Org ID | Org Name | # genes in group found in org |
XAUT78245 ncbi | Xanthobacter autotrophicus Py2 | 6 |
VEIS391735 ncbi | Verminephrobacter eiseniae EF01-2 | 6 |
STYP99287 ncbi | Salmonella enterica enterica serovar Typhimurium str. LT2 | 6 |
SSP644076 | Silicibacter sp. TrichCH4B | 5 |
SSP292414 ncbi | Ruegeria sp. TM1040 | 6 |
SSON300269 ncbi | Shigella sonnei Ss046 | 6 |
SPRO399741 ncbi | Serratia proteamaculans 568 | 5 |
SMEL266834 ncbi | Sinorhizobium meliloti 1021 | 6 |
SMED366394 ncbi | Sinorhizobium medicae WSM419 | 6 |
SLAC55218 | Ruegeria lacuscaerulensis | 5 |
SHIGELLA ncbi | Shigella flexneri 2a str. 2457T | 6 |
SERY405948 ncbi | Saccharopolyspora erythraea NRRL 2338 | 6 |
SENT454169 ncbi | Salmonella enterica enterica serovar Heidelberg str. SL476 | 6 |
SENT321314 ncbi | Salmonella enterica enterica serovar Choleraesuis str. SC-B67 | 6 |
SENT295319 ncbi | Salmonella enterica enterica serovar Paratyphi A str. ATCC 9150 | 6 |
SENT220341 ncbi | Salmonella enterica enterica serovar Typhi str. CT18 | 6 |
SENT209261 ncbi | Salmonella enterica enterica serovar Typhi str. Ty2 | 6 |
SCO ncbi | Streptomyces coelicolor A3(2) | 6 |
SBOY300268 ncbi | Shigella boydii Sb227 | 6 |
SAVE227882 ncbi | Streptomyces avermitilis MA-4680 | 6 |
RXYL266117 ncbi | Rubrobacter xylanophilus DSM 9941 | 6 |
RSP101510 ncbi | Rhodococcus jostii RHA1 | 6 |
RSOL267608 ncbi | Ralstonia solanacearum GMI1000 | 6 |
RPOM246200 ncbi | Ruegeria pomeroyi DSS-3 | 6 |
RMET266264 ncbi | Ralstonia metallidurans CH34 | 6 |
RLEG216596 ncbi | Rhizobium leguminosarum bv. viciae 3841 | 6 |
RFER338969 ncbi | Rhodoferax ferrireducens T118 | 5 |
REUT381666 ncbi | Ralstonia eutropha H16 | 6 |
REUT264198 ncbi | Ralstonia eutropha JMP134 | 6 |
RETL347834 ncbi | Rhizobium etli CFN 42 | 6 |
RDEN375451 ncbi | Roseobacter denitrificans OCh 114 | 6 |
PSYR223283 ncbi | Pseudomonas syringae pv. tomato str. DC3000 | 6 |
PSYR205918 ncbi | Pseudomonas syringae pv. syringae B728a | 5 |
PSTU379731 ncbi | Pseudomonas stutzeri A1501 | 6 |
PSP312153 ncbi | Polynucleobacter necessarius asymbioticus QLW-P1DMWA-1 | 6 |
PSP296591 ncbi | Polaromonas sp. JS666 | 6 |
PSP117 | Pirellula sp. | 5 |
PPUT76869 ncbi | Pseudomonas putida GB-1 | 6 |
PPUT351746 ncbi | Pseudomonas putida F1 | 6 |
PPUT160488 ncbi | Pseudomonas putida KT2440 | 6 |
PPRO298386 ncbi | Photobacterium profundum SS9 | 5 |
PNAP365044 ncbi | Polaromonas naphthalenivorans CJ2 | 6 |
PMEN399739 ncbi | Pseudomonas mendocina ymp | 6 |
PFLU220664 ncbi | Pseudomonas fluorescens Pf-5 | 6 |
PFLU216595 ncbi | Pseudomonas fluorescens SBW25 | 6 |
PFLU205922 ncbi | Pseudomonas fluorescens Pf0-1 | 6 |
PENT384676 ncbi | Pseudomonas entomophila L48 | 6 |
PATL342610 ncbi | Pseudoalteromonas atlantica T6c | 5 |
PAER208964 ncbi | Pseudomonas aeruginosa PAO1 | 6 |
PAER208963 ncbi | Pseudomonas aeruginosa UCBPP-PA14 | 6 |
OCAR504832 ncbi | Oligotropha carboxidovorans OM5 | 6 |
OANT439375 ncbi | Ochrobactrum anthropi ATCC 49188 | 6 |
MSUC221988 ncbi | Mannheimia succiniciproducens MBEL55E | 6 |
MSP409 | Methylobacterium sp. | 6 |
MSP400668 ncbi | Marinomonas sp. MWYL1 | 5 |
MSP266779 ncbi | Chelativorans sp. BNC1 | 6 |
MSME246196 ncbi | Mycobacterium smegmatis MC2 155 | 6 |
MPET420662 ncbi | Methylibium petroleiphilum PM1 | 6 |
MLOT266835 ncbi | Mesorhizobium loti MAFF303099 | 6 |
MAQU351348 ncbi | Marinobacter aquaeolei VT8 | 6 |
LWEL386043 ncbi | Listeria welshimeri serovar 6b str. SLCC5334 | 5 |
LMON265669 ncbi | Listeria monocytogenes 4b F2365 | 5 |
LMON169963 ncbi | Listeria monocytogenes EGD-e | 5 |
LINN272626 ncbi | Listeria innocua Clip11262 | 5 |
LCHO395495 ncbi | Leptothrix cholodnii SP-6 | 6 |
KRAD266940 ncbi | Kineococcus radiotolerans SRS30216 | 5 |
KPNE272620 ncbi | Klebsiella pneumoniae pneumoniae MGH 78578 | 6 |
JSP375286 ncbi | Janthinobacterium sp. Marseille | 5 |
HCHE349521 ncbi | Hahella chejuensis KCTC 2396 | 6 |
HARS204773 ncbi | Herminiimonas arsenicoxydans | 5 |
GTHE420246 ncbi | Geobacillus thermodenitrificans NG80-2 | 6 |
GKAU235909 ncbi | Geobacillus kaustophilus HTA426 | 6 |
ESP42895 | Enterobacter sp. | 5 |
ECOO157 ncbi | Escherichia coli O157:H7 EDL933 | 6 |
ECOL83334 | Escherichia coli O157:H7 | 6 |
ECOL585397 ncbi | Escherichia coli ED1a | 6 |
ECOL585057 ncbi | Escherichia coli IAI39 | 5 |
ECOL585056 ncbi | Escherichia coli UMN026 | 6 |
ECOL585055 ncbi | Escherichia coli 55989 | 6 |
ECOL585035 ncbi | Escherichia coli S88 | 6 |
ECOL585034 ncbi | Escherichia coli IAI1 | 6 |
ECOL481805 ncbi | Escherichia coli ATCC 8739 | 6 |
ECOL469008 ncbi | Escherichia coli BL21(DE3) | 6 |
ECOL439855 ncbi | Escherichia coli SMS-3-5 | 6 |
ECOL413997 ncbi | Escherichia coli B str. REL606 | 6 |
ECOL409438 ncbi | Escherichia coli SE11 | 6 |
ECOL405955 ncbi | Escherichia coli APEC O1 | 6 |
ECOL364106 ncbi | Escherichia coli UTI89 | 6 |
ECOL362663 ncbi | Escherichia coli 536 | 6 |
ECOL331111 ncbi | Escherichia coli E24377A | 6 |
ECOL316407 ncbi | Escherichia coli K-12 substr. W3110 | 6 |
ECOL199310 ncbi | Escherichia coli CFT073 | 6 |
ECAR218491 ncbi | Pectobacterium atrosepticum SCRI1043 | 6 |
DHAF138119 ncbi | Desulfitobacterium hafniense Y51 | 6 |
DGEO319795 ncbi | Deinococcus geothermalis DSM 11300 | 6 |
DARO159087 ncbi | Dechloromonas aromatica RCB | 6 |
CSAL290398 ncbi | Chromohalobacter salexigens DSM 3043 | 5 |
BXEN266265 ncbi | Burkholderia xenovorans LB400 | 6 |
BVIE269482 ncbi | Burkholderia vietnamiensis G4 | 6 |
BTHA271848 ncbi | Burkholderia thailandensis E264 | 6 |
BSUI470137 ncbi | Brucella suis ATCC 23445 | 5 |
BSUI204722 ncbi | Brucella suis 1330 | 5 |
BSP376 | Bradyrhizobium sp. | 5 |
BSP36773 | Burkholderia sp. | 6 |
BPSE320373 ncbi | Burkholderia pseudomallei 668 | 6 |
BPSE320372 ncbi | Burkholderia pseudomallei 1710b | 6 |
BPSE272560 ncbi | Burkholderia pseudomallei K96243 | 6 |
BPET94624 | Bordetella petrii | 6 |
BPAR257311 ncbi | Bordetella parapertussis 12822 | 5 |
BOVI236 | Brucella ovis | 5 |
BMEL224914 ncbi | Brucella melitensis bv. 1 str. 16M | 5 |
BMAL320389 ncbi | Burkholderia mallei NCTC 10247 | 5 |
BMAL243160 ncbi | Burkholderia mallei ATCC 23344 | 5 |
BJAP224911 ncbi | Bradyrhizobium japonicum USDA 110 | 6 |
BCEN331272 ncbi | Burkholderia cenocepacia HI2424 | 6 |
BCEN331271 ncbi | Burkholderia cenocepacia AU 1054 | 6 |
BCAN483179 ncbi | Brucella canis ATCC 23365 | 5 |
BBRO257310 ncbi | Bordetella bronchiseptica RB50 | 5 |
BAMB398577 ncbi | Burkholderia ambifaria MC40-6 | 6 |
BAMB339670 ncbi | Burkholderia ambifaria AMMD | 6 |
ASP76114 ncbi | Aromatoleum aromaticum EbN1 | 5 |
ASP62977 ncbi | Acinetobacter sp. ADP1 | 5 |
ASP62928 ncbi | Azoarcus sp. BH72 | 5 |
ASP232721 ncbi | Acidovorax sp. JS42 | 6 |
ASP1667 | Arthrobacter sp. | 6 |
AHYD196024 | Aeromonas hydrophila dhakensis | 5 |
ACRY349163 ncbi | Acidiphilium cryptum JF-5 | 6 |
ACAU438753 ncbi | Azorhizobium caulinodans ORS 571 | 6 |
ABOR393595 ncbi | Alcanivorax borkumensis SK2 | 6 |
ABAU360910 ncbi | Bordetella avium 197N | 6 |
AAUR290340 ncbi | Arthrobacter aurescens TC1 | 6 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Disease:Melioidosis | 0.0083339 | 3 | 3 |
Disease:Opportunistic_infections | 0.0003311 | 5 | 5 |
Disease:Plant_rot | 0.0083339 | 3 | 3 |
Endospores:No | 0.0001865 | 27 | 211 |
GC_Content_Range4:0-40 | 2.606e-21 | 4 | 213 |
GC_Content_Range4:60-100 | 1.136e-12 | 61 | 145 |
GC_Content_Range7:30-40 | 1.087e-14 | 4 | 166 |
GC_Content_Range7:40-50 | 6.822e-6 | 8 | 117 |
GC_Content_Range7:50-60 | 1.532e-9 | 46 | 107 |
GC_Content_Range7:60-70 | 2.896e-11 | 56 | 134 |
Genome_Size_Range5:2-4 | 7.922e-6 | 21 | 197 |
Genome_Size_Range5:4-6 | 2.771e-8 | 63 | 184 |
Genome_Size_Range5:6-10 | 5.260e-17 | 35 | 47 |
Genome_Size_Range9:2-3 | 2.521e-8 | 5 | 120 |
Genome_Size_Range9:4-5 | 0.0043435 | 29 | 96 |
Genome_Size_Range9:5-6 | 9.044e-6 | 34 | 88 |
Genome_Size_Range9:6-8 | 2.252e-13 | 28 | 38 |
Genome_Size_Range9:8-10 | 0.0002986 | 7 | 9 |
Gram_Stain:Gram_Neg | 5.688e-8 | 93 | 333 |
Gram_Stain:Gram_Pos | 0.0000616 | 15 | 150 |
Habitat:Multiple | 0.0005058 | 51 | 178 |
Motility:No | 0.0001397 | 16 | 151 |
Motility:Yes | 7.873e-8 | 80 | 267 |
Optimal_temp.:30 | 0.0035338 | 8 | 15 |
Oxygen_Req:Aerobic | 0.0003704 | 53 | 185 |
Oxygen_Req:Anaerobic | 3.297e-8 | 3 | 102 |
Shape:Coccus | 0.0001020 | 5 | 82 |
Shape:Rod | 2.288e-9 | 98 | 347 |
Temp._range:Mesophilic | 0.0082854 | 105 | 473 |
Org ID | Org Name | # genes in group found in org |
ZMOB264203 ncbi | Zymomonas mobilis mobilis ZM4 | 0 |
XFAS405440 ncbi | Xylella fastidiosa M12 | 0 |
XFAS183190 ncbi | Xylella fastidiosa Temecula1 | 0 |
XFAS160492 ncbi | Xylella fastidiosa 9a5c | 0 |
WSUC273121 ncbi | Wolinella succinogenes DSM 1740 | 0 |
WPIP955 | Wolbachia pipientis | 0 |
WPIP80849 | Wolbachia endosymbiont of Brugia malayi | 0 |
UURE95667 | Ureaplasma urealyticum serovar 13 | 0 |
UURE95664 | Ureaplasma urealyticum serovar 10 | 0 |
UPAR505682 ncbi | Ureaplasma parvum serovar 3 str. ATCC 27815 | 0 |
UMET351160 ncbi | uncultured methanogenic archaeon RC-I | 0 |
TWHI218496 ncbi | Tropheryma whipplei TW08/27 | 0 |
TWHI203267 ncbi | Tropheryma whipplei Twist | 0 |
TVOL273116 ncbi | Thermoplasma volcanium GSS1 | 0 |
TTUR377629 ncbi | Teredinibacter turnerae T7901 | 0 |
TTHE300852 ncbi | Thermus thermophilus HB8 | 0 |
TTHE262724 ncbi | Thermus thermophilus HB27 | 0 |
TTEN273068 ncbi | Thermoanaerobacter tengcongensis MB4 | 0 |
TSP28240 | Thermotoga sp. | 0 |
TSP1755 | Thermoanaerobacter sp. | 0 |
TPSE340099 ncbi | Thermoanaerobacter pseudethanolicus ATCC 33223 | 0 |
TPET390874 ncbi | Thermotoga petrophila RKU-1 | 1 |
TPAL243276 ncbi | Treponema pallidum pallidum Nichols | 0 |
TMAR243274 ncbi | Thermotoga maritima MSB8 | 1 |
TLET416591 ncbi | Thermotoga lettingae TMO | 0 |
TKOD69014 ncbi | Thermococcus kodakarensis KOD1 | 0 |
TERY203124 ncbi | Trichodesmium erythraeum IMS101 | 0 |
TELO197221 ncbi | Thermosynechococcus elongatus BP-1 | 0 |
TDEN326298 ncbi | Sulfurimonas denitrificans DSM 1251 | 0 |
TCRU317025 ncbi | Thiomicrospira crunogena XCL-2 | 0 |
TACI273075 ncbi | Thermoplasma acidophilum DSM 1728 | 0 |
SWOL335541 ncbi | Syntrophomonas wolfei wolfei Goettingen | 0 |
STOK273063 ncbi | Sulfolobus tokodaii 7 | 0 |
STHE322159 ncbi | Streptococcus thermophilus LMD-9 | 0 |
STHE299768 ncbi | Streptococcus thermophilus CNRZ1066 | 0 |
STHE264199 ncbi | Streptococcus thermophilus LMG 18311 | 0 |
SSUI391296 ncbi | Streptococcus suis 98HAH33 | 0 |
SSUI391295 ncbi | Streptococcus suis 05ZYH33 | 0 |
SSP387093 ncbi | Sulfurovum sp. NBC37-1 | 0 |
SSP321332 ncbi | Synechococcus sp. JA-2-3Ba(2-13) | 0 |
SSP321327 ncbi | Synechococcus sp. JA-3-3Ab | 0 |
SSAP342451 ncbi | Staphylococcus saprophyticus saprophyticus ATCC 15305 | 0 |
SRUB309807 ncbi | Salinibacter ruber DSM 13855 | 0 |
SPYO370554 ncbi | Streptococcus pyogenes MGAS10750 | 0 |
SPYO370553 ncbi | Streptococcus pyogenes MGAS2096 | 0 |
SPYO370552 ncbi | Streptococcus pyogenes MGAS10270 | 0 |
SPYO370551 ncbi | Streptococcus pyogenes MGAS9429 | 0 |
SPYO319701 ncbi | Streptococcus pyogenes MGAS6180 | 0 |
SPYO293653 ncbi | Streptococcus pyogenes MGAS5005 | 0 |
SPYO286636 ncbi | Streptococcus pyogenes MGAS10394 | 0 |
SPYO198466 ncbi | Streptococcus pyogenes MGAS315 | 0 |
SPYO193567 ncbi | Streptococcus pyogenes SSI-1 | 0 |
SPYO186103 ncbi | Streptococcus pyogenes MGAS8232 | 0 |
SPYO160490 ncbi | Streptococcus pyogenes M1 GAS | 0 |
SPNE488221 ncbi | Streptococcus pneumoniae 70585 | 0 |
SPNE487214 ncbi | Streptococcus pneumoniae Hungary19A-6 | 0 |
SPNE487213 ncbi | Streptococcus pneumoniae Taiwan19F-14 | 0 |
SPNE171101 ncbi | Streptococcus pneumoniae R6 | 0 |
SPNE170187 ncbi | Streptococcus pneumoniae G54 | 0 |
SPNE1313 | Streptococcus pneumoniae | 0 |
SMUT210007 ncbi | Streptococcus mutans UA159 | 0 |
SMAR399550 ncbi | Staphylothermus marinus F1 | 0 |
SHAE279808 ncbi | Staphylococcus haemolyticus JCSC1435 | 0 |
SGOR29390 | Streptococcus gordonii Challis | 0 |
SGLO343509 ncbi | Sodalis glossinidius morsitans | 1 |
SEPI176280 ncbi | Staphylococcus epidermidis ATCC 12228 | 0 |
SEPI176279 ncbi | Staphylococcus epidermidis RP62A | 0 |
SELO269084 ncbi | Synechococcus elongatus PCC 6301 | 0 |
SDEG203122 ncbi | Saccharophagus degradans 2-40 | 0 |
SAUR93062 ncbi | Staphylococcus aureus aureus COL | 0 |
SAUR93061 ncbi | Staphylococcus aureus aureus NCTC 8325 | 0 |
SAUR426430 ncbi | Staphylococcus aureus aureus Newman | 0 |
SAUR418127 ncbi | Staphylococcus aureus aureus Mu3 | 0 |
SAUR367830 | Staphylococcus aureus aureus USA300 | 0 |
SAUR359787 ncbi | Staphylococcus aureus aureus JH1 | 0 |
SAUR359786 ncbi | Staphylococcus aureus aureus JH9 | 0 |
SAUR282459 ncbi | Staphylococcus aureus aureus MSSA476 | 0 |
SAUR282458 ncbi | Staphylococcus aureus aureus MRSA252 | 0 |
SAUR273036 ncbi | Staphylococcus aureus RF122 | 0 |
SAUR196620 ncbi | Staphylococcus aureus aureus MW2 | 0 |
SAUR158879 ncbi | Staphylococcus aureus aureus N315 | 0 |
SAUR158878 ncbi | Staphylococcus aureus aureus Mu50 | 0 |
SARE391037 ncbi | Salinispora arenicola CNS-205 | 0 |
SAGA211110 ncbi | Streptococcus agalactiae NEM316 | 0 |
SAGA208435 ncbi | Streptococcus agalactiae 2603V/R | 0 |
SAGA205921 ncbi | Streptococcus agalactiae A909 | 0 |
SACI56780 ncbi | Syntrophus aciditrophicus SB | 0 |
SACI330779 ncbi | Sulfolobus acidocaldarius DSM 639 | 0 |
RTYP257363 ncbi | Rickettsia typhi Wilmington | 0 |
RSAL288705 ncbi | Renibacterium salmoninarum ATCC 33209 | 0 |
RRIC452659 ncbi | Rickettsia rickettsii Iowa | 0 |
RRIC392021 ncbi | Rickettsia rickettsii Sheila Smith | 0 |
RPRO272947 ncbi | Rickettsia prowazekii Madrid E | 0 |
RMAS416276 ncbi | Rickettsia massiliae MTU5 | 0 |
RFEL315456 ncbi | Rickettsia felis URRWXCal2 | 0 |
RCON272944 ncbi | Rickettsia conorii Malish 7 | 0 |
RCAN293613 ncbi | Rickettsia canadensis McKiel | 0 |
RBEL391896 ncbi | Rickettsia bellii OSU 85-389 | 0 |
RBEL336407 ncbi | Rickettsia bellii RML369-C | 0 |
RALB246199 | Ruminococcus albus 8 | 0 |
RAKA293614 ncbi | Rickettsia akari Hartford | 0 |
PTOR263820 ncbi | Picrophilus torridus DSM 9790 | 0 |
PTHE370438 ncbi | Pelotomaculum thermopropionicum SI | 0 |
PSP56811 | Psychrobacter sp. | 1 |
PRUM264731 ncbi | Prevotella ruminicola 23 | 0 |
PPEN278197 ncbi | Pediococcus pentosaceus ATCC 25745 | 1 |
PMOB403833 ncbi | Petrotoga mobilis SJ95 | 0 |
PMAR93060 ncbi | Prochlorococcus marinus MIT 9215 | 0 |
PMAR74547 ncbi | Prochlorococcus marinus MIT 9313 | 1 |
PMAR74546 ncbi | Prochlorococcus marinus MIT 9312 | 0 |
PMAR59920 ncbi | Prochlorococcus marinus NATL2A | 0 |
PMAR167555 ncbi | Prochlorococcus marinus NATL1A | 0 |
PMAR167546 ncbi | Prochlorococcus marinus MIT 9301 | 0 |
PMAR167542 ncbi | Prochlorococcus marinus MIT 9515 | 0 |
PMAR167540 | Prochlorococcus marinus pastoris MED4ax | 0 |
PMAR167539 ncbi | Prochlorococcus marinus marinus CCMP1375 | 1 |
PMAR146891 ncbi | Prochlorococcus marinus AS9601 | 0 |
PLUT319225 ncbi | Chlorobium luteolum DSM 273 | 0 |
PINT246198 | Prevotella intermedia 17 | 0 |
PHOR70601 ncbi | Pyrococcus horikoshii OT3 | 0 |
PGIN242619 ncbi | Porphyromonas gingivalis W83 | 0 |
PFUR186497 ncbi | Pyrococcus furiosus DSM 3638 | 0 |
PCAR338963 ncbi | Pelobacter carbinolicus DSM 2380 | 0 |
PAST100379 | Onion yellows phytoplasma | 0 |
PACN267747 ncbi | Propionibacterium acnes KPA171202 | 0 |
PABY272844 ncbi | Pyrococcus abyssi GE5 | 0 |
OTSU357244 ncbi | Orientia tsutsugamushi Boryong | 0 |
NWIN323098 ncbi | Nitrobacter winogradskyi Nb-255 | 1 |
NSP387092 ncbi | Nitratiruptor sp. SB155-2 | 0 |
NSP103690 ncbi | Nostoc sp. PCC 7120 | 0 |
NSEN222891 ncbi | Neorickettsia sennetsu Miyayama | 0 |
NPHA348780 ncbi | Natronomonas pharaonis DSM 2160 | 0 |
NMEN374833 ncbi | Neisseria meningitidis 053442 | 0 |
NMEN272831 ncbi | Neisseria meningitidis FAM18 | 0 |
NMEN122587 ncbi | Neisseria meningitidis Z2491 | 0 |
NMEN122586 ncbi | Neisseria meningitidis MC58 | 0 |
NHAM323097 ncbi | Nitrobacter hamburgensis X14 | 1 |
NGON242231 ncbi | Neisseria gonorrhoeae FA 1090 | 0 |
MXAN246197 ncbi | Myxococcus xanthus DK 1622 | 0 |
MTUB419947 ncbi | Mycobacterium tuberculosis H37Ra | 1 |
MTUB336982 ncbi | Mycobacterium tuberculosis F11 | 1 |
MTHE349307 ncbi | Methanosaeta thermophila PT | 0 |
MTHE264732 ncbi | Moorella thermoacetica ATCC 39073 | 0 |
MTHE187420 ncbi | Methanothermobacter thermautotrophicus Delta H | 0 |
MTBRV ncbi | Mycobacterium tuberculosis H37Rv | 1 |
MTBCDC ncbi | Mycobacterium tuberculosis CDC1551 | 1 |
MSYN262723 ncbi | Mycoplasma synoviae 53 | 0 |
MSTA339860 ncbi | Methanosphaera stadtmanae DSM 3091 | 0 |
MSED399549 ncbi | Metallosphaera sedula DSM 5348 | 0 |
MPUL272635 ncbi | Mycoplasma pulmonis UAB CTIP | 0 |
MPNE272634 ncbi | Mycoplasma pneumoniae M129 | 0 |
MPEN272633 ncbi | Mycoplasma penetrans HF-2 | 0 |
MMYC272632 ncbi | Mycoplasma mycoides mycoides SC str. PG1 | 0 |
MMOB267748 ncbi | Mycoplasma mobile 163K | 0 |
MMAZ192952 ncbi | Methanosarcina mazei Go1 | 0 |
MMAR444158 ncbi | Methanococcus maripaludis C6 | 0 |
MMAR426368 ncbi | Methanococcus maripaludis C7 | 0 |
MMAR402880 ncbi | Methanococcus maripaludis C5 | 0 |
MMAR368407 ncbi | Methanoculleus marisnigri JR1 | 0 |
MMAR267377 ncbi | Methanococcus maripaludis S2 | 0 |
MLEP272631 ncbi | Mycobacterium leprae TN | 0 |
MLAB410358 ncbi | Methanocorpusculum labreanum Z | 0 |
MKAN190192 ncbi | Methanopyrus kandleri AV19 | 0 |
MJAN243232 ncbi | Methanocaldococcus jannaschii DSM 2661 | 0 |
MHYO295358 ncbi | Mycoplasma hyopneumoniae 232 | 0 |
MHYO262722 ncbi | Mycoplasma hyopneumoniae 7448 | 0 |
MHYO262719 ncbi | Mycoplasma hyopneumoniae J | 0 |
MHUN323259 ncbi | Methanospirillum hungatei JF-1 | 0 |
MGEN243273 ncbi | Mycoplasma genitalium G37 | 0 |
MFLO265311 ncbi | Mesoplasma florum L1 | 0 |
MFLA265072 ncbi | Methylobacillus flagellatus KT | 0 |
MCAP340047 ncbi | Mycoplasma capricolum capricolum ATCC 27343 | 0 |
MBUR259564 ncbi | Methanococcoides burtonii DSM 6242 | 0 |
MBOV410289 ncbi | Mycobacterium bovis BCG str. Pasteur 1173P2 | 1 |
MBOV233413 ncbi | Mycobacterium bovis AF2122/97 | 1 |
MBAR269797 ncbi | Methanosarcina barkeri Fusaro | 0 |
MART243272 ncbi | Mycoplasma arthritidis 158L3-1 | 0 |
MAEO419665 ncbi | Methanococcus aeolicus Nankai-3 | 0 |
MACE188937 ncbi | Methanosarcina acetivorans C2A | 0 |
LXYL281090 ncbi | Leifsonia xyli xyli CTCB07 | 1 |
LREU557436 ncbi | Lactobacillus reuteri DSM 20016 | 0 |
LPLA220668 ncbi | Lactobacillus plantarum WCFS1 | 1 |
LLAC272622 ncbi | Lactococcus lactis cremoris SK11 | 0 |
LJOH257314 ncbi | Lactobacillus johnsonii NCC 533 | 0 |
LINT363253 ncbi | Lawsonia intracellularis PHE/MN1-00 | 0 |
LINT267671 ncbi | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 | 0 |
LINT189518 ncbi | Leptospira interrogans serovar Lai str. 56601 | 0 |
LHEL405566 ncbi | Lactobacillus helveticus DPC 4571 | 0 |
LGAS324831 ncbi | Lactobacillus gasseri ATCC 33323 | 0 |
LDEL390333 ncbi | Lactobacillus delbrueckii bulgaricus ATCC 11842 | 0 |
LDEL321956 ncbi | Lactobacillus delbrueckii bulgaricus ATCC BAA-365 | 0 |
LBRE387344 ncbi | Lactobacillus brevis ATCC 367 | 1 |
LBOR355277 ncbi | Leptospira borgpetersenii serovar Hardjo-bovis JB197 | 0 |
LBOR355276 ncbi | Leptospira borgpetersenii serovar Hardjo-bovis L550 | 0 |
LBIF456481 ncbi | Leptospira biflexa serovar Patoc strain Patoc 1 (Paris) | 0 |
LBIF355278 ncbi | Leptospira biflexa serovar Patoc strain Patoc 1 (Ames) | 0 |
LACI272621 ncbi | Lactobacillus acidophilus NCFM | 0 |
IHOS453591 ncbi | Ignicoccus hospitalis KIN4/I | 0 |
HWAL362976 ncbi | Haloquadratum walsbyi DSM 16790 | 0 |
HSP64091 ncbi | Halobacterium sp. NRC-1 | 0 |
HSAL478009 ncbi | Halobacterium salinarum R1 | 0 |
HPYL85963 ncbi | Helicobacter pylori J99 | 0 |
HPYL357544 ncbi | Helicobacter pylori HPAG1 | 0 |
HPY ncbi | Helicobacter pylori 26695 | 0 |
HMUK485914 ncbi | Halomicrobium mukohataei DSM 12286 | 1 |
HMOD498761 ncbi | Heliobacterium modesticaldum Ice1 | 0 |
HMAR272569 ncbi | Haloarcula marismortui ATCC 43049 | 0 |
HINF374930 ncbi | Haemophilus influenzae PittEE | 0 |
HINF281310 ncbi | Haemophilus influenzae 86-028NP | 0 |
HHEP235279 ncbi | Helicobacter hepaticus ATCC 51449 | 0 |
HDUC233412 ncbi | Haemophilus ducreyi 35000HP | 0 |
HBUT415426 ncbi | Hyperthermus butylicus DSM 5456 | 0 |
HACI382638 ncbi | Helicobacter acinonychis Sheeba | 0 |
GVIO251221 ncbi | Gloeobacter violaceus PCC 7421 | 0 |
GURA351605 ncbi | Geobacter uraniireducens Rf4 | 1 |
GSUL243231 ncbi | Geobacter sulfurreducens PCA | 1 |
GOXY290633 ncbi | Gluconobacter oxydans 621H | 0 |
GFOR411154 ncbi | Gramella forsetii KT0803 | 1 |
FTUL458234 ncbi | Francisella tularensis holarctica FTNF002-00 | 0 |
FTUL418136 ncbi | Francisella tularensis tularensis WY96-3418 | 0 |
FTUL401614 ncbi | Francisella novicida U112 | 0 |
FTUL393115 ncbi | Francisella tularensis tularensis FSC198 | 0 |
FTUL393011 ncbi | Francisella tularensis holarctica OSU18 | 0 |
FTUL351581 | Francisella tularensis holarctica FSC200 | 0 |
FSUC59374 ncbi | Fibrobacter succinogenes succinogenes S85 | 0 |
FRANT ncbi | Francisella tularensis tularensis SCHU S4 | 0 |
FPHI484022 ncbi | Francisella philomiragia philomiragia ATCC 25017 | 0 |
FNUC190304 ncbi | Fusobacterium nucleatum nucleatum ATCC 25586 | 0 |
FNOD381764 ncbi | Fervidobacterium nodosum Rt17-B1 | 0 |
FMAG334413 ncbi | Finegoldia magna ATCC 29328 | 0 |
ERUM302409 ncbi | Ehrlichia ruminantium Gardel | 0 |
ERUM254945 ncbi | Ehrlichia ruminantium Welgevonden | 0 |
ECHA205920 ncbi | Ehrlichia chaffeensis Arkansas | 0 |
ECAN269484 ncbi | Ehrlichia canis Jake | 0 |
DVUL882 ncbi | Desulfovibrio vulgaris Hildenborough | 0 |
DSP255470 ncbi | Dehalococcoides sp. CBDB1 | 0 |
DSP216389 ncbi | Dehalococcoides sp. BAV1 | 0 |
DRED349161 ncbi | Desulfotomaculum reducens MI-1 | 0 |
DRAD243230 ncbi | Deinococcus radiodurans R1 | 0 |
DPSY177439 ncbi | Desulfotalea psychrophila LSv54 | 0 |
DOLE96561 ncbi | Desulfococcus oleovorans Hxd3 | 0 |
DNOD246195 ncbi | Dichelobacter nodosus VCS1703A | 0 |
DETH243164 ncbi | Dehalococcoides ethenogenes 195 | 0 |
DDES207559 ncbi | Desulfovibrio desulfuricans desulfuricans G20 | 0 |
CVES412965 ncbi | Candidatus Vesicomyosocius okutanii HA | 0 |
CTRA471473 ncbi | Chlamydia trachomatis L2b/UCH-1/proctitis | 0 |
CTRA471472 ncbi | Chlamydia trachomatis 434/Bu | 0 |
CTET212717 ncbi | Clostridium tetani E88 | 0 |
CTEP194439 ncbi | Chlorobium tepidum TLS | 0 |
CSUL444179 ncbi | Candidatus Sulcia muelleri GWSS | 0 |
CRUT413404 ncbi | Candidatus Ruthia magnifica Cm (Calyptogena magnifica) | 0 |
CPRO264201 ncbi | Candidatus Protochlamydia amoebophila UWE25 | 0 |
CPNE182082 ncbi | Chlamydophila pneumoniae TW-183 | 0 |
CPNE138677 ncbi | Chlamydophila pneumoniae J138 | 0 |
CPNE115713 ncbi | Chlamydophila pneumoniae CWL029 | 0 |
CPNE115711 ncbi | Chlamydophila pneumoniae AR39 | 0 |
CPHY357809 ncbi | Clostridium phytofermentans ISDg | 0 |
CPER289380 ncbi | Clostridium perfringens SM101 | 0 |
CNOV386415 ncbi | Clostridium novyi NT | 0 |
CMUR243161 ncbi | Chlamydia muridarum Nigg | 0 |
CMIC443906 ncbi | Clavibacter michiganensis michiganensis NCPPB 382 | 0 |
CMIC31964 ncbi | Clavibacter michiganensis sepedonicus | 0 |
CMET456442 ncbi | Candidatus Methanoregula boonei 6A8 | 0 |
CKOR374847 ncbi | Candidatus Korarchaeum cryptofilum OPF8 | 0 |
CKLU431943 ncbi | Clostridium kluyveri DSM 555 | 0 |
CJEJ407148 ncbi | Campylobacter jejuni jejuni 81116 | 0 |
CJEJ360109 ncbi | Campylobacter jejuni doylei 269.97 | 0 |
CJEJ354242 ncbi | Campylobacter jejuni jejuni 81-176 | 0 |
CJEJ195099 ncbi | Campylobacter jejuni RM1221 | 0 |
CJEJ192222 ncbi | Campylobacter jejuni jejuni NCTC 11168 | 0 |
CJEI306537 ncbi | Corynebacterium jeikeium K411 | 0 |
CJAP155077 | Cellvibrio japonicus | 0 |
CHYD246194 ncbi | Carboxydothermus hydrogenoformans Z-2901 | 0 |
CHUT269798 ncbi | Cytophaga hutchinsonii ATCC 33406 | 0 |
CHOM360107 ncbi | Campylobacter hominis ATCC BAA-381 | 0 |
CFET360106 ncbi | Campylobacter fetus fetus 82-40 | 0 |
CFEL264202 ncbi | Chlamydophila felis Fe/C-56 | 0 |
CDIP257309 ncbi | Corynebacterium diphtheriae NCTC 13129 | 1 |
CDES477974 ncbi | Candidatus Desulforudis audaxviator MP104C | 0 |
CCUR360105 ncbi | Campylobacter curvus 525.92 | 0 |
CCON360104 ncbi | Campylobacter concisus 13826 | 0 |
CCHL340177 ncbi | Chlorobium chlorochromatii CaD3 | 0 |
CCAV227941 ncbi | Chlamydophila caviae GPIC | 0 |
CBUR434922 ncbi | Coxiella burnetii Dugway 5J108-111 | 1 |
CBUR360115 ncbi | Coxiella burnetii RSA 331 | 1 |
CBUR227377 ncbi | Coxiella burnetii RSA 493 | 1 |
CBOT536232 ncbi | Clostridium botulinum A2 str. Kyoto | 0 |
CBOT515621 ncbi | Clostridium botulinum Ba4 str. 657 | 0 |
CBOT498213 ncbi | Clostridium botulinum B1 str. Okra | 0 |
CBOT441772 ncbi | Clostridium botulinum F str. Langeland | 0 |
CBOT441771 ncbi | Clostridium botulinum A str. Hall | 0 |
CBOT441770 ncbi | Clostridium botulinum A str. ATCC 19397 | 0 |
CBOT36826 | Clostridium botulinum A | 0 |
CBLO291272 ncbi | Candidatus Blochmannia pennsylvanicus BPEN | 0 |
CBLO203907 ncbi | Candidatus Blochmannia floridanus | 0 |
CAULO ncbi | Caulobacter crescentus CB15 | 1 |
CABO218497 ncbi | Chlamydophila abortus S26/3 | 0 |
BTUR314724 ncbi | Borrelia turicatae 91E135 | 0 |
BTRI382640 ncbi | Bartonella tribocorum CIP 105476 | 0 |
BTHE226186 ncbi | Bacteroides thetaiotaomicron VPI-5482 | 0 |
BSP107806 ncbi | Buchnera aphidicola APS (Acyrthosiphon pisum) | 0 |
BQUI283165 ncbi | Bartonella quintana Toulouse | 0 |
BMAL320388 ncbi | Burkholderia mallei SAVP1 | 0 |
BLON206672 ncbi | Bifidobacterium longum NCC2705 | 0 |
BHER314723 ncbi | Borrelia hermsii DAH | 0 |
BHEN283166 ncbi | Bartonella henselae Houston-1 | 0 |
BGAR290434 ncbi | Borrelia garinii PBi | 0 |
BFRA295405 ncbi | Bacteroides fragilis YCH46 | 0 |
BFRA272559 ncbi | Bacteroides fragilis NCTC 9343 | 0 |
BCIC186490 | Candidatus Baumannia cicadellinicola | 0 |
BBUR224326 ncbi | Borrelia burgdorferi B31 | 0 |
BBAC360095 ncbi | Bartonella bacilliformis KC583 | 0 |
BBAC264462 ncbi | Bdellovibrio bacteriovorus HD100 | 0 |
BAPH372461 ncbi | Buchnera aphidicola Cc (Cinara cedri) | 0 |
BAPH198804 ncbi | Buchnera aphidicola Sg (Schizaphis graminum) | 0 |
BAFZ390236 ncbi | Borrelia afzelii PKo | 0 |
AYEL322098 ncbi | Aster yellows witches-broom phytoplasma AYWB | 0 |
AVAR240292 ncbi | Anabaena variabilis ATCC 29413 | 0 |
AURANTIMONAS | Aurantimonas manganoxydans SI85-9A1 | 0 |
APLE434271 ncbi | Actinobacillus pleuropneumoniae serovar 3 str. JL03 | 0 |
APLE416269 ncbi | Actinobacillus pleuropneumoniae L20 | 0 |
APHA212042 ncbi | Anaplasma phagocytophilum HZ | 0 |
APER272557 ncbi | Aeropyrum pernix K1 | 0 |
AORE350688 ncbi | Alkaliphilus oremlandii OhILAs | 0 |
ANAE240017 | Actinomyces oris MG1 | 0 |
AMAR329726 ncbi | Acaryochloris marina MBIC11017 | 0 |
AMAR234826 ncbi | Anaplasma marginale St. Maries | 0 |
ALAI441768 ncbi | Acholeplasma laidlawii PG-8A | 1 |
AFUL224325 ncbi | Archaeoglobus fulgidus DSM 4304 | 0 |
AFER243159 ncbi | Acidithiobacillus ferrooxidans ATCC 23270 | 0 |
ADEH290397 ncbi | Anaeromyxobacter dehalogenans 2CP-C | 0 |
ACEL351607 ncbi | Acidothermus cellulolyticus 11B | 0 |
ABAC204669 ncbi | Candidatus Koribacter versatilis Ellin345 | 1 |
Feature | Pvalue | Num occurrences in list | Total num occurrences |
Arrangment:Clusters | 0.0023214 | 15 | 17 |
Disease:Gastroenteritis | 0.0043852 | 2 | 13 |
Disease:Pharyngitis | 0.0066190 | 8 | 8 |
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever | 0.0009833 | 11 | 11 |
Disease:Wide_range_of_infections | 0.0009833 | 11 | 11 |
Disease:bronchitis_and_pneumonitis | 0.0066190 | 8 | 8 |
Endospores:No | 2.563e-10 | 149 | 211 |
Endospores:Yes | 0.0059636 | 20 | 53 |
GC_Content_Range4:0-40 | 1.742e-24 | 172 | 213 |
GC_Content_Range4:40-60 | 0.0014560 | 104 | 224 |
GC_Content_Range4:60-100 | 3.474e-16 | 36 | 145 |
GC_Content_Range7:0-30 | 2.071e-6 | 40 | 47 |
GC_Content_Range7:30-40 | 4.462e-16 | 132 | 166 |
GC_Content_Range7:50-60 | 0.0000791 | 40 | 107 |
GC_Content_Range7:60-70 | 6.109e-15 | 33 | 134 |
Genome_Size_Range5:0-2 | 1.695e-41 | 149 | 155 |
Genome_Size_Range5:2-4 | 0.0000642 | 127 | 197 |
Genome_Size_Range5:4-6 | 1.911e-35 | 31 | 184 |
Genome_Size_Range5:6-10 | 1.318e-9 | 6 | 47 |
Genome_Size_Range9:0-1 | 2.957e-8 | 27 | 27 |
Genome_Size_Range9:1-2 | 2.487e-31 | 122 | 128 |
Genome_Size_Range9:2-3 | 1.236e-9 | 93 | 120 |
Genome_Size_Range9:4-5 | 1.632e-11 | 22 | 96 |
Genome_Size_Range9:5-6 | 2.240e-20 | 9 | 88 |
Genome_Size_Range9:6-8 | 1.014e-8 | 4 | 38 |
Gram_Stain:Gram_Neg | 1.196e-6 | 151 | 333 |
Habitat:Host-associated | 8.708e-10 | 145 | 206 |
Habitat:Multiple | 1.766e-8 | 65 | 178 |
Habitat:Terrestrial | 0.0073810 | 10 | 31 |
Motility:No | 1.223e-7 | 108 | 151 |
Motility:Yes | 1.314e-15 | 96 | 267 |
Optimal_temp.:25-30 | 0.0000820 | 2 | 19 |
Optimal_temp.:30-37 | 0.0065949 | 15 | 18 |
Optimal_temp.:37 | 0.0015705 | 70 | 106 |
Oxygen_Req:Aerobic | 0.0027445 | 85 | 185 |
Oxygen_Req:Anaerobic | 9.423e-13 | 86 | 102 |
Oxygen_Req:Facultative | 5.401e-6 | 83 | 201 |
Pathogenic_in:Human | 0.0091752 | 126 | 213 |
Shape:Coccus | 1.719e-7 | 65 | 82 |
Shape:Irregular_coccus | 0.0003215 | 16 | 17 |
Shape:Rod | 2.342e-22 | 130 | 347 |
Shape:Sphere | 0.0008078 | 17 | 19 |
Shape:Spiral | 0.0000586 | 29 | 34 |
Temp._range:Mesophilic | 0.0091260 | 244 | 473 |
Temp._range:Psychrophilic | 0.0097987 | 1 | 9 |
Pathway or complex | # Orgs containing it | # of those orgs also containing candidate | Pearson Coeff |
GLUCARDEG-PWY (D-glucarate degradation I) | 152 | 96 | 0.5873 |
GALACTARDEG-PWY (D-galactarate degradation I) | 151 | 93 | 0.5630 |
GALACTCAT-PWY (D-galactonate degradation) | 104 | 75 | 0.5612 |
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation) | 135 | 83 | 0.5221 |
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I) | 195 | 102 | 0.5181 |
CHOLINE-BETAINE-ANA-PWY (choline degradation I) | 135 | 82 | 0.5126 |
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria)) | 138 | 83 | 0.5121 |
P344-PWY (acrylonitrile degradation) | 210 | 104 | 0.4986 |
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation) | 149 | 85 | 0.4956 |
GALLATE-DEGRADATION-I-PWY (gallate degradation I) | 83 | 60 | 0.4932 |
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation) | 212 | 101 | 0.4691 |
PWY-2361 (3-oxoadipate degradation) | 82 | 57 | 0.4632 |
4-HYDROXYMANDELATE-DEGRADATION-PWY (4-hydroxymandelate degradation) | 102 | 64 | 0.4530 |
PWY-5148 (acyl-CoA hydrolysis) | 227 | 102 | 0.4442 |
PWY-6185 (4-methylcatechol degradation (ortho cleavage)) | 107 | 65 | 0.4439 |
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer) | 112 | 66 | 0.4354 |
GLYCOLATEMET-PWY (glycolate and glyoxylate degradation I) | 270 | 111 | 0.4310 |
PWY-6223 (gentisate degradation) | 38 | 34 | 0.4281 |
CATECHOL-ORTHO-CLEAVAGE-PWY (catechol degradation to β-ketoadipate) | 103 | 62 | 0.4278 |
PWY0-981 (taurine degradation IV) | 106 | 63 | 0.4268 |
PWY-3941 (β-alanine biosynthesis II) | 117 | 66 | 0.4175 |
REDCITCYC (TCA cycle variation II) | 174 | 84 | 0.4163 |
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I) | 225 | 98 | 0.4157 |
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I) | 249 | 104 | 0.4153 |
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff) | 249 | 104 | 0.4153 |
PWY-4221 (pantothenate and coenzymeA biosynthesis II) | 112 | 64 | 0.4149 |
PWY0-321 (phenylacetate degradation I (aerobic)) | 155 | 78 | 0.4137 |
PWY-5431 (aromatic compounds degradation via β-ketoadipate) | 48 | 38 | 0.4122 |
GALACTITOLCAT-PWY (galactitol degradation) | 73 | 49 | 0.4121 |
PWY-6196 (serine racemization) | 102 | 60 | 0.4104 |
PWY-5697 (allantoin degradation to ureidoglycolate I (urea producing)) | 92 | 56 | 0.4070 |
PWY-5025 (IAA biosynthesis IV) | 92 | 56 | 0.4070 |
PWY-4041 (γ-glutamyl cycle) | 279 | 110 | 0.4066 |
GLYCOCAT-PWY (glycogen degradation I) | 246 | 102 | 0.4051 |
PWY-561 (superpathway of glyoxylate cycle) | 162 | 79 | 0.4035 |
LIPA-CORESYN-PWY (Lipid A-core biosynthesis) | 176 | 83 | 0.4024 |
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis) | 300 | 114 | 0.4014 |
G7417 | G6278 | G6277 | EG11847 | EG11176 | |
G7420 | 0.999376 | 0.998977 | 0.999817 | 0.998965 | 0.999266 |
G7417 | 0.999617 | 0.998991 | 0.99974 | 0.999696 | |
G6278 | 0.999425 | 0.99962 | 0.999925 | ||
G6277 | 0.998927 | 0.999395 | |||
EG11847 | 0.999677 | ||||
EG11176 |
G7420 | G7417 | G6278 | G6277 | EG11847 | EG11176 | |
G7420 | 0.0f0 | - | - | 7.8e-51 | - | - |
G7417 | - | 0.0f0 | - | - | 2.7e-25 | 2.5e-31 |
G6278 | - | - | 0.0f0 | - | - | 3.0e-58 |
G6277 | 7.8e-51 | - | - | 0.0f0 | - | - |
EG11847 | - | 1.1e-26 | 2.1e-25 | - | 0.0f0 | 6.3e-33 |
EG11176 | - | 2.9e-37 | 3.2e-54 | - | 1.6e-36 | 0.0f0 |