES207559:0:Tyes0-20-2
DGEO319795:1:Tyes--0--0
DHAF138119:0:Tyes-0--0-
DOLE96561:0:Tyes1-01-0
DPSY177439:1:Fyes2-02-0
DRAD243230:2:Tyes--0--0
DRED349161:0:Tyes-1630-1630
DSHI398580:5:Tyes0361-0361-
DVUL882:0:Tyes0-20-2
ECAR218491:0:Tyes012012
ECOL199310:0:Tno310310
ECOL316407:0:Tno109310921091109301091
ECOL331111:6:Tno212160210
ECOL362663:0:Tno210210
ECOL364106:1:Tno210210
ECOL405955:2:Tyes210210
ECOL409438:6:Tyes130613051304130601304
ECOL413997:0:Tno9729719709720970
ECOL439855:4:Tno012012
ECOL469008:0:Tno01209952
ECOL481805:0:Tno102401026102410251026
ECOL585034:0:Tno109610951094109601094
ECOL585035:0:Tno210210
ECOL585055:0:Tno121312121211121301211
ECOL585056:2:Tno210210
ECOL585057:0:Tno012012
ECOL585397:0:Tno210210
ECOL83334:0:Tno217620210
ECOLI:0:Tno111711161115210
ECOO157:0:Tno168716861685168701685
EFAE226185:3:Tyes-0--0-
EFER585054:1:Tyes210210
ELIT314225:0:Tyes3530143135301431
ESP42895:1:Tyes1039414039
FALN326424:0:Tyes--3547-03547
FJOH376686:0:Tyes35803653580365
FMAG334413:1:Tyes--0--0
FNOD381764:0:Tyes0--0--
FPHI484022:1:Tyes-0----
FRANT:0:Tno-0----
FSP106370:0:Tyes--0--0
FSP1855:0:Tyes-49380-49380
FSUC59374:0:Tyes0120601206
FTUL351581:0:Tno-0----
FTUL393011:0:Tno-0----
FTUL393115:0:Tyes-0----
FTUL401614:0:Tyes-0----
FTUL418136:0:Tno-0----
FTUL458234:0:Tno-0----
GBET391165:0:Tyes-0--0-
GFOR411154:0:Tyes135501354135501354
GKAU235909:1:Tyes-02970-30172970
GMET269799:1:Tyes2-02-0
GOXY290633:5:Tyes0--0--
GSUL243231:0:Tyes2-02-0
GTHE420246:1:Tyes-02834-28842834
GURA351605:0:Tyes0667106671
GVIO251221:0:Tyes621011486210622
HARS204773:0:Tyes0-20-2
HAUR316274:2:Tyes--3837-44260
HCHE349521:0:Tyes684186826840682
HHAL349124:0:Tyes2870-2870-
HHEP235279:0:Tyes-0--0-
HMOD498761:0:Tyes-0--0-
HNEP81032:0:Tyes1432-01432-0
ILOI283942:0:Tyes0--0--
JSP290400:1:Tyes0--0--
JSP375286:0:Tyes0-20-2
KPNE272620:2:Tyes1-01-0
KRAD266940:2:Fyes-8290-8290
LACI272621:0:Tyes--0--0
LBIF355278:1:Tyes-0--0-
LBIF456481:1:Tno-0--0-
LBOR355276:0:Tyes-0--0-
LBOR355277:0:Tno-0--0-
LCHO395495:0:Tyes247901331133301331
LDEL321956:0:Tyes--1029-01029
LDEL390333:0:Tyes--979-0979
LGAS324831:0:Tyes--0--0
LHEL405566:0:Tyes--0--0
LINN272626:1:Tno-0--0-
LINT189518:0:Tyes-0--0-
LINT267671:0:Tno-0--0-
LJOH257314:0:Tyes--0--0
LMES203120:1:Tyes--0--0
LMON169963:0:Tno-0--0-
LMON265669:0:Tyes-0--0-
LPLA220668:0:Tyes--779--0
LREU557436:0:Tyes-0--0-
LSAK314315:0:Tyes--0--0
LSPH444177:1:Tyes--0--0
LWEL386043:0:Tyes-0--0-
LXYL281090:0:Tyes--0--0
MABS561007:1:Tyes-0----
MAER449447:0:Tyes414203284414203284
MAQU351348:2:Tyes077-077-
MBOV233413:0:Tno-0--0-
MBOV410289:0:Tno-0--0-
MCAP243233:0:Tyes0-9610-961
MEXT419610:0:Tyes01014-01014-
MFLA265072:0:Tyes2-02-0
MGIL350054:3:Tyes-014-014
MLOT266835:2:Tyes33070-33070733
MMAG342108:0:Tyes-0581-0581
MMAR394221:0:Tyes01211-01211-
MPEN272633:0:Tyes----0-
MPET420662:1:Tyes199215220199215220
MSME246196:0:Tyes-0----
MSP164756:1:Tno-24100-24100
MSP164757:0:Tno-90-90
MSP189918:2:Tyes-24420-24420
MSP266779:3:Tyes210927050210927050
MSP400668:0:Tyes01369-01369-
MSP409:2:Tyes261--261-0
MSUC221988:0:Tyes1-01-0
MTBCDC:0:Tno-0--0-
MTBRV:0:Tno-0--0-
MTHE264732:0:Tyes-0--0-
MTUB336982:0:Tno-0--0-
MTUB419947:0:Tyes-0--0-
MVAN350058:0:Tyes--0--0
MXAN246197:0:Tyes867-0867-0
NARO279238:0:Tyes0296251302962513
NEUR228410:0:Tyes102102
NEUT335283:2:Tyes119211911193119201193
NFAR247156:2:Tyes-0--0-
NGON242231:0:Tyes----0-
NHAM323097:2:Tyes1--1-0
NMEN122586:0:Tno0--01150-
NMEN122587:0:Tyes0--01185-
NMEN272831:0:Tno0--01020-
NMEN374833:0:Tno0--01080-
NMUL323848:3:Tyes0816208162
NOCE323261:1:Tyes47413320474-0
NSP103690:6:Tyes154822370154822370
NSP35761:1:Tyes--0-3370
NWIN323098:0:Tyes---0--
OANT439375:5:Tyes24590-24590-
OCAR504832:0:Tyes2--2-0
OIHE221109:0:Tyes-880-880
PACN267747:0:Tyes-0--0-
PAER208963:0:Tyes-0--0-
PAER208964:0:Tno0754-0754-
PARC259536:0:Tyes012012
PATL342610:0:Tyes996372956996370
PCAR338963:0:Tyes0-10-1
PCRY335284:1:Tyes012012
PDIS435591:0:Tyes144822650112322652191
PENT384676:0:Tyes12670-12670-
PFLU205922:0:Tyes0111001110
PFLU216595:1:Tyes0161501615
PFLU220664:0:Tyes23990-12850-
PGIN242619:0:Tyes1104801-0
PHAL326442:1:Tyes0127140801271408
PING357804:0:Tyes0--0--
PINT246198:1:Tyes0236-486--
PLUM243265:0:Fyes210210
PLUT319225:0:Tyes591-0591-0
PMAR146891:0:Tyes-0----
PMAR167539:0:Tyes-0--0-
PMAR167540:0:Tyes0377-0--
PMAR167542:0:Tyes-3980-3980
PMAR167546:0:Tyes-0----
PMAR167555:0:Tyes-0----
PMAR59920:0:Tno-0----
PMAR74546:0:Tyes-0--0-
PMAR74547:0:Tyes-0--0-
PMAR93060:0:Tyes-0----
PMEN399739:0:Tyes27060-27060-
PMOB403833:0:Tyes649-0649-0
PMUL272843:1:Tyes012012
PNAP365044:8:Tyes65640656463
PPEN278197:0:Tyes--0--0
PPRO298386:2:Tyes210210
PPUT160488:0:Tno12300-12300-
PPUT351746:0:Tyes1000-1000-
PPUT76869:0:Tno12650-12650-
PRUM264731:0:Tyes-0865-0865
PSP117:0:Tyes05308607-5308607
PSP296591:2:Tyes0-20-2
PSP56811:2:Tyes210210
PSTU379731:0:Tyes7347250734725726
PSYR205918:0:Tyes801801
PSYR223283:2:Tyes801801
PTHE370438:0:Tyes-17440-17440
RALB246199:0:Tyes--0--0
RCAS383372:0:Tyes-640-640
RDEN375451:2:Tyes0-----
RDEN375451:4:Tyes--0--0
RETL347834:5:Tyes0691-0691-
REUT264198:2:Tyes210210
REUT381666:1:Tyes2102114
RFER338969:1:Tyes10310-
RLEG216596:6:Tyes286702867-
RMET266264:1:Tyes210210
RPAL258594:0:Tyes5-05-0
RPAL316055:0:Tyes--0---
RPAL316057:0:Tyes0--0--
RPAL316058:0:Tyes---0--
RPOM246200:1:Tyes7630-7630-
RRUB269796:1:Tyes162121490162121490
RSOL267608:0:Tyes210210
RSP101510:3:Fyes-10-10
RSP357808:0:Tyes-0781-0781
RSPH272943:1:Tyes210210
RSPH349101:1:Tno-3550--0
RSPH349101:2:Tno0--0--
RSPH349102:3:Tyes012012
RXYL266117:0:Tyes-15160-15160
SACI56780:0:Tyes0-19170--
SAGA205921:0:Tno--0--0
SAGA208435:0:Tno--0--0
SAGA211110:0:Tyes--0--0
SALA317655:1:Tyes1133-77811330778
SAUR158878:1:Tno-17900-17900
SAUR158879:1:Tno-16640-16640
SAUR196620:0:Tno-17600-17600
SAUR273036:0:Tno-19050-17200
SAUR282458:0:Tno-18070-18070
SAUR282459:0:Tno-17500-17500
SAUR359786:1:Tno-18410-18410
SAUR359787:1:Tno-18000-18000
SAUR367830:3:Tno-16450-16450
SAUR418127:0:Tyes-17790-17790
SAUR426430:0:Tno-17800-17800
SAUR93061:0:Fno-19210-19210
SAUR93062:1:Tno-17620-17620
SAVE227882:1:Fyes-0--0-
SBAL399599:3:Tyes11890-11890-
SBAL402882:1:Tno10630-10630-
SBOY300268:1:Tyes127301275127312741275
SCO:2:Fyes-0--0-
SDEG203122:0:Tyes01955-01955-
SDEN318161:0:Tyes3880-3880-
SDYS300267:1:Tyes210210
SELO269084:0:Tyes-0--0-
SENT209261:0:Tno012012
SENT220341:0:Tno210210
SENT295319:0:Tno012012
SENT321314:2:Tno210210
SENT454169:2:Tno210210
SEPI176279:1:Tyes-0--0-
SEPI176280:0:Tno-0--0-
SERY405948:0:Tyes-0--0-
SFLE198214:0:Tyes107210711070107201070
SFLE373384:0:Tno210610210
SFUM335543:0:Tyes0-27650-2765
SGLO343509:3:Tyes012012
SGOR29390:0:Tyes--1861-01861
SHAE279808:0:Tyes-5370-6940
SHAL458817:0:Tyes0304-0304-
SHIGELLA:0:Tno101410131012101401012
SLAC55218:1:Fyes3091--30910-
SLOI323850:0:Tyes0210-0210-
SMED366394:3:Tyes0--0--
SMEL266834:1:Tyes-----0
SMEL266834:2:Tyes0--0--
SONE211586:1:Tyes9650-9650-
SPEA398579:0:Tno01177-01177-
SPNE1313:0:Tyes-15910-15910
SPNE170187:0:Tyes--0--0
SPNE171101:0:Tno----0-
SPNE487213:0:Tno--0-14960
SPNE487214:0:Tno--0-16310
SPNE488221:0:Tno--0--0
SPRO399741:1:Tyes132011319011319
SPYO370553:0:Tno-0----
SPYO370554:0:Tyes-0----
SRUB309807:1:Tyes-143-0143-
SSAP342451:2:Tyes-8590-8590
SSED425104:0:Tyes0--0--
SSON300269:1:Tyes106810671066106801066
SSP1131:0:Tyes-0--0-
SSP1148:0:Tyes0--01432-
SSP292414:2:Tyes14840-14840-
SSP321327:0:Tyes-0--0-
SSP321332:0:Tyes-0--0-
SSP387093:0:Tyes179-0179-0
SSP644076:7:Fyes0--0--
SSP64471:0:Tyes-3240-3240
SSP84588:0:Tyes01651-161651-
SSP94122:1:Tyes01066-01066-
SSUI391295:0:Tyes-11310-11310
SSUI391296:0:Tyes--0-11380
STHE264199:0:Tyes--0--0
STHE292459:0:Tyes-0--0-
STHE299768:0:Tno--0--0
STHE322159:2:Tyes--0-7590
STYP99287:1:Tyes210210
TCRU317025:0:Tyes-0--0-
TDEN292415:0:Tyes23902372390237
TELO197221:0:Tyes-43-1430
TERY203124:0:Tyes018651018651
TFUS269800:0:Tyes-0--0-
TLET416591:0:Tyes88-088-0
TMAR243274:0:Tyes0--0--
TPET390874:0:Tno5-05-0
TPSE340099:0:Tyes-5300-5300
TSP1755:0:Tyes-02085-02085
TSP28240:0:Tyes4--4-0
TTEN273068:0:Tyes--559-0559
TTHE262724:1:Tyes-0--0-
TTHE300852:2:Tyes-0--0-
TTUR377629:0:Tyes17000-17000-
VCHO:0:Tyes0103101031
VCHO345073:1:Tno09810981
VFIS312309:2:Tyes023023
VPAR223926:0:Tyes012012
VVUL196600:2:Tyes023023
VVUL216895:1:Tno520520
WSUC273121:0:Tyes-0--0-
XAUT78245:1:Tyes270-0270--
XAXO190486:0:Tyes4950-4950-
XCAM190485:0:Tyes3370-3370-
XCAM314565:0:Tno0345-0345-
XCAM316273:0:Tno3780-3780-
XCAM487884:0:Tno0358--358-
XFAS160492:2:Tno730-730-
XFAS183190:1:Tyes580-580-
XFAS405440:0:Tno1930-1930-
XORY291331:0:Tno8990-8990-
XORY342109:0:Tyes8610-8610-
XORY360094:0:Tno21920-21920-
ZMOB264203:0:Tyes7860-7860-



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