CANDIDATE ID: 419

CANDIDATE ID: 419

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9937087e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G6465 (lolA) (b0891)
   Products of gene:
     - G6465-MONOMER (periplasmic chaperone, effects translocation of lipoproteins from inner membrane to outer)

- G6464 (ftsK) (b0890)
   Products of gene:
     - G6464-MONOMER (essential cell division protein FtsK)
     - CPLX0-3959 (Xer site-specific recombination system)

- EG12690 (rarA) (b0892)
   Products of gene:
     - EG12690-MONOMER (recombination factor)

- EG11032 (trxB) (b0888)
   Products of gene:
     - THIOREDOXIN-REDUCT-NADPH-MONOMER (thioredoxin reductase monomer)
     - THIOREDOXIN-REDUCT-NADPH-CPLX (thioredoxin reductase)
       Reactions:
        an oxidized thioredoxin + NADPH + H+  ->  a reduced thioredoxin + NADP+
         In pathways
         THIOREDOX-PWY (thioredoxin pathway)

- EG10947 (serS) (b0893)
   Products of gene:
     - SERS-MONOMER (seryl-tRNA synthetase)
     - SERS-CPLX (seryl-tRNA synthetase)
       Reactions:
        tRNAsec + L-serine + ATP  ->  L-seryl-tRNAsec + diphosphate + AMP
         In pathways
         PWY0-901 (selenocysteine biosynthesis I (bacteria))
         PWY-6281 (PWY-6281)
        tRNAser + L-serine + ATP  ->  L-seryl-tRNAser + diphosphate + AMP
         In pathways
         TRNA-CHARGING-PWY (tRNA charging pathway)

- EG10547 (lrp) (b0889)
   Products of gene:
     - PD00353 (Lrp transcriptional dual regulator)
       Regulatees:
        TU00198 (adhE)
        TU00221 (lysU)
        TU00170 (gcvTHP)
        TU0-1762 (osmC)
        TU0-1761 (osmC)
        TU00224 (serA)
        TU00223 (sdaA)
        TU00222 (oppABCDF)
        TU00095 (aidB)
        TU00091 (malT)
        TU00225 (kbl-tdh)
        TU0-1981 (osmY)
        TU00393 (stpA)
        TU00477 (ompC)
        TU00184 (livKHMGF)
        TU183 (fimE)
        TU182 (fimAICDFGH)
        TU462 (dadAX)
        TU461 (dadAX)
        TU00476 (ompC)
        TU0-5964 (serC)
        TU00357 (serC-aroA)
        TU00050 (ompF)
        TU00081 (ilvIH)
        TU0-13799 (argO)
        TU0-13560 (yojI)
        TU00182 (gltBDF)
        TU00181 (lrp)
        TU00282 (hdeAB-yhiD)
        TU0-1191 (rrsD-ileU-alaU-rrlD-rrfD-thrV-rrfF)
        TU0-1189 (rrsH-ileV-alaV-rrlH-rrfH)
        TU0-1187 (rrsG-gltW-rrlG-rrfG)
        TU0-1186 (rrsE-gltV-rrlE-rrfE)
        TU0-1183 (rrsC-gltU-rrlC-rrfC)
        TU0-1181 (rrsA-ileT-alaT-rrlA-rrfA)
        TU0-2342 (serA)
        TU0-4001 (csiD-ygaF-gabDTP)
        TU861 (yeiL)
        TU00255 (dadAX)
        TU00183 (livJ)
        TU0-2644 (micF)
        TU0-1182 (rrsB-gltT-rrlB-rrfB)
        TU525 (ilvLXG_1G_2MEDA)
        TU00049 (ompC)
     - MONOMER0-155 (Lrp-Leucine transcriptional dual regulator)
       Regulatees:
        TU00198 (adhE)
        TU00221 (lysU)
        TU00170 (gcvTHP)
        TU0-1762 (osmC)
        TU0-1761 (osmC)
        TU00224 (serA)
        TU00223 (sdaA)
        TU00222 (oppABCDF)
        TU00095 (aidB)
        TU00091 (malT)
        TU00225 (kbl-tdh)
        TU0-1981 (osmY)
        TU00393 (stpA)
        TU00477 (ompC)
        TU00184 (livKHMGF)
        TU183 (fimE)
        TU182 (fimAICDFGH)
        TU462 (dadAX)
        TU461 (dadAX)
        TU00476 (ompC)
        TU0-5964 (serC)
        TU00357 (serC-aroA)
        TU00050 (ompF)
        TU00081 (ilvIH)
        TU0-13799 (argO)
        TU0-13560 (yojI)
        TU00182 (gltBDF)
        TU00181 (lrp)
        TU00282 (hdeAB-yhiD)
        TU0-1191 (rrsD-ileU-alaU-rrlD-rrfD-thrV-rrfF)
        TU0-1189 (rrsH-ileV-alaV-rrlH-rrfH)
        TU0-1187 (rrsG-gltW-rrlG-rrfG)
        TU0-1186 (rrsE-gltV-rrlE-rrfE)
        TU0-1183 (rrsC-gltU-rrlC-rrfC)
        TU0-1181 (rrsA-ileT-alaT-rrlA-rrfA)
        TU0-2342 (serA)
        TU0-4001 (csiD-ygaF-gabDTP)
        TU861 (yeiL)
        TU00255 (dadAX)
        TU00183 (livJ)
        TU0-2644 (micF)
        TU0-1182 (rrsB-gltT-rrlB-rrfB)
        TU525 (ilvLXG_1G_2MEDA)
        TU00049 (ompC)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 223
Effective number of orgs (counting one per cluster within 468 clusters): 152

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM45
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola6
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A6
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110186
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103316
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae6
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-106
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80046
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339136
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3066
XAUT78245 ncbi Xanthobacter autotrophicus Py25
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1146
VEIS391735 ncbi Verminephrobacter eiseniae EF01-26
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TTUR377629 ncbi Teredinibacter turnerae T79016
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
TCRU317025 ncbi Thiomicrospira crunogena XCL-25
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
SSP94122 ncbi Shewanella sp. ANA-36
SSP644076 Silicibacter sp. TrichCH4B5
SSP292414 ncbi Ruegeria sp. TM10405
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB36
SPRO399741 ncbi Serratia proteamaculans 5686
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SONE211586 ncbi Shewanella oneidensis MR-16
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLOI323850 ncbi Shewanella loihica PV-46
SLAC55218 Ruegeria lacuscaerulensis5
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-406
SBOY300268 ncbi Shigella boydii Sb2276
SBAL402882 ncbi Shewanella baltica OS1856
SBAL399599 ncbi Shewanella baltica OS1956
SALA317655 ncbi Sphingopyxis alaskensis RB22565
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170295
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.15
RSOL267608 ncbi Ralstonia solanacearum GMI10006
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RPOM246200 ncbi Ruegeria pomeroyi DSS-35
RPAL316058 ncbi Rhodopseudomonas palustris HaA25
RPAL316057 ncbi Rhodopseudomonas palustris BisB55
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL316055 ncbi Rhodopseudomonas palustris BisA535
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH346
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38415
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1346
RETL347834 ncbi Rhizobium etli CFN 425
RDEN375451 ncbi Roseobacter denitrificans OCh 1145
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP56811 Psychrobacter sp.5
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PSP296591 ncbi Polaromonas sp. JS6666
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PPRO298386 ncbi Photobacterium profundum SS96
PNAP365044 ncbi Polaromonas naphthalenivorans CJ26
PMUL272843 ncbi Pasteurella multocida multocida Pm706
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PING357804 ncbi Psychromonas ingrahamii 376
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PCRY335284 ncbi Psychrobacter cryohalolentis K55
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PARC259536 ncbi Psychrobacter arcticus 273-45
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
OCAR504832 ncbi Oligotropha carboxidovorans OM55
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2555
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534426
NMEN272831 ncbi Neisseria meningitidis FAM186
NMEN122587 ncbi Neisseria meningitidis Z24916
NMEN122586 ncbi Neisseria meningitidis MC586
NHAM323097 ncbi Nitrobacter hamburgensis X145
NGON242231 ncbi Neisseria gonorrhoeae FA 10906
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124445
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E6
MSP409 Methylobacterium sp.5
MSP400668 ncbi Marinomonas sp. MWYL16
MSP266779 ncbi Chelativorans sp. BNC15
MPET420662 ncbi Methylibium petroleiphilum PM16
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MFLA265072 ncbi Methylobacillus flagellatus KT5
MCAP243233 ncbi Methylococcus capsulatus Bath5
MAQU351348 ncbi Marinobacter aquaeolei VT86
LPNE400673 ncbi Legionella pneumophila Corby5
LPNE297246 ncbi Legionella pneumophila Paris5
LPNE297245 ncbi Legionella pneumophila Lens5
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 15
LCHO395495 ncbi Leptothrix cholodnii SP-66
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille6
JSP290400 ncbi Jannaschia sp. CCS15
ILOI283942 ncbi Idiomarina loihiensis L2TR6
HSOM228400 ncbi Haemophilus somnus 23366
HSOM205914 ncbi Haemophilus somnus 129PT6
HINF71421 ncbi Haemophilus influenzae Rd KW206
HINF374930 ncbi Haemophilus influenzae PittEE6
HINF281310 ncbi Haemophilus influenzae 86-028NP6
HHAL349124 ncbi Halorhodospira halophila SL15
HDUC233412 ncbi Haemophilus ducreyi 35000HP6
HCHE349521 ncbi Hahella chejuensis KCTC 23966
HARS204773 ncbi Herminiimonas arsenicoxydans6
FTUL401614 ncbi Francisella novicida U1125
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250175
ESP42895 Enterobacter sp.6
ELIT314225 ncbi Erythrobacter litoralis HTCC25945
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DSHI398580 ncbi Dinoroseobacter shibae DFL 125
DNOD246195 ncbi Dichelobacter nodosus VCS1703A5
DARO159087 ncbi Dechloromonas aromatica RCB6
CVIO243365 ncbi Chromobacterium violaceum ATCC 124726
CSP78 Caulobacter sp.5
CSAL290398 ncbi Chromohalobacter salexigens DSM 30436
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CJAP155077 Cellvibrio japonicus6
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1115
CBUR360115 ncbi Coxiella burnetii RSA 3315
CBUR227377 ncbi Coxiella burnetii RSA 4935
CAULO ncbi Caulobacter crescentus CB155
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTHA271848 ncbi Burkholderia thailandensis E2646
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13305
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.6
BPSE320373 ncbi Burkholderia pseudomallei 6686
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962436
BPET94624 Bordetella petrii6
BPER257313 ncbi Bordetella pertussis Tohama I6
BPAR257311 ncbi Bordetella parapertussis 128226
BOVI236 Brucella ovis5
BMEL359391 ncbi Brucella melitensis biovar Abortus 23085
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M5
BMAL320389 ncbi Burkholderia mallei NCTC 102476
BMAL320388 ncbi Burkholderia mallei SAVP16
BMAL243160 ncbi Burkholderia mallei ATCC 233446
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB506
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
ASP76114 ncbi Aromatoleum aromaticum EbN16
ASP62977 ncbi Acinetobacter sp. ADP16
ASP62928 ncbi Azoarcus sp. BH726
ASP232721 ncbi Acidovorax sp. JS426
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL036
APLE416269 ncbi Actinobacillus pleuropneumoniae L206
AHYD196024 Aeromonas hydrophila dhakensis6
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ACAU438753 ncbi Azorhizobium caulinodans ORS 5715
ABOR393595 ncbi Alcanivorax borkumensis SK25
ABAU360910 ncbi Bordetella avium 197N6
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455
AAVE397945 ncbi Acidovorax citrulli AAC00-16


Names of the homologs of the genes in the group in each of these orgs
  G6465   G6464   EG12690   EG11032   EG10947   EG10547   
ZMOB264203 ZMO1702ZMO0121ZMO1142ZMO0986ZMO1107
YPSE349747 YPSIP31758_2595YPSIP31758_2596YPSIP31758_2594YPSIP31758_2598YPSIP31758_2593YPSIP31758_2597
YPSE273123 YPTB1402YPTB1401YPTB1403YPTB1399YPTB1404YPTB1400
YPES386656 YPDSF_2318YPDSF_2319YPDSF_2317YPDSF_2321YPDSF_2316YPDSF_2320
YPES377628 YPN_2603YPN_2604YPN_2602YPN_2606YPN_2601YPN_2605
YPES360102 YPA_0667YPA_0666YPA_0668YPA_0664YPA_0669YPA_0665
YPES349746 YPANGOLA_A1614YPANGOLA_A1613YPANGOLA_A1615YPANGOLA_A1611YPANGOLA_A1616YPANGOLA_A1612
YPES214092 YPO1377YPO1376YPO1378YPO1374YPO1379YPO1375
YPES187410 Y2798Y2800Y2797Y2802Y2796Y2801
YENT393305 YE1526YE1525YE1527YE1523YE1528YE1524
XORY360094 XOOORF_2775XOOORF_2777XOOORF_2772XOOORF_2778XOOORF_2888XOOORF_4721
XORY342109 XOO2403XOO2405XOO2401XOO2406XOO1988XOO0629
XORY291331 XOO2544XOO2546XOO2542XOO2547XOO2116XOO0692
XFAS405440 XFASM12_0795XFASM12_0793XFASM12_0796XFASM12_0791XFASM12_1477
XFAS183190 PD_0672PD_0670PD_0673PD_0669PD_1318
XFAS160492 XF1452XF1450XF1453XF1448XF2286
XCAM487884 XCC-B100_2273XCC-B100_2271XCC-B100_2275XCC-B100_2270XCC-B100_2666XCC-B100_3835
XCAM316273 XCAORF_2254XCAORF_2252XCAORF_2255XCAORF_2250XCAORF_1873XCAORF_0665
XCAM314565 XC_2211XC_2213XC_2209XC_2214XC_2640XC_3720
XCAM190485 XCC1974XCC1972XCC1976XCC1971XCC1594XCC3649
XAXO190486 XAC2008XAC2006XAC2010XAC2005XAC1653XAC3689
XAUT78245 XAUT_1841XAUT_4770XAUT_2753XAUT_4404XAUT_3448
VVUL216895 VV1_2949VV1_2950VV1_2947VV1_2810VV1_2946VV1_2951
VVUL196600 VV1323VV1322VV1324VV1455VV1325VV1321
VPAR223926 VP1106VP1105VP1107VP1251VP1108VP1104
VFIS312309 VF0906VF0905VF0907VF0902VF0908VF0904
VEIS391735 VEIS_1760VEIS_1759VEIS_1761VEIS_1758VEIS_3651VEIS_4443
VCHO345073 VC0395_A0626VC0395_A1493VC0395_A0627VC0395_A0803VC0395_A0628VC0395_A1494
VCHO VC1107VC1903VC1108VC1182VC1110VC1904
TTUR377629 TERTU_1970TERTU_1969TERTU_1971TERTU_1968TERTU_1973TERTU_3319
TDEN292415 TBD_1497TBD_1002TBD_1496TBD_1001TBD_1229
TCRU317025 TCR_0765TCR_0764TCR_0766TCR_0763TCR_0768
STYP99287 STM0961STM0960STM0962STM0958STM0963STM0959
SSP94122 SHEWANA3_2051SHEWANA3_2050SHEWANA3_2052SHEWANA3_2047SHEWANA3_2054SHEWANA3_2049
SSP644076 SCH4B_3436SCH4B_1072SCH4B_3922SCH4B_4454SCH4B_3833
SSP292414 TM1040_0060TM1040_0288TM1040_0614TM1040_0994TM1040_1694
SSON300269 SSO_0892SSO_0891SSO_0893SSO_0889SSO_0894SSO_0890
SSED425104 SSED_2128SSED_2127SSED_2129SSED_2124SSED_2131SSED_2126
SPRO399741 SPRO_1684SPRO_1683SPRO_1685SPRO_1681SPRO_1686SPRO_1682
SPEA398579 SPEA_2232SPEA_2233SPEA_2231SPEA_2258SPEA_2229SPEA_2234
SONE211586 SO_2307SO_2306SO_2308SO_2303SO_2310SO_2305
SMEL266834 SMC03808SMC01279SMC01224SMC02064SMC00681
SMED366394 SMED_3052SMED_1015SMED_1248SMED_1167SMED_2574
SLOI323850 SHEW_2023SHEW_2024SHEW_2022SHEW_2028SHEW_2020SHEW_2025
SLAC55218 SL1157_1457SL1157_1603SL1157_2002SL1157_2444SL1157_1786
SHIGELLA LOLAFTSKYCAJTRXBSERSLRP
SHAL458817 SHAL_2216SHAL_2217SHAL_2215SHAL_2024SHAL_2213SHAL_2218
SGLO343509 SG1109SG1108SG1110SG1106SG1111SG1107
SFLE373384 SFV_0882SFV_0881SFV_0883SFV_0879SFV_0884SFV_0880
SFLE198214 AAN42483.1AAN42482.1AAN42484.1AAN42480.1AAN42485.1AAN42481.1
SENT454169 SEHA_C1060SEHA_C1059SEHA_C1061SEHA_C1057SEHA_C1062SEHA_C1058
SENT321314 SCH_0915SCH_0914SCH_0916SCH_0912SCH_0917SCH_0913
SENT295319 SPA1837SPA1838SPA1836SPA1840SPA1835SPA1839
SENT220341 STY0959STY0958STY0960STY0956STY0961STY0957
SENT209261 T1973T1974T1972T1976T1971T1975
SDYS300267 SDY_2370SDY_2371SDY_2369SDY_2373SDY_2368SDY_2372
SDEN318161 SDEN_1744SDEN_1743SDEN_1745SDEN_1713SDEN_1747SDEN_1742
SDEG203122 SDE_1694SDE_1693SDE_1695SDE_1692SDE_1697SDE_2299
SBOY300268 SBO_0824SBO_0823SBO_0825SBO_0821SBO_0826SBO_0822
SBAL402882 SHEW185_2214SHEW185_2215SHEW185_2213SHEW185_2218SHEW185_2211SHEW185_2216
SBAL399599 SBAL195_2322SBAL195_2323SBAL195_2321SBAL195_2326SBAL195_2319SBAL195_2324
SALA317655 SALA_2669SALA_2156SALA_0145SALA_0722SALA_2774
RSPH349102 RSPH17025_2900RSPH17025_2506RSPH17025_0256RSPH17025_0453RSPH17025_2327
RSPH349101 RSPH17029_0145RSPH17029_0389RSPH17029_0228RSPH17029_0441RSPH17029_0837
RSPH272943 RSP_1495RSP_1743RSP_1576RSP_1795RSP_2165
RSOL267608 RSC2340RSP0884RSC2338RSC2342RSC2337RSC0927
RRUB269796 RRU_A3705RRU_A2660RRU_A2898RRU_A1770RRU_A0655
RPOM246200 SPO_3416SPO_0515SPO_0903SPO_2325SPO_3009
RPAL316058 RPB_0377RPB_2324RPB_1512RPB_2742RPB_1513
RPAL316057 RPD_0444RPD_3155RPD_1453RPD_2787RPD_1454
RPAL316056 RPC_0276RPC_3416RPC_3838RPC_2517RPC_3837
RPAL316055 RPE_0398RPE_3556RPE_3964RPE_2700RPE_3963
RPAL258594 RPA0279RPA3220RPA4075RPA2845RPA4074
RMET266264 RMET_0686RMET_1596RMET_0694RMET_0684RMET_0695RMET_0741
RLEG216596 RL4563RL1807RL3428RL2049PRL120552
RFER338969 RFER_3177RFER_3178RFER_3176RFER_3179RFER_3243RFER_2022
REUT381666 H16_A0755H16_A1582H16_A0763H16_A0753H16_A0764H16_A0818
REUT264198 REUT_A2599REUT_A2600REUT_A2595REUT_A2601REUT_A2594REUT_A2546
RETL347834 RHE_CH03972RHE_CH01708RHE_CH02975RHE_CH01826RHE_PF00385
RDEN375451 RD1_0033RD1_1439RD1_3505RD1_2541RD1_2510
PSYR223283 PSPTO_3348PSPTO_3349PSPTO_3347PSPTO_1178PSPTO_3345PSPTO_0100
PSYR205918 PSYR_3178PSYR_3179PSYR_3177PSYR_1016PSYR_3175PSYR_0234
PSTU379731 PST_2292PST_2293PST_2291PST_2294PST_2289PST_0482
PSP56811 PSYCPRWF_0893PSYCPRWF_0620PSYCPRWF_0257PSYCPRWF_0619PSYCPRWF_1539
PSP312153 PNUC_0690PNUC_0748PNUC_0689PNUC_0692PNUC_1553
PSP296591 BPRO_3798BPRO_3799BPRO_3797BPRO_3801BPRO_0953BPRO_0399
PPUT76869 PPUTGB1_3608PPUTGB1_3609PPUTGB1_3607PPUTGB1_0820PPUTGB1_3605PPUTGB1_5323
PPUT351746 PPUT_1830PPUT_1829PPUT_1831PPUT_0809PPUT_1833PPUT_5181
PPUT160488 PP_4003PP_4004PP_4002PP_0786PP_4000PP_5271
PPRO298386 PBPRA1163PBPRA1162PBPRA1164PBPRA1159PBPRA1165PBPRA1161
PNAP365044 PNAP_3210PNAP_3211PNAP_3209PNAP_3213PNAP_3335PNAP_3888
PMUL272843 PM0256PM0255PM0257PM0573PM0258PM0254
PMEN399739 PMEN_2387PMEN_2388PMEN_2386PMEN_2389PMEN_2384PMEN_0244
PLUM243265 PLU1602PLU1601PLU1603PLU1599PLU1604PLU1600
PING357804 PING_1663PING_1662PING_1664PING_2209PING_1666PING_3606
PHAL326442 PSHAA1715PSHAA1716PSHAA1714PSHAA1720PSHAA1712PSHAA1717
PFLU220664 PFL_3879PFL_3880PFL_3878PFL_0945PFL_3876PFL_6039
PFLU216595 PFLU3800PFLU3801PFLU3799PFLU5162PFLU3797PFLU5969
PFLU205922 PFL_3585PFL_3586PFL_3584PFL_0887PFL_3582PFL_5527
PENT384676 PSEEN2213PSEEN2212PSEEN2214PSEEN0924PSEEN2216PSEEN5417
PCRY335284 PCRYO_1753PCRYO_0430PCRYO_0103PCRYO_0429PCRYO_1850
PATL342610 PATL_2459PATL_2460PATL_2458PATL_2370PATL_2456PATL_2461
PARC259536 PSYC_1571PSYC_0389PSYC_0094PSYC_0388PSYC_1618
PAER208964 PA2614PA2615PA2613PA2616PA2612PA5308
PAER208963 PA14_30310PA14_30290PA14_30320PA14_30280PA14_30330PA14_70080
OCAR504832 OCAR_4355OCAR_5709OCAR_5125OCAR_6264OCAR_5126
OANT439375 OANT_0960OANT_1983OANT_1664OANT_2342OANT_1596
NWIN323098 NWI_0083NWI_1392NWI_2453NWI_1776NWI_2452
NMUL323848 NMUL_A0178NMUL_A0176NMUL_A0179NMUL_A0023NMUL_A0180
NMEN374833 NMCC_0570NMCC_1226NMCC_1143NMCC_1239NMCC_1597NMCC_0519
NMEN272831 NMC0566NMC1251NMC1159NMC1261NMC1602NMC1566
NMEN122587 NMA0830NMA1527NMA1433NMA1538NMA1943NMA1905
NMEN122586 NMB_0622NMB_1314NMB_1258NMB_1324NMB_1684NMB_1650
NHAM323097 NHAM_0090NHAM_1573NHAM_2880NHAM_1791NHAM_2879
NGON242231 NGO0205NGO0851NGO0696NGO0580NGO1335NGO1294
NEUT335283 NEUT_2489NEUT_2488NEUT_2490NEUT_0792NEUT_0263
NEUR228410 NE1052NE1051NE1053NE1929NE0180
NARO279238 SARO_0435SARO_2547SARO_2343SARO_0850SARO_2933
MSUC221988 MS1452MS1454MS1451MS0951MS1450MS1455
MSP409 M446_4908M446_6365M446_3793M446_6577M446_2201
MSP400668 MMWYL1_3255MMWYL1_3256MMWYL1_3254MMWYL1_3225MMWYL1_3252MMWYL1_4392
MSP266779 MESO_3235MESO_1650MESO_2112MESO_1803MESO_1324
MPET420662 MPE_A1121MPE_A1120MPE_A1122MPE_A1118MPE_A2692MPE_A3749
MLOT266835 MLL4243MLR0329MLL2552MLL1081MLR1161
MFLA265072 MFLA_1125MFLA_1124MFLA_1128MFLA_1119MFLA_1129
MCAP243233 MCA_1783MCA_1695MCA_1782MCA_1694MCA_1971
MAQU351348 MAQU_1549MAQU_1550MAQU_1548MAQU_1753MAQU_1547MAQU_2050
LPNE400673 LPC_1206LPC_1207LPC_1205LPC_1208LPC_2833
LPNE297246 LPP1729LPP1730LPP1728LPP1731LPP0575
LPNE297245 LPL1729LPL1730LPL1728LPL1731LPL0551
LPNE272624 LPG1765LPG1766LPG1764LPG1767LPG0513
LCHO395495 LCHO_0757LCHO_0756LCHO_0758LCHO_0754LCHO_0692LCHO_1629
KPNE272620 GKPORF_B5364GKPORF_B5363GKPORF_B5365GKPORF_B5360GKPORF_B5366GKPORF_B5362
JSP375286 MMA_1155MMA_1154MMA_1156MMA_1153MMA_1157MMA_0146
JSP290400 JANN_0428JANN_0621JANN_3338JANN_1070JANN_3495
ILOI283942 IL0666IL0667IL0665IL0670IL0663IL0668
HSOM228400 HSM_1283HSM_0376HSM_1282HSM_1028HSM_1560HSM_0375
HSOM205914 HS_0814HS_1186HS_0813HS_1148HS_1075HS_1187
HINF71421 HI_1591HI_1592HI_1590HI_1158HI_0110HI_1596
HINF374930 CGSHIEE_05575CGSHIEE_05580CGSHIEE_05570CGSHIEE_06250CGSHIEE_02725CGSHIEE_05585
HINF281310 NTHI1456NTHI1455NTHI1458NTHI1327NTHI0200NTHI1454
HHAL349124 HHAL_1394HHAL_1396HHAL_1393HHAL_2289HHAL_1392
HDUC233412 HD_1237HD_1476HD_1296HD_0333HD_1133HD_1477
HCHE349521 HCH_02446HCH_02445HCH_02447HCH_02344HCH_02449HCH_00973
HARS204773 HEAR1019HEAR1018HEAR1020HEAR1017HEAR1022HEAR0121
FTUL401614 FTN_0293FTN_0294FTN_1413FTN_0580FTN_0647
FPHI484022 FPHI_0532FPHI_0531FPHI_1274FPHI_0259FPHI_0173
ESP42895 ENT638_1415ENT638_1414ENT638_1416ENT638_1412ENT638_1417ENT638_1413
ELIT314225 ELI_11845ELI_01935ELI_04700ELI_00610ELI_03085
EFER585054 EFER_1040EFER_1039EFER_1041EFER_1036EFER_1042EFER_1038
ECOO157 LOLAFTSKYCAJTRXBSERSLRP
ECOL83334 ECS0976ECS0975ECS0977ECS0973ECS0978ECS0974
ECOL585397 ECED1_0865ECED1_0864ECED1_0866ECED1_0862ECED1_0867ECED1_0863
ECOL585057 ECIAI39_2257ECIAI39_2260ECIAI39_2256ECIAI39_2262ECIAI39_2255ECIAI39_2261
ECOL585056 ECUMN_1086ECUMN_1085ECUMN_1087ECUMN_1083ECUMN_1088ECUMN_1084
ECOL585055 EC55989_0936EC55989_0935EC55989_0937EC55989_0933EC55989_0938EC55989_0934
ECOL585035 ECS88_0922ECS88_0921ECS88_0923ECS88_0917ECS88_0924ECS88_0919
ECOL585034 ECIAI1_0931ECIAI1_0930ECIAI1_0932ECIAI1_0928ECIAI1_0933ECIAI1_0929
ECOL481805 ECOLC_2705ECOLC_2706ECOLC_2704ECOLC_2708ECOLC_2703ECOLC_2707
ECOL469008 ECBD_2704ECBD_2705ECBD_2703ECBD_2707ECBD_2702ECBD_2706
ECOL439855 ECSMS35_2229ECSMS35_2230ECSMS35_2228ECSMS35_2233ECSMS35_2227ECSMS35_2231
ECOL413997 ECB_00895ECB_00894ECB_00896ECB_00892ECB_00897ECB_00893
ECOL409438 ECSE_0949ECSE_0948ECSE_0950ECSE_0946ECSE_0951ECSE_0947
ECOL405955 APECO1_1198APECO1_1199APECO1_1197APECO1_1201APECO1_1196APECO1_1200
ECOL364106 UTI89_C0906UTI89_C0905UTI89_C0907UTI89_C0903UTI89_C0908UTI89_C0904
ECOL362663 ECP_0905ECP_0904ECP_0906ECP_0902ECP_0907ECP_0903
ECOL331111 ECE24377A_0966ECE24377A_0965ECE24377A_0967ECE24377A_0962ECE24377A_0968ECE24377A_0964
ECOL316407 ECK0882:JW0874:B0891ECK0881:JW0873:B0890ECK0883:JW0875:B0892ECK0879:JW0871:B0888ECK0884:JW0876:B0893ECK0880:JW0872:B0889
ECOL199310 C1028C1027C1029C1025C1030C1026
ECAR218491 ECA2646ECA2647ECA2645ECA2649ECA2644ECA2648
DSHI398580 DSHI_0059DSHI_0313DSHI_2654DSHI_1863DSHI_2477
DNOD246195 DNO_0484DNO_0483DNO_0485DNO_1099DNO_1065
DARO159087 DARO_1296DARO_1295DARO_1298DARO_1293DARO_1300DARO_0512
CVIO243365 CV_1614CV_2479CV_1376CV_2813CV_1375CV_1913
CSP78 CAUL_5007CAUL_1651CAUL_4304CAUL_3115CAUL_1045
CSAL290398 CSAL_2435CSAL_2436CSAL_1327CSAL_2959CSAL_2315CSAL_1531
CPSY167879 CPS_2758CPS_2759CPS_2757CPS_2762CPS_2755CPS_2760
CJAP155077 CJA_2555CJA_2556CJA_2554CJA_2561CJA_2552CJA_0023
CBUR434922 COXBU7E912_1281COXBU7E912_1282COXBU7E912_1280COXBU7E912_1283COXBU7E912_1278
CBUR360115 COXBURSA331_A1342COXBURSA331_A1343COXBURSA331_A1341COXBURSA331_A1344COXBURSA331_A1339
CBUR227377 CBU_1190CBU_1191CBU_1189CBU_1193CBU_1188
CAULO CC3704CC1283CC2871CC1999CC0805
BVIE269482 BCEP1808_0892BCEP1808_2410BCEP1808_0893BCEP1808_0890BCEP1808_0895BCEP1808_0986
BTHA271848 BTH_I1562BTH_I1561BTH_I1563BTH_I1560BTH_I1565BTH_I1657
BSUI470137 BSUIS_A1735BSUIS_A1254BSUIS_A1555BSUIS_A0923BSUIS_A1629
BSUI204722 BR_1895BR_1206BR_1499BR_0885BR_1571
BSP376 BRADO0224BRADO4634BRADO1321BRADO4044BRADO3802
BSP36773 BCEP18194_A4079BCEP18194_A4078BCEP18194_A4080BCEP18194_A4077BCEP18194_A4082BCEP18194_A4179
BPSE320373 BURPS668_2989BURPS668_1185BURPS668_2988BURPS668_2991BURPS668_2986BURPS668_2863
BPSE320372 BURPS1710B_A3332BURPS1710B_A1415BURPS1710B_A3331BURPS1710B_A3335BURPS1710B_A3329BURPS1710B_A3222
BPSE272560 BPSL2603BPSL1109BPSL2602BPSL2605BPSL2600BPSL2496
BPET94624 BPET1575BPET1574BPET1586BPET1573BPET1587BPET2579
BPER257313 BP2472BP2473BP2471BP2474BP2470BP2635
BPAR257311 BPP3461BPP3462BPP3460BPP3463BPP3459BPP3087
BOVI236 GBOORF1892GBOORF1217GBOORF1513GBOORF0907GBOORF1583
BMEL359391 BAB1_1895BAB1_1228BAB1_1518BAB1_0904BAB1_1587
BMEL224914 BMEI0168BMEI0784BMEI0512BMEI1082BMEI0447
BMAL320389 BMA10247_1989BMA10247_1990BMA10247_1988BMA10247_1991BMA10247_1986BMA10247_0223
BMAL320388 BMASAVP1_A0791BMASAVP1_A1032BMASAVP1_A0792BMASAVP1_A0789BMASAVP1_A0794BMASAVP1_A2550
BMAL243160 BMA_2121BMA_2122BMA_2120BMA_2123BMA_2118BMA_0407
BJAP224911 BLR0616BLL5367BLR7381BLL4748BLL7260
BCEN331272 BCEN2424_2321BCEN2424_0977BCEN2424_0974BCEN2424_0979BCEN2424_1065
BCEN331271 BCEN_1709BCEN_0498BCEN_0495BCEN_0500BCEN_0586
BCAN483179 BCAN_A1938BCAN_A1228BCAN_A1536BCAN_A0899BCAN_A1608
BBRO257310 BB3910BB3911BB3909BB3912BB3908BB3050
BAMB398577 BAMMC406_0848BAMMC406_2240BAMMC406_0849BAMMC406_0846BAMMC406_0851BAMMC406_0945
BAMB339670 BAMB_0836BAMB_2360BAMB_0837BAMB_0834BAMB_0839BAMB_0941
BABO262698 BRUAB1_1872BRUAB1_1211BRUAB1_1492BRUAB1_0897BRUAB1_1559
ASP76114 EBA7039EBA7041EBA7036EBA7042EBA7034EBA3804
ASP62977 ACIAD2937ACIAD0891ACIAD3596ACIAD0890ACIAD2935ACIAD0114
ASP62928 AZO1366AZO1365AZO1367AZO1363AZO1369AZO3923
ASP232721 AJS_3381AJS_3382AJS_3365AJS_3383AJS_3445AJS_2419
ASAL382245 ASA_2437ASA_2438ASA_2436ASA_2440ASA_2435ASA_2439
APLE434271 APJL_0503APJL_0613APJL_0464APJL_0084APJL_0880APJL_0612
APLE416269 APL_0474APL_0618APL_0438APL_0084APL_0868APL_0617
AHYD196024 AHA_1866AHA_1865AHA_1867AHA_1863AHA_1868AHA_1864
AFER243159 AFE_2655AFE_2653AFE_2657AFE_2652AFE_1102
AEHR187272 MLG_1711MLG_1712MLG_1710MLG_0248MLG_1699
ACAU438753 AZC_0096AZC_2527AZC_1148AZC_1739AZC_0032
ABOR393595 ABO_1291ABO_1290ABO_1292ABO_1289ABO_1294
ABAU360910 BAV2694BAV2695BAV2692BAV2696BAV2685BAV2006
ABAC204669 ACID345_1574ACID345_1757ACID345_2614ACID345_1337ACID345_0391
AAVE397945 AAVE_3425AAVE_3426AAVE_1873AAVE_3427AAVE_3767AAVE_3320


Organism features enriched in list (features available for 209 out of the 223 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00030131992
Disease:Brucellosis 0.005740255
Disease:Bubonic_plague 0.002026066
Disease:Dysentery 0.002026066
Disease:Gastroenteritis 0.00241451013
Endospores:No 1.499e-1336211
GC_Content_Range4:0-40 2.982e-3314213
GC_Content_Range4:40-60 4.031e-9113224
GC_Content_Range4:60-100 2.145e-982145
GC_Content_Range7:30-40 7.607e-2114166
GC_Content_Range7:50-60 2.779e-1067107
GC_Content_Range7:60-70 5.314e-1282134
Genome_Size_Range5:0-2 8.873e-267155
Genome_Size_Range5:2-4 0.000382153197
Genome_Size_Range5:4-6 2.055e-23120184
Genome_Size_Range5:6-10 0.00010752947
Genome_Size_Range9:1-2 3.300e-197128
Genome_Size_Range9:2-3 0.000419428120
Genome_Size_Range9:4-5 1.009e-96196
Genome_Size_Range9:5-6 7.617e-115988
Genome_Size_Range9:6-8 4.355e-62738
Gram_Stain:Gram_Neg 2.973e-45195333
Habitat:Multiple 0.000793280178
Habitat:Specialized 0.0000915753
Motility:No 2.063e-1319151
Motility:Yes 5.414e-11133267
Optimal_temp.:25-30 1.291e-61719
Optimal_temp.:35-37 1.263e-61313
Oxygen_Req:Aerobic 0.003045080185
Oxygen_Req:Anaerobic 1.526e-146102
Oxygen_Req:Facultative 8.898e-8101201
Pathogenic_in:Plant 0.00262321115
Shape:Coccobacillus 0.00001061111
Shape:Coccus 3.453e-61282
Shape:Rod 5.794e-16169347
Shape:Sphere 0.0020471119
Shape:Spiral 0.0002130334
Temp._range:Mesophilic 0.0009521183473
Temp._range:Psychrophilic 0.001463389
Temp._range:Thermophilic 2.108e-6135



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 166
Effective number of orgs (counting one per cluster within 468 clusters): 125

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17401
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TSP28240 Thermotoga sp.1
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TMAR243274 ncbi Thermotoga maritima MSB81
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TERY203124 ncbi Trichodesmium erythraeum IMS1010
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP1148 ncbi Synechocystis sp. PCC 68030
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPNE488221 ncbi Streptococcus pneumoniae 705851
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-61
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-141
SPNE171101 ncbi Streptococcus pneumoniae R61
SPNE170187 ncbi Streptococcus pneumoniae G541
SPNE1313 Streptococcus pneumoniae1
SMUT210007 ncbi Streptococcus mutans UA1591
SMAR399550 ncbi Staphylothermus marinus F10
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SELO269084 ncbi Synechococcus elongatus PCC 63011
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RALB246199 Ruminococcus albus 81
PTOR263820 ncbi Picrophilus torridus DSM 97900
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR74547 ncbi Prochlorococcus marinus MIT 93131
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
NSP103690 ncbi Nostoc sp. PCC 71201
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LSPH444177 ncbi Lysinibacillus sphaericus C3-411
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S851
FSP106370 ncbi Frankia sp. CcI31
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
FALN326424 ncbi Frankia alni ACN14a1
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DETH243164 ncbi Dehalococcoides ethenogenes 1951
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CCON360104 ncbi Campylobacter concisus 138261
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4001
BTUR314724 ncbi Borrelia turicatae 91E1350
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B310
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40181
AAUR290340 ncbi Arthrobacter aurescens TC11
AAEO224324 ncbi Aquifex aeolicus VF51


Names of the homologs of the genes in the group in each of these orgs
  G6465   G6464   EG12690   EG11032   EG10947   EG10547   
WSUC273121 WS0872
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TSP28240 TRQ2_1450
TPET390874 TPET_1404
TPEN368408
TPAL243276 TP_0999
TMAR243274 TM_1379
TKOD69014
TERY203124
TDEN326298
TACI273075
STOK273063
SSUI391296 SSU98_1792
SSUI391295
SSP1148
SSOL273057
SSAP342451 SSP0009
SPYO370554 MGAS10750_SPY1542
SPYO370552 MGAS10270_SPY1550
SPYO319701 M28_SPY1472
SPYO198466 SPYM3_1516
SPYO193567 SPS0350
SPYO186103 SPYM18_1814
SPNE488221 SP70585_0482
SPNE487214 SPH_0519
SPNE487213 SPT_0448
SPNE171101 SPR0372
SPNE170187 SPN06024
SPNE1313 SPJ_0398
SMUT210007 SMU_1886
SMAR399550
SHAE279808 SH0008
SEPI176280 SE_0007
SEPI176279 SERP2545
SELO269084 SYC0901_C
SAUR93062 SACOL0009
SAUR93061 SAOUHSC_00009
SAUR426430 NWMN_0008
SAUR418127 SAHV_0009
SAUR367830 SAUSA300_0009
SAUR359787 SAURJH1_0009
SAUR359786 SAURJH9_0009
SAUR282459 SAS0009
SAUR282458 SAR0009
SAUR273036 SAB0009
SAUR196620 MW0009
SAUR158879 SA0009
SAUR158878 SAV0009
SAGA211110 GBS0343
SAGA208435 SAG_0356
SAGA205921 SAK_0430
SACI330779
RALB246199 GRAORF_2024
PTOR263820
PMOB403833 PMOB_0102
PMAR74547 PMT1618
PMAR167542 P9515ORF_1374
PISL384616
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PABY272844
NSP103690 ALR2204
NPHA348780 NP2680A
MTHE349307
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM0865
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBAR269797
MART243272
MAEO419665
MACE188937
LSPH444177 BSPH_0023
LJOH257314 LJ_0676
LINT267671 LIC_11470
LINT189518 LA2494
LGAS324831 LGAS_1621
LDEL390333 LDB1882
LDEL321956 LBUL_1748
LBOR355277 LBJ_1491
LBOR355276 LBL_1715
IHOS453591
HWAL362976 HQ1652A
HSP64091 VNG1259G
HSAL478009 OE2805R
HPYL85963
HPYL357544
HPY
HMUK485914 HMUK_2414
HMAR272569 RRNAC1129
HHEP235279
HBUT415426
HACI382638
FSUC59374 FSU1748
FSP106370 FRANCCI3_4536
FNOD381764 FNOD_1518
FALN326424 FRAAL6872
DSP255470 CBDBA1249
DSP216389 DEHABAV1_1119
DETH243164 DET_1309
CTRA471473 CTLON_0350
CTRA471472 CTL0354
CSUL444179
CPNE182082 CPB0322
CPNE138677 CPJ0314
CPNE115713 CPN0314
CPNE115711 CP_0444
CMUR243161 TC_0375
CMET456442
CMAQ397948
CKOR374847
CJEJ407148 C8J_0823
CJEJ360109
CJEJ354242 CJJ81176_0893
CJEJ195099
CJEJ192222 CJ0886C
CHOM360107
CFEL264202 CF0539
CCON360104 CCC13826_0773
CCAV227941 CCA_00468
CABO218497 CAB454
BXEN266265 BXE_B0870
BTUR314724
BHER314723
BGAR290434
BBUR224326
BAFZ390236
AYEL322098
AURANTIMONAS
APER272557
ALAI441768 ACL_0009
AFUL224325
ABUT367737 ABU_1159
AAUR290340 AAUR_PTC20059
AAEO224324 AQ_298


Organism features enriched in list (features available for 158 out of the 166 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.001905779
Arrangment:Clusters 1.436e-71517
Disease:Leptospirosis 0.005245944
Disease:Pharyngitis 0.000025588
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 4.461e-71111
Disease:bronchitis_and_pneumonitis 0.000025588
Endospores:No 8.244e-27113211
Endospores:Yes 4.615e-7153
GC_Content_Range4:0-40 1.079e-1193213
GC_Content_Range4:60-100 3.064e-1111145
GC_Content_Range7:0-30 0.00321272147
GC_Content_Range7:30-40 3.017e-872166
GC_Content_Range7:50-60 0.000027213107
GC_Content_Range7:60-70 3.037e-119134
Genome_Size_Range5:0-2 1.551e-2290155
Genome_Size_Range5:4-6 2.237e-199184
Genome_Size_Range5:6-10 0.0008631447
Genome_Size_Range9:0-1 2.218e-72027
Genome_Size_Range9:1-2 2.281e-1470128
Genome_Size_Range9:2-3 0.000445047120
Genome_Size_Range9:3-4 0.0000956877
Genome_Size_Range9:4-5 2.253e-8696
Genome_Size_Range9:5-6 5.638e-10388
Genome_Size_Range9:6-8 0.0020997338
Gram_Stain:Gram_Neg 1.687e-1253333
Habitat:Host-associated 0.000040576206
Habitat:Multiple 1.764e-822178
Habitat:Specialized 0.00019332653
Habitat:Terrestrial 0.0030039231
Motility:No 9.023e-764151
Optimal_temp.:- 0.000076150257
Optimal_temp.:30-37 7.077e-61418
Optimal_temp.:37 0.008271338106
Optimal_temp.:85 0.005245944
Oxygen_Req:Aerobic 0.000037731185
Oxygen_Req:Anaerobic 0.000275142102
Oxygen_Req:Microaerophilic 0.00680471018
Pathogenic_in:Swine 0.001395355
Shape:Coccus 2.841e-104782
Shape:Irregular_coccus 1.190e-101717
Shape:Rod 1.956e-2935347
Shape:Sphere 1.935e-71619
Shape:Spiral 5.213e-82434
Temp._range:Hyperthermophilic 1.377e-92023
Temp._range:Mesophilic 0.0090753119473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2461930.7188
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002140.7144
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951670.7018
PWY-5918 (heme biosynthesis I)2721980.6794
PWY-4041 (γ-glutamyl cycle)2792000.6742
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181740.6737
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491390.6724
PWY-1269 (CMP-KDO biosynthesis I)3252160.6681
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912030.6633
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251750.6585
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962040.6574
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862000.6560
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392160.6364
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831520.6358
TYRFUMCAT-PWY (tyrosine degradation I)1841520.6322
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901970.6256
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482170.6233
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911520.6073
PWY-5913 (TCA cycle variation IV)3011970.5981
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292040.5784
AST-PWY (arginine degradation II (AST pathway))1201100.5693
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491720.5665
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491720.5665
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761390.5652
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551740.5633
PWY-5148 (acyl-CoA hydrolysis)2271620.5618
PWY-5028 (histidine degradation II)1301140.5559
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911440.5492
P344-PWY (acrylonitrile degradation)2101510.5371
GLUCONSUPER-PWY (D-gluconate degradation)2291590.5349
DAPLYSINESYN-PWY (lysine biosynthesis I)3422010.5288
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351130.5256
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))1381140.5209
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982170.5196
PWY-5386 (methylglyoxal degradation I)3051860.5146
REDCITCYC (TCA cycle variation II)1741310.5128
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001830.5067
PWY-46 (putrescine biosynthesis III)1381110.4967
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3742060.4930
P601-PWY (D-camphor degradation)95860.4843
GALACTCAT-PWY (D-galactonate degradation)104910.4828
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561180.4804
PWY-3162 (tryptophan degradation V (side chain pathway))94850.4804
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222180.4795
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96860.4789
PWY-5084 (2-ketoglutarate dehydrogenase complex)3261880.4780
GALACTITOLCAT-PWY (galactitol degradation)73710.4671
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3651990.4646
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162140.4627
GALACTARDEG-PWY (D-galactarate degradation I)1511130.4606
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81750.4580
GLUCARDEG-PWY (D-glucarate degradation I)1521130.4568
LIPASYN-PWY (phospholipases)2121400.4531
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112920.4526
VALDEG-PWY (valine degradation I)2901710.4511
PWY-6087 (4-chlorocatechol degradation)2231440.4482
KDOSYN-PWY (KDO transfer to lipid IVA I)1801250.4474
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111780.4465
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791240.4434
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94810.4430
PWY-5340 (sulfate activation for sulfonation)3852020.4423
PWY-2361 (3-oxoadipate degradation)82740.4422
PWY-5188 (tetrapyrrole biosynthesis I)4392170.4394
PWY0-862 (cis-dodecenoyl biosynthesis)3431880.4390
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation)2121370.4319
PWY0-501 (lipoate biosynthesis and incorporation I)3852000.4286
PWY0-981 (taurine degradation IV)106860.4282
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)1351010.4281
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891670.4267
POLYISOPRENSYN-PWY (polyisoprenoid biosynthesis (E. coli))116910.4256
PWY-1501 (mandelate degradation I)73670.4255
GLUT-REDOX-PWY (glutathione redox reactions II)2461500.4243
PWY-6193 (3-chlorocatechol degradation II (ortho))1941270.4162
1CMET2-PWY (formylTHF biosynthesis I)3691930.4151
PWY-561 (superpathway of glyoxylate cycle)1621120.4123
GLYOXYLATE-BYPASS (glyoxylate cycle)1691150.4105
PWY0-1353 (succinate to cytochrome bd oxidase electron transfer)1781190.4098
PWY-5938 ((R)-acetoin biosynthesis I)3761940.4067
PWY1-3 (polyhydroxybutyrate biosynthesis)115880.4042



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G6464   EG12690   EG11032   EG10947   EG10547   
G64650.9998210.9998250.9996070.9996720.99909
G64640.9996460.9995360.9992880.999145
EG126900.999320.9996030.998873
EG110320.9992710.999181
EG109470.998685
EG10547



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PAIRWISE BLAST SCORES:

  G6465   G6464   EG12690   EG11032   EG10947   EG10547   
G64650.0f0-----
G6464-0.0f0----
EG12690--0.0f0---
EG11032---0.0f0--
EG10947----0.0f0-
EG10547-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10547 EG10947 EG11032 EG12690 G6464 G6465 (centered at G6465)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6465   G6464   EG12690   EG11032   EG10947   EG10547   
188/623370/623402/623399/623405/623201/623
AAEO224324:0:Tyes----0-
AAUR290340:0:Tyes---0--
AAVE397945:0:Tyes152515260152718571423
ABAC204669:0:Tyes1190137222399530-
ABAU360910:0:Tyes6926936906946850
ABOR393595:0:Tyes21305-
ABUT367737:0:Tyes-0----
ACAU438753:0:Tyes-642525113017290
ACEL351607:0:Tyes--0815--
ACRY349163:8:Tyes-21602288796-
ADEH290397:0:Tyes--03255--
AEHR187272:0:Tyes14541455145301442-
AFER243159:0:Tyes1532-1530153315290
AHYD196024:0:Tyes324051
ALAI441768:0:Tyes----0-
AMAR234826:0:Tyes-0-135--
AMAR329726:9:Tyes--199028210-
AMET293826:0:Tyes-25872373-0-
ANAE240017:0:Tyes--081--
AORE350688:0:Tyes-1526--0-
APHA212042:0:Tyes-287-0--
APLE416269:0:Tyes3935353570786534
APLE434271:0:Tno4025013650763500
ASAL382245:5:Tyes231504
ASP1667:3:Tyes--20830--
ASP232721:2:Tyes9329339189349910
ASP62928:0:Tyes324062589
ASP62977:0:Tyes2630731323173026280
ASP76114:2:Tyes188918901888189218860
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