CANDIDATE ID: 401

CANDIDATE ID: 401

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9931787e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G7656 (obgE) (b3183)
   Products of gene:
     - G7656-MONOMER (GTPase involved in chromosome partitioning and ribosome assembly)

- G6350 (nadD) (b0639)
   Products of gene:
     - NICONUCADENYLYLTRAN-MONOMER (nicotinate-mononucleotide adenylyltransferase)
       Reactions:
        ATP + nicotinate mononucleotide  ->  diphosphate + nicotinate adenine dinucleotide
         In pathways
         PWY-3502 (PWY-3502)
         PWY0-781 (aspartate superpathway)
         NADSYN-PWY (NADSYN-PWY)
         PYRIDNUCSAL-PWY (NAD salvage pathway I)
         PYRIDNUCSYN-PWY (NAD biosynthesis I (from aspartate))
         PWY-5381 (PWY-5381)
         PWY-5653 (PWY-5653)

- EG50002 (rpmA) (b3185)
   Products of gene:
     - EG50002-MONOMER (50S ribosomal subunit protein L27)
     - CPLX0-3962 (50S ribosomal subunit)
     - CPLX0-3964 (ribosome)

- EG11255 (ybeB) (b0637)
   Products of gene:
     - EG11255-MONOMER (predicted protein)

- EG10768 (proB) (b0242)
   Products of gene:
     - GLUTKIN-MONOMER (ProB)
     - GLUTKIN-CPLX (γ-glutamyl kinase)
       Reactions:
        L-glutamate + ATP  ->  L-glutamate-5-phosphate + ADP + H+
         In pathways
         PWY-5004 (PWY-5004)
         PROSYN-PWY (proline biosynthesis I)
         CITRULBIO-PWY (CITRULBIO-PWY)
     - PROLINEMULTI-CPLX (γ-glutamyl kinase-GP-reductase multienzyme complex)
       Reactions:
        L-glutamate + ATP + NADPH  ->  ADP + L-glutamate gamma-semialdehyde + NADP+ + phosphate
         In pathways
         ARGININE-SYN4-PWY (ARGININE-SYN4-PWY)
         PWY-3341 (PWY-3341)

- EG10767 (proA) (b0243)
   Products of gene:
     - GLUTSEMIALDEHYDROG-MONOMER (ProA)
     - GLUTSEMIALDEHYDROG-CPLX (glutamate-5-semialdehyde dehydrogenase)
       Reactions:
        L-glutamate-5-phosphate + NADPH + H+  ->  L-glutamate gamma-semialdehyde + phosphate + NADP+
         In pathways
         PWY-5004 (PWY-5004)
         PROSYN-PWY (proline biosynthesis I)
         CITRULBIO-PWY (CITRULBIO-PWY)
     - PROLINEMULTI-CPLX (γ-glutamyl kinase-GP-reductase multienzyme complex)
       Reactions:
        L-glutamate + ATP + NADPH  ->  ADP + L-glutamate gamma-semialdehyde + NADP+ + phosphate
         In pathways
         ARGININE-SYN4-PWY (ARGININE-SYN4-PWY)
         PWY-3341 (PWY-3341)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 317
Effective number of orgs (counting one per cluster within 468 clusters): 231

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM45
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola6
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A6
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110186
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103316
XFAS405440 ncbi Xylella fastidiosa M126
XFAS183190 ncbi Xylella fastidiosa Temecula16
XFAS160492 ncbi Xylella fastidiosa 9a5c6
XCAM487884 Xanthomonas campestris pv. paulliniae6
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-106
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80046
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339136
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3066
XAUT78245 ncbi Xanthobacter autotrophicus Py25
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1145
VEIS391735 ncbi Verminephrobacter eiseniae EF01-25
VCHO345073 ncbi Vibrio cholerae O3955
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
TTUR377629 ncbi Teredinibacter turnerae T79015
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB46
TSP28240 Thermotoga sp.5
TSP1755 Thermoanaerobacter sp.6
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332236
TPET390874 ncbi Thermotoga petrophila RKU-15
TMAR243274 ncbi Thermotoga maritima MSB85
TFUS269800 ncbi Thermobifida fusca YX5
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252596
TCRU317025 ncbi Thiomicrospira crunogena XCL-26
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen5
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
STHE292459 ncbi Symbiobacterium thermophilum IAM 148635
SSUI391296 ncbi Streptococcus suis 98HAH335
SSUI391295 ncbi Streptococcus suis 05ZYH335
SSP94122 ncbi Shewanella sp. ANA-36
SSP644076 Silicibacter sp. TrichCH4B6
SSP292414 ncbi Ruegeria sp. TM10406
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB36
SRUB309807 ncbi Salinibacter ruber DSM 138555
SPRO399741 ncbi Serratia proteamaculans 5686
SPNE488221 ncbi Streptococcus pneumoniae 705855
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-65
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-145
SPNE171101 ncbi Streptococcus pneumoniae R65
SPNE1313 Streptococcus pneumoniae5
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SONE211586 ncbi Shewanella oneidensis MR-16
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLOI323850 ncbi Shewanella loihica PV-46
SLAC55218 Ruegeria lacuscaerulensis5
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SGOR29390 Streptococcus gordonii Challis5
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB6
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23385
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-406
SBOY300268 ncbi Shigella boydii Sb2276
SBAL402882 ncbi Shewanella baltica OS1856
SBAL399599 ncbi Shewanella baltica OS1956
SALA317655 ncbi Sphingopyxis alaskensis RB22565
SACI56780 ncbi Syntrophus aciditrophicus SB6
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170295
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.15
RSP357808 ncbi Roseiflexus sp. RS-15
RSOL267608 ncbi Ralstonia solanacearum GMI10006
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RPOM246200 ncbi Ruegeria pomeroyi DSS-35
RPAL316058 ncbi Rhodopseudomonas palustris HaA25
RPAL316057 ncbi Rhodopseudomonas palustris BisB55
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH346
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1346
RDEN375451 ncbi Roseobacter denitrificans OCh 1145
RCAS383372 ncbi Roseiflexus castenholzii DSM 139416
PTHE370438 ncbi Pelotomaculum thermopropionicum SI6
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP56811 Psychrobacter sp.6
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-16
PSP296591 ncbi Polaromonas sp. JS6666
PSP117 Pirellula sp.6
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PPRO298386 ncbi Photobacterium profundum SS95
PNAP365044 ncbi Polaromonas naphthalenivorans CJ25
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUT319225 ncbi Chlorobium luteolum DSM 2735
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PING357804 ncbi Psychromonas ingrahamii 376
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PCRY335284 ncbi Psychrobacter cryohalolentis K55
PCAR338963 ncbi Pelobacter carbinolicus DSM 23806
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PARC259536 ncbi Psychrobacter arcticus 273-46
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
OIHE221109 ncbi Oceanobacillus iheyensis HTE8315
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2555
NSP103690 ncbi Nostoc sp. PCC 71205
NOCE323261 ncbi Nitrosococcus oceani ATCC 197076
NMUL323848 ncbi Nitrosospira multiformis ATCC 251966
NMEN374833 ncbi Neisseria meningitidis 0534426
NMEN272831 ncbi Neisseria meningitidis FAM186
NMEN122587 ncbi Neisseria meningitidis Z24916
NMEN122586 ncbi Neisseria meningitidis MC586
NHAM323097 ncbi Nitrobacter hamburgensis X145
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NFAR247156 ncbi Nocardia farcinica IFM 101525
NEUT335283 ncbi Nitrosomonas eutropha C916
NEUR228410 ncbi Nitrosomonas europaea ATCC 197186
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124445
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-15
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra5
MTUB336982 ncbi Mycobacterium tuberculosis F115
MTHE264732 ncbi Moorella thermoacetica ATCC 390736
MTBRV ncbi Mycobacterium tuberculosis H37Rv5
MTBCDC ncbi Mycobacterium tuberculosis CDC15515
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP409 Methylobacterium sp.5
MSP400668 ncbi Marinomonas sp. MWYL16
MSP266779 ncbi Chelativorans sp. BNC15
MSME246196 ncbi Mycobacterium smegmatis MC2 1555
MPET420662 ncbi Methylibium petroleiphilum PM16
MMAR394221 ncbi Maricaulis maris MCS105
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK5
MFLA265072 ncbi Methylobacillus flagellatus KT6
MEXT419610 ncbi Methylobacterium extorquens PA16
MCAP243233 ncbi Methylococcus capsulatus Bath6
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P25
MBOV233413 ncbi Mycobacterium bovis AF2122/975
MAVI243243 ncbi Mycobacterium avium 1045
MAQU351348 ncbi Marinobacter aquaeolei VT86
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53346
LPLA220668 ncbi Lactobacillus plantarum WCFS15
LMON265669 ncbi Listeria monocytogenes 4b F23656
LMON169963 ncbi Listeria monocytogenes EGD-e6
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82935
LLAC272623 ncbi Lactococcus lactis lactis Il14035
LLAC272622 ncbi Lactococcus lactis cremoris SK115
LINN272626 ncbi Listeria innocua Clip112626
LCHO395495 ncbi Leptothrix cholodnii SP-66
LCAS321967 ncbi Lactobacillus casei ATCC 3345
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille6
JSP290400 ncbi Jannaschia sp. CCS15
ILOI283942 ncbi Idiomarina loihiensis L2TR6
HSOM228400 ncbi Haemophilus somnus 23365
HSOM205914 ncbi Haemophilus somnus 129PT5
HMOD498761 ncbi Heliobacterium modesticaldum Ice16
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF374930 ncbi Haemophilus influenzae PittEE5
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HHAL349124 ncbi Halorhodospira halophila SL16
HCHE349521 ncbi Hahella chejuensis KCTC 23966
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237795
HARS204773 ncbi Herminiimonas arsenicoxydans6
GVIO251221 ncbi Gloeobacter violaceus PCC 74215
GURA351605 ncbi Geobacter uraniireducens Rf46
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GSUL243231 ncbi Geobacter sulfurreducens PCA6
GOXY290633 ncbi Gluconobacter oxydans 621H5
GMET269799 ncbi Geobacter metallireducens GS-156
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250175
ESP42895 Enterobacter sp.6
ELIT314225 ncbi Erythrobacter litoralis HTCC25945
EFER585054 ncbi Escherichia fergusonii ATCC 354696
EFAE226185 ncbi Enterococcus faecalis V5835
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough6
DSHI398580 ncbi Dinoroseobacter shibae DFL 125
DRED349161 ncbi Desulfotomaculum reducens MI-16
DPSY177439 ncbi Desulfotalea psychrophila LSv546
DOLE96561 ncbi Desulfococcus oleovorans Hxd36
DHAF138119 ncbi Desulfitobacterium hafniense Y516
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G205
DARO159087 ncbi Dechloromonas aromatica RCB6
CVIO243365 ncbi Chromobacterium violaceum ATCC 124726
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA5
CTEP194439 ncbi Chlorobium tepidum TLS5
CSAL290398 ncbi Chromohalobacter salexigens DSM 30436
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)6
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CPER289380 ncbi Clostridium perfringens SM1015
CPER195103 ncbi Clostridium perfringens ATCC 131245
CPER195102 ncbi Clostridium perfringens 135
CJEI306537 ncbi Corynebacterium jeikeium K4115
CJAP155077 Cellvibrio japonicus6
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29016
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C6
CCHL340177 ncbi Chlorobium chlorochromatii CaD35
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B5
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80525
CAULO ncbi Caulobacter crescentus CB155
CACE272562 ncbi Clostridium acetobutylicum ATCC 8245
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTRI382640 ncbi Bartonella tribocorum CIP 1054765
BTHU412694 ncbi Bacillus thuringiensis Al Hakam5
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-275
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54825
BTHA271848 ncbi Burkholderia thailandensis E2646
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13306
BSUB ncbi Bacillus subtilis subtilis 1685
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.6
BPUM315750 ncbi Bacillus pumilus SAFR-0325
BPSE320373 ncbi Burkholderia pseudomallei 6686
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962436
BPET94624 Bordetella petrii6
BPER257313 ncbi Bordetella pertussis Tohama I6
BPAR257311 ncbi Bordetella parapertussis 128226
BOVI236 Brucella ovis5
BMEL359391 ncbi Brucella melitensis biovar Abortus 23085
BMAL320389 ncbi Burkholderia mallei NCTC 102476
BMAL320388 ncbi Burkholderia mallei SAVP16
BMAL243160 ncbi Burkholderia mallei ATCC 233446
BLON206672 ncbi Bifidobacterium longum NCC27055
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BHEN283166 ncbi Bartonella henselae Houston-15
BHAL272558 ncbi Bacillus halodurans C-1255
BFRA295405 ncbi Bacteroides fragilis YCH465
BFRA272559 ncbi Bacteroides fragilis NCTC 93435
BCLA66692 ncbi Bacillus clausii KSM-K165
BCER572264 ncbi Bacillus cereus 03BB1025
BCER405917 Bacillus cereus W5
BCER288681 ncbi Bacillus cereus E33L5
BCEN331272 ncbi Burkholderia cenocepacia HI24246
BCEN331271 ncbi Burkholderia cenocepacia AU 10546
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB506
BBAC360095 ncbi Bartonella bacilliformis KC5835
BANT592021 ncbi Bacillus anthracis A02485
BANT568206 ncbi Bacillus anthracis CDC 6845
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BANT260799 ncbi Bacillus anthracis Sterne5
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
AVAR240292 ncbi Anabaena variabilis ATCC 294135
ASP76114 ncbi Aromatoleum aromaticum EbN16
ASP62977 ncbi Acinetobacter sp. ADP15
ASP62928 ncbi Azoarcus sp. BH726
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
ANAE240017 Actinomyces oris MG15
AMET293826 ncbi Alkaliphilus metalliredigens QYMF6
AHYD196024 Aeromonas hydrophila dhakensis6
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232706
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-16
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ACAU438753 ncbi Azorhizobium caulinodans ORS 5715
ABOR393595 ncbi Alcanivorax borkumensis SK26
ABAU360910 ncbi Bordetella avium 197N6
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455
AAVE397945 ncbi Acidovorax citrulli AAC00-15
AAEO224324 ncbi Aquifex aeolicus VF56


Names of the homologs of the genes in the group in each of these orgs
  G7656   G6350   EG50002   EG11255   EG10768   EG10767   
ZMOB264203 ZMO0207ZMO0209ZMO1663ZMO0206ZMO1661
YPSE349747 YPSIP31758_3609YPSIP31758_2929YPSIP31758_3611YPSIP31758_2947YPSIP31758_3150YPSIP31758_3149
YPSE273123 YPTB0467YPTB1100YPTB0465YPTB1099YPTB0904YPTB0905
YPES386656 YPDSF_3558YPDSF_2646YPDSF_3560YPDSF_2647YPDSF_2851YPDSF_2850
YPES377628 YPN_3253YPN_1092YPN_3255YPN_1091YPN_0871YPN_0872
YPES360102 YPA_0059YPA_2490YPA_0061YPA_2491YPA_2714YPA_2713
YPES349746 YPANGOLA_A3978YPANGOLA_A1845YPANGOLA_A3975YPANGOLA_A1846YPANGOLA_A3301YPANGOLA_A3300
YPES214092 YPO3509YPO2607YPO3511YPO2606YPO3222YPO3221
YPES187410 Y0675Y1181Y0673Y1180Y0966Y0967
YENT393305 YE0421YE2999YE0419YE3000YE3202YE3201
XORY360094 XOOORF_1570XOOORF_3683XOOORF_1569XOOORF_3682XOOORF_2048XOOORF_2049
XORY342109 XOO1508XOO3139XOO1507XOO3138XOO2512XOO2511
XORY291331 XOO1622XOO3326XOO1621XOO3325XOO2666XOO2665
XFAS405440 XFASM12_1582XFASM12_1379XFASM12_1583XFASM12_1380XFASM12_0320XFASM12_0321
XFAS183190 PD_1441PD_1233PD_1442PD_1234PD_0296PD_0297
XFAS160492 XF2422XF2179XF2423XF2180XF1004XF1005
XCAM487884 XCC-B100_3187XCC-B100_1544XCC-B100_3188XCC-B100_1545XCC-B100_1940XCC-B100_1941
XCAM316273 XCAORF_1379XCAORF_2962XCAORF_1378XCAORF_2961XCAORF_2508XCAORF_2507
XCAM314565 XC_3091XC_1500XC_3092XC_1501XC_1879XC_1880
XCAM190485 XCC1151XCC2616XCC1150XCC2615XCC2239XCC2238
XAXO190486 XAC1250XAC2778XAC1249XAC2777XAC2343XAC2342
XAUT78245 XAUT_2055XAUT_2143XAUT_2060XAUT_2056XAUT_2058
VVUL216895 VV1_0669VV1_0670VV1_0276VV1_0326VV1_0325
VVUL196600 VV0472VV0471VV0908VV0858VV0859
VPAR223926 VP0330VP0329VP0724VP0676VP0677
VFIS312309 VF0280VF0279VF0750VF0740VF0741
VEIS391735 VEIS_3915VEIS_3916VEIS_2625VEIS_3914VEIS_0963
VCHO345073 VC0395_A2855VC0395_A2854VC0395_A0475VC0395_A1864VC0395_A1863
VCHO VC0437VC0436VC0952VC2274VC2273
TTUR377629 TERTU_0962TERTU_0961TERTU_0601TERTU_0963TERTU_0600
TTEN273068 TTE0917TTE0918TTE0915TTE0921TTE1277TTE1278
TSP28240 TRQ2_0849TRQ2_0850TRQ2_1348TRQ2_0643TRQ2_0644
TSP1755 TETH514_2113TETH514_2112TETH514_2115TETH514_2110TETH514_1519TETH514_1520
TPSE340099 TETH39_1431TETH39_1429TETH39_1433TETH39_1427TETH39_1082TETH39_1083
TPET390874 TPET_0826TPET_0827TPET_1338TPET_0618TPET_0619
TMAR243274 TM_0098TM_0097TM_1456TM_0294TM_0293
TFUS269800 TFU_2171TFU_2181TFU_2170TFU_2179TFU_2175
TDEN292415 TBD_0866TBD_2441TBD_0865TBD_2440TBD_1120TBD_2442
TCRU317025 TCR_0343TCR_0484TCR_0342TCR_0485TCR_0344TCR_0482
SWOL335541 SWOL_1609SWOL_1603SWOL_1611SWOL_1608SWOL_1607
STYP99287 STM3301STM0645STM3303STM0642STM0321STM0322
STHE292459 STH432STH434STH436STH2540STH2539
SSUI391296 SSU98_0360SSU98_0781SSU98_0365SSU98_0558SSU98_0559
SSUI391295 SSU05_0369SSU05_0782SSU05_0374SSU05_0557SSU05_0558
SSP94122 SHEWANA3_3217SHEWANA3_0998SHEWANA3_3218SHEWANA3_0997SHEWANA3_0954SHEWANA3_0955
SSP644076 SCH4B_4672SCH4B_1410SCH4B_4670SCH4B_2676SCH4B_4673SCH4B_4674
SSP292414 TM1040_1203TM1040_2258TM1040_1201TM1040_2506TM1040_1204TM1040_1205
SSON300269 SSO_3331SSO_0593SSO_3333SSO_0591SSO_0284SSO_0285
SSED425104 SSED_0956SSED_3482SSED_0955SSED_3483SSED_3416SSED_3415
SRUB309807 SRU_1186SRU_2072SRU_1419SRU_1252SRU_1253
SPRO399741 SPRO_0476SPRO_1204SPRO_0474SPRO_1203SPRO_0967SPRO_0968
SPNE488221 SP70585_1153SP70585_1786SP70585_1783SP70585_0970SP70585_0971
SPNE487214 SPH_1167SPH_1856SPH_1853SPH_1040SPH_1041
SPNE487213 SPT_1122SPT_1685SPT_1682SPT_1268SPT_1267
SPNE171101 SPR0984SPR1592SPR1589SPR0832SPR0833
SPNE1313 SPJ_1017SPJ_1643SPJ_1640SPJ_0871SPJ_0872
SPEA398579 SPEA_0854SPEA_3146SPEA_0853SPEA_3147SPEA_3085SPEA_3084
SONE211586 SO_3649SO_1171SO_3651SO_1170SO_1121SO_1122
SMEL266834 SMC03775SMC03772SMC03780SMC03776SMC03777
SMED366394 SMED_3009SMED_3006SMED_3013SMED_3010SMED_3011
SLOI323850 SHEW_0871SHEW_2932SHEW_0870SHEW_2933SHEW_2848SHEW_2847
SLAC55218 SL1157_2834SL1157_0549SL1157_0879SL1157_2835SL1157_2836
SHIGELLA YHBZYBENRPMAYBEBPROBPROA
SHAL458817 SHAL_0907SHAL_3231SHAL_0906SHAL_3232SHAL_3170SHAL_3169
SGOR29390 SGO_0893SGO_0447SGO_0450SGO_1097SGO_1098
SGLO343509 SG0366SG0800SG0364SG0799SG0600SG0601
SFUM335543 SFUM_3641SFUM_3645SFUM_3640SFUM_3646SFUM_3643SFUM_3644
SFLE373384 SFV_3213SFV_0687SFV_3215SFV_0689SFV_0286SFV_0285
SFLE198214 AAN44689.1AAN42278.1AAN44691.1AAN42280.1AAN41951.1AAN41952.1
SERY405948 SACE_1428SACE_1415SACE_1432SACE_1417SACE_1424
SENT454169 SEHA_C3598SEHA_C0761SEHA_C3600SEHA_C0758SEHA_C0363SEHA_C0364
SENT321314 SCH_3239SCH_0675SCH_3241SCH_0672SCH_0322SCH_0323
SENT295319 SPA3168SPA2089SPA3170SPA2092SPA2434SPA2433
SENT220341 STY3480STY0696STY3482STY0693STY0366STY0367
SENT209261 T3218T2222T3220T2225T2529T2528
SDYS300267 SDY_3364SDY_0561SDY_3366SDY_0559SDY_0474SDY_0473
SDEN318161 SDEN_2925SDEN_0794SDEN_2926SDEN_0857SDEN_1180SDEN_0151
SDEG203122 SDE_1010SDE_3344SDE_1009SDE_3343SDE_1011SDE_3345
SBOY300268 SBO_3199SBO_0503SBO_3197SBO_0501SBO_0248SBO_0249
SBAL402882 SHEW185_1038SHEW185_3314SHEW185_1037SHEW185_3315SHEW185_3416SHEW185_3415
SBAL399599 SBAL195_1071SBAL195_3450SBAL195_1070SBAL195_3451SBAL195_3542SBAL195_3541
SALA317655 SALA_1705SALA_2042SALA_0577SALA_2219SALA_0581
SACI56780 SYN_01351SYN_02003SYN_01352SYN_01339SYN_01350SYN_02002
RSPH349102 RSPH17025_3802RSPH17025_3800RSPH17025_0156RSPH17025_3803RSPH17025_3804
RSPH349101 RSPH17029_3514RSPH17029_3512RSPH17029_2525RSPH17029_3515RSPH17029_3516
RSPH272943 RSP_3822RSP_3820RSP_0865RSP_3823RSP_3824
RSP357808 ROSERS_3577ROSERS_2217ROSERS_3248ROSERS_0762ROSERS_0763
RSOL267608 RSC2820RSC2193RSC2821RSC2194RSC2819RSC2741
RRUB269796 RRU_A1240RRU_A1241RRU_A1236RRU_A1239RRU_A1238
RPOM246200 SPO_1986SPO_1989SPO_0219SPO_1985SPO_1984
RPAL316058 RPB_0251RPB_0247RPB_0255RPB_0252RPB_0253
RPAL316057 RPD_0584RPD_0588RPD_0569RPD_0574RPD_0571
RPAL316056 RPC_0157RPC_0154RPC_0163RPC_0158RPC_0161
RPAL258594 RPA0162RPA0159RPA0166RPA0163RPA0164
RMET266264 RMET_3104RMET_0782RMET_3105RMET_0781RMET_3103RMET_2970
RFER338969 RFER_1270RFER_2078RFER_1269RFER_2079RFER_1271RFER_0761
REUT381666 H16_A3250H16_A0913H16_A3251H16_A0912H16_A3249H16_A3136
REUT264198 REUT_A2956REUT_A2525REUT_A2957REUT_A2526REUT_A2955REUT_A2831
RDEN375451 RD1_2660RD1_2663RD1_0620RD1_2659RD1_2658
RCAS383372 RCAS_4265RCAS_3366RCAS_2002RCAS_3737RCAS_4446RCAS_4447
PTHE370438 PTH_0833PTH_0835PTH_0831PTH_0837PTH_0834PTH_2594
PSYR223283 PSPTO_0799PSPTO_4828PSPTO_0798PSPTO_4827PSPTO_0800PSPTO_4829
PSYR205918 PSYR_0703PSYR_4368PSYR_0702PSYR_4367PSYR_0704PSYR_4369
PSTU379731 PST_0958PST_3784PST_0957PST_3783PST_0959PST_3785
PSP56811 PSYCPRWF_1601PSYCPRWF_0344PSYCPRWF_0892PSYCPRWF_0343PSYCPRWF_1600PSYCPRWF_2079
PSP312153 PNUC_0196PNUC_0615PNUC_0195PNUC_0614PNUC_0197PNUC_0235
PSP296591 BPRO_0837BPRO_1971BPRO_0838BPRO_1972BPRO_0836BPRO_4584
PSP117 RB2630RB8455RB6770RB5749RB12013RB7359
PPUT76869 PPUTGB1_0722PPUTGB1_4863PPUTGB1_0721PPUTGB1_4862PPUTGB1_0723PPUTGB1_4864
PPUT351746 PPUT_0722PPUT_4685PPUT_0721PPUT_4684PPUT_0723PPUT_4686
PPUT160488 PP_0690PP_4810PP_0689PP_4809PP_0691PP_4811
PPRO298386 PBPRA0397PBPRA0395PBPRA2888PBPRA0839PBPRA0840
PNAP365044 PNAP_0749PNAP_0750PNAP_1732PNAP_0748PNAP_3751
PMUL272843 PM0351PM0348PM1922PM1896PM0936
PMEN399739 PMEN_3680PMEN_3801PMEN_3681PMEN_3800PMEN_3679PMEN_3802
PLUT319225 PLUT_0165PLUT_2093PLUT_0097PLUT_1477PLUT_1479
PLUM243265 PLU4540PLU1300PLU4541PLU1299PLU1243PLU1244
PING357804 PING_0527PING_1188PING_0526PING_1137PING_2953PING_2952
PHAL326442 PSHAA2654PSHAA1028PSHAA2655PSHAA1027PSHAA0633PSHAA0280
PFLU220664 PFL_5327PFL_5455PFL_5328PFL_5454PFL_5326PFL_5456
PFLU216595 PFLU5169PFLU5426PFLU5170PFLU5425PFLU5168PFLU5427
PFLU205922 PFL_4858PFL_4973PFL_4859PFL_4972PFL_4857PFL_4974
PENT384676 PSEEN0828PSEEN4829PSEEN0826PSEEN4828PSEEN0829PSEEN4830
PCRY335284 PCRYO_1683PCRYO_1754PCRYO_0214PCRYO_1682PCRYO_0322
PCAR338963 PCAR_2581PCAR_2578PCAR_2582PCAR_2577PCAR_2580PCAR_2579
PATL342610 PATL_3736PATL_1563PATL_3737PATL_1562PATL_4269PATL_4268
PARC259536 PSYC_1504PSYC_0195PSYC_1572PSYC_0194PSYC_1503PSYC_0293
PAER208964 PA4566PA4006PA4567PA4005PA4565PA4007
PAER208963 PA14_60445PA14_12020PA14_60450PA14_12030PA14_60420PA14_12010
OIHE221109 OB2042OB1985OB1983OB1052OB1053
OANT439375 OANT_1054OANT_1051OANT_1058OANT_1055OANT_1056
NWIN323098 NWI_0442NWI_0440NWI_0446NWI_0443NWI_0444
NSP103690 ALR3739ALL5063ASL0146ALR3103ALL2166
NOCE323261 NOC_3035NOC_2661NOC_3034NOC_2660NOC_3036NOC_2662
NMUL323848 NMUL_A1817NMUL_A0360NMUL_A1816NMUL_A0361NMUL_A1843NMUL_A0514
NMEN374833 NMCC_0100NMCC_0175NMCC_1819NMCC_0176NMCC_0987NMCC_0986
NMEN272831 NMC2065NMC2003NMC1848NMC2002NMC1033NMC1032
NMEN122587 NMA0345NMA0416NMA2163NMA0417NMA1268NMA1267
NMEN122586 NMB_2086NMB_2024NMB_0324NMB_2023NMB_1069NMB_1068
NHAM323097 NHAM_0517NHAM_0515NHAM_0522NHAM_0518NHAM_0520
NGON242231 NGO1990NGO2080NGO1677NGO2081NGO0850
NFAR247156 NFA13760NFA13540NFA13770NFA13560NFA13710
NEUT335283 NEUT_0957NEUT_1610NEUT_0956NEUT_1611NEUT_0958NEUT_2104
NEUR228410 NE1291NE0359NE1292NE0358NE1290NE2158
NARO279238 SARO_1145SARO_0930SARO_0058SARO_1146SARO_0060
MVAN350058 MVAN_3926MVAN_3945MVAN_3925MVAN_3943MVAN_3934
MTUB419947 MRA_2447MRA_2467MRA_2446MRA_2465MRA_2453
MTUB336982 TBFG_12449TBFG_12468TBFG_12448TBFG_12466TBFG_12455
MTHE264732 MOTH_0561MOTH_0564MOTH_0559MOTH_0567MOTH_0562MOTH_0563
MTBRV RV2421CRV2441CRV2420CRV2439CRV2427C
MTBCDC MT2494MT2517MT2493MT2515MT2500
MSUC221988 MS1594MS1598MS1834MS1862MS1604
MSP409 M446_4213M446_4211M446_4220M446_4216M446_4218
MSP400668 MMWYL1_4236MMWYL1_2851MMWYL1_4237MMWYL1_2850MMWYL1_4235MMWYL1_2852
MSP266779 MESO_3458MESO_3460MESO_3454MESO_3457MESO_3456
MSME246196 MSMEG_4581MSMEG_4624MSMEG_4580MSMEG_4621MSMEG_4584
MPET420662 MPE_A0513MPE_A1340MPE_A0512MPE_A1341MPE_A0514MPE_A0269
MMAR394221 MMAR10_2789MMAR10_2785MMAR10_2793MMAR10_2790MMAR10_2669
MLOT266835 MLL4013MSL4017MLL4005MLL4011MLL4009
MGIL350054 MFLV_2653MFLV_2636MFLV_2654MFLV_2638MFLV_2644
MFLA265072 MFLA_2217MFLA_2159MFLA_2218MFLA_0593MFLA_2216MFLA_2158
MEXT419610 MEXT_4410MEXT_2869MEXT_4413MEXT_2870MEXT_2867MEXT_2868
MCAP243233 MCA_2248MCA_1879MCA_2247MCA_2027MCA_2249MCA_1880
MBOV410289 BCG_2437CBCG_2461CBCG_2436CBCG_2459CBCG_2444C
MBOV233413 MB2444CMB2468CMB2443CMB2466CMB2451C
MAVI243243 MAV_1750MAV_1730MAV_1751MAV_1732MAV_1747
MAQU351348 MAQU_0857MAQU_2416MAQU_0856MAQU_2415MAQU_0858MAQU_2417
LWEL386043 LWE1550LWE1501LWE1553LWE1499LWE1279LWE1278
LPLA220668 LP_2094LP_1530LP_1532LP_0016LP_0017
LMON265669 LMOF2365_1556LMOF2365_1507LMOF2365_1559LMOF2365_1505LMOF2365_1277LMOF2365_1276
LMON169963 LMO1537LMO1488LMO1540LMO1486LMO1260LMO1259
LMES203120 LEUM_0521LEUM_1738LEUM_1736LEUM_0294LEUM_0295
LLAC272623 L106374L0421L28204L0117L0116
LLAC272622 LACR_1200LACR_1182LACR_0234LACR_1717LACR_1716
LINN272626 LIN1572LIN1523LIN1575LIN1521LIN1228LIN1227
LCHO395495 LCHO_3275LCHO_1950LCHO_3276LCHO_1949LCHO_3274LCHO_4007
LCAS321967 LSEI_1350LSEI_1688LSEI_1686LSEI_2358LSEI_2357
KPNE272620 GKPORF_B2928GKPORF_B5095GKPORF_B2930GKPORF_B5093GKPORF_B4603GKPORF_B4602
JSP375286 MMA_2992MMA_0541MMA_2993MMA_0540MMA_2991MMA_2899
JSP290400 JANN_2283JANN_2281JANN_0377JANN_2284JANN_2285
ILOI283942 IL0477IL0950IL0476IL0951IL1985IL1986
HSOM228400 HSM_0121HSM_0119HSM_0195HSM_0060HSM_0733
HSOM205914 HS_0248HS_0246HS_0323HS_0192HS_0408
HMOD498761 HM1_2705HM1_2701HM1_2709HM1_2698HM1_2703HM1_2702
HINF71421 HI_0877HI_0879HI_0034HI_0900HI_1239
HINF374930 CGSHIEE_07645CGSHIEE_07635CGSHIEE_03140CGSHIEE_07510CGSHIEE_03940
HINF281310 NTHI1040NTHI1042NTHI0042NTHI1066NTHI1926
HHAL349124 HHAL_1846HHAL_2141HHAL_1847HHAL_2140HHAL_1845HHAL_2142
HCHE349521 HCH_05939HCH_05846HCH_05940HCH_05845HCH_05938HCH_05847
HAUR316274 HAUR_4227HAUR_2310HAUR_2299HAUR_3206HAUR_3208
HARS204773 HEAR2785HEAR0555HEAR2786HEAR0554HEAR2784HEAR2664
GVIO251221 GLR4375GLR4016GSL0824GLL0069GLL3923
GURA351605 GURA_0306GURA_4130GURA_0305GURA_4129GURA_4132GURA_4131
GTHE420246 GTNG_2536GTNG_2458GTNG_2456GTNG_1932GTNG_1933
GSUL243231 GSU_3213GSU_3210GSU_3235GSU_3209GSU_3212GSU_3211
GOXY290633 GOX0141GOX0140GOX1149GOX0142GOX1147
GMET269799 GMET_3197GMET_3200GMET_3196GMET_3201GMET_3198GMET_3199
GKAU235909 GK2606GK2522GK2520GK2048GK2049
FPHI484022 FPHI_0892FPHI_0145FPHI_1671FPHI_0609FPHI_0608
ESP42895 ENT638_3619ENT638_1173ENT638_3621ENT638_1172ENT638_0768ENT638_0769
ELIT314225 ELI_01855ELI_02815ELI_13230ELI_01860ELI_07240
EFER585054 EFER_3160EFER_2467EFER_3162EFER_2468EFER_2736EFER_2735
EFAE226185 EF_1527EF_2871EF_0970EF_0038EF_0037
ECOO157 YHBZYBENRPMAYBEBPROBPROA
ECOL83334 ECS4062ECS0677ECS4064ECS0675ECS0269ECS0270
ECOL585397 ECED1_3841ECED1_0636ECED1_3843ECED1_0634ECED1_0276ECED1_0277
ECOL585057 ECIAI39_3678ECIAI39_0614ECIAI39_3680ECIAI39_0612ECIAI39_0409ECIAI39_0408
ECOL585056 ECUMN_3663ECUMN_0733ECUMN_3665ECUMN_0731ECUMN_0308ECUMN_0309
ECOL585055 EC55989_3601EC55989_0631EC55989_3603EC55989_0629EC55989_0266EC55989_0267
ECOL585035 ECS88_3565ECS88_0681ECS88_3567ECS88_0679ECS88_0277ECS88_0278
ECOL585034 ECIAI1_3331ECIAI1_0623ECIAI1_3333ECIAI1_0621ECIAI1_0281ECIAI1_0282
ECOL481805 ECOLC_0517ECOLC_3006ECOLC_0515ECOLC_3008ECOLC_3339ECOLC_3338
ECOL469008 ECBD_0559ECBD_3012ECBD_0557ECBD_3014ECBD_3377ECBD_3376
ECOL439855 ECSMS35_3479ECSMS35_0659ECSMS35_3481ECSMS35_0657ECSMS35_0296ECSMS35_0297
ECOL413997 ECB_03048ECB_00608ECB_03050ECB_00606ECB_00239ECB_00240
ECOL409438 ECSE_3467ECSE_0708ECSE_3469ECSE_0705ECSE_0262ECSE_0263
ECOL364106 UTI89_C3616UTI89_C0642UTI89_C3618UTI89_C0639UTI89_C0283UTI89_C0284
ECOL362663 ECP_3270ECP_0669ECP_3272ECP_0667ECP_0271ECP_0272
ECOL331111 ECE24377A_3668ECE24377A_0665ECE24377A_3670ECE24377A_0663ECE24377A_0274ECE24377A_0275
ECOL316407 ECK3172:JW3150:B3183ECK0632:JW0634:B0639ECK3174:JW3152:B3185ECK0630:JW5090:B0637ECK0243:JW0232:B0242ECK0244:JW0233:B0243
ECOL199310 C3940C0730C3942C0728C0389C0390
ECAR218491 ECA0693ECA1306ECA0691ECA1305ECA3463ECA3462
DVUL882 DVU_0929DVU_1954DVU_0928DVU_1618DVU_0930DVU_1953
DSHI398580 DSHI_1466DSHI_1461DSHI_0087DSHI_1467DSHI_1469
DRED349161 DRED_2532DRED_2519DRED_2534DRED_2516DRED_1170DRED_1169
DPSY177439 DP2590DP2587DP2591DP2618DP2589DP2588
DOLE96561 DOLE_0088DOLE_0091DOLE_0087DOLE_0092DOLE_0089DOLE_0090
DHAF138119 DSY3163DSY3161DSY3165DSY3159DSY1386DSY1387
DDES207559 DDE_1632DDE_2691DDE_1756DDE_2689DDE_1633
DARO159087 DARO_3472DARO_0169DARO_3471DARO_0170DARO_3473DARO_0540
CVIO243365 CV_0850CV_0519CV_0849CV_0518CV_4212CV_4289
CVES412965 COSY_0381COSY_0307COSY_0824COSY_0382COSY_0135
CTEP194439 CT_2213CT_0016CT_0140CT_1457CT_1473
CSAL290398 CSAL_0476CSAL_1542CSAL_0475CSAL_1543CSAL_0477CSAL_1541
CRUT413404 RMAG_0412RMAG_0327RMAG_0918RMAG_0326RMAG_0413RMAG_0133
CPSY167879 CPS_4510CPS_1718CPS_4511CPS_1717CPS_4832CPS_4833
CPER289380 CPR_2094CPR_2092CPR_2095CPR_2583CPR_2582
CPER195103 CPF_2382CPF_2380CPF_2383CPF_2904CPF_2903
CPER195102 CPE2127CPE2125CPE2128CPE2579CPE2578
CJEI306537 JK0567JK0558JK0568JK0563JK0565
CJAP155077 CJA_0460CJA_0786CJA_0459CJA_0787CJA_0461CJA_0785
CHYD246194 CHY_0370CHY_0388CHY_0368CHY_0391CHY_0380CHY_0383
CDES477974 DAUD_1873DAUD_1868DAUD_1451DAUD_1866DAUD_1872DAUD_1870
CCHL340177 CAG_1871CAG_0863CAG_0087CAG_1096CAG_1102
CBOT508765 CLL_A0581CLL_A0583CLL_A0580CLL_A0062CLL_A0063
CBEI290402 CBEI_0511CBEI_0513CBEI_0510CBEI_0024CBEI_0025
CAULO CC0315CC0318CC3432CC0314CC3430
CACE272562 CAC1260CAC1262CAC1259CAC3253CAC3254
BWEI315730 BCERKBAB4_4286BCERKBAB4_4183BCERKBAB4_4181BCERKBAB4_2790BCERKBAB4_2789
BVIE269482 BCEP1808_0559BCEP1808_2382BCEP1808_0558BCEP1808_2383BCEP1808_0560BCEP1808_0625
BTRI382640 BT_0172BT_0152BT_0176BT_0173BT_0174
BTHU412694 BALH_4023BALH_3920BALH_3918BALH_2679BALH_2678
BTHU281309 BT9727_4174BT9727_4068BT9727_4066BT9727_2731BT9727_2730
BTHE226186 BT_2011BT_4313BT_4008BT_3719BT_3718
BTHA271848 BTH_I1142BTH_I1012BTH_I1141BTH_I1011BTH_I1143BTH_I1214
BSUI470137 BSUIS_B1323BSUIS_B1326BSUIS_B1319BSUIS_B1322BSUIS_B1321
BSUI204722 BR_1845BR_1842BR_1849BR_1841BR_1844BR_1843
BSUB BSU27920BSU25640BSU25620BSU13120BSU13130
BSP376 BRADO0432BRADO0435BRADO0428BRADO0431BRADO0430
BSP36773 BCEP18194_A3668BCEP18194_A5624BCEP18194_A3667BCEP18194_A5625BCEP18194_A3669BCEP18194_A3743
BPUM315750 BPUM_2432BPUM_2298BPUM_2296BPUM_1207BPUM_1822
BPSE320373 BURPS668_3487BURPS668_1228BURPS668_3489BURPS668_1227BURPS668_3486BURPS668_3412
BPSE320372 BURPS1710B_A3801BURPS1710B_A1456BURPS1710B_A3803BURPS1710B_A1455BURPS1710B_A3800BURPS1710B_A3725
BPSE272560 BPSL3003BPSL1162BPSL3004BPSL1161BPSL3002BPSL2935
BPET94624 BPET4679BPET3102BPET4678BPET3103BPET4680BPET3327
BPER257313 BP0747BP2311BP0748BP2312BP0746BP2041
BPAR257311 BPP0309BPP2419BPP0310BPP2418BPP0308BPP1728
BOVI236 GBOORF1853GBOORF1856GBOORF1849GBOORF1852GBOORF1851
BMEL359391 BAB1_1853BAB1_1857BAB1_1849BAB1_1852BAB1_1851
BMAL320389 BMA10247_3260BMA10247_0355BMA10247_3259BMA10247_0354BMA10247_3261BMA10247_2637
BMAL320388 BMASAVP1_A0444BMASAVP1_A1072BMASAVP1_A0445BMASAVP1_A1071BMASAVP1_A0443BMASAVP1_A0367
BMAL243160 BMA_2521BMA_1887BMA_2522BMA_1888BMA_2520BMA_2450
BLON206672 BL1032BL1283BL0965BL1285BL1034
BLIC279010 BL01159BL02081BL02083BL03752BL03751
BJAP224911 BLR0425BSR0421BSR0431BLR0428BLR0429
BHEN283166 BH01560BH01400BH01600BH01570BH01580
BHAL272558 BH1213BH1326BH1328BH1505BH1504
BFRA295405 BF3708BF1009BF0775BF0499BF0498
BFRA272559 BF3501BF0929BF0703BF0444BF0443
BCLA66692 ABC1542ABC1640ABC1642ABC1767ABC1766
BCER572264 BCA_4552BCA_4443BCA_4441BCA_3064BCA_3063
BCER405917 BCE_4532BCE_4413BCE_4411BCE_3029BCE_3028
BCER288681 BCE33L4185BCE33L4078BCE33L4076BCE33L2712BCE33L2711
BCEN331272 BCEN2424_0583BCEN2424_2297BCEN2424_0582BCEN2424_2298BCEN2424_0584BCEN2424_0657
BCEN331271 BCEN_0101BCEN_1685BCEN_0100BCEN_1686BCEN_0102BCEN_0174
BCAN483179 BCAN_A1883BCAN_A1887BCAN_A1879BCAN_A1882BCAN_A1881
BBRO257310 BB0312BB1868BB0313BB1867BB0311BB3380
BBAC360095 BARBAKC583_0317BARBAKC583_0310BARBAKC583_0321BARBAKC583_0318BARBAKC583_0319
BANT592021 BAA_4690BAA_4577BAA_4575BAA_3047BAA_3046
BANT568206 BAMEG_4707BAMEG_4595BAMEG_4593BAMEG_1611BAMEG_1612
BANT261594 GBAA4672GBAA4558GBAA4556GBAA2993GBAA2992
BANT260799 BAS4338BAS4230BAS4228BAS2782BAS2781
BAMY326423 RBAM_024970RBAM_023940RBAM_023920RBAM_012930RBAM_012940
BAMB398577 BAMMC406_0511BAMMC406_2214BAMMC406_0510BAMMC406_2215BAMMC406_0512BAMMC406_0578
BAMB339670 BAMB_0486BAMB_2335BAMB_0485BAMB_2336BAMB_0487BAMB_0552
BABO262698 BRUAB1_1824BRUAB1_1828BRUAB1_1820BRUAB1_1823BRUAB1_1822
AVAR240292 AVA_1586AVA_2319AVA_1515AVA_3807AVA_0057
ASP76114 EBA843EBA3972EBC2EBA3971EBA844EBA4380
ASP62977 ACIAD2561ACIAD2938ACIAD3076ACIAD2560ACIAD0547
ASP62928 AZO3169AZO3607AZO3168AZO3608AZO3170AZO3218
ASP232721 AJS_0843AJS_0842AJS_1901AJS_0844AJS_3913
ASAL382245 ASA_3361ASA_1065ASA_3362ASA_1064ASA_0893ASA_0894
APLE434271 APJL_0041APJL_2048APJL_1634APJL_0896APJL_1998
APLE416269 APL_0040APL_2000APL_1601APL_0884APL_1951
AORE350688 CLOS_1750CLOS_1748CLOS_1751CLOS_0128CLOS_0127
ANAE240017 ANA_0482ANA_0464ANA_0484ANA_0466ANA_0467
AMET293826 AMET_2307AMET_2309AMET_2305AMET_2313AMET_3645AMET_3646
AHYD196024 AHA_0932AHA_3251AHA_0931AHA_3252AHA_3421AHA_3420
AFER243159 AFE_2745AFE_0161AFE_2744AFE_0160AFE_2746AFE_2583
AEHR187272 MLG_0847MLG_0404MLG_0846MLG_0405MLG_0848MLG_0403
ADEH290397 ADEH_4180ADEH_2409ADEH_0213ADEH_0211ADEH_0212
ACAU438753 AZC_4141AZC_4093AZC_4136AZC_4139AZC_4138
ABOR393595 ABO_0454ABO_1952ABO_0453ABO_1953ABO_0455ABO_1951
ABAU360910 BAV0257BAV2210BAV0258BAV2211BAV0256BAV2495
ABAC204669 ACID345_0020ACID345_0021ACID345_0019ACID345_0022ACID345_1268
AAVE397945 AAVE_3673AAVE_3674AAVE_3200AAVE_3672AAVE_4545
AAEO224324 AQ_2069AQ_036AQ_1773AAQ_1272AQ_1134AQ_1071


Organism features enriched in list (features available for 297 out of the 317 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Endospores:No 4.456e-1268211
GC_Content_Range4:0-40 6.260e-2945213
GC_Content_Range4:40-60 9.098e-9147224
GC_Content_Range4:60-100 9.369e-10105145
GC_Content_Range7:0-30 1.471e-9547
GC_Content_Range7:30-40 7.614e-1740166
GC_Content_Range7:50-60 1.869e-880107
GC_Content_Range7:60-70 9.450e-12102134
Genome_Size_Range5:0-2 2.917e-4012155
Genome_Size_Range5:4-6 1.233e-27153184
Genome_Size_Range5:6-10 0.00037563547
Genome_Size_Range9:0-1 7.132e-8127
Genome_Size_Range9:1-2 2.296e-3011128
Genome_Size_Range9:2-3 0.009527951120
Genome_Size_Range9:4-5 8.913e-117796
Genome_Size_Range9:5-6 4.680e-147688
Genome_Size_Range9:6-8 9.376e-63238
Gram_Stain:Gram_Neg 2.018e-12211333
Gram_Stain:Gram_Pos 0.001063361150
Habitat:Host-associated 1.226e-678206
Habitat:Multiple 8.830e-7117178
Habitat:Specialized 0.00813191953
Motility:No 5.777e-849151
Motility:Yes 9.726e-10172267
Optimal_temp.:25-30 0.00036261719
Optimal_temp.:30-37 0.0021976318
Optimal_temp.:35-37 0.00178011213
Oxygen_Req:Anaerobic 0.000842038102
Oxygen_Req:Facultative 6.747e-6127201
Shape:Coccus 0.00001072482
Shape:Rod 1.823e-23235347
Shape:Sphere 0.0002022219
Shape:Spiral 8.880e-7434
Temp._range:Hyperthermophilic 0.0027164523
Temp._range:Psychrophilic 0.002175699



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 98
Effective number of orgs (counting one per cluster within 468 clusters): 84

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 131
UURE95664 Ureaplasma urealyticum serovar 101
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/271
TWHI203267 ncbi Tropheryma whipplei Twist1
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington1
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 531
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP1
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-21
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2321
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
FMAG334413 ncbi Finegoldia magna ATCC 293281
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake1
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CCON360104 ncbi Campylobacter concisus 138261
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
AMAR234826 ncbi Anaplasma marginale St. Maries1
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040


Names of the homologs of the genes in the group in each of these orgs
  G7656   G6350   EG50002   EG11255   EG10768   EG10767   
UURE95667 UU469
UURE95664 UUR10_0526
UPAR505682
UMET351160
TWHI218496 TW0277
TWHI203267 TW469
TVOL273116
TPEN368408
TKOD69014
TACI273075
STOK273063
SSOL273057
SSAP342451 SSP1166
SMAR399550
SACI330779
RTYP257363 RT0831
RPRO272947 RP843
PTOR263820
PISL384616
PINT246198
PHOR70601
PGIN242619 PG_0058
PFUR186497
PAST100379
PARS340102
PAER178306
PABY272844
NPHA348780 NP3976A
MTHE349307
MTHE187420
MSYN262723 MS53_0319
MSTA339860
MSED399549
MPUL272635 MYPU_3350
MPNE272634
MPEN272633 MYPE5200
MMYC272632
MMOB267748 MMOB2760
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLAB410358
MKAN190192
MJAN243232
MHYO295358 MHP474
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311 MFL373
MCAP340047
MART243272
MAEO419665
IHOS453591
HWAL362976 HQ1845A
HSP64091
HSAL478009
HPYL357544 HPAG1_0299
HPY HP0297
HMUK485914 HMUK_3393
HMAR272569
HBUT415426
FMAG334413 FMG_0369
FJOH376686 FJOH_0744
ERUM302409 ERGA_CDS_04940
ERUM254945 ERWE_CDS_05040
ECHA205920 ECH_0546
ECAN269484 ECAJ_0487
CTRA471473 CTLON_0138
CTRA471472 CTL0138
CSUL444179
CPRO264201 PC1239
CPNE182082 CPB0947
CPNE138677 CPJ0915
CPNE115713 CPN0915
CPNE115711 CP_0951
CMUR243161 TC_0150
CMET456442
CMAQ397948
CKOR374847
CJEJ407148 C8J_0088
CJEJ360109 JJD26997_0099
CJEJ354242 CJJ81176_0130
CJEJ195099 CJE_0090
CJEJ192222 CJ0095
CFEL264202 CF0162
CCON360104 CCC13826_0996
CCAV227941 CCA_00854
CABO218497 CAB819
BXEN266265
AYEL322098
AURANTIMONAS
APER272557
AMAR234826 AM980
ALAI441768
AFUL224325


Organism features enriched in list (features available for 93 out of the 98 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.00048517112
Arrangment:Singles 0.009572855286
Disease:Pharyngitis 3.229e-788
Disease:bronchitis_and_pneumonitis 3.229e-788
Endospores:No 1.378e-858211
GC_Content_Range4:0-40 0.000041351213
GC_Content_Range4:60-100 0.00001298145
GC_Content_Range7:0-30 3.648e-62047
GC_Content_Range7:60-70 0.00006978134
Genome_Size_Range5:0-2 2.973e-2568155
Genome_Size_Range5:2-4 0.007232322197
Genome_Size_Range5:4-6 5.430e-161184
Genome_Size_Range5:6-10 0.0091366247
Genome_Size_Range9:0-1 1.473e-81727
Genome_Size_Range9:1-2 1.261e-1451128
Genome_Size_Range9:3-4 0.0017105477
Genome_Size_Range9:4-5 2.370e-7196
Genome_Size_Range9:6-8 0.0083156138
Gram_Stain:Gram_Pos 5.446e-94150
Habitat:Host-associated 0.009408842206
Habitat:Multiple 2.049e-79178
Habitat:Specialized 0.00003132053
Optimal_temp.:- 0.006720431257
Optimal_temp.:100 0.003949533
Optimal_temp.:37 0.000889828106
Optimal_temp.:85 0.000612944
Oxygen_Req:Aerobic 0.003357819185
Oxygen_Req:Anaerobic 0.000182029102
Oxygen_Req:Facultative 0.001326720201
Pathogenic_in:Ruminant 0.003949533
Salinity:Extreme_halophilic 0.001421357
Shape:Irregular_coccus 4.165e-71217
Shape:Pleomorphic 0.000289568
Shape:Rod 2.982e-1028347
Shape:Sphere 3.441e-111619
Temp._range:Hyperthermophilic 3.165e-101723
Temp._range:Mesophilic 0.000015960473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 1
Effective number of orgs (counting one per cluster within 468 clusters): 1

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00693507556


Names of the homologs of the genes in the group in each of these orgs
  G7656   G6350   EG50002   EG11255   EG10768   EG10767   
CRUT413404 RMAG_0412RMAG_0327RMAG_0918RMAG_0326RMAG_0413RMAG_0133


Organism features enriched in list (features available for 1 out of the 1 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951770.5385
PROSYN-PWY (proline biosynthesis I)4753130.5380
GLYCOCAT-PWY (glycogen degradation I)2462040.5178
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4583040.5163
METSYN-PWY (homoserine and methionine biosynthesis)3972750.4875
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652600.4842
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491400.4831
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392470.4803
MET-SAM-PWY (superpathway of S-adenosyl-L-methionine biosynthesis)3922710.4755
PWY-4041 (γ-glutamyl cycle)2792140.4651
PWY-5340 (sulfate activation for sulfonation)3852660.4632
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222820.4621
HOMOSER-METSYN-PWY (methionine biosynthesis I)4192800.4570
PWY-6317 (galactose degradation I (Leloir pathway))4642980.4559
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251820.4513
THISYN-PWY (thiamin biosynthesis I)5023100.4429
PWY-5386 (methylglyoxal degradation I)3052240.4419
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491940.4412
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491940.4412
VALDEG-PWY (valine degradation I)2902160.4405
PWY-5148 (acyl-CoA hydrolysis)2271810.4370
GLUCONSUPER-PWY (D-gluconate degradation)2291820.4360
DAPLYSINESYN-PWY (lysine biosynthesis I)3422410.4322
CYSTSYN-PWY (cysteine biosynthesis I)5043090.4292
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3112250.4287
ILEUSYN-PWY (isoleucine biosynthesis I (from threonine))5053090.4264
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002190.4264
PWY-5918 (heme biosynthesis I)2722040.4247
ARO-PWY (chorismate biosynthesis I)5103100.4208
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3002180.4199
TYRFUMCAT-PWY (tyrosine degradation I)1841530.4179
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181730.4179
ARGSYNBSUB-PWY (arginine biosynthesis II (acetyl cycle))3832580.4164
PWY0-862 (cis-dodecenoyl biosynthesis)3432380.4097
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862090.4090
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831510.4080
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162710.4044



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6350   EG50002   EG11255   EG10768   EG10767   
G76560.9986230.9999590.9987120.999830.998871
G63500.9991210.999960.9988080.999571
EG500020.9986330.9997790.999157
EG112550.9992020.999587
EG107680.999955
EG10767



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PAIRWISE BLAST SCORES:

  G7656   G6350   EG50002   EG11255   EG10768   EG10767   
G76560.0f0-----
G6350-0.0f0----
EG50002--0.0f0---
EG11255---0.0f0--
EG10768----0.0f0-
EG10767-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- PROLINEMULTI-CPLX (γ-glutamyl kinase-GP-reductase multienzyme complex) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.333, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9995 0.9989 EG10767 (proA) GLUTSEMIALDEHYDROG-MONOMER (ProA)
   *in cand* 0.9996 0.9988 EG10768 (proB) GLUTKIN-MONOMER (ProB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9986 EG11255 (ybeB) EG11255-MONOMER (predicted protein)
   *in cand* 0.9994 0.9986 EG50002 (rpmA) EG50002-MONOMER (50S ribosomal subunit protein L27)
   *in cand* 0.9993 0.9986 G6350 (nadD) NICONUCADENYLYLTRAN-MONOMER (nicotinate-mononucleotide adenylyltransferase)
   *in cand* 0.9993 0.9986 G7656 (obgE) G7656-MONOMER (GTPase involved in chromosome partitioning and ribosome assembly)

- PROSYN-PWY (proline biosynthesis I) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.333, average score: 0.999)
  Genes in pathway or complex:
             0.9082 0.7609 EG10769 (proC) PYRROLINECARBREDUCT-MONOMER (pyrroline-5-carboxylate reductase monomer)
   *in cand* 0.9995 0.9989 EG10767 (proA) GLUTSEMIALDEHYDROG-MONOMER (ProA)
   *in cand* 0.9996 0.9988 EG10768 (proB) GLUTKIN-MONOMER (ProB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9986 EG11255 (ybeB) EG11255-MONOMER (predicted protein)
   *in cand* 0.9994 0.9986 EG50002 (rpmA) EG50002-MONOMER (50S ribosomal subunit protein L27)
   *in cand* 0.9993 0.9986 G6350 (nadD) NICONUCADENYLYLTRAN-MONOMER (nicotinate-mononucleotide adenylyltransferase)
   *in cand* 0.9993 0.9986 G7656 (obgE) G7656-MONOMER (GTPase involved in chromosome partitioning and ribosome assembly)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10767 EG10768 (centered at EG10767)
EG11255 (centered at EG11255)
EG50002 (centered at EG50002)
G6350 (centered at G6350)
G7656 (centered at G7656)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7656   G6350   EG50002   EG11255   EG10768   EG10767   
418/623400/623420/623406/623400/623406/623
AAEO224324:0:Tyes144701239879776733
AAUR290340:2:Tyes-0--32
AAVE397945:0:Tyes459-46004581320
ABAC204669:0:Tyes1203-1259
ABAU360910:0:Tyes119572195802247
ABOR393595:0:Tyes115280152921527
ABUT367737:0:Tyes--0--147
ACAU438753:0:Tyes49-0444746
ACEL351607:0:Tyes-3--02
ACRY349163:8:Tyes1-0-2-
ADEH290397:0:Tyes40062216-201
AEHR187272:0:Tyes444144324450
AFER243159:0:Tyes254512544025462384
AHYD196024:0:Tyes122640226524322431
AMAR234826:0:Tyes---0--
AMAR329726:9:Tyes0-1807-2848-
AMET293826:0:Tyes240813141315
ANAE240017:0:Tyes-1701923
AORE350688:0:Tyes161316111614-10
APHA212042:0:Tyes--4630--
APLE416269:0:Tyes0-200615998511959
APLE434271:0:Tno0-202816028271979
ASAL382245:5:Tyes2364162236516101
ASP1667:3:Tyes-2-054
ASP232721:2:Tyes1-0101722992
ASP62928:0:Tyes14480449254
ASP62977:0:Tyes1892-2232236018910
ASP76114:2:Tyes118330183222074
AVAR240292:3:Tyes153922721468-37640
BABO262698:1:Tno4-8032
BAFZ390236:2:Fyes-30---
BAMB339670:3:Tno1189901900267
BAMB398577:3:Tno1172901730268
BAMY326423:0:Tyes12031100-109801
BANT260799:0:Tno15461439-143710
BANT261594:2:Tno15521446-144410
BANT568206:2:Tyes30182906-290401
BANT592021:2:Tno16261513-151110
BAPH198804:0:Tyes1520---
BAPH372461:0:Tyes1-0---
BBAC264462:0:Tyes-02---
BBAC360095:0:Tyes7-01189
BBRO257310:0:Tyes115772157603091
BBUR224326:21:Fno-20---
BCAN483179:1:Tno4-8032
BCEN331271:2:Tno1160801609274
BCEN331272:3:Tyes1171201713274
BCER226900:1:Tyes14261321-13190-
BCER288681:0:Tno14671360-135810
BCER315749:1:Tyes962-0--
BCER405917:1:Tyes14361321-131910
BCER572264:1:Tno14661357-135510
BCIC186490:0:Tyes3800381---
BCLA66692:0:Tyes098-100230229
BFRA272559:1:Tyes-299046824910
BFRA295405:0:Tno-325652228610
BGAR290434:2:Fyes-20---
BHAL272558:0:Tyes0113-115296295
BHEN283166:0:Tyes16-0201718
BHER314723:0:Fyes-20---
BJAP224911:0:Fyes4-01078
BLIC279010:0:Tyes14621304-130201
BLON206672:0:Tyes-64324032666
BMAL243160:1:Tno58105821580513
BMAL320388:1:Tno7569276691740
BMAL320389:1:Tyes284312842028442233
BMEL224914:1:Tno0--412
BMEL359391:1:Tno4-8032
BOVI236:1:Tyes4-7032
BPAR257311:0:Tno120222202101356
BPER257313:0:Tyes114062140701162
BPET94624:0:Tyes16040160311605233
BPSE272560:1:Tyes185711858018561789
BPSE320372:1:Tno222512227022242149
BPSE320373:1:Tno217312175021722098
BPUM315750:0:Tyes12071079-10770602
BQUI283165:0:Tyes10-0-1112
BSP107806:2:Tyes1580---
BSP36773:2:Tyes1199601997276
BSP376:0:Tyes4-7032
BSUB:0:Tyes15461314-131201
BSUI204722:1:Tyes418032
BSUI470137:0:Tno4-7032
BTHA271848:1:Tno12411230125196
BTHE226186:0:Tyes-02343203517351734
BTHU281309:1:Tno14371332-133010
BTHU412694:1:Tno12821184-118210
BTRI382640:1:Tyes17-0211819
BTUR314724:0:Fyes-20---
BVIE269482:7:Tyes1181101812267
BWEI315730:4:Tyes14601359-135710
CABO218497:0:Tyes---0--
CACE272562:1:Tyes130-20052006
CAULO:0:Tyes1-4316203160
CBEI290402:0:Tyes485487484-01
CBLO203907:0:Tyes1-0213--
CBLO291272:0:Tno1-0218--
CBOT36826:1:Tno203---
CBOT441770:0:Tyes203---
CBOT441771:0:Tno203---
CBOT441772:1:Tno203---
CBOT498213:1:Tno203---
CBOT508765:1:Tyes467469466-01
CBOT515621:2:Tyes203---
CBOT536232:0:Tno203---
CBUR227377:1:Tyes11630159--
CBUR360115:1:Tno11680164--
CBUR434922:2:Tno16801692--
CCAV227941:1:Tyes---0--
CCHL340177:0:Tyes1794-780010131019
CCON360104:2:Tyes--0---
CCUR360105:0:Tyes--1515-0-
CDES477974:0:Tyes4224170415421419
CDIF272563:1:Tyes1138301381--
CDIP257309:0:Tyes-05-21
CEFF196164:0:Fyes-013-83
CFEL264202:1:Tyes---0--
CFET360106:0:Tyes--887--0
CGLU196627:0:Tyes-010-42
CHOM360107:1:Tyes--22--0
CHUT269798:0:Tyes-1420156--
CHYD246194:0:Tyes2190221214
CJAP155077:0:Tyes131203132311
CJEI306537:0:Tyes-901057
CJEJ192222:0:Tyes--0---
CJEJ195099:0:Tno--0---
CJEJ354242:2:Tyes--0---
CJEJ360109:0:Tyes--0---
CJEJ407148:0:Tno--0---
CKLU431943:1:Tyes01--18381837
CMIC31964:2:Tyes-270-4
CMIC443906:2:Tyes-507-3
CMUR243161:1:Tyes---0--
CNOV386415:0:Tyes15801578--10
CPEL335992:0:Tyes1-052-
CPER195102:1:Tyes203-518517
CPER195103:0:Tno203-465464
CPER289380:3:Tyes203-434433
CPHY357809:0:Tyes-03-5754
CPNE115711:1:Tyes---0--
CPNE115713:0:Tno---0--
CPNE138677:0:Tno---0--
CPNE182082:0:Tno---0--
CPRO264201:0:Fyes---0--
CPSY167879:0:Tyes270412705030173018
CRUT413404:0:Tyes2571827311812580
CSAL290398:0:Tyes110980109921097
CSP501479:6:Fyes---0--
CSP501479:8:Fyes0---12
CSP78:2:Tyes4554-045634555-
CTEP194439:0:Tyes21680-12414211436
CTET212717:0:Tyes931930--10
CTRA471472:0:Tyes---0--
CTRA471473:0:Tno---0--
CVES412965:0:Tyes234165661-2350
CVIO243365:0:Tyes3351334038013883
DARO159087:0:Tyes33330333213334380
DDES207559:0:Tyes-0108112710791
DETH243164:0:Tyes-01278-12351241
DGEO319795:1:Tyes--1219-01
DHAF138119:0:Tyes180718051809180301
DNOD246195:0:Tyes21-200--
DOLE96561:0:Tyes140523
DPSY177439:2:Tyes3043021
DRAD243230:3:Tyes--0-17081707
DRED349161:0:Tyes137313571375135410
DSHI398580:5:Tyes1401-1396014021404
DSP216389:0:Tyes-01158-11141120
DSP255470:0:Tno-01085-10401046
DVUL882:1:Tyes11022068821021
ECAN269484:0:Tyes--0---
ECAR218491:0:Tyes2623062228112810
ECHA205920:0:Tyes--0---
ECOL199310:0:Tno3479333348133101
ECOL316407:0:Tno2939397294139501
ECOL331111:6:Tno3256377325837501
ECOL362663:0:Tno2998394300039201
ECOL364106:1:Tno3329359333135601
ECOL405955:2:Tyes2993318--01
ECOL409438:6:Tyes3262448326444501
ECOL413997:0:Tno2823365282536301
ECOL439855:4:Tno3086359308835701
ECOL469008:0:Tno224480245028072806
ECOL481805:0:Tno225030250528352834
ECOL585034:0:Tno3026342302834001
ECOL585035:0:Tno3182389318438701
ECOL585055:0:Tno3301361330335901
ECOL585056:2:Tno3363422336542001
ECOL585057:0:Tno3292207329420510
ECOL585397:0:Tno3465336346733401
ECOL83334:0:Tno3879411388140901
ECOLI:0:Tno3005404300740201
ECOO157:0:Tno3893410389540801
EFAE226185:3:Tyes14052655865-10
EFER585054:1:Tyes70007021269268
ELIT314225:0:Tyes0-195230911097
ERUM254945:0:Tyes--0---
ERUM302409:0:Tno--0---
ESP42895:1:Tyes2875403287740201
FALN326424:0:Tyes-8-903
FJOH376686:0:Tyes-0----
FMAG334413:1:Tyes-0----
FNOD381764:0:Tyes24--0--
FNUC190304:0:Tyes013431330---
FPHI484022:1:Tyes770-01576475474
FRANT:0:Tno897-0306--
FSP106370:0:Tyes-9-1004
FSP1855:0:Tyes-1-01110
FSUC59374:0:Tyes--0-2795
FTUL351581:0:Tno694-3150--
FTUL393011:0:Tno609-2800--
FTUL393115:0:Tyes876-0304--
FTUL401614:0:Tyes1026-098--
FTUL418136:0:Tno0-11691130--
FTUL458234:0:Tno626-2870--
GBET391165:0:Tyes1-062-
GFOR411154:0:Tyes-7388940--
GKAU235909:1:Tyes565481-47901
GMET269799:1:Tyes140523
GOXY290633:5:Tyes1-0100421002
GSUL243231:0:Tyes4126032
GTHE420246:1:Tyes594516-51401
GURA351605:0:Tyes137990379838013800
GVIO251221:0:Tyes43543995762-03901
HACI382638:1:Tyes-0274---
HARS204773:0:Tyes210812109021071994
HAUR316274:2:Tyes194111-0912914
HCHE349521:0:Tyes981990972
HDUC233412:0:Tyes55-01587--
HHAL349124:0:Tyes130022990301
HHEP235279:0:Tyes--0--820
HINF281310:0:Tyes924-92609471698
HINF374930:0:Tyes790-7880767148
HINF71421:0:Tno823-82508461175
HMOD498761:0:Tyes7311054
HMUK485914:0:Tyes----0-
HNEP81032:0:Tyes2228--022333077
HPY:0:Tno--0---
HPYL357544:1:Tyes--0---
HPYL85963:0:Tno-9660---
HSOM205914:1:Tyes57-551320219
HSOM228400:0:Tno63-611380686
HWAL362976:1:Tyes----0-
ILOI283942:0:Tyes1482048315481549
JSP290400:1:Tyes1921-1919019221923
JSP375286:0:Tyes248612487024852393
KPNE272620:2:Tyes021122211016231622
KRAD266940:2:Fyes-60-24
LACI272621:0:Tyes0551-549--
LBIF355278:2:Tyes-40---
LBIF456481:2:Tno-40---
LBOR355276:1:Tyes-04--1
LBOR355277:1:Tno-04--1
LBRE387344:2:Tyes3202-0--
LCAS321967:1:Tyes0335-333986985
LCHO395495:0:Tyes133111332013302069
LDEL321956:0:Tyes0546-544--
LDEL390333:0:Tyes0476-474--
LGAS324831:0:Tyes0504-502--
LHEL405566:0:Tyes0424-422--
LINN272626:1:Tno34429534729310
LINT189518:1:Tyes-40--3
LINT267671:1:Tno-04--1
LINT363253:3:Tyes0--392--
LJOH257314:0:Tyes0519-517--
LLAC272622:5:Tyes-908892013891388
LLAC272623:0:Tyes-871853013811380
LMES203120:1:Tyes2161405-140301
LMON169963:0:Tno27822928122710
LMON265669:0:Tyes28023128322910
LPLA220668:0:Tyes17741298-130001
LPNE272624:0:Tno13010130232--
LPNE297245:1:Fno12760127730--
LPNE297246:1:Fyes14060140733--
LPNE400673:0:Tno12660297--
LREU557436:0:Tyes340924-922-0
LSAK314315:0:Tyes0348-346--
LSPH444177:1:Tyes-1531-152910
LWEL386043:0:Tyes27222327522110
LXYL281090:0:Tyes-507-3
MABS561007:1:Tyes-8-905
MACE188937:0:Tyes----10
MAER449447:0:Tyes5003-0-13744263
MAQU351348:2:Tyes115390153821540
MAVI243243:0:Tyes-19020216
MBAR269797:1:Tyes----01
MBOV233413:0:Tno-1230218
MBOV410289:0:Tno-1230218
MBUR259564:0:Tyes----01
MCAP243233:0:Tyes35003491433511
MEXT419610:0:Tyes153521538301
MFLA265072:0:Tyes162115631622016201562
MFLO265311:0:Tyes-0----
MGIL350054:3:Tyes-1701828
MHYO295358:0:Tno-0----
MLEP272631:0:Tyes-05-31
MLOT266835:2:Tyes6-9054
MMAG342108:0:Tyes1-0-24
MMAR394221:0:Tyes116-1121201170
MMAZ192952:0:Tyes----01
MMOB267748:0:Tyes-0----
MPEN272633:0:Tyes-0----
MPET420662:1:Tyes244107124310722450
MPUL272635:0:Tyes-0----
MSME246196:0:Tyes-1440424
MSP164756:1:Tno-019-178
MSP164757:0:Tno-019-178
MSP189918:2:Tyes-019-178
MSP266779:3:Tyes4-6032
MSP400668:0:Tyes140911410014082
MSP409:2:Tyes2-0957
MSUC221988:0:Tyes0-424927910
MSYN262723:0:Tyes-0----
MTBCDC:0:Tno-1240227
MTBRV:0:Tno-1210197
MTHE264732:0:Tyes250834
MTUB336982:0:Tno-1200187
MTUB419947:0:Tyes-1220207
MVAN350058:0:Tyes-1200189
MXAN246197:0:Tyes1112720--0-
NARO279238:0:Tyes1098-881010992
NEUR228410:0:Tyes946194709451829
NEUT335283:2:Tyes1648064921133
NFAR247156:2:Tyes-22023217
NGON242231:0:Tyes104411277481128-0
NHAM323097:2:Tyes2-0735
NMEN122586:0:Tno1699164101640727726
NMEN122587:0:Tyes069172970869868
NMEN272831:0:Tno89183269183110
NMEN374833:0:Tno073169474872871
NMUL323848:3:Tyes14460144511470154
NOCE323261:1:Tyes369136803702
NPHA348780:2:Tyes----0-
NSEN222891:0:Tyes--020--
NSP103690:6:Tyes362749680-29852041
NSP35761:1:Tyes-2-316380
NSP387092:0:Tyes-634369--0
NWIN323098:0:Tyes2-0634
OANT439375:5:Tyes3-0745
OCAR504832:0:Tyes4-603-
OIHE221109:0:Tyes996939-93701
OTSU357244:0:Fyes0-533---
PACN267747:0:Tyes-2--01
PAER208963:0:Tyes395313954239520
PAER208964:0:Tno574157505732
PARC259536:0:Tyes1312113830131199
PATL342610:0:Tyes219912200027362735
PCAR338963:0:Tyes415032
PCRY335284:1:Tyes1462-153301461108
PDIS435591:0:Tyes-015416862087-
PENT384676:0:Tyes137770377623778
PFLU205922:0:Tyes111621150117
PFLU216595:1:Tyes125322520254
PFLU220664:0:Tyes112521240126
PGIN242619:0:Tyes-0----
PHAL326442:1:Tyes241374624147453540
PING357804:0:Tyes1646059822792278
PLUM243265:0:Fyes33536633546501
PLUT319225:0:Tyes681948-013491351
PMAR146891:0:Tyes--6931950-
PMAR167539:0:Tyes0-1210669637-
PMAR167540:0:Tyes--770-1990
PMAR167542:0:Tyes--7311110-
PMAR167546:0:Tyes--917-2330
PMAR167555:0:Tyes0-1499605542-
PMAR59920:0:Tno1414-734290-
PMAR74546:0:Tyes--6631840-
PMAR74547:0:Tyes1023-898-0-
PMAR93060:0:Tyes--7021990-
PMEN399739:0:Tyes112221210123
PMOB403833:0:Tyes817818--14790
PMUL272843:1:Tyes3-015741548588
PNAP365044:8:Tyes1-299303028
PPEN278197:0:Tyes4210-2--
PPRO298386:2:Tyes2-02485444445
PPUT160488:0:Tno141100410924111
PPUT351746:0:Tyes139880398723989
PPUT76869:0:Tno141800417924181
PRUM264731:0:Tyes-332---0
PSP117:0:Tyes033222397181652682714
PSP296591:2:Tyes111272112803723
PSP312153:0:Tyes14200419240
PSP56811:2:Tyes12681556012671763
PSTU379731:0:Tyes128100280922811
PSYR205918:0:Tyes136790367823680
PSYR223283:2:Tyes139790397823980
PTHE370438:0:Tyes240631792
RAKA293614:0:Fyes161-0---
RALB246199:0:Tyes15181997--02
RBEL336407:0:Tyes0-83---
RBEL391896:0:Fno0-1440---
RCAN293613:0:Fyes114-0---
RCAS383372:0:Tyes223513470171124072408
RCON272944:0:Tno147-0---
RDEN375451:4:Tyes1910-1913019091908
RETL347834:5:Tyes4-0125-
REUT264198:3:Tyes43304341432309
REUT381666:2:Tyes226712268022662153
RFEL315456:2:Tyes141-0---
RFER338969:1:Tyes509131750813185100
RLEG216596:6:Tyes4-0125-
RMAS416276:1:Tyes99-0---
RMET266264:2:Tyes230912310023082176
RPAL258594:0:Tyes3-0745
RPAL316055:0:Tyes282-2870281-
RPAL316056:0:Tyes3-0947
RPAL316057:0:Tyes15-19052
RPAL316058:0:Tyes4-0856
RPOM246200:1:Tyes1733-1736017321731
RPRO272947:0:Tyes0-----
RRIC392021:0:Fno145-0---
RRIC452659:0:Tyes150-0---
RRUB269796:1:Tyes4-5032
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