CANDIDATE ID: 430

CANDIDATE ID: 430

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9965527e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG11406 (ribC) (b1662)
   Products of gene:
     - RIBOFLAVIN-SYN-MONOMER (RibC)
     - CPLX0-3952 (riboflavin synthase)
       Reactions:
        2 6,7-dimethyl-8-(1-D-ribityl)lumazine + H+  ->  5-amino-6-(D-ribitylamino)uracil + riboflavin
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))
         PWY-6167 (PWY-6167)
         PWY-6168 (PWY-6168)

- EG11331 (ribA) (b1277)
   Products of gene:
     - GTP-CYCLOHYDRO-II-MONOMER (GTP cyclohydrolase II)
     - GTP-CYCLOHYDRO-II-CPLX (GTP cyclohydrolase II)
       Reactions:
        GTP + 3 H2O  ->  diphosphate + 2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one + formate + 2 H+
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))
         PWY-6168 (PWY-6168)

- EG11322 (ribE) (b0415)
   Products of gene:
     - LUMAZINESYN-MONOMER (RibE)
     - LUMAZINESYN-CPLX (6,7-dimethyl-8-ribityllumazine synthase)
       Reactions:
        5-amino-6-(D-ribitylamino)uracil + 1-deoxy-L-glycero-tetrulose 4-phosphate  ->  6,7-dimethyl-8-(1-D-ribityl)lumazine + phosphate + 2 H2O + H+
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))
         PWY-6167 (PWY-6167)
         PWY-6168 (PWY-6168)

- EG11321 (ribD) (b0414)
   Products of gene:
     - RIBOFLAVINSYNDEAM-MONOMER (fused diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase)
     - CPLX0-7659 (fused diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase)
       Reactions:
        2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one + H2O  ->  5-amino-6-(5'-phosphoribosylamino)uracil + ammonia
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))
        5-amino-6-(5'-phosphoribosylamino)uracil + NADPH + H+  ->  5-amino-6-(5-phospho-D-ribosylamino)uracil + NADP+
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))

- EG10666 (nusB) (b0416)
   Products of gene:
     - EG10666-MONOMER (transcription antitermination protein NusB)
     - CPLX0-7879 (NusB-NusE complex)

- EG10465 (ribB) (b3041)
   Products of gene:
     - DIOHBUTANONEPSYN-MONOMER (3,4-dihydroxy-2-butanone 4-phosphate synthase)
     - DIOHBUTANONEPSYN-CPLX (3,4-dihydroxy-2-butanone 4-phosphate synthase)
       Reactions:
        D-ribulose-5-phosphate  ->  1-deoxy-L-glycero-tetrulose 4-phosphate + formate + H+
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))
         PWY-6167 (PWY-6167)
         PWY-6168 (PWY-6168)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 276
Effective number of orgs (counting one per cluster within 468 clusters): 186

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola6
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1146
VEIS391735 ncbi Verminephrobacter eiseniae EF01-25
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TTUR377629 ncbi Teredinibacter turnerae T79016
TSP1755 Thermoanaerobacter sp.6
TROS309801 ncbi Thermomicrobium roseum DSM 51595
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332236
TCRU317025 ncbi Thiomicrospira crunogena XCL-25
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen6
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
SSP94122 ncbi Shewanella sp. ANA-36
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB36
SPRO399741 ncbi Serratia proteamaculans 5686
SPNE488221 ncbi Streptococcus pneumoniae 705855
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-65
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-145
SPNE171101 ncbi Streptococcus pneumoniae R65
SPNE170187 ncbi Streptococcus pneumoniae G545
SPNE1313 Streptococcus pneumoniae5
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SONE211586 ncbi Shewanella oneidensis MR-16
SLOI323850 ncbi Shewanella loihica PV-46
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB6
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23386
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SELO269084 ncbi Synechococcus elongatus PCC 63015
SDYS300267 ncbi Shigella dysenteriae Sd1976
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-406
SCO ncbi Streptomyces coelicolor A3(2)5
SBOY300268 ncbi Shigella boydii Sb2276
SBAL402882 ncbi Shewanella baltica OS1856
SBAL399599 ncbi Shewanella baltica OS1956
SACI56780 ncbi Syntrophus aciditrophicus SB6
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99415
RSP101510 ncbi Rhodococcus jostii RHA15
RMET266264 ncbi Ralstonia metallidurans CH345
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
PTHE370438 ncbi Pelotomaculum thermopropionicum SI6
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP56811 Psychrobacter sp.6
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PPRO298386 ncbi Photobacterium profundum SS96
PMUL272843 ncbi Pasteurella multocida multocida Pm706
PMEN399739 ncbi Pseudomonas mendocina ymp6
PMAR93060 ncbi Prochlorococcus marinus MIT 92155
PMAR74546 ncbi Prochlorococcus marinus MIT 93125
PMAR167546 ncbi Prochlorococcus marinus MIT 93015
PMAR167542 ncbi Prochlorococcus marinus MIT 95155
PMAR167540 Prochlorococcus marinus pastoris MED4ax5
PMAR146891 ncbi Prochlorococcus marinus AS96015
PLUT319225 ncbi Chlorobium luteolum DSM 2736
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PCRY335284 ncbi Psychrobacter cryohalolentis K56
PCAR338963 ncbi Pelobacter carbinolicus DSM 23806
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PARC259536 ncbi Psychrobacter arcticus 273-46
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
NSP35761 Nocardioides sp.5
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534426
NMEN272831 ncbi Neisseria meningitidis FAM186
NMEN122587 ncbi Neisseria meningitidis Z24916
NMEN122586 ncbi Neisseria meningitidis MC586
NGON242231 ncbi Neisseria gonorrhoeae FA 10906
NFAR247156 ncbi Nocardia farcinica IFM 101525
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
MXAN246197 ncbi Myxococcus xanthus DK 16226
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-15
MTHE264732 ncbi Moorella thermoacetica ATCC 390736
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E6
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK5
MFLA265072 ncbi Methylobacillus flagellatus KT6
MCAP243233 ncbi Methylococcus capsulatus Bath6
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P25
MBOV233413 ncbi Mycobacterium bovis AF2122/975
MAVI243243 ncbi Mycobacterium avium 1045
MAQU351348 ncbi Marinobacter aquaeolei VT86
LPNE400673 ncbi Legionella pneumophila Corby5
LPNE297246 ncbi Legionella pneumophila Paris5
LPNE297245 ncbi Legionella pneumophila Lens5
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 15
LCHO395495 ncbi Leptothrix cholodnii SP-65
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille5
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HSOM228400 ncbi Haemophilus somnus 23366
HSOM205914 ncbi Haemophilus somnus 129PT6
HMOD498761 ncbi Heliobacterium modesticaldum Ice16
HINF71421 ncbi Haemophilus influenzae Rd KW206
HINF374930 ncbi Haemophilus influenzae PittEE6
HINF281310 ncbi Haemophilus influenzae 86-028NP6
HHAL349124 ncbi Halorhodospira halophila SL15
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23966
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237796
HARS204773 ncbi Herminiimonas arsenicoxydans5
GURA351605 ncbi Geobacter uraniireducens Rf46
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GSUL243231 ncbi Geobacter sulfurreducens PCA6
GMET269799 ncbi Geobacter metallireducens GS-156
GKAU235909 ncbi Geobacillus kaustophilus HTA4266
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-005
FTUL418136 ncbi Francisella tularensis tularensis WY96-34185
FTUL401614 ncbi Francisella novicida U1125
FTUL393115 ncbi Francisella tularensis tularensis FSC1985
FTUL393011 ncbi Francisella tularensis holarctica OSU185
FTUL351581 Francisella tularensis holarctica FSC2005
FRANT ncbi Francisella tularensis tularensis SCHU S45
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250175
ESP42895 Enterobacter sp.6
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough6
DSP255470 ncbi Dehalococcoides sp. CBDB16
DSP216389 ncbi Dehalococcoides sp. BAV16
DRED349161 ncbi Desulfotomaculum reducens MI-16
DPSY177439 ncbi Desulfotalea psychrophila LSv546
DOLE96561 ncbi Desulfococcus oleovorans Hxd36
DNOD246195 ncbi Dichelobacter nodosus VCS1703A5
DHAF138119 ncbi Desulfitobacterium hafniense Y516
DETH243164 ncbi Dehalococcoides ethenogenes 1956
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G206
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124726
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA5
CTET212717 ncbi Clostridium tetani E886
CTEP194439 ncbi Chlorobium tepidum TLS5
CSAL290398 ncbi Chromohalobacter salexigens DSM 30436
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)5
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE255
CPER289380 ncbi Clostridium perfringens SM1015
CPER195103 ncbi Clostridium perfringens ATCC 131245
CPER195102 ncbi Clostridium perfringens 135
CNOV386415 ncbi Clostridium novyi NT6
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3825
CKLU431943 ncbi Clostridium kluyveri DSM 5555
CJAP155077 Cellvibrio japonicus6
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29016
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C6
CCHL340177 ncbi Chlorobium chlorochromatii CaD36
CCAV227941 ncbi Chlamydophila caviae GPIC5
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1116
CBUR360115 ncbi Coxiella burnetii RSA 3316
CBUR227377 ncbi Coxiella burnetii RSA 4936
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto6
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6576
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B5
CBOT498213 ncbi Clostridium botulinum B1 str. Okra6
CBOT441772 ncbi Clostridium botulinum F str. Langeland6
CBOT441771 ncbi Clostridium botulinum A str. Hall6
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193976
CBOT36826 Clostridium botulinum A6
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN6
CBLO203907 ncbi Candidatus Blochmannia floridanus6
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80525
CACE272562 ncbi Clostridium acetobutylicum ATCC 8245
BWEI315730 ncbi Bacillus weihenstephanensis KBAB46
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTHU412694 ncbi Bacillus thuringiensis Al Hakam6
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-276
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUB ncbi Bacillus subtilis subtilis 1685
BSP36773 Burkholderia sp.6
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)6
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233445
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BHAL272558 ncbi Bacillus halodurans C-1255
BCLA66692 ncbi Bacillus clausii KSM-K166
BCIC186490 Candidatus Baumannia cicadellinicola6
BCER572264 ncbi Bacillus cereus 03BB1026
BCER405917 Bacillus cereus W6
BCER315749 ncbi Bacillus cytotoxicus NVH 391-986
BCER288681 ncbi Bacillus cereus E33L6
BCER226900 ncbi Bacillus cereus ATCC 145796
BCEN331272 ncbi Burkholderia cenocepacia HI24246
BCEN331271 ncbi Burkholderia cenocepacia AU 10546
BBRO257310 ncbi Bordetella bronchiseptica RB505
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)6
BANT592021 ncbi Bacillus anthracis A02486
BANT568206 ncbi Bacillus anthracis CDC 6846
BANT261594 ncbi Bacillus anthracis Ames Ancestor6
BANT260799 ncbi Bacillus anthracis Sterne6
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
ASP76114 ncbi Aromatoleum aromaticum EbN16
ASP62977 ncbi Acinetobacter sp. ADP16
ASP62928 ncbi Azoarcus sp. BH725
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AHYD196024 Aeromonas hydrophila dhakensis6
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C6
ABOR393595 ncbi Alcanivorax borkumensis SK25
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455
AAVE397945 ncbi Acidovorax citrulli AAC00-15
AAEO224324 ncbi Aquifex aeolicus VF55


Names of the homologs of the genes in the group in each of these orgs
  EG11406   EG11331   EG11322   EG11321   EG10666   EG10465   
YPSE349747 YPSIP31758_1751YPSIP31758_1919YPSIP31758_3116YPSIP31758_3117YPSIP31758_3115YPSIP31758_0567
YPSE273123 YPTB2304YPTB2144YPTB0935YPTB0934YPTB0936YPTB3404
YPES386656 YPDSF_0756YPDSF_0912YPDSF_2817YPDSF_2818YPDSF_2816YPDSF_0441
YPES377628 YPN_1845YPN_1690YPN_0906YPN_0905YPN_0907YPN_0517
YPES360102 YPA_1736YPA_1581YPA_2676YPA_2677YPA_2675YPA_3133
YPES349746 YPANGOLA_A2577YPANGOLA_A2231YPANGOLA_A3164YPANGOLA_A3163YPANGOLA_A3165YPANGOLA_A0289
YPES214092 YPO2391YPO2222YPO3182YPO3183YPO3181YPO0658
YPES187410 Y1946Y2064Y1001Y1000Y1002Y3520
YENT393305 YE2162YE1965YE3160YE3161YE3159YE3669
XORY360094 XOOORF_1046XOOORF_1048XOOORF_1043XOOORF_1049XOOORF_1047
XORY342109 XOO3633XOO3631XOO3635XOO3630XOO3632
XORY291331 XOO3854XOO3852XOO3856XOO3851XOO3853
XFAS405440 XFASM12_1907XFASM12_1905XFASM12_1908XFASM12_1904XFASM12_1906
XFAS183190 PD_1746PD_1744PD_1747PD_1743PD_1745
XFAS160492 XF0952XF0954XF0950XF0955XF0953
XCAM487884 XCC-B100_3660XCC-B100_3658XCC-B100_3664XCC-B100_3657XCC-B100_3659
XCAM316273 XCAORF_0859XCAORF_0861XCAORF_0857XCAORF_0862XCAORF_0860
XCAM314565 XC_3539XC_3537XC_3541XC_3536XC_3538
XCAM190485 XCC0695XCC0697XCC0693XCC0698XCC0696
XAXO190486 XAC0748XAC0750XAC0746XAC0751XAC0749
VVUL216895 VV1_2560VV2_1180VV1_0319VV1_0323VV1_0318VV2_1426
VVUL196600 VV1729VVA0006VV0864VV0861VV0865VVA0260
VPAR223926 VP1480VPA0006VP0682VP0679VP0683VPA1250
VFIS312309 VF1414VF1189VF0703VF0700VF0704VF0702
VEIS391735 VEIS_4434VEIS_4792VEIS_2821VEIS_4793VEIS_4791
VCHO345073 VC0395_A1860VC0395_A0882VC0395_A1858VC0395_A1861VC0395_A1857VC0395_0181
VCHO VC2270VC1263VC2268VC2271VC2267VCA1060
TTUR377629 TERTU_3703TERTU_3696TERTU_3701TERTU_3704TERTU_3700TERTU_3702
TSP1755 TETH514_0021TETH514_0022TETH514_0023TETH514_0020TETH514_1534TETH514_0022
TROS309801 TRD_0503TRD_0504TRD_0505TRD_0502TRD_1619
TPSE340099 TETH39_0022TETH39_0023TETH39_0024TETH39_0021TETH39_1097TETH39_0023
TCRU317025 TCR_1399TCR_1397TCR_1400TCR_1396TCR_1398
SWOL335541 SWOL_1221SWOL_1220SWOL_1219SWOL_1222SWOL_0564SWOL_1220
STYP99287 STM1426STM1711STM0417STM0416STM0418STM3195
SSP94122 SHEWANA3_2040SHEWANA3_2600SHEWANA3_1099SHEWANA3_1096SHEWANA3_1100SHEWANA3_0134
SSON300269 SSO_1494SSO_1863SSO_0392SSO_0391SSO_0393SSO_3178
SSED425104 SSED_2118SSED_1603SSED_1276SSED_1273SSED_1277SSED_4372
SPRO399741 SPRO_2190SPRO_2653SPRO_1073SPRO_1072SPRO_1074SPRO_4286
SPNE488221 SP70585_0240SP70585_0239SP70585_0238SP70585_0241SP70585_0502
SPNE487214 SPH_0280SPH_0279SPH_0278SPH_0281SPH_0539
SPNE487213 SPT_0214SPT_0213SPT_0212SPT_0215SPT_0468
SPNE171101 SPR0163SPR0162SPR0161SPR0164SPR0390
SPNE170187 SPN08034SPN08033SPN08032SPN08035SPN06049
SPNE1313 SPJ_0194SPJ_0193SPJ_0192SPJ_0195SPJ_0417
SPEA398579 SPEA_2267SPEA_2616SPEA_1165SPEA_1162SPEA_1166SPEA_0131
SONE211586 SO_2296SO_2831SO_3466SO_3469SO_3465SO_0142
SLOI323850 SHEW_2036SHEW_2446SHEW_1190SHEW_1187SHEW_1191SHEW_0040
SHIGELLA RIBERIBARIBHRIBDNUSBRIBB
SHAL458817 SHAL_2017SHAL_2689SHAL_1208SHAL_1205SHAL_1209SHAL_4187
SGLO343509 SG1439SG1410SG0652SG0651SG0653SG0263
SFUM335543 SFUM_1379SFUM_1380SFUM_1381SFUM_1378SFUM_1382SFUM_1380
SFLE373384 SFV_1684SFV_1290SFV_0380SFV_0379SFV_0381SFV_3085
SFLE198214 AAN43269.1AAN42893.1AAN42010.1AAN42009.1AAN42011.1AAN44559.1
SERY405948 SACE_2122SACE_2123SACE_2124SACE_2887SACE_2076SACE_2123
SENT454169 SEHA_C1559SEHA_C1898SEHA_C0519SEHA_C0518SEHA_C0520SEHA_C3446
SENT321314 SCH_1445SCH_1706SCH_0458SCH_0457SCH_0459SCH_3141
SENT295319 SPA1427SPA1165SPA2306SPA2307SPA2305SPA3063
SENT220341 STY1696STY1340STY0456STY0455STY0457STY3373
SENT209261 T1294T1624T2446T2447T2445T3115
SELO269084 SYC0082_CSYC0124_DSYC1854_DSYC1308_DSYC0124_D
SDYS300267 SDY_1888SDY_1353SDY_0319SDY_0320SDY_0318SDY_3226
SDEN318161 SDEN_1703SDEN_1447SDEN_1147SDEN_1144SDEN_1148SDEN_1146
SDEG203122 SDE_3457SDE_3450SDE_3455SDE_3458SDE_3454SDE_3456
SCO SCO1443SCO1441SCO1440SCO2688SCO1441
SBOY300268 SBO_1469SBO_1787SBO_0309SBO_0308SBO_0310SBO_2899
SBAL402882 SHEW185_2225SHEW185_1653SHEW185_3155SHEW185_3159SHEW185_3154SHEW185_0134
SBAL399599 SBAL195_2333SBAL195_1690SBAL195_3300SBAL195_3303SBAL195_3299SBAL195_0139
SACI56780 SYN_02370SYN_02371SYN_02372SYN_00578SYN_02373SYN_02371
RXYL266117 RXYL_1365RXYL_1366RXYL_1367RXYL_1364RXYL_1366
RSP101510 RHA1_RO07169RHA1_RO07170RHA1_RO07171RHA1_RO07168RHA1_RO07146
RMET266264 RMET_0194RMET_2694RMET_2688RMET_2695RMET_4758
REUT381666 H16_B1576H16_A2855H16_A2848H16_A2856H16_B1223
REUT264198 REUT_B4241REUT_A0769REUT_A0776REUT_A0768REUT_B4029
PTHE370438 PTH_1760PTH_1759PTH_1758PTH_1761PTH_1179PTH_1759
PSYR223283 PSPTO_0691PSPTO_0696PSPTO_0693PSPTO_0690PSPTO_0694PSPTO_0692
PSYR205918 PSYR_4461PSYR_4456PSYR_4459PSYR_4462PSYR_4458PSYR_4460
PSTU379731 PST_0836PST_0843PST_0838PST_0835PST_0839PST_0837
PSP56811 PSYCPRWF_2384PSYCPRWF_0410PSYCPRWF_2285PSYCPRWF_2385PSYCPRWF_2284PSYCPRWF_0256
PSP312153 PNUC_0271PNUC_0265PNUC_0270PNUC_0264PNUC_0266
PPUT76869 PPUTGB1_2867PPUTGB1_0568PPUTGB1_0563PPUTGB1_0560PPUTGB1_0564PPUTGB1_0575
PPUT351746 PPUT_2775PPUT_0557PPUT_0552PPUT_0549PPUT_0553PPUT_0564
PPUT160488 PP_2916PP_0522PP_0517PP_0514PP_0518PP_0530
PPRO298386 PBPRA2176PBPRB1461PBPRA0800PBPRA0797PBPRA0801PBPRB0898
PMUL272843 PM0650PM0677PM0731PM0749PM0730PM1385
PMEN399739 PMEN_3856PMEN_3848PMEN_3854PMEN_3857PMEN_3853PMEN_3855
PMAR93060 P9215_05211P9215_09991P9215_19161P9215_14901P9215_09991
PMAR74546 PMT9312_0441PMT9312_0907PMT9312_1735PMT9312_1359PMT9312_0907
PMAR167546 P9301ORF_0477P9301ORF_0984P9301ORF_1873P9301ORF_1474P9301ORF_0984
PMAR167542 P9515ORF_0539P9515ORF_1023P9515ORF_1915P9515ORF_1489P9515ORF_1023
PMAR167540 PMM0442PMM0893PMM1643PMM1265PMM0893
PMAR146891 A9601_04971A9601_09681A9601_18521A9601_14641A9601_09681
PLUT319225 PLUT_0731PLUT_1591PLUT_1989PLUT_0727PLUT_1679PLUT_1591
PLUM243265 PLU2610PLU2431PLU3898PLU3899PLU3897PLU3963
PING357804 PING_3144PING_1443PING_1440PING_1444PING_1442
PHAL326442 PSHAA1734PSHAA2371PSHAA2374PSHAA2370PSHAA1233
PFLU220664 PFL_5521PFL_5514PFL_5519PFL_5522PFL_5518PFL_5520
PFLU216595 PFLU5472PFLU5466PFLU5470PFLU5473PFLU5469PFLU5471
PFLU205922 PFL_5018PFL_5011PFL_5016PFL_5019PFL_5015PFL_5017
PENT384676 PSEEN0589PSEEN0596PSEEN0591PSEEN0588PSEEN0592PSEEN0609
PCRY335284 PCRYO_2469PCRYO_0244PCRYO_2392PCRYO_2470PCRYO_2393PCRYO_0102
PCAR338963 PCAR_1446PCAR_1447PCAR_1448PCAR_1445PCAR_1449PCAR_0884
PATL342610 PATL_1312PATL_3961PATL_1314PATL_1311PATL_1315PATL_1313
PARC259536 PSYC_2140PSYC_0220PSYC_2069PSYC_2141PSYC_2070PSYC_0093
PAER208964 PA4055PA4047PA4053PA4056PA4052PA4054
PAER208963 PA14_11410PA14_11510PA14_11430PA14_11400PA14_11450PA14_11420
NSP35761 NOCA_2448NOCA_2449NOCA_2450NOCA_2447NOCA_2449
NOCE323261 NOC_2024NOC_0802NOC_2025NOC_0803NOC_2023
NMUL323848 NMUL_A0009NMUL_A0011NMUL_A0006NMUL_A0012NMUL_A0010
NMEN374833 NMCC_1128NMCC_1137NMCC_0641NMCC_0411NMCC_0640NMCC_1139
NMEN272831 NMC1148NMC1155NMC0635NMC0403NMC0634NMC1157
NMEN122587 NMA1416NMA1425NMA0886NMA0644NMA0885NMA1429
NMEN122586 NMB_1247NMB_1254NMB_0684NMB_1817NMB_0683NMB_1256
NGON242231 NGO0755NGO1134NGO0257NGO0089NGO0256NGO0704
NFAR247156 NFA36010NFA36000NFA35990NFA36310NFA36000
NEUR228410 NE2555NE2557NE0793NE2558NE2556
MXAN246197 MXAN_4763MXAN_4213MXAN_4762MXAN_4764MXAN_4761MXAN_3410
MVAN350058 MVAN_2693MVAN_2694MVAN_2695MVAN_2690MVAN_2652
MTHE264732 MOTH_0916MOTH_0917MOTH_0918MOTH_0915MOTH_1521MOTH_0917
MSUC221988 MS1313MS1533MS0976MS1374MS0975MS0172
MGIL350054 MFLV_3721MFLV_3719MFLV_3718MFLV_3727MFLV_3751
MFLA265072 MFLA_2097MFLA_1358MFLA_0492MFLA_1915MFLA_0493MFLA_2098
MCAP243233 MCA_1865MCA_2476MCA_1655MCA_1658MCA_1654MCA_1656
MBOV410289 BCG_1473BCG_1476BCG_1477BCG_1470BCG_2555C
MBOV233413 MB1447MB1450MB1451MB1444MB2562C
MAVI243243 MAV_3366MAV_3365MAV_3364MAV_3368MAV_3410
MAQU351348 MAQU_1940MAQU_2439MAQU_0845MAQU_0843MAQU_0846MAQU_0844
LPNE400673 LPC_0645LPC_0646LPC_0647LPC_2565LPC_0646
LPNE297246 LPP1181LPP1182LPP1183LPP0793LPP1182
LPNE297245 LPL1187LPL1188LPL1189LPL0764LPL1188
LPNE272624 LPG1178LPG1179LPG1180LPG0727LPG1179
LCHO395495 LCHO_2113LCHO_2489LCHO_2934LCHO_2937LCHO_0855
KPNE272620 GKPORF_B1099GKPORF_B0294GKPORF_B4695GKPORF_B4694GKPORF_B4696GKPORF_B2786
JSP375286 MMA_0548MMA_2339MMA_2434MMA_2338MMA_2340
ILOI283942 IL1402IL2142IL1870IL2141IL1869
HSOM228400 HSM_1281HSM_1520HSM_1299HSM_1534HSM_1300HSM_1983
HSOM205914 HS_0812HS_1043HS_0830HS_1050HS_0831HS_0089
HMOD498761 HM1_2142HM1_2143HM1_2144HM1_2141HM1_0286HM1_2143
HINF71421 HI_1613HI_0212HI_1303HI_0944HI_1304HI_0764
HINF374930 CGSHIEE_05720CGSHIEE_02170CGSHIEE_05160CGSHIEE_07245CGSHIEE_05155CGSHIEE_08270
HINF281310 NTHI1429NTHI0309NTHI1616NTHI1115NTHI1617NTHI0925
HHAL349124 HHAL_0899HHAL_0897HHAL_0900HHAL_0896HHAL_0898
HDUC233412 HD_1162HD_1163HD_1165HD_1161HD_0435
HCHE349521 HCH_02673HCH_05867HCH_05954HCH_05957HCH_05953HCH_01388
HAUR316274 HAUR_1304HAUR_1306HAUR_1586HAUR_2423HAUR_0751HAUR_1306
HARS204773 HEAR0565HEAR1037HEAR2372HEAR1038HEAR1036
GURA351605 GURA_2182GURA_2181GURA_2180GURA_2183GURA_2179GURA_2181
GTHE420246 GTNG_2223GTNG_2222GTNG_2225GTNG_2328GTNG_2223
GSUL243231 GSU_1689GSU_1690GSU_1691GSU_1688GSU_1692GSU_1690
GMET269799 GMET_1625GMET_1626GMET_1627GMET_1624GMET_1628GMET_1626
GKAU235909 GK2296GK2295GK2294GK2297GK2397GK2295
FTUL458234 FTA_0085FTA_0083FTA_0086FTA_0678FTA_0084
FTUL418136 FTW_1945FTW_1943FTW_1946FTW_0466FTW_1944
FTUL401614 FTN_0113FTN_0111FTN_0114FTN_1384FTN_0112
FTUL393115 FTF1672FTF1674FTF1671FTF1418CFTF1673
FTUL393011 FTH_0073FTH_0071FTH_0074FTH_0644FTH_0072
FTUL351581 FTL_0077FTL_0075FTL_0078FTL_0643FTL_0076
FRANT RIBBRIBHRIBDNUSBRIBA
FPHI484022 FPHI_0714FPHI_0716FPHI_0713FPHI_1303FPHI_0715
ESP42895 ENT638_1784ENT638_2191ENT638_0883ENT638_0882ENT638_0884ENT638_3453
EFER585054 EFER_1382EFER_1677EFER_2610EFER_2611EFER_2609EFER_2990
ECOO157 RIBERIBAZ0516RIBDNUSBRIBB
ECOL83334 ECS2371ECS1850ECS0468ECS0467ECS0469ECS3929
ECOL585397 ECED1_1861ECED1_1487ECED1_0438ECED1_0437ECED1_0439ECED1_3715
ECOL585057 ECIAI39_1394ECIAI39_1618ECIAI39_0261ECIAI39_0262ECIAI39_0260ECIAI39_3538
ECOL585056 ECUMN_1952ECUMN_1579ECUMN_0453ECUMN_0452ECUMN_0454ECUMN_3529
ECOL585055 EC55989_1830EC55989_1438EC55989_0425EC55989_0424EC55989_0426EC55989_3457
ECOL585035 ECS88_1711ECS88_1417ECS88_0410ECS88_0409ECS88_0411ECS88_3444
ECOL585034 ECIAI1_1714ECIAI1_1300ECIAI1_0415ECIAI1_0414ECIAI1_0416ECIAI1_3189
ECOL481805 ECOLC_1967ECOLC_2349ECOLC_3218ECOLC_3219ECOLC_3217ECOLC_0656
ECOL469008 ECBD_1981ECBD_2342ECBD_3246ECBD_3247ECBD_3245ECBD_0698
ECOL439855 ECSMS35_1535ECSMS35_1852ECSMS35_0451ECSMS35_0450ECSMS35_0452ECSMS35_3339
ECOL413997 ECB_01633ECB_01254ECB_00363ECB_00362ECB_00364ECB_02913
ECOL409438 ECSE_1786ECSE_1327ECSE_0437ECSE_0436ECSE_0438ECSE_3322
ECOL405955 APECO1_742APECO1_437APECO1_1595APECO1_1596APECO1_3366
ECOL364106 UTI89_C1853UTI89_C1548UTI89_C0437UTI89_C0436UTI89_C0439UTI89_C3483
ECOL362663 ECP_1609ECP_1330ECP_0474ECP_0473ECP_0475ECP_3136
ECOL331111 ECE24377A_1876ECE24377A_1479ECE24377A_0446ECE24377A_0445ECE24377A_0447ECE24377A_3506
ECOL316407 ECK1658:JW1654:B1662ECK1272:JW1269:B1277ECK0409:JW0405:B0415ECK0408:JW0404:B0414ECK0410:JW0406:B0416ECK3032:JW3009:B3041
ECOL199310 C2056C1746C0525C0524C0527C3795
ECAR218491 ECA1923ECA1943ECA1127ECA1126ECA1128ECA0899
DVUL882 DVU_1200DVU_1199DVU_1198DVU_1201DVU_1197DVU_1775
DSP255470 CBDBA1104CBDBA1103CBDBA1102CBDBA1105CBDBA1206CBDBA1103
DSP216389 DEHABAV1_1000DEHABAV1_0999DEHABAV1_0998DEHABAV1_1001DEHABAV1_1089DEHABAV1_0999
DRED349161 DRED_2092DRED_2091DRED_2090DRED_2093DRED_1069DRED_0778
DPSY177439 DP1099DP1100DP1101DP2785DP1102DP0701
DOLE96561 DOLE_2078DOLE_2077DOLE_2076DOLE_2079DOLE_2075DOLE_2077
DNOD246195 DNO_0473DNO_0471DNO_0474DNO_0470DNO_0472
DHAF138119 DSY1663DSY1664DSY1665DSY1662DSY2364DSY1664
DETH243164 DET_1189DET_1188DET_1187DET_1190DET_1278DET_1188
DDES207559 DDE_2435DDE_2436DDE_2437DDE_2434DDE_2438DDE_1050
DARO159087 DARO_4095DARO_3738DARO_0605DARO_3739DARO_3737
CVIO243365 CV_2387CV_2005CV_2390CV_1290CV_2391CV_4216
CVES412965 COSY_0462COSY_0464COSY_0726COSY_0465COSY_0463
CTET212717 CTC_00672CTC_00673CTC_00674CTC_00671CTC_01581CTC_00673
CTEP194439 CT_1591CT_2037CT_0747CT_1709CT_1591
CSAL290398 CSAL_2099CSAL_0115CSAL_2583CSAL_2585CSAL_2582CSAL_2584
CRUT413404 RMAG_0504RMAG_0506RMAG_0800RMAG_0507RMAG_0505
CPRO264201 PC0891PC0890PC0889PC1042PC0890
CPER289380 CPR_0531CPR_0532CPR_0533CPR_0530CPR_1792
CPER195103 CPF_0547CPF_0548CPF_0549CPF_0546CPF_2078
CPER195102 CPE0567CPE0568CPE0569CPE0566CPE1824
CNOV386415 NT01CX_0714NT01CX_0713NT01CX_0712NT01CX_0715NT01CX_1978NT01CX_0713
CMIC443906 CMM_0962CMM_0961CMM_0960CMM_0963CMM_1792
CKLU431943 CKL_2168CKL_2167CKL_2166CKL_2169CKL_1227
CJAP155077 CJA_2696CJA_2689CJA_2694CJA_2698CJA_2693CJA_2695
CHYD246194 CHY_1474CHY_1473CHY_1472CHY_1475CHY_1994CHY_1473
CDES477974 DAUD_0624DAUD_0625DAUD_0626DAUD_0623DAUD_1020DAUD_0625
CCHL340177 CAG_0625CAG_1788CAG_0132CAG_0623CAG_0417CAG_1788
CCAV227941 CCA_00213CCA_00895CCA_00894CCA_00896CCA_00895
CBUR434922 COXBU7E912_0657COXBU7E912_0658COXBU7E912_0659COXBU7E912_0655COXBU7E912_0579COXBU7E912_0658
CBUR360115 COXBURSA331_A0761COXBURSA331_A0762COXBURSA331_A0763COXBURSA331_A0758COXBURSA331_A1578COXBURSA331_A0762
CBUR227377 CBU_0646CBU_0647CBU_0648CBU_0643CBU_1417CBU_0647
CBOT536232 CLM_3261CLM_3260CLM_3259CLM_3262CLM_2103CLM_3260
CBOT515621 CLJ_B3119CLJ_B3118CLJ_B3117CLJ_B3120CLJ_B2073CLJ_B3118
CBOT508765 CLL_A1296CLL_A1297CLL_A1298CLL_A1295CLL_A2406
CBOT498213 CLD_1677CLD_1678CLD_1679CLD_1676CLD_2751CLD_3201
CBOT441772 CLI_2921CLI_2920CLI_2919CLI_2922CLI_1950CLI_2975
CBOT441771 CLC_2764CLC_2763CLC_2762CLC_2765CLC_1830CLC_2815
CBOT441770 CLB_2831CLB_2830CLB_2829CLB_2832CLB_1823CLB_2882
CBOT36826 CBO2865CBO2864CBO2863CBO2866CBO1886CBO2921
CBLO291272 BPEN_377BPEN_437BPEN_241BPEN_240BPEN_242BPEN_067
CBLO203907 BFL366BFL425BFL235BFL234BFL236BFL065
CBEI290402 CBEI_1225CBEI_1226CBEI_1227CBEI_1224CBEI_1701
CACE272562 CAC0591CAC0592CAC0593CAC0590CAC2084
BWEI315730 BCERKBAB4_3942BCERKBAB4_3943BCERKBAB4_3944BCERKBAB4_3941BCERKBAB4_4034BCERKBAB4_3943
BVIE269482 BCEP1808_4180BCEP1808_5269BCEP1808_0873BCEP1808_0877BCEP1808_0872BCEP1808_2793
BTHU412694 BALH_3726BALH_3727BALH_3728BALH_3725BALH_3790BALH_3727
BTHU281309 BT9727_3852BT9727_3853BT9727_3854BT9727_3851BT9727_3924BT9727_3853
BTHA271848 BTH_II1514BTH_I1530BTH_I1542BTH_I1529BTH_I0595
BSUB BSU23270BSU23260BSU23250BSU23280BSU24320
BSP36773 BCEP18194_B2300BCEP18194_B1027BCEP18194_A4057BCEP18194_A4064BCEP18194_A4056BCEP18194_A6016
BSP107806 BU112BU271BU459BU462BU463BU059
BPSE320373 BURPS668_A1292BURPS668_3017BURPS668_3012BURPS668_3018BURPS668_0715
BPSE320372 BURPS1710B_B2916BURPS1710B_A3360BURPS1710B_A3355BURPS1710B_A3361BURPS1710B_A0940
BPSE272560 BPSS0883BPSL2627BPSL2624BPSL2628BPSL0678
BPET94624 BPET0617BPET3957BPET0616BPET3956BPET3958
BPER257313 BP2874BP3485BP2948BP3486BP0471
BPAR257311 BPP0955BPP0858BPP3871BPP0859BPP4385
BMAL320389 BMA10247_A0959BMA10247_2017BMA10247_2013BMA10247_2018BMA10247_2442
BMAL320388 BMASAVP1_0332BMASAVP1_A0763BMASAVP1_A0767BMASAVP1_A0762BMASAVP1_A2716
BMAL243160 BMA_A1349BMA_2146BMA_2143BMA_2147BMA_0230
BLIC279010 BL01890BL01889BL01888BL01891BL01528
BHAL272558 BH1555BH1556BH1557BH1554BH2785
BCLA66692 ABC1811ABC1812ABC1813ABC3987ABC2466ABC1812
BCIC186490 BCI_0087BCI_0300BCI_0602BCI_0601BCI_0603BCI_0623
BCER572264 BCA_4223BCA_4224BCA_4225BCA_4222BCA_4291BCA_4224
BCER405917 BCE_4180BCE_4181BCE_4182BCE_4179BCE_4255BCE_4181
BCER315749 BCER98_2809BCER98_2810BCER98_2811BCER98_2808BCER98_2875BCER98_2810
BCER288681 BCE33L3866BCE33L3867BCE33L3868BCE33L3865BCE33L3935BCE33L3867
BCER226900 BC_4110BC_4111BC_4112BC_4109BC_4181BC_4111
BCEN331272 BCEN2424_3795BCEN2424_4731BCEN2424_0956BCEN2424_0960BCEN2424_0955BCEN2424_2688
BCEN331271 BCEN_4568BCEN_3636BCEN_0477BCEN_0481BCEN_0476BCEN_2077
BBRO257310 BB1167BB0952BB4344BB0953BB4971
BAPH198804 BUSG104BUSG261BUSG443BUSG446BUSG447BUSG056
BANT592021 BAA_4354BAA_4355BAA_4357BAA_4353BAA_4423BAA_4355
BANT568206 BAMEG_4372BAMEG_4373BAMEG_4375BAMEG_4371BAMEG_4441BAMEG_4373
BANT261594 GBAA4332GBAA4333GBAA4334GBAA4331GBAA4406GBAA4333
BANT260799 BAS4019BAS4020BAS4021BAS4018BAS4086BAS4020
BAMY326423 RBAM_021410RBAM_021400RBAM_021390RBAM_021420RBAM_022650
BAMB398577 BAMMC406_3686BAMMC406_4586BAMMC406_0826BAMMC406_0830BAMMC406_0825BAMMC406_2606
BAMB339670 BAMB_5522BAMB_4122BAMB_0817BAMB_0821BAMB_0816BAMB_2742
ASP76114 EBA3569EBA3120EBA3566EBA1045EBA3564EBA3567
ASP62977 ACIAD0249ACIAD3249ACIAD3571ACIAD0247ACIAD3572ACIAD2913
ASP62928 AZO0320AZO0318AZO2803AZO0317AZO0319
ASP232721 AJS_4077AJS_2767AJS_3190AJS_2768AJS_2766
ASAL382245 ASA_2183ASA_1766ASA_0982ASA_0979ASA_0983ASA_1293
APLE434271 APJL_0403APJL_0404APJL_0405APJL_0402APJL_0202
APLE416269 APL_0383APL_0384APL_0385APL_0382APL_0201
AHYD196024 AHA_2116AHA_1807AHA_3329AHA_3333AHA_3328AHA_1311
AFER243159 AFE_2730AFE_2728AFE_2731AFE_2727AFE_1098
AEHR187272 MLG_0376MLG_0378MLG_0375MLG_0379MLG_0377
ADEH290397 ADEH_2741ADEH_2740ADEH_2739ADEH_2742ADEH_2738ADEH_2740
ABOR393595 ABO_2173ABO_2171ABO_2174ABO_2170ABO_2172
ABAC204669 ACID345_2148ACID345_1214ACID345_3337ACID345_1215ACID345_3140
AAVE397945 AAVE_4731AAVE_2231AAVE_3555AAVE_2230AAVE_2232
AAEO224324 AQ_1707AQ_350AQ_132AQ_138AQ_350


Organism features enriched in list (features available for 260 out of the 276 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.000552965112
Disease:Bubonic_plague 0.007617466
Disease:Dysentery 0.007617466
Endospores:No 3.018e-1353211
Endospores:Yes 6.228e-84253
GC_Content_Range4:0-40 1.175e-863213
GC_Content_Range4:40-60 7.079e-9133224
GC_Content_Range7:30-40 8.053e-846166
GC_Content_Range7:50-60 9.534e-974107
Genome_Size_Range5:0-2 4.559e-1529155
Genome_Size_Range5:4-6 3.251e-14124184
Genome_Size_Range5:6-10 0.00277283047
Genome_Size_Range9:0-1 0.0027689527
Genome_Size_Range9:1-2 4.401e-1224128
Genome_Size_Range9:2-3 0.007826243120
Genome_Size_Range9:4-5 8.722e-66296
Genome_Size_Range9:5-6 7.388e-86288
Genome_Size_Range9:6-8 0.00349592538
Gram_Stain:Gram_Neg 9.354e-10184333
Gram_Stain:Gram_Pos 0.003674154150
Habitat:Host-associated 0.000166872206
Habitat:Multiple 0.001358795178
Habitat:Specialized 0.00986711653
Habitat:Terrestrial 0.00445422131
Motility:No 0.000161049151
Motility:Yes 0.0000223143267
Optimal_temp.:- 0.0003399134257
Optimal_temp.:35-37 0.00039421213
Pathogenic_in:Animal 0.00018994366
Pathogenic_in:No 0.000119280226
Shape:Coccus 5.934e-81582
Shape:Irregular_coccus 0.0034868217
Shape:Rod 4.692e-15200347
Shape:Sphere 0.0012963219
Shape:Spiral 3.546e-6334
Temp._range:Hyperthermophilic 0.0001647223
Temp._range:Mesophilic 0.0017183224473
Temp._range:Psychrophilic 0.007446289



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 136
Effective number of orgs (counting one per cluster within 468 clusters): 114

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS11
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB40
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TLET416591 ncbi Thermotoga lettingae TMO1
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17281
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE292459 ncbi Symbiobacterium thermophilum IAM 148631
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSOL273057 ncbi Sulfolobus solfataricus P20
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SMUT210007 ncbi Streptococcus mutans UA1591
SMAR399550 ncbi Staphylothermus marinus F10
SGOR29390 Streptococcus gordonii Challis1
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RPAL316058 ncbi Rhodopseudomonas palustris HaA21
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 80
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97901
PMOB403833 ncbi Petrotoga mobilis SJ951
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53341
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LMON265669 ncbi Listeria monocytogenes 4b F23651
LMON169963 ncbi Listeria monocytogenes EGD-e1
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LINN272626 ncbi Listeria innocua Clip112621
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LACI272621 ncbi Lactobacillus acidophilus NCFM0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
GBET391165 ncbi Granulibacter bethesdensis CGDNIH11
FMAG334413 ncbi Finegoldia magna ATCC 293280
EFAE226185 ncbi Enterococcus faecalis V5831
ECAN269484 ncbi Ehrlichia canis Jake1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CSP78 Caulobacter sp.1
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
BTUR314724 ncbi Borrelia turicatae 91E1351
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH1
BHEN283166 ncbi Bartonella henselae Houston-11
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B311
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
AORE350688 ncbi Alkaliphilus oremlandii OhILAs1
AMAR234826 ncbi Anaplasma marginale St. Maries1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
ACAU438753 ncbi Azorhizobium caulinodans ORS 5711


Names of the homologs of the genes in the group in each of these orgs
  EG11406   EG11331   EG11322   EG11321   EG10666   EG10465   
WPIP955 WD_0710
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116 TVN0575
TTEN273068
TPEN368408
TPAL243276 TP_1015
TLET416591 TLET_1512
TDEN243275 TDE_1657
TACI273075 TA1014
STOK273063
STHE322159
STHE299768
STHE292459 STH1849
STHE264199
SSUI391296 SSU98_1824
SSUI391295
SSOL273057
SPYO370554 MGAS10750_SPY1604
SPYO370553 MGAS2096_SPY1570
SPYO370552 MGAS10270_SPY1612
SPYO370551 MGAS9429_SPY1549
SPYO319701 M28_SPY1532
SPYO293653 M5005_SPY1545
SPYO286636 M6_SPY1534
SPYO198466 SPYM3_1572
SPYO193567
SPYO186103 SPYM18_1884
SPYO160490 SPY1818
SMUT210007 SMU_1845
SMAR399550
SGOR29390 SGO_1861
SACI330779
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RPAL316058 RPB_2636
RMAS416276
RFEL315456
RCON272944
RCAS383372 RCAS_3255
RCAN293613
RBEL391896
RBEL336407
RALB246199
RAKA293614
PTOR263820 PTO0570
PMOB403833 PMOB_1002
PISL384616
PHOR70601
PAST100379
PARS340102
PAER178306
PABY272844
OTSU357244
NPHA348780 NP1356A
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBAR269797
MART243272
MAEO419665
MACE188937
LWEL386043 LWE1374
LSAK314315 LSA0675
LMON265669 LMOF2365_1376
LMON169963 LMO1359
LJOH257314 LJ_1551
LINN272626 LIN1396
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967 LSEI_1640
LACI272621
IHOS453591
HWAL362976 HQ1396A
HSP64091
HSAL478009
HMUK485914
HMAR272569 RRNAC2367
HBUT415426
GBET391165 GBCGDNIH1_1006
FMAG334413
EFAE226185 EF_0977
ECAN269484 ECAJ_0112
CSUL444179
CSP78 CAUL_3044
CPHY357809
CPEL335992
CMET456442
CMAQ397948
CKOR374847
BTUR314724 BT0107
BLON206672
BHER314723 BH0107
BHEN283166 BH07590
BGAR290434
BBUR224326 BB_0107
BAPH372461 BCC_285
BAFZ390236
AYEL322098
AURANTIMONAS
APHA212042 APH_0037
APER272557
AORE350688 CLOS_1613
AMAR234826 AM015
AFUL224325 AF_0484
ACAU438753 AZC_1263


Organism features enriched in list (features available for 128 out of the 136 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00660762992
Arrangment:Pairs 0.004642315112
Disease:Wide_range_of_infections 4.039e-81111
Endospores:No 1.648e-1179211
Endospores:Yes 0.0001326253
GC_Content_Range4:0-40 4.569e-1382213
GC_Content_Range4:40-60 0.000561034224
GC_Content_Range4:60-100 6.019e-712145
GC_Content_Range7:0-30 7.162e-72547
GC_Content_Range7:30-40 4.698e-657166
GC_Content_Range7:50-60 0.000118410107
GC_Content_Range7:60-70 6.279e-612134
Genome_Size_Range5:0-2 5.338e-2784155
Genome_Size_Range5:4-6 1.514e-148184
Genome_Size_Range9:0-1 4.006e-81927
Genome_Size_Range9:1-2 5.089e-1765128
Genome_Size_Range9:3-4 0.0028251877
Genome_Size_Range9:4-5 1.853e-7496
Genome_Size_Range9:5-6 1.331e-6488
Gram_Stain:Gram_Neg 4.017e-1239333
Habitat:Host-associated 0.002492458206
Habitat:Multiple 0.000023021178
Habitat:Specialized 0.00041172253
Motility:No 0.007628943151
Motility:Yes 0.001863645267
Optimal_temp.:- 0.008828346257
Oxygen_Req:Aerobic 0.000509426185
Oxygen_Req:Anaerobic 0.000044738102
Pathogenic_in:Animal 0.0001985466
Pathogenic_in:Swine 0.000479655
Salinity:Extreme_halophilic 0.006237757
Salinity:Non-halophilic 0.004830033106
Shape:Coccus 0.00108262982
Shape:Irregular_coccus 1.176e-71417
Shape:Rod 5.092e-1144347
Shape:Sphere 6.749e-91619
Temp._range:Hyperthermophilic 7.216e-81723
Temp._range:Mesophilic 0.000019987473
Temp._range:Thermophilic 0.00652771435



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 10
Effective number of orgs (counting one per cluster within 468 clusters): 8

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
DETH243164 ncbi Dehalococcoides ethenogenes 195 0.00133085746
CCAV227941 ncbi Chlamydophila caviae GPIC 0.00146862745
DSP216389 ncbi Dehalococcoides sp. BAV1 0.00149205856
DSP255470 ncbi Dehalococcoides sp. CBDB1 0.00158665916
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum) 0.00213826216
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum) 0.00253986396
CBLO203907 ncbi Candidatus Blochmannia floridanus 0.00297496566
BCIC186490 Candidatus Baumannia cicadellinicola 0.00353316756
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN 0.00410406926
CCHL340177 ncbi Chlorobium chlorochromatii CaD3 0.00946247956


Names of the homologs of the genes in the group in each of these orgs
  EG11406   EG11331   EG11322   EG11321   EG10666   EG10465   
DETH243164 DET_1189DET_1188DET_1187DET_1190DET_1278DET_1188
CCAV227941 CCA_00213CCA_00895CCA_00894CCA_00896CCA_00895
DSP216389 DEHABAV1_1000DEHABAV1_0999DEHABAV1_0998DEHABAV1_1001DEHABAV1_1089DEHABAV1_0999
DSP255470 CBDBA1104CBDBA1103CBDBA1102CBDBA1105CBDBA1206CBDBA1103
BAPH198804 BUSG104BUSG261BUSG443BUSG446BUSG447BUSG056
BSP107806 BU112BU271BU459BU462BU463BU059
CBLO203907 BFL366BFL425BFL235BFL234BFL236BFL065
BCIC186490 BCI_0087BCI_0300BCI_0602BCI_0601BCI_0603BCI_0623
CBLO291272 BPEN_377BPEN_437BPEN_241BPEN_240BPEN_242BPEN_067
CCHL340177 CAG_0625CAG_1788CAG_0132CAG_0623CAG_0417CAG_1788


Organism features enriched in list (features available for 9 out of the 10 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
GC_Content_Range7:0-30 0.0032027447
Genome_Size_Range5:0-2 0.00014618155
Genome_Size_Range9:0-1 0.0003787427



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181650.4636
PWY-5386 (methylglyoxal degradation I)3052020.4323
GLYCOCAT-PWY (glycogen degradation I)2461730.4232
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162440.4096
AST-PWY (arginine degradation II (AST pathway))1201030.4084
PWY-5194 (siroheme biosynthesis)3122010.4057



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11331   EG11322   EG11321   EG10666   EG10465   
EG114060.9998320.9998180.9998760.9994780.999739
EG113310.9997940.9996310.998640.999722
EG113220.9998740.9999210.999746
EG113210.9997360.9996
EG106660.999422
EG10465



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PAIRWISE BLAST SCORES:

  EG11406   EG11331   EG11322   EG11321   EG10666   EG10465   
EG114060.0f0-----
EG11331-0.0f0----
EG11322--0.0f0---
EG11321---0.0f0--
EG10666----0.0f0-
EG10465-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants)) (degree of match pw to cand: 0.833, degree of match cand to pw: 0.833, average score: 0.959)
  Genes in pathway or complex:
             0.8919 0.7380 EG11079 (ribF) RIBF-MONOMER (bifunctional riboflavin kinase / FMN adenylyltransferase)
   *in cand* 0.9998 0.9995 EG11406 (ribC) RIBOFLAVIN-SYN-MONOMER (RibC)
   *in cand* 0.9999 0.9997 EG11322 (ribE) LUMAZINESYN-MONOMER (RibE)
   *in cand* 0.9997 0.9994 EG10465 (ribB) DIOHBUTANONEPSYN-MONOMER (3,4-dihydroxy-2-butanone 4-phosphate synthase)
   *in cand* 0.9998 0.9996 EG11321 (ribD) RIBOFLAVINSYNDEAM-MONOMER (fused diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase)
   *in cand* 0.9996 0.9986 EG11331 (ribA) GTP-CYCLOHYDRO-II-MONOMER (GTP cyclohydrolase II)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9995 0.9986 EG10666 (nusB) EG10666-MONOMER (transcription antitermination protein NusB)
   This pathway has holes



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10666 EG11321 EG11322 (centered at EG11322)
EG11406 (centered at EG11406)
EG11331 (centered at EG11331)
EG10465 (centered at EG10465)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11406   EG11331   EG11322   EG11321   EG10666   EG10465   
392/623391/623402/623399/623415/623333/623
AAEO224324:0:Tyes111215405-154
AAUR290340:2:Tyes1-20--
AAVE397945:0:Tyes2455-1129802
ABAC204669:0:Tyes-9420213811939
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