CANDIDATE ID: 436

CANDIDATE ID: 436

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9927407e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG11440 (def) (b3287)
   Products of gene:
     - EG11440-MONOMER (peptide deformylase)
       Reactions:
        formyl-L-methionyl peptide + H2O  ->  methionyl peptide + formate + H+

- EG11268 (fmt) (b3288)
   Products of gene:
     - EG11268-MONOMER (10-formyltetrahydrofolate:L-methionyl-tRNAfMet N-formyltransferase)
       Reactions:
        L-methionyl-tRNAfmet + 10-formyl-tetrahydrofolate + H2O  ->  N-formyl-L-methionyl-tRNAfmet + tetrahydrofolate

- EG11197 (yidC) (b3705)
   Products of gene:
     - YIDC (inner-membrane protein insertion factor)
     - SECD-SECF-YAJC-YIDC-CPLX (SecD-SecF-YajC-YidC Secretion Complex)
     - SEC-SECRETION-CPLX (Sec Protein Secretion Complex)

- EG10892 (rpmH) (b3703)
   Products of gene:
     - EG10892-MONOMER (50S ribosomal subunit protein L34)
     - CPLX0-3962 (50S ribosomal subunit)
     - CPLX0-3964 (ribosome)

- EG10862 (rnpA) (b3704)
   Products of gene:
     - EG10862-MONOMER (RNase P protein component; processes tRNA, 4.5S RNA)
     - CPLX0-1382 (RNase P)
       Reactions:
        a tRNA precursor with a 5' extension  ->  an uncharged tRNA + a single-stranded RNA
         In pathways
         PWY0-1479 (tRNA processing pathway)
        a tRNA precursor with a 5' extension and a short 3' extension  ->  a single-stranded RNA + a tRNA precursor with a short 3' extension
         In pathways
         PWY0-1479 (tRNA processing pathway)

- EG10424 (gyrB) (b3699)
   Products of gene:
     - EG10424-MONOMER (DNA gyrase, subunit B)
     - CPLX0-2425 (DNA gyrase)
       Reactions:
        EC# 5.99.1.3



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 284
Effective number of orgs (counting one per cluster within 468 clusters): 197

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola6
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A6
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110186
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XFAS405440 ncbi Xylella fastidiosa M126
XFAS183190 ncbi Xylella fastidiosa Temecula16
XFAS160492 ncbi Xylella fastidiosa 9a5c6
XCAM487884 Xanthomonas campestris pv. paulliniae6
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-106
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80046
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339136
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3066
XAUT78245 ncbi Xanthobacter autotrophicus Py25
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1146
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TTUR377629 ncbi Teredinibacter turnerae T79015
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB45
TSP1755 Thermoanaerobacter sp.5
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332235
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252596
TCRU317025 ncbi Thiomicrospira crunogena XCL-26
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
SSP94122 ncbi Shewanella sp. ANA-35
SSP644076 Silicibacter sp. TrichCH4B5
SSP292414 ncbi Ruegeria sp. TM10405
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB36
SPRO399741 ncbi Serratia proteamaculans 5686
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SONE211586 ncbi Shewanella oneidensis MR-16
SMEL266834 ncbi Sinorhizobium meliloti 10216
SMED366394 ncbi Sinorhizobium medicae WSM4196
SLOI323850 ncbi Shewanella loihica PV-46
SLAC55218 Ruegeria lacuscaerulensis5
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB5
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-406
SBOY300268 ncbi Shigella boydii Sb2276
SBAL402882 ncbi Shewanella baltica OS1856
SBAL399599 ncbi Shewanella baltica OS1956
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170295
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.15
RSOL267608 ncbi Ralstonia solanacearum GMI10006
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RRIC452659 ncbi Rickettsia rickettsii Iowa5
RPRO272947 ncbi Rickettsia prowazekii Madrid E5
RPOM246200 ncbi Ruegeria pomeroyi DSS-35
RPAL316058 ncbi Rhodopseudomonas palustris HaA25
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL316055 ncbi Rhodopseudomonas palustris BisA535
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38415
RFEL315456 ncbi Rickettsia felis URRWXCal25
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1346
RETL347834 ncbi Rhizobium etli CFN 426
RDEN375451 ncbi Roseobacter denitrificans OCh 1145
RCON272944 ncbi Rickettsia conorii Malish 75
RCAN293613 ncbi Rickettsia canadensis McKiel5
RBEL336407 ncbi Rickettsia bellii RML369-C5
PTHE370438 ncbi Pelotomaculum thermopropionicum SI5
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP56811 Psychrobacter sp.6
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24406
PPRO298386 ncbi Photobacterium profundum SS95
PMUL272843 ncbi Pasteurella multocida multocida Pm706
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PING357804 ncbi Psychromonas ingrahamii 376
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L486
PCRY335284 ncbi Psychrobacter cryohalolentis K56
PCAR338963 ncbi Pelobacter carbinolicus DSM 23806
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PARC259536 ncbi Psychrobacter arcticus 273-46
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OIHE221109 ncbi Oceanobacillus iheyensis HTE8315
OCAR504832 ncbi Oligotropha carboxidovorans OM55
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2556
NOCE323261 ncbi Nitrosococcus oceani ATCC 197076
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534426
NMEN272831 ncbi Neisseria meningitidis FAM186
NMEN122587 ncbi Neisseria meningitidis Z24916
NMEN122586 ncbi Neisseria meningitidis MC586
NHAM323097 ncbi Nitrobacter hamburgensis X145
NGON242231 ncbi Neisseria gonorrhoeae FA 10906
NEUT335283 ncbi Nitrosomonas eutropha C916
NEUR228410 ncbi Nitrosomonas europaea ATCC 197186
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124445
MXAN246197 ncbi Myxococcus xanthus DK 16226
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E6
MSP409 Methylobacterium sp.5
MSP400668 ncbi Marinomonas sp. MWYL16
MSP266779 ncbi Chelativorans sp. BNC16
MMAG342108 ncbi Magnetospirillum magneticum AMB-15
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA15
MCAP243233 ncbi Methylococcus capsulatus Bath6
MAQU351348 ncbi Marinobacter aquaeolei VT86
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53345
LPNE400673 ncbi Legionella pneumophila Corby6
LPNE297246 ncbi Legionella pneumophila Paris6
LPNE297245 ncbi Legionella pneumophila Lens6
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 16
LMON265669 ncbi Listeria monocytogenes 4b F23655
LMON169963 ncbi Listeria monocytogenes EGD-e5
LINN272626 ncbi Listeria innocua Clip112625
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille6
JSP290400 ncbi Jannaschia sp. CCS15
ILOI283942 ncbi Idiomarina loihiensis L2TR6
HSOM228400 ncbi Haemophilus somnus 23366
HSOM205914 ncbi Haemophilus somnus 129PT6
HNEP81032 Hyphomonas neptunium5
HINF71421 ncbi Haemophilus influenzae Rd KW206
HINF374930 ncbi Haemophilus influenzae PittEE6
HINF281310 ncbi Haemophilus influenzae 86-028NP6
HHAL349124 ncbi Halorhodospira halophila SL16
HDUC233412 ncbi Haemophilus ducreyi 35000HP6
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HARS204773 ncbi Herminiimonas arsenicoxydans6
GURA351605 ncbi Geobacter uraniireducens Rf46
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-26
GSUL243231 ncbi Geobacter sulfurreducens PCA5
GMET269799 ncbi Geobacter metallireducens GS-155
GKAU235909 ncbi Geobacillus kaustophilus HTA4266
GBET391165 ncbi Granulibacter bethesdensis CGDNIH15
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-005
FTUL418136 ncbi Francisella tularensis tularensis WY96-34185
FTUL401614 ncbi Francisella novicida U1125
FTUL393115 ncbi Francisella tularensis tularensis FSC1985
FTUL393011 ncbi Francisella tularensis holarctica OSU185
FTUL351581 Francisella tularensis holarctica FSC2005
FRANT ncbi Francisella tularensis tularensis SCHU S45
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250175
ESP42895 Enterobacter sp.6
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough5
DSHI398580 ncbi Dinoroseobacter shibae DFL 125
DPSY177439 ncbi Desulfotalea psychrophila LSv545
DOLE96561 ncbi Desulfococcus oleovorans Hxd36
DNOD246195 ncbi Dichelobacter nodosus VCS1703A6
DARO159087 ncbi Dechloromonas aromatica RCB6
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA6
CSP78 Caulobacter sp.5
CSP501479 Citreicella sp. SE455
CSAL290398 ncbi Chromohalobacter salexigens DSM 30436
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)6
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CJAP155077 Cellvibrio japonicus6
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334066
CDIF272563 ncbi Clostridium difficile 6305
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1116
CBUR360115 ncbi Coxiella burnetii RSA 3316
CBUR227377 ncbi Coxiella burnetii RSA 4936
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN6
CBLO203907 ncbi Candidatus Blochmannia floridanus6
CAULO ncbi Caulobacter crescentus CB155
BWEI315730 ncbi Bacillus weihenstephanensis KBAB46
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTRI382640 ncbi Bartonella tribocorum CIP 1054765
BTHU412694 ncbi Bacillus thuringiensis Al Hakam5
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-275
BTHA271848 ncbi Burkholderia thailandensis E2646
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13305
BSUB ncbi Bacillus subtilis subtilis 1686
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.6
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)6
BQUI283165 ncbi Bartonella quintana Toulouse5
BPUM315750 ncbi Bacillus pumilus SAFR-0326
BPSE320373 ncbi Burkholderia pseudomallei 6686
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii6
BPER257313 ncbi Bordetella pertussis Tohama I6
BPAR257311 ncbi Bordetella parapertussis 128226
BOVI236 Brucella ovis5
BMEL359391 ncbi Brucella melitensis biovar Abortus 23085
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M5
BMAL320389 ncbi Burkholderia mallei NCTC 102476
BMAL320388 ncbi Burkholderia mallei SAVP16
BMAL243160 ncbi Burkholderia mallei ATCC 233446
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BHEN283166 ncbi Bartonella henselae Houston-15
BHAL272558 ncbi Bacillus halodurans C-1255
BCLA66692 ncbi Bacillus clausii KSM-K165
BCIC186490 Candidatus Baumannia cicadellinicola6
BCER572264 ncbi Bacillus cereus 03BB1026
BCER405917 Bacillus cereus W6
BCER315749 ncbi Bacillus cytotoxicus NVH 391-986
BCER288681 ncbi Bacillus cereus E33L6
BCER226900 ncbi Bacillus cereus ATCC 145796
BCEN331272 ncbi Burkholderia cenocepacia HI24246
BCEN331271 ncbi Burkholderia cenocepacia AU 10546
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB506
BBAC360095 ncbi Bartonella bacilliformis KC5835
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)5
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)6
BANT592021 ncbi Bacillus anthracis A02486
BANT568206 ncbi Bacillus anthracis CDC 6846
BANT261594 ncbi Bacillus anthracis Ames Ancestor6
BANT260799 ncbi Bacillus anthracis Sterne6
BAMY326423 ncbi Bacillus amyloliquefaciens FZB426
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD6
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
ASP76114 ncbi Aromatoleum aromaticum EbN16
ASP62977 ncbi Acinetobacter sp. ADP16
ASP62928 ncbi Azoarcus sp. BH726
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL036
APLE416269 ncbi Actinobacillus pleuropneumoniae L206
AMET293826 ncbi Alkaliphilus metalliredigens QYMF5
AHYD196024 Aeromonas hydrophila dhakensis6
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232706
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-16
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ACRY349163 ncbi Acidiphilium cryptum JF-55
ACAU438753 ncbi Azorhizobium caulinodans ORS 5716
ABOR393595 ncbi Alcanivorax borkumensis SK26
ABAU360910 ncbi Bordetella avium 197N6
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455


Names of the homologs of the genes in the group in each of these orgs
  EG11440   EG11268   EG11197   EG10892   EG10862   EG10424   
YPSE349747 YPSIP31758_3882YPSIP31758_3883YPSIP31758_4157YPSIP31758_4154YPSIP31758_4155YPSIP31758_4150
YPSE273123 YPTB3665YPTB3666YPTB3948YPTB3945YPTB3946YPTB3940
YPES386656 YPDSF_0164YPDSF_0163YPDSF_3932YPDSF_3935YPDSF_3934YPDSF_0004
YPES377628 YPN_3827YPN_3828YPN_3959YPN_3956YPN_3957YPN_3952
YPES360102 YPA_3231YPA_3232YPA_4147YPA_4144YPA_4145YPA_4140
YPES349746 YPANGOLA_A0615YPANGOLA_A0614YPANGOLA_A4182YPANGOLA_A4178YPANGOLA_A4180YPANGOLA_A4174
YPES214092 YPO0242YPO0241YPO4102YPO4100YPO4101YPO4094
YPES187410 Y4023Y4022Y4117Y4114Y4115Y4110
YENT393305 YE3889YE3890YE4177YE4175YE4176YE4170
XORY360094 XOOORF_0696XOOORF_0697XOOORF_5264XOOORF_5266XOOORF_5265XOOORF_0004
XORY342109 XOO0546XOO0547XOO4370XOO4372XOO4371XOO0004
XORY291331 XOO0585XOO0586XOO4636XOO4637XOO0004
XFAS405440 XFASM12_1929XFASM12_1928XFASM12_2314XFASM12_2316XFASM12_2315XFASM12_0005
XFAS183190 PD_1763PD_1762PD_2121PD_2123PD_2122PD_0005
XFAS160492 XF0926XF0927XF2780XF2782XF2781XF0005
XCAM487884 XCC-B100_3930XCC-B100_3929XCC-B100_4466XCC-B100_4468XCC-B100_4467XCC-B100_0004
XCAM316273 XCAORF_0556XCAORF_0558XCAORF_4596XCAORF_4599XCAORF_4597XCAORF_0004
XCAM314565 XC_3819XC_3818XC_4330XC_4332XC_4331XC_0004
XCAM190485 XCC3749XCC3748XCC4240XCC4242XCC4241XCC0004
XAXO190486 XAC3801XAC3800XAC4372XAC4374XAC4373XAC0004
XAUT78245 XAUT_3305XAUT_3304XAUT_1921XAUT_1923XAUT_1873
VVUL216895 VV1_1048VV1_1047VV1_1007VV1_1004VV1_1005VV1_0996
VVUL196600 VV3225VV3226VV0003VV0005VV0004VV0014
VPAR223926 VP3042VP3043VP0003VP0005VP0004VP0014
VFIS312309 VF2543VF2544VF0003VF0005VF0004VF0012
VCHO345073 VC0395_A2473VC0395_A2474VC0395_A2514VC0395_A2512VC0395_A2513VC0395_A2504
VCHO VC0046VC0045VC0004VC0007VC0006VC0015
TTUR377629 TERTU_0037TERTU_0036TERTU_4739TERTU_4740TERTU_0005
TTEN273068 TTE1507TTE1506TTE2799TTE2801TTE0010
TSP1755 TETH514_1757TETH514_1755TETH514_2411TETH514_2413TETH514_0009
TPSE340099 TETH39_1320TETH39_1319TETH39_2292TETH39_2294TETH39_0010
TDEN292415 TBD_0014TBD_0015TBD_2825TBD_2827TBD_2826TBD_0003
TCRU317025 TCR_0193TCR_0192TCR_2197TCR_2199TCR_2198TCR_0012
STYP99287 STM3406STM3407STM3842STM3839STM3840STM3835
SSP94122 SHEWANA3_0035SHEWANA3_0034SHEWANA3_0006SHEWANA3_0008SHEWANA3_0012
SSP644076 SCH4B_2759SCH4B_2756SCH4B_1093SCH4B_1099SCH4B_3370
SSP292414 TM1040_2580TM1040_2577TM1040_0307TM1040_0313TM1040_0007
SSON300269 SSO_3427SSO_3428SSO_3656SSO_3653SSO_3654SSO_3649
SSED425104 SSED_0035SSED_0034SSED_0002SSED_0005SSED_0004SSED_0009
SPRO399741 SPRO_4511SPRO_4512SPRO_0028SPRO_0031SPRO_0030SPRO_0035
SPEA398579 SPEA_0031SPEA_0030SPEA_4257SPEA_4260SPEA_4259SPEA_0004
SONE211586 SO_0032SO_0031SO_0004SO_0007SO_0006SO_0011
SMEL266834 SMC01101SMC01100SMC01721SMC04434SMC01720SMC02782
SMED366394 SMED_0054SMED_0055SMED_0079SMED_0081SMED_0080SMED_3220
SLOI323850 SHEW_3736SHEW_3737SHEW_3866SHEW_3869SHEW_3868SHEW_0004
SLAC55218 SL1157_1868SL1157_1870SL1157_1620SL1157_1626SL1157_0799
SHIGELLA DEFFMTYIDCRPMHRNPAGYRB
SHAL458817 SHAL_0027SHAL_0026SHAL_4311SHAL_4314SHAL_4313SHAL_0004
SGLO343509 SG2246SG2247SG2429SG2432SG2431SG0004
SFUM335543 SFUM_0147SFUM_0148SFUM_2597SFUM_2595SFUM_2689
SFLE373384 SFV_3306SFV_3307SFV_3807SFV_3809SFV_3808SFV_3813
SFLE198214 AAN44781.1AAN44782.1AAN45202.1AAN45204.1AAN45203.1AAN45208.1
SENT454169 SEHA_C3710SEHA_C3711SEHA_C4176SEHA_C4174SEHA_C4175SEHA_C4169
SENT321314 SCH_3342SCH_3343SCH_3759SCH_3757SCH_3758SCH_3753
SENT295319 SPA3273SPA3274SPA3686SPA3683SPA3684SPA3679
SENT220341 STY4391STY4390STY3938STY3939ASTY3939STY3943
SENT209261 T4098T4097T3678T3680T3679T3684
SDYS300267 SDY_3463SDY_3464SDY_4188SDY_4185SDY_4186SDY_4181
SDEN318161 SDEN_0024SDEN_0023SDEN_3775SDEN_3778SDEN_3777SDEN_0004
SDEG203122 SDE_0021SDE_0020SDE_4014SDE_4017SDE_4016SDE_0004
SBOY300268 SBO_3280SBO_3281SBO_3671SBO_3674SBO_3673SBO_3678
SBAL402882 SHEW185_0027SHEW185_0026SHEW185_4379SHEW185_4382SHEW185_4381SHEW185_0004
SBAL399599 SBAL195_0031SBAL195_0030SBAL195_4521SBAL195_4524SBAL195_4523SBAL195_0004
RSPH349102 RSPH17025_0148RSPH17025_0151RSPH17025_2869RSPH17025_0070RSPH17025_0006
RSPH349101 RSPH17029_2532RSPH17029_2535RSPH17029_2725RSPH17029_2720RSPH17029_0015
RSPH272943 RSP_0872RSP_0875RSP_1064RSP_1059RSP_1346
RSOL267608 RSC0070RSC0072RSC0004RSC0001RSC0002RSC3440
RRUB269796 RRU_A3350RRU_A3351RRU_A3339RRU_A3336RRU_A0004
RRIC452659 RRIOWA_0336RRIOWA_0337RRIOWA_0098RRIOWA_1111RRIOWA_1051
RPRO272947 RP208RP209RP048RP610RP580
RPOM246200 SPO_3219SPO_3216SPO_0532SPO_0538SPO_0155
RPAL316058 RPB_0673RPB_0674RPB_0683RPB_0685RPB_0005
RPAL316056 RPC_0803RPC_0806RPC_0817RPC_0819RPC_0005
RPAL316055 RPE_0656RPE_0655RPE_0644RPE_0642RPE_0005
RPAL258594 RPA0621RPA0622RPA0632RPA0634RPA0004
RMET266264 RMET_3565RMET_3564RMET_3613RMET_3615RMET_0003
RLEG216596 RL0430RL0433RL0453RL0454RL0012
RFEL315456 RF_0324RF_0325RF_0131RF_0348RF_0947
REUT381666 H16_A3700H16_A3699H16_A3744H16_A3747H16_A3746H16_A0003
REUT264198 REUT_A3408REUT_A3407REUT_A3460REUT_A3463REUT_A3462REUT_A0003
RETL347834 RHE_CH00412RHE_CH00414RHE_CH00437RHE_CH00439RHE_CH00438RHE_CH00012
RDEN375451 RD1_1337RD1_1339RD1_1455RD1_1462RD1_0212
RCON272944 RC0278RC0279RC0074RC0936RC0884
RCAN293613 A1E_01200A1E_01205A1E_00230A1E_01740A1E_01965
RBEL336407 RBE_0560RBE_0561RBE_0011RBE_0866RBE_0995
PTHE370438 PTH_1791PTH_1790PTH_2919PTH_2920PTH_0005
PSYR223283 PSPTO_0177PSPTO_0178PSPTO_5612PSPTO_5615PSPTO_5614PSPTO_0004
PSYR205918 PSYR_0019PSYR_0018PSYR_5134PSYR_5137PSYR_5136PSYR_0004
PSTU379731 PST_0021PST_0020PST_4211PST_4214PST_4213PST_0004
PSP56811 PSYCPRWF_0042PSYCPRWF_2383PSYCPRWF_2388PSYCPRWF_0001PSYCPRWF_2390PSYCPRWF_0005
PSP312153 PNUC_2079PNUC_2078PNUC_2085PNUC_2088PNUC_0003
PPUT76869 PPUTGB1_0084PPUTGB1_0083PPUTGB1_5444PPUTGB1_0002PPUTGB1_0001PPUTGB1_0006
PPUT351746 PPUT_0084PPUT_0083PPUT_5309PPUT_5311PPUT_0004
PPUT160488 PP_0068PP_0067PP_0006PP_0009PP_0008PP_0013
PPRO298386 PBPRA3579PBPRA3580PBPRA0003PBPRA0004PBPRA0011
PMUL272843 PM1559PM1560PM1165PM1162PM1163PM1476
PMEN399739 PMEN_0055PMEN_0054PMEN_4620PMEN_4623PMEN_4622PMEN_0004
PLUM243265 PLU4695PLU4696PLU4906PLU4909PLU4908PLU0004
PING357804 PING_0078PING_0079PING_3611PING_3608PING_3609PING_3717
PHAL326442 PSHAA0023PSHAA0022PSHAA3022PSHAA3026PSHAA3025PSHAA0004
PFLU220664 PFL_0022PFL_0021PFL_6230PFL_6231PFL_0004
PFLU216595 PFLU0018PFLU0017PFLU6134PFLU6136PFLU6135PFLU0004
PFLU205922 PFL_0017PFL_0016PFL_5743PFL_5745PFL_0004
PENT384676 PSEEN0025PSEEN0024PSEEN5556PSEEN5559PSEEN5558PSEEN0004
PCRY335284 PCRYO_0038PCRYO_2467PCRYO_2473PCRYO_0002PCRYO_0001PCRYO_0006
PCAR338963 PCAR_0245PCAR_0244PCAR_3143PCAR_3146PCAR_3145PCAR_0004
PATL342610 PATL_0023PATL_0022PATL_4312PATL_4315PATL_4314PATL_0004
PARC259536 PSYC_0030PSYC_2139PSYC_2144PSYC_2147PSYC_2146PSYC_0004
PAER208964 PA0019PA0018PA5568PA5570PA5569PA0004
PAER208963 PA14_00200PA14_00190PA14_73410PA14_73420PA14_00050
OIHE221109 OB1506OB3494OB3496OB3495OB0006
OCAR504832 OCAR_7540OCAR_7539OCAR_7530OCAR_7528OCAR_4532
OANT439375 OANT_1344OANT_1345OANT_1361OANT_1363OANT_0139
NWIN323098 NWI_3064NWI_3065NWI_3074NWI_3076NWI_3075NWI_0004
NOCE323261 NOC_3014NOC_3015NOC_3087NOC_3089NOC_3088NOC_0019
NMUL323848 NMUL_A0394NMUL_A0393NMUL_A2776NMUL_A2778NMUL_A0003
NMEN374833 NMCC_2039NMCC_2038NMCC_0313NMCC_0316NMCC_0315NMCC_1933
NMEN272831 NMC0102NMC0103NMC0316NMC0319NMC0318NMC0204
NMEN122587 NMA0164NMA0163NMA0548NMA0551NMA0550NMA0056
NMEN122586 NMB_0110NMB_0111NMB_1907NMB_1904NMB_1905NMB_0212
NHAM323097 NHAM_3693NHAM_3694NHAM_3703NHAM_3705NHAM_0004
NGON242231 NGO1871NGO1870NGO2178NGO2182NGO2181NGO1772
NEUT335283 NEUT_0392NEUT_0391NEUT_2154NEUT_2151NEUT_2152NEUT_0003
NEUR228410 NE1970NE1971NE0387NE0390NE0389NE0003
NARO279238 SARO_2896SARO_2894SARO_0578SARO_0575SARO_3310
MXAN246197 MXAN_1430MXAN_1399MXAN_7509MXAN_7512MXAN_7511MXAN_0264
MSUC221988 MS2201MS2202MS0481MS0484MS0483MS2249
MSP409 M446_4240M446_4239M446_5081M446_5079M446_5333
MSP400668 MMWYL1_0017MMWYL1_0016MMWYL1_4485MMWYL1_4487MMWYL1_4486MMWYL1_0004
MSP266779 MESO_0394MESO_0393MESO_0376MESO_0374MESO_0375MESO_3603
MMAG342108 AMB0243AMB0242AMB4356AMB4353AMB0639
MLOT266835 MLL4855MLL4854MLR4812MSR4809MLL5188
MFLA265072 MFLA_0187MFLA_0186MFLA_2758MFLA_2760MFLA_0003
MEXT419610 MEXT_1636MEXT_1635MEXT_2351MEXT_2353MEXT_2577
MCAP243233 MCA_2843MCA_2844MCA_3037MCA_3034MCA_3035MCA_3030
MAQU351348 MAQU_0043MAQU_0042MAQU_3895MAQU_3898MAQU_3897MAQU_0005
LWEL386043 LWE1842LWE2777LWE2779LWE2778LWE0006
LPNE400673 LPC_0547LPC_0548LPC_3318LPC_3320LPC_3319LPC_0004
LPNE297246 LPP2648LPP2647LPP3074LPP3077LPP3076LPP0004
LPNE297245 LPL2518LPL2517LPL2930LPL2933LPL2932LPL0004
LPNE272624 LPG2595LPG2594LPG3002LPG3005LPG3004LPG0004
LMON265669 LMOF2365_1851LMOF2365_2844LMOF2365_2846LMOF2365_2845LMOF2365_0006
LMON169963 LMO1823LMO2854LMO2856LMO2855LMO0006
LINN272626 LIN1937LIN2986LIN2988LIN2987LIN0006
KPNE272620 GKPORF_B3027GKPORF_B3028GKPORF_B3458GKPORF_B3456GKPORF_B3457GKPORF_B3452
JSP375286 MMA_0143MMA_0144MMA_3694MMA_3697MMA_3696MMA_0003
JSP290400 JANN_0466JANN_0469JANN_0637JANN_0642JANN_0004
ILOI283942 IL0018IL0017IL2637IL2640IL2639IL0004
HSOM228400 HSM_1934HSM_1933HSM_2018HSM_2021HSM_2020HSM_1861
HSOM205914 HS_0041HS_0040HS_0133HS_0135AHS_0135HS_1708
HNEP81032 HNE_0512HNE_0513HNE_0414HNE_0412HNE_0552
HINF71421 HI_0622HI_0623HI_1001HI_0998HI_0999HI_0567
HINF374930 CGSHIEE_09120CGSHIEE_09115CGSHIEE_06970CGSHIEE_06980CGSHIEE_06975CGSHIEE_00130
HINF281310 NTHI0725NTHI0724NTHI1175NTHI1172NTHI1173NTHI0699
HHAL349124 HHAL_2323HHAL_2322HHAL_1230HHAL_1228HHAL_1229HHAL_1224
HDUC233412 HD_1889HD_2029HD_0040HD_0753HD_0752HD_1643
HCHE349521 HCH_00030HCH_00029HCH_07087HCH_10034HCH_00008
HARS204773 HEAR0118HEAR0119HEAR3469HEAR3472HEAR3471HEAR0005
GURA351605 GURA_0818GURA_0819GURA_4429GURA_4432GURA_4431GURA_0004
GTHE420246 GTNG_1024GTNG_1025GTNG_3442GTNG_3444GTNG_3443GTNG_0005
GSUL243231 GSU_0129GSU_0130GSU_3466GSU_3467.1GSU_0003
GMET269799 GMET_3338GMET_3339GMET_3561GMET_3564GMET_0004
GKAU235909 GK1171GK1172GK3496GK3498GK3497GK0005
GBET391165 GBCGDNIH1_0693GBCGDNIH1_0691GBCGDNIH1_0726GBCGDNIH1_0723GBCGDNIH1_0321
FTUL458234 FTA_0082FTA_1358FTA_0192FTA_0191FTA_1632
FTUL418136 FTW_1942FTW_0818FTW_1856FTW_1855FTW_1555
FTUL401614 FTN_0110FTN_0803FTN_0073FTN_0076FTN_0600
FTUL393115 FTF1675FTF0925FTF0233CFTF0236CFTF0510
FTUL393011 FTH_0070FTH_1257FTH_0172FTH_0169FTH_1497
FTUL351581 FTL_0074FTL_1285FTL_0178FTL_0175FTL_1547
FRANT DEF2FMTYIDCRPMHGYRB
FPHI484022 FPHI_0717FPHI_1814FPHI_0760FPHI_0757FPHI_0241
ESP42895 ENT638_3718ENT638_3719ENT638_4149ENT638_4152ENT638_4151ENT638_0004
EFER585054 EFER_3270EFER_3271EFER_4002EFER_3999EFER_4000EFER_3994
ECOO157 DEFFMTYIDCRPMHRNPAGYRB
ECOL83334 ECS4152ECS4153ECS4640ECS4638ECS4639ECS4634
ECOL585397 ECED1_3950ECED1_3951ECED1_4397ECED1_4394ECED1_4395ECED1_4390
ECOL585057 ECIAI39_3781ECIAI39_3782ECIAI39_4310ECIAI39_4307ECIAI39_4308ECIAI39_4303
ECOL585056 ECUMN_3760ECUMN_3761ECUMN_4237ECUMN_4234ECUMN_4235ECUMN_4230
ECOL585055 EC55989_3703EC55989_3704EC55989_4176EC55989_4173EC55989_4174EC55989_4168
ECOL585035 ECS88_3674ECS88_3675ECS88_4129ECS88_4126ECS88_4127ECS88_4122
ECOL585034 ECIAI1_3436ECIAI1_3437ECIAI1_3885ECIAI1_3882ECIAI1_3883ECIAI1_3877
ECOL481805 ECOLC_0427ECOLC_0426ECOLC_4289ECOLC_4292ECOLC_4291ECOLC_0004
ECOL469008 ECBD_0465ECBD_0464ECBD_4327ECBD_4330ECBD_4329ECBD_0004
ECOL439855 ECSMS35_3582ECSMS35_3583ECSMS35_4072ECSMS35_4070ECSMS35_4071ECSMS35_4064
ECOL413997 ECB_03137ECB_03138ECB_03589ECB_03586ECB_03587ECB_03582
ECOL409438 ECSE_3561ECSE_3562ECSE_3991ECSE_3989ECSE_3990ECSE_3985
ECOL405955 APECO1_3160APECO1_3159APECO1_2754APECO1_27542APECO1_2758
ECOL364106 UTI89_C3731UTI89_C3732UTI89_C4258UTI89_C4254UTI89_C4255UTI89_C4249
ECOL362663 ECP_3374ECP_3375ECP_3906ECP_3905ECP_3900
ECOL331111 ECE24377A_3769ECE24377A_3770ECE24377A_4215ECE24377A_4213ECE24377A_4214ECE24377A_4209
ECOL316407 ECK3273:JW3248:B3287ECK3274:JW3249:B3288ECK3698:JW3683:B3705ECK3695:JW3680:B3703ECK3696:JW3681:B3704ECK3691:JW5625:B3699
ECOL199310 C4047C4048C4629C4627C4628C4621
ECAR218491 ECA3999ECA4000ECA4445ECA4443ECA4444ECA4438
DVUL882 DVU_3366DVU_3365DVU_1077DVU_1074DVU_0003
DSHI398580 DSHI_0179DSHI_0181DSHI_0328DSHI_0333DSHI_3355
DPSY177439 DP0746DP0747DP0855DP0854DP0649
DOLE96561 DOLE_2233DOLE_2232DOLE_0102DOLE_0099DOLE_0100DOLE_0095
DNOD246195 DNO_0156DNO_0157DNO_0949DNO_0952DNO_0951DNO_0612
DARO159087 DARO_0021DARO_0022DARO_4201DARO_4204DARO_4203DARO_0003
CVIO243365 CV_4265CV_4264CV_4404CV_4406CV_0003
CVES412965 COSY_0868COSY_0715COSY_0941COSY_0938COSY_0939COSY_0003
CSP78 CAUL_4570CAUL_4568CAUL_0640CAUL_0642CAUL_0157
CSP501479 CSE45_0263CSE45_0078CSE45_0220CSE45_0225CSE45_3480
CSAL290398 CSAL_2867CSAL_2868CSAL_3316CSAL_3318CSAL_3317CSAL_0004
CRUT413404 RMAG_0967RMAG_0785RMAG_1040RMAG_1037RMAG_1038RMAG_0003
CPSY167879 CPS_0020CPS_0019CPS_5050CPS_5053CPS_5052CPS_0004
CJAP155077 CJA_3582CJA_3581CJA_3823CJA_3826CJA_3825CJA_0004
CHUT269798 CHU_0693CHU_1570CHU_2557CHU_0096CHU_0097CHU_1413
CDIF272563 CD2585CD2584CD3678CD3679CD0005
CBUR434922 COXBU7E912_1053COXBU7E912_2096COXBU7E912_0201COXBU7E912_0204COXBU7E912_0203COXBU7E912_0005
CBUR360115 COXBURSA331_A0945COXBURSA331_A0090COXBURSA331_A2122COXBURSA331_A2119COXBURSA331_A2120COXBURSA331_A0005
CBUR227377 CBU_0993CBU_1997CBU_1920CBU_1917CBU_1918CBU_0004
CBLO291272 BPEN_226BPEN_225BPEN_012BPEN_014BPEN_013BPEN_016
CBLO203907 BFL219BFL218BFL012BFL015BFL014BFL017
CAULO CC0272CC0279CC0767CC0769CC0160
BWEI315730 BCERKBAB4_3690BCERKBAB4_3689BCERKBAB4_4848BCERKBAB4_5281BCERKBAB4_5280BCERKBAB4_0005
BVIE269482 BCEP1808_3286BCEP1808_3285BCEP1808_3310BCEP1808_3313BCEP1808_3312BCEP1808_0003
BTRI382640 BT_0079BT_0078BT_1889BT_1887BT_0041
BTHU412694 BALH_3498BALH_3497BALH_4558BALH_4994BALH_0005
BTHU281309 BT9727_3608BT9727_3607BT9727_4731BT9727_5168BT9727_0005
BTHA271848 BTH_I0128BTH_I0129BTH_I3235BTH_I3238BTH_I3237BTH_I3241
BSUI470137 BSUIS_B1030BSUIS_B1029BSUIS_B1019BSUIS_B1017BSUIS_A0130
BSUI204722 BR_A1035BR_A1034BR_A1023BR_A1021BR_0125
BSUB BSU15720BSU15730BSU41040BSU41060BSU41050BSU00060
BSP376 BRADO0770BRADO0771BRADO0782BRADO0784BRADO0004
BSP36773 BCEP18194_A6478BCEP18194_A6477BCEP18194_A6520BCEP18194_A6523BCEP18194_A6522BCEP18194_A3184
BSP107806 BU496BU497BU015BU013BU014BU010
BQUI283165 BQ00690BQ00680BQ09780BQ09760BQ00370
BPUM315750 BPUM_1471BPUM_1472BPUM_3735BPUM_3737BPUM_3736BPUM_0006
BPSE320373 BURPS668_0150BURPS668_0151BURPS668_0093BURPS668_0090BURPS668_0091BURPS668_0087
BPSE320372 BURPS1710B_A0368BURPS1710B_A0369BURPS1710B_A0319BURPS1710B_A0316BURPS1710B_A0317BURPS1710B_A0312
BPSE272560 BPSL0121BPSL0122BPSL0078BPSL0076BPSL0073
BPET94624 BPET4727BPET4726BPET5011BPET5014BPET5013BPET0003
BPER257313 BP0552BP0551BP0495BP0492BP0493BP0489
BPAR257311 BPP0243BPP0244BPP4405BPP4402BPP4403BPP4399
BOVI236 GBOORFA1069GBOORFA1068GBOORFA1056GBOORFA1054GBOORF0128
BMEL359391 BAB2_0997BAB2_0996BAB2_0986BAB2_0984BAB1_0122
BMEL224914 BMEII0264BMEII0265BMEII0275BMEI0276BMEI1823
BMAL320389 BMA10247_2352BMA10247_2353BMA10247_3550BMA10247_3553BMA10247_3552BMA10247_0003
BMAL320388 BMASAVP1_A2806BMASAVP1_A2805BMASAVP1_A2844BMASAVP1_A2847BMASAVP1_A2846BMASAVP1_A2850
BMAL243160 BMA_0142BMA_0143BMA_3397BMA_3400BMA_3399BMA_0003
BLIC279010 BL02297BL02298BL00112BL05398BL00081
BJAP224911 BLL8109BLL8108BLR8098BSR8096BLL0823
BHEN283166 BH00760BH00750BH12410BH12390BH00410
BHAL272558 BH2508BH4064BH4066BH4065BH0006
BCLA66692 ABC2318ABC4119ABC4121ABC4120ABC0006
BCIC186490 BCI_0416BCI_0415BCI_0136BCI_0133BCI_0134BCI_0131
BCER572264 BCA_3967BCA_3966BCA_5168BCA_5643BCA_5642BCA_0005
BCER405917 BCE_3910BCE_3908BCE_5161BCE_5639BCE_5638BCE_0005
BCER315749 BCER98_2519BCER98_2518BCER98_3610BCER98_4028BCER98_4027BCER98_0005
BCER288681 BCE33L3626BCE33L3625BCE33L4746BCE33L5185BCE33L5184BCE33L0005
BCER226900 BC_3865BC_3864BC_5016BC_5490BC_5489BC_0005
BCEN331272 BCEN2424_3127BCEN2424_3126BCEN2424_3163BCEN2424_3166BCEN2424_3165BCEN2424_0003
BCEN331271 BCEN_2513BCEN_2512BCEN_2549BCEN_2552BCEN_2551BCEN_2555
BCAN483179 BCAN_B1055BCAN_B1054BCAN_B1044BCAN_B1042BCAN_A0128
BBRO257310 BB0247BB0248BB4993BB4990BB4991BB4987
BBAC360095 BARBAKC583_1319BARBAKC583_1320BARBAKC583_1048BARBAKC583_1046BARBAKC583_1346
BAPH372461 BCC_313BCC_007BCC_005BCC_006BCC_002
BAPH198804 BUSG477BUSG478BUSG016BUSG013BUSG014BUSG010
BANT592021 BAA_4029BAA_4028BAA_5294BAA_5772BAA_5771BAA_0005
BANT568206 BAMEG_0626BAMEG_0627BAMEG_5316BAMEG_5789BAMEG_5788BAMEG_0005
BANT261594 GBAA4005GBAA4004GBAA5263GBAA5738GBAA5737GBAA0005
BANT260799 BAS3718BAS3717BAS4889BAS5341BAS5340BAS0005
BAMY326423 RBAM_015550RBAM_015560RBAM_038140RBAM_038160RBAM_038150RBAM_000060
BAMB398577 BAMMC406_3065BAMMC406_3064BAMMC406_3099BAMMC406_3102BAMMC406_0003
BAMB339670 BAMB_3182BAMB_3181BAMB_3215BAMB_3218BAMB_3217BAMB_0003
BABO262698 BRUAB2_0975BRUAB2_0974BRUAB2_0963BRUAB2_0961BRUAB1_0122
ASP76114 EBB91EBA2954EBA2842EBC7EBB90EBA2848
ASP62977 ACIAD0211ACIAD3637ACIAD3681ACIAD3684ACIAD3683ACIAD0004
ASP62928 AZO0099AZO0100AZO3989AZO3992AZO3991AZO0003
ASAL382245 ASA_4140ASA_4141ASA_4382ASA_4385ASA_4384ASA_0004
APLE434271 APJL_1743APJL_1620APJL_1456APJL_1984APJL_1985APJL_0828
APLE416269 APL_1711APL_1587APL_1424APL_1938APL_1939APL_0821
AMET293826 AMET_2786AMET_2785AMET_4799AMET_4801AMET_0006
AHYD196024 AHA_0258AHA_0257AHA_4281AHA_4284AHA_4283AHA_0004
AFER243159 AFE_3005AFE_3004AFE_2992AFE_2989AFE_2990AFE_3021
AEHR187272 MLG_2628MLG_2627MLG_2882MLG_2884MLG_2883MLG_0004
ADEH290397 ADEH_0725ADEH_3969ADEH_4358ADEH_4360ADEH_0004
ACRY349163 ACRY_0409ACRY_0410ACRY_2141ACRY_2138ACRY_2886
ACAU438753 AZC_0798AZC_0797AZC_4053AZC_4055AZC_4054AZC_1009
ABOR393595 ABO_0131ABO_0130ABO_2753ABO_2755ABO_2754ABO_0004
ABAU360910 BAV0202BAV0203BAV3416BAV3413BAV3414BAV3410
ABAC204669 ACID345_4287ACID345_4228ACID345_0217ACID345_0219ACID345_0008


Organism features enriched in list (features available for 264 out of the 284 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00796993292
Disease:Bubonic_plague 0.008355566
Disease:Dysentery 0.008355566
Endospores:No 7.053e-2439211
GC_Content_Range4:0-40 3.107e-1257213
GC_Content_Range4:40-60 2.266e-6128224
GC_Content_Range4:60-100 0.002889779145
GC_Content_Range7:0-30 3.973e-6747
GC_Content_Range7:30-40 1.277e-650166
GC_Content_Range7:50-60 6.773e-975107
GC_Content_Range7:60-70 0.000231078134
Genome_Size_Range5:0-2 1.859e-1628155
Genome_Size_Range5:2-4 0.000406071197
Genome_Size_Range5:4-6 8.416e-21135184
Genome_Size_Range5:6-10 0.00362553047
Genome_Size_Range9:0-1 0.0071768627
Genome_Size_Range9:1-2 5.293e-1422128
Genome_Size_Range9:2-3 0.000025335120
Genome_Size_Range9:4-5 2.202e-86896
Genome_Size_Range9:5-6 1.486e-106788
Genome_Size_Range9:6-8 0.00059132738
Gram_Stain:Gram_Neg 4.978e-32219333
Gram_Stain:Gram_Pos 1.211e-1626150
Habitat:Multiple 0.001530396178
Habitat:Specialized 0.00021991253
Habitat:Terrestrial 0.00547932131
Motility:No 2.610e-1923151
Motility:Yes 3.194e-11160267
Optimal_temp.:- 0.0000509139257
Optimal_temp.:25-30 0.00041581619
Optimal_temp.:30-37 0.0082479318
Optimal_temp.:35-37 0.00002851313
Optimal_temp.:37 0.000425533106
Oxygen_Req:Aerobic 0.002845198185
Oxygen_Req:Anaerobic 2.339e-1117102
Oxygen_Req:Facultative 0.0000435113201
Pathogenic_in:Animal 0.00153274166
Salinity:Non-halophilic 0.005100837106
Shape:Coccobacillus 0.00014621111
Shape:Coccus 2.451e-101282
Shape:Rod 1.646e-24216347
Shape:Sphere 0.0010755219
Shape:Spiral 0.0000173434
Temp._range:Hyperthermophilic 0.0000134123
Temp._range:Mesophilic 0.0010887228473
Temp._range:Psychrophilic 0.000742299
Temp._range:Thermophilic 0.0000574535



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 146
Effective number of orgs (counting one per cluster within 468 clusters): 133

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 131
UURE95664 Ureaplasma urealyticum serovar 101
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278151
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TERY203124 ncbi Trichodesmium erythraeum IMS1011
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4400
STOK273063 ncbi Sulfolobus tokodaii 70
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93111
SSP1131 Synechococcus sp. CC96051
SSOL273057 ncbi Sulfolobus solfataricus P20
SPNE170187 ncbi Streptococcus pneumoniae G541
SMAR399550 ncbi Staphylothermus marinus F10
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23380
SCO ncbi Streptomyces coelicolor A3(2)1
SAVE227882 ncbi Streptomyces avermitilis MA-46801
SARE391037 ncbi Salinispora arenicola CNS-2050
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSP101510 ncbi Rhodococcus jostii RHA10
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332090
PTOR263820 ncbi Picrophilus torridus DSM 97900
PRUM264731 ncbi Prevotella ruminicola 231
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PMAR146891 ncbi Prochlorococcus marinus AS96011
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma1
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE50
NSP35761 Nocardioides sp.0
NSP103690 ncbi Nostoc sp. PCC 71201
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NFAR247156 ncbi Nocardia farcinica IFM 101520
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-10
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 531
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS0
MSP164757 ncbi Mycobacterium sp. JLS0
MSP164756 ncbi Mycobacterium sp. MCS0
MSME246196 ncbi Mycobacterium smegmatis MC2 1550
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP1
MPNE272634 ncbi Mycoplasma pneumoniae M1291
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2321
MHYO262722 ncbi Mycoplasma hyopneumoniae 74481
MHYO262719 ncbi Mycoplasma hyopneumoniae J1
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G371
MFLO265311 ncbi Mesoplasma florum L11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MAVI243243 ncbi Mycobacterium avium 1040
MART243272 ncbi Mycoplasma arthritidis 158L3-11
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199770
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LCAS321967 ncbi Lactobacillus casei ATCC 3340
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R11
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237791
FSP1855 Frankia sp. EAN1pec0
FSP106370 ncbi Frankia sp. CcI30
FJOH376686 ncbi Flavobacterium johnsoniae UW1011
FALN326424 ncbi Frankia alni ACN14a0
DRAD243230 ncbi Deinococcus radiodurans R11
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEI306537 ncbi Corynebacterium jeikeium K4110
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CEFF196164 ncbi Corynebacterium efficiens YS-3140
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1351
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB1
AVAR240292 ncbi Anabaena variabilis ATCC 294131
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
AMAR329726 ncbi Acaryochloris marina MBIC110170
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACEL351607 ncbi Acidothermus cellulolyticus 11B0
AAUR290340 ncbi Arthrobacter aurescens TC10


Names of the homologs of the genes in the group in each of these orgs
  EG11440   EG11268   EG11197   EG10892   EG10862   EG10424   
UURE95667 UU604
UURE95664 UUR10_0709
UPAR505682 UPA3_0644
UMET351160 RCIX59
TWHI218496
TWHI203267
TVOL273116
TTHE300852 TTHA0443
TTHE262724 TT_C0075
TPEN368408
TPAL243276 TP_0951
TKOD69014
TERY203124 TERY_1769
TELO197221 TLR1874
TACI273075
STRO369723
STOK273063
SSUI391295 SSU05_2015
SSP84588
SSP64471 GSYN0101
SSP1131 SYNCC9605_2274
SSOL273057
SPNE170187 SPN02038
SMAR399550
SERY405948
SCO SCO1473
SAVE227882 SAV6877
SARE391037
SACI330779
RSP101510
RSAL288705
PTOR263820
PRUM264731 GFRORF2238
PMAR93060 P9215_00801
PMAR74547
PMAR74546 PMT9312_0070
PMAR59920 PMN2A_1431
PMAR167555 NATL1_01321
PMAR167546 P9301ORF_0082
PMAR167542 P9515ORF_0080
PMAR167540 PMM0068
PMAR167539 PRO_0081
PMAR146891 A9601_00801
PISL384616
PHOR70601
PFUR186497
PAST100379 PAM247
PARS340102
PAER178306
PACN267747 PPA2353
PABY272844
NSP35761
NSP103690 ALR3079
NPHA348780
NFAR247156
MVAN350058
MTUB419947
MTUB336982
MTHE349307 MTHE_1393
MTHE187420
MTBRV
MTBCDC
MSYN262723 MS53_0601
MSTA339860
MSP189918
MSP164757
MSP164756
MSME246196
MSED399549
MPUL272635 MYPU_1540
MPNE272634 MPN682
MPEN272633
MMYC272632 MSC_1068
MMOB267748 MMOB6320
MMAZ192952 MM2419
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631
MKAN190192
MJAN243232
MHYO295358 MHP699
MHYO262722 MHP7448_0678
MHYO262719 MHJ_0676
MHUN323259
MGIL350054
MGEN243273 MG_466
MFLO265311 MFL682.1
MCAP340047 MCAP_0870
MBUR259564 MBUR_0419
MBOV410289
MBOV233413
MBAR269797 MBAR_A2805
MAVI243243
MART243272 MART0748
MAEO419665
MACE188937 MA1584
MABS561007
LXYL281090
LREU557436 LREU_1944
LPLA220668 LP_1616
LLAC272623 L133770
LLAC272622 LACR_0132
LCAS321967
KRAD266940 KRAD_2984
IHOS453591
HWAL362976 HQ2652A
HSP64091
HSAL478009 OE2303F
HMUK485914 HMUK_2729
HMAR272569 RRNAC0456
HBUT415426
HAUR316274 HAUR_4832
FSP1855
FSP106370
FJOH376686 FJOH_0100
FALN326424
DRAD243230 DR_2152
DGEO319795 DGEO_1568
CSUL444179 SMGWSS_153
CMIC443906
CMIC31964
CMET456442
CMAQ397948
CKOR374847
CJEI306537
CGLU196627
CEFF196164
CDIP257309
BXEN266265
BTUR314724 BT0440
BLON206672 BL1789
BHER314723 BH0440
AYEL322098 AYWB_474
AVAR240292 AVA_0830
AURANTIMONAS
ASP1667
APER272557
ANAE240017
AMAR329726
ALAI441768 ACL_1433
AFUL224325
ACEL351607
AAUR290340


Organism features enriched in list (features available for 136 out of the 146 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.005766269
Arrangment:Chains 0.00060631092
Arrangment:Filaments 0.0000129910
Arrangment:Pairs 0.007055517112
Arrangment:Singles 0.000481983286
Disease:None 0.00762882158
Endospores:No 1.283e-1386211
GC_Content_Range4:60-100 0.006696744145
GC_Content_Range7:70-100 0.0000554911
Genome_Size_Range5:0-2 0.000051254155
Genome_Size_Range5:4-6 2.606e-720184
Genome_Size_Range9:0-1 6.235e-61727
Genome_Size_Range9:4-5 0.00028841096
Genome_Size_Range9:5-6 0.00123411088
Genome_Size_Range9:8-10 0.005766269
Gram_Stain:Gram_Neg 3.490e-2427333
Gram_Stain:Gram_Pos 0.002655347150
Habitat:Aquatic 0.00002733791
Habitat:Host-associated 0.009702738206
Habitat:Multiple 0.001197628178
Habitat:Specialized 0.00036722353
Motility:No 1.706e-861151
Motility:Yes 0.000053743267
Optimal_temp.:- 0.000527444257
Optimal_temp.:85 0.002861844
Oxygen_Req:Anaerobic 0.003707234102
Oxygen_Req:Facultative 0.000325831201
Pathogenic_in:Animal 0.0000778466
Pathogenic_in:Human 3.587e-824213
Pathogenic_in:No 0.000023373226
Salinity:Extreme_halophilic 0.008190157
Shape:Branched_filament 0.002861844
Shape:Filament 0.008190157
Shape:Irregular_coccus 1.494e-81517
Shape:Rod 7.526e-1345347
Shape:Sphere 8.528e-101719
Temp._range:Hyperthermophilic 1.945e-71723
Temp._range:Mesophilic 0.000516397473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 9
Effective number of orgs (counting one per cluster within 468 clusters): 8

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum) 0.00213826216
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum) 0.00253986396
CBLO203907 ncbi Candidatus Blochmannia floridanus 0.00297496566
BCIC186490 Candidatus Baumannia cicadellinicola 0.00353316756
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN 0.00410406926
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri) 0.00504663515
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA 0.00575657326
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00693507556
RPRO272947 ncbi Rickettsia prowazekii Madrid E 0.00841083895


Names of the homologs of the genes in the group in each of these orgs
  EG11440   EG11268   EG11197   EG10892   EG10862   EG10424   
BAPH198804 BUSG477BUSG478BUSG016BUSG013BUSG014BUSG010
BSP107806 BU496BU497BU015BU013BU014BU010
CBLO203907 BFL219BFL218BFL012BFL015BFL014BFL017
BCIC186490 BCI_0416BCI_0415BCI_0136BCI_0133BCI_0134BCI_0131
CBLO291272 BPEN_226BPEN_225BPEN_012BPEN_014BPEN_013BPEN_016
BAPH372461 BCC_313BCC_007BCC_005BCC_006BCC_002
CVES412965 COSY_0868COSY_0715COSY_0941COSY_0938COSY_0939COSY_0003
CRUT413404 RMAG_0967RMAG_0785RMAG_1040RMAG_1037RMAG_1038RMAG_0003
RPRO272947 RP208RP209RP048RP610RP580


Organism features enriched in list (features available for 8 out of the 9 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
GC_Content_Range4:0-40 0.00029178213
GC_Content_Range7:0-30 4.881e-6647
Genome_Size_Range5:0-2 0.00002188155
Genome_Size_Range9:0-1 1.448e-7627
Optimal_temp.:- 0.00134058257
Pathogenic_in:No 0.00615707226



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002400.6659
GLYCOCAT-PWY (glycogen degradation I)2462110.6518
PWY-5918 (heme biosynthesis I)2722230.6434
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912320.6417
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962330.6329
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862280.6314
PWY-1269 (CMP-KDO biosynthesis I)3252440.6184
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902260.6061
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251900.5866
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951730.5846
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181850.5786
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482450.5605
PWY-5913 (TCA cycle variation IV)3012220.5468
DAPLYSINESYN-PWY (lysine biosynthesis I)3422380.5317
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262310.5316
TYRFUMCAT-PWY (tyrosine degradation I)1841580.5236
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491370.5219
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831570.5206
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392340.5142
PWY-4041 (γ-glutamyl cycle)2792060.5108
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162630.5020
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911570.4888
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911570.4888
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982530.4802
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761470.4780
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222610.4731
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)1121070.4695
KDOSYN-PWY (KDO transfer to lipid IVA I)1801480.4689
AST-PWY (arginine degradation II (AST pathway))1201120.4683
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791470.4658
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96950.4574
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551860.4572
PWY-5028 (histidine degradation II)1301160.4500
PWY0-501 (lipoate biosynthesis and incorporation I)3852430.4477
PWY-5386 (methylglyoxal degradation I)3052080.4446
PWY-5188 (tetrapyrrole biosynthesis I)4392620.4371
PWY-5340 (sulfate activation for sulfonation)3852410.4344
VALDEG-PWY (valine degradation I)2901990.4316
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292160.4262
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491780.4243
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491780.4243
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652310.4227
REDCITCYC (TCA cycle variation II)1741380.4215
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561270.4157
PWY-5148 (acyl-CoA hydrolysis)2271650.4120
P601-PWY (D-camphor degradation)95890.4096
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3112050.4075
PWY-3162 (tryptophan degradation V (side chain pathway))94880.4065
GLUTAMINDEG-PWY (glutamine degradation I)1911450.4049
PWY-5194 (siroheme biosynthesis)3122050.4046



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11268   EG11197   EG10892   EG10862   EG10424   
EG114400.9999890.9989660.9988540.998650.998646
EG112680.9990130.9988220.9985810.998615
EG111970.9999350.9999130.99974
EG108920.9999310.999694
EG108620.999762
EG10424



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PAIRWISE BLAST SCORES:

  EG11440   EG11268   EG11197   EG10892   EG10862   EG10424   
EG114400.0f0-----
EG11268-0.0f0----
EG11197--0.0f0---
EG10892---0.0f0--
EG10862----0.0f0-
EG10424-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10862 EG10892 EG11197 (centered at EG10862)
EG11268 EG11440 (centered at EG11268)
EG10424 (centered at EG10424)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11440   EG11268   EG11197   EG10892   EG10862   EG10424   
378/623410/623397/623390/623285/623420/623
AAEO224324:0:Tyes29213790---
AAVE397945:0:Tyes460246044703--0
ABAC204669:0:Tyes43164255210-2120
ABAU360910:0:Tyes013224322132223218
ABOR393595:0:Tyes1271262791279327920
ABUT367737:0:Tyes1691-16141616-0
ACAU438753:0:Tyes10329432963295217
ACRY349163:8:Tyes0117381735-2489
ADEH290397:0:Tyes72540034391-43930
AEHR187272:0:Tyes260526042859286128600
AFER243159:0:Tyes161530132
AHYD196024:0:Tyes2352344114411741160
ALAI441768:0:Tyes---0--
AMAR234826:0:Tyes565-0302-135
AMET293826:0:Tyes273327324754-47560
AORE350688:0:Tyes142614272941--0
APHA212042:0:Tyes992-2190-385
APLE416269:0:Tyes926797619115811590
APLE434271:0:Tno957829649120612070
ASAL382245:5:Tyes398739884222422542240
ASP232721:2:Tyes0286--92
ASP62928:0:Tyes96974048405140500
ASP62977:0:Tyes19933723416341934180
ASP76114:2:Tyes70690326
AVAR240292:3:Tyes0-----
AYEL322098:4:Tyes---0--
BABO262698:0:Tno131220--
BABO262698:1:Tno-----0
BAFZ390236:2:Fyes--20--
BAMB339670:3:Tno326232613296329932980
BAMB398577:3:Tno3107310631413144-0
BAMY326423:0:Tyes154515463802380438030
BANT260799:0:Tno376737664956540954080
BANT261594:2:Tno366136604855529852970
BANT568206:2:Tyes5425435112557455730
BANT592021:2:Tno388038795101556855670
BAPH198804:0:Tyes4674686340
BAPH372461:0:Tyes307-5340
BBAC264462:0:Tyes254425433614--0
BBAC360095:0:Tyes24824920-274
BBRO257310:0:Tyes014794479147924788
BBUR224326:21:Fno--20--
BCAN483179:0:Tno131220--
BCAN483179:1:Tno-----0
BCEN331271:2:Tno1038414044
BCEN331272:3:Tyes311831173153315631550
BCER226900:1:Tyes378237814910537153700
BCER288681:0:Tno368636854823526452630
BCER315749:1:Tyes237423733428382838270
BCER405917:1:Tyes369436924896535353520
BCER572264:1:Tno378637854943540754060
BCIC186490:0:Tyes2582575230
BCLA66692:0:Tyes-23724184418641850
BFRA272559:1:Tyes-33382303173-0
BFRA295405:0:Tno-36552344192-0
BGAR290434:2:Fyes--20--
BHAL272558:0:Tyes-25844160416241610
BHEN283166:0:Tyes313011191117-0
BHER314723:0:Fyes---0--
BJAP224911:0:Fyes7332733173217319-0
BLIC279010:0:Tyes1737173842374239-0
BLON206672:0:Tyes-0----
BMAL243160:1:Tno1351363062306530640
BMAL320388:1:Tno1038414044
BMAL320389:1:Tyes229522963467347034690
BMEL224914:0:Tno011113--
BMEL224914:1:Tno-----0
BMEL359391:0:Tno121120--
BMEL359391:1:Tno-----0
BOVI236:0:Tyes151420--
BOVI236:1:Tyes-----0
BPAR257311:0:Tno013987398439853981
BPER257313:0:Tyes58576340
BPET94624:0:Tyes477447735062506550640
BPSE272560:1:Tyes49505-30
BPSE320372:1:Tno55567450
BPSE320373:1:Tno59606340
BPUM315750:0:Tyes150715083766376837670
BQUI283165:0:Tyes3130841839-0
BSP107806:2:Tyes4784795340
BSP36773:2:Tyes335233513395339833970
BSP376:0:Tyes715716726728-0
BSUB:0:Tyes171317144355435743560
BSUI204722:0:Tyes141320--
BSUI204722:1:Tyes-----0
BSUI470137:0:Tno131220--
BSUI470137:1:Tno-----0
BTHA271848:1:Tno013044304730463050
BTHE226186:0:Tyes03600-3355--
BTHU281309:1:Tno356335624675-51120
BTHU412694:1:Tno338133804424-48350
BTRI382640:1:Tyes313016131611-0
BTUR314724:0:Fyes---0--
BVIE269482:7:Tyes324532443268327132700
BWEI315730:4:Tyes370437034867530052990
CABO218497:0:Tyes----3050
CACE272562:1:Tyes174317443769--0
CAULO:0:Tyes113120612614-0
CBEI290402:0:Tyes11311132---0
CBLO203907:0:Tyes2042030325
CBLO291272:0:Tno2102090214
CBOT36826:1:Tno247224713600--0
CBOT441770:0:Tyes228322823553--0
CBOT441771:0:Tno225722563422--0
CBOT441772:1:Tno243424333630--0
CBOT498213:1:Tno242224213650--0
CBOT508765:1:Tyes11391140---0
CBOT515621:2:Tyes263726363796--0
CBOT536232:0:Tno266826673909--0
CBUR227377:1:Tyes94519171842183918400
CBUR360115:1:Tno889822006200320040
CBUR434922:2:Tno100019981861891880
CCAV227941:1:Tyes---3263270
CCHL340177:0:Tyes--20142017-0
CCON360104:2:Tyes0-722719--
CCUR360105:0:Tyes147-1198--0
CDES477974:0:Tyes-15622202-22040
CDIF272563:1:Tyes263426333737-37390
CFEL264202:1:Tyes---10340
CFET360106:0:Tyes1641-539537-0
CHOM360107:1:Tyes14-634631-0
CHUT269798:0:Tyes59014512422011294
CHYD246194:0:Tyes144414430--2615
CJAP155077:0:Tyes351235113752375537540
CJEJ192222:0:Tyes--918921-0
CJEJ195099:0:Tno--10021005-0
CJEJ354242:2:Tyes--908911-0
CJEJ360109:0:Tyes--762759-0
CJEJ407148:0:Tno--930933-0
CKLU431943:1:Tyes13181319---0
CMUR243161:1:Tyes---10293
CNOV386415:0:Tyes10---976
CPEL335992:0:Tyes10-20--0
CPER195102:1:Tyes178117802774--0
CPER195103:0:Tno195219512870--0
CPER289380:3:Tyes166916682551--0
CPHY357809:0:Tyes24632462--39060
CPNE115711:1:Tyes--046947035
CPNE115713:0:Tno--356746730
CPNE138677:0:Tno--356796780
CPNE182082:0:Tno--377077060
CPRO264201:0:Fyes-0--1225688
CPSY167879:0:Tyes16154904490749060
CRUT413404:0:Tyes9027299779749750
CSAL290398:0:Tyes291329143366336833670
CSP501479:7:Fyes-----0
CSP501479:8:Fyes1810139144--
CSP78:2:Tyes44484446481483-0
CSUL444179:0:Tyes---0--
CTEP194439:0:Tyes--30-2229
CTET212717:0:Tyes10441045---0
CTRA471472:0:Tyes---10284
CTRA471473:0:Tno---10284
CVES412965:0:Tyes8316858988958960
CVIO243365:0:Tyes438443834523-45250
DARO159087:0:Tyes18194232423542340
DDES207559:0:Tyes10112431--0
DETH243164:0:Tyes0841----
DGEO319795:1:Tyes---0--
DHAF138119:0:Tyes273527345111--0
DNOD246195:0:Tyes01764767766446
DOLE96561:0:Tyes216521647450
DPSY177439:2:Tyes115116224-2230
DRAD243230:3:Tyes---0--
DRED349161:0:Tyes173017313367--0
DSHI398580:5:Tyes02150156-3218
DSP216389:0:Tyes0725----
DSP255470:0:Tno0877----
DVUL882:1:Tyes3346334510701067-0
ECAN269484:0:Tyes0-260551-388
ECAR218491:0:Tyes01456454455449
ECHA205920:0:Tyes--3220-172
ECOL199310:0:Tno01575573574569
ECOL316407:0:Tno4224210327
ECOL331111:6:Tno01438436437432
ECOL362663:0:Tno01525-524519
ECOL364106:1:Tno01524520521515
ECOL405955:2:Tyes01417-416412
ECOL409438:6:Tyes01431429430425
ECOL413997:0:Tno01445442443438
ECOL439855:4:Tno01486484485478
ECOL469008:0:Tno4534524329433243310
ECOL481805:0:Tno4174164317432043190
ECOL585034:0:Tno01439436437431
ECOL585035:0:Tno01440437438433
ECOL585055:0:Tno01458455456451
ECOL585056:2:Tno01465462463458
ECOL585057:0:Tno01516513514509
ECOL585397:0:Tno01427424425420
ECOL83334:0:Tno01490488489484
ECOLI:0:Tno01431428429424
ECOO157:0:Tno01496494495490
EFAE226185:3:Tyes-2927-312231210
EFER585054:1:Tyes01709706707702
ELIT314225:0:Tyes301739--1962
ERUM254945:0:Tyes0-289--420
ERUM302409:0:Tno0-285--416
ESP42895:1:Tyes375537564193419641950
FJOH376686:0:Tyes---0--
FMAG334413:1:Tyes0--980979-
FNOD381764:0:Tyes--032-
FNUC190304:0:Tyes-14850---
FPHI484022:1:Tyes4921627535532-0
FRANT:0:Tno134665403-268
FSUC59374:0:Tyes-5040---
FTUL351581:0:Tno010709390-1306
FTUL393011:0:Tno09878178-1181
FTUL393115:0:Tyes132164603-261
FTUL401614:0:Tyes3772303-523
FTUL418136:0:Tno9030835834-583
FTUL458234:0:Tno010229190-1236
GBET391165:0:Tyes371370405402-0
GFOR411154:0:Tyes---0-1676
GKAU235909:1:Tyes124212433605360736060
GMET269799:1:Tyes3338333935603563-0
GOXY290633:5:Tyes181818171809--0
GSUL243231:0:Tyes12612734453447-0
GTHE420246:1:Tyes100810093385338733860
GURA351605:0:Tyes8138144407441044090
GVIO251221:0:Tyes4010----
HACI382638:1:Tyes686-0---
HARS204773:0:Tyes1101113276327932780
HAUR316274:2:Tyes-0----
HCHE349521:0:Tyes23226835-68360
HDUC233412:0:Tyes1612173606286271403
HHAL349124:0:Tyes110211016450
HHEP235279:0:Tyes472-04-1047
HINF281310:0:Tyes26254384354360
HINF374930:0:Tyes158715861195119711960
HINF71421:0:Tno53544304274280
HMAR272569:8:Tyes-----0
HMOD498761:0:Tyes106210630--9
HMUK485914:1:Tyes-----0
HNEP81032:0:Tyes10010120-139
HPY:0:Tno0-671---
HPYL357544:1:Tyes0-620---
HPYL85963:0:Tno0-611---
HSAL478009:4:Tyes-----0
HSOM205914:1:Tyes109194931667
HSOM228400:0:Tno75741591621610
HWAL362976:1:Tyes-----0
ILOI283942:0:Tyes14132691269426930
JSP290400:1:Tyes467470639644-0
JSP375286:0:Tyes1401413744374737460
KPNE272620:2:Tyes01429427428423
KRAD266940:2:Fyes-0----
LACI272621:0:Tyes-0629---
LBIF355278:2:Tyes--274--0
LBIF456481:2:Tno--286--0
LBOR355276:1:Tyes--26472649-0
LBOR355277:1:Tno--128126-0
LBRE387344:2:Tyes-0-1265--
LCHO395495:0:Tyes3513524414--0
LDEL321956:0:Tyes-0582---
LDEL390333:0:Tyes-0597---
LGAS324831:0:Tyes-01018---
LHEL405566:0:Tyes-0511---
LINN272626:1:Tno-19683043304530440
LINT189518:1:Tyes--178175-0
LINT267671:1:Tno--149147-0
LINT363253:3:Tyes10304--19
LJOH257314:0:Tyes-0564---
LLAC272622:5:Tyes---0--
LLAC272623:0:Tyes---0--
LMES203120:1:Tyes---10-
LMON169963:0:Tno-18602922292429230
LMON265669:0:Tyes-18262813281528140
LPLA220668:0:Tyes-0----
LPNE272624:0:Tno258525842987299029890
LPNE297245:1:Fno251025092925292829270
LPNE297246:1:Fyes264326423074307730760
LPNE400673:0:Tno5345353253325532540
LREU557436:0:Tyes---0--
LSAK314315:0:Tyes-0--1218-
LSPH444177:1:Tyes-1513-4692-0
LWEL386043:0:Tyes-18362771277327720
MACE188937:0:Tyes-----0
MAER449447:0:Tyes0----3404
MAQU351348:2:Tyes37363850385338520
MART243272:0:Tyes---0--
MBAR269797:1:Tyes-----0
MBUR259564:0:Tyes-----0
MCAP243233:0:Tyes01187184185180
MCAP340047:0:Tyes---0--
MEXT419610:0:Tyes10716718-943
MFLA265072:0:Tyes1841832747-27490
MFLO265311:0:Tyes---0--
MGEN243273:0:Tyes---0--
MHYO262719:0:Tyes---0--
MHYO262722:0:Tno---0--
MHYO295358:0:Tno---0--
MLAB410358:0:Tyes-0---220
MLOT266835:2:Tyes383720-300
MMAG342108:0:Tyes1041144111-397
MMAR394221:0:Tyes425429441--0
MMAZ192952:0:Tyes-----0
MMOB267748:0:Tyes---0--
MMYC272632:0:Tyes---0--
MPET420662:1:Tyes2802813815--0
MPNE272634:0:Tyes---0--
MPUL272635:0:Tyes---0--
MSP266779:3:Tyes20192013244
MSP400668:0:Tyes13124543454545440
MSP409:2:Tyes10833831-1080
MSUC221988:0:Tyes177217730321820
MSYN262723:0:Tyes---0--
MTHE264732:0:Tyes8678682456--0
MTHE349307:0:Tyes-----0
MXAN246197:0:Tyes113111017008701170100
NARO279238:0:Tyes2360235830-2780
NEUR228410:0:Tyes200520063994024010
NEUT335283:2:Tyes3873862124212121220
NGON242231:0:Tyes100993803843830
NHAM323097:2:Tyes3571357235813583-0
NMEN122586:0:Tno01173117281729101
NMEN122587:0:Tyes1131124804834820
NMEN272831:0:Tno0119720019995
NMEN374833:0:Tno170617050321595
NMUL323848:3:Tyes3903892751-27530
NOCE323261:1:Tyes294229433015301730160
NSEN222891:0:Tyes--0434-308
NSP103690:6:Tyes0-----
NSP387092:0:Tyes166-911908-0
NWIN323098:0:Tyes309030913100310231010
OANT439375:5:Tyes1228122912451247-0
OCAR504832:0:Tyes3006300529962994-0
OIHE221109:0:Tyes-15763576357835770
OTSU357244:0:Fyes2512500--4
PACN267747:0:Tyes---0--
PAER208963:0:Tyes15145959-59600
PAER208964:0:Tno15145635563756360
PARC259536:0:Tyes2621602165216821670
PAST100379:0:Tyes---0--
PATL342610:0:Tyes19184343434643450
PCAR338963:0:Tyes2432423166316931680
PCRY335284:1:Tyes3724592465105
PDIS435591:0:Tyes--0--3014
PENT384676:0:Tyes18175212521552140
PFLU205922:0:Tyes13125806-58080
PFLU216595:1:Tyes14135914591659150
PFLU220664:0:Tyes181761186119-0
PGIN242619:0:Tyes---0-901
PHAL326442:1:Tyes19183037304130400
PING357804:0:Tyes013346334333443444
PINT246198:1:Tyes---108-0
PLUM243265:0:Fyes477747784998500150000
PLUT319225:0:Tyes--20692072-0
PMAR146891:0:Tyes0-----
PMAR167539:0:Tyes0-----
PMAR167540:0:Tyes0-----
PMAR167542:0:Tyes0-----
PMAR167546:0:Tyes0-----
PMAR167555:0:Tyes0-----
PMAR59920:0:Tno0-----
PMAR74546:0:Tyes0-----
PMAR93060:0:Tyes0-----
PMEN399739:0:Tyes50494668467146700
PMOB403833:0:Tyes01-563--
PMUL272843:1:Tyes397398301314
PNAP365044:8:Tyes10230--236
PPEN278197:0:Tyes-0-977--
PPRO298386:2:Tyes356435650-18
PPUT160488:0:Tno62610327
PPUT351746:0:Tyes78775343-53450
PPUT76869:0:Tno83825506105
PRUM264731:0:Tyes---0--
PSP117:0:Tyes--455-0-
PSP296591:2:Tyes460546044865--0
PSP312153:0:Tyes2108210721142117-0
PSP56811:2:Tyes4124362441024434
PSTU379731:0:Tyes17164190419341920
PSYR205918:0:Tyes15145150515351520
PSYR223283:2:Tyes1731745544554755460
PTHE370438:0:Tyes183418332971-29720
RAKA293614:0:Fyes213-0822-777
RALB246199:0:Tyes-281-0--
RBEL336407:0:Tyes5615620872-1006
RBEL391896:0:Fno589-0474-679
RCAN293613:0:Fyes1911920303-350
RCAS383372:0:Tyes-178540-2744
RCON272944:0:Tno2082090884-830
RDEN375451:4:Tyes1048105011611166-0
RETL347834:5:Tyes3943964194214200
REUT264198:3:Tyes343734363489349234910
REUT381666:2:Tyes360136003645364836470
RFEL315456:2:Tyes2002010224-836
RFER338969:1:Tyes385738564239--0
RLEG216596:6:Tyes430433453-4540
RMAS416276:1:Tyes164-0661-627
RMET266264:2:Tyes354835473596-35980
RPAL258594:0:Tyes627628638640-0
RPAL316055:0:Tyes648647636634-0
RPAL316056:0:Tyes801804815817-0
RPAL316057:0:Tyes787766--0
RPAL316058:0:Tyes679680689691-0
RPOM246200:1:Tyes29972994367373-0
RPRO272947:0:Tyes1581590557-528
RRIC392021:0:Fno210-0863-813
RRIC452659:0:Tyes2202210904-854
RRUB269796:1:Tyes3335333633243321-0
RSOL267608:1:Tyes69713013504
RSP357808:0:Tyes-383438773879-0
RSPH272943:4:Tyes03196191-476
RSPH349101:2:Tno2540254327362731-0
RSPH349102:5:Tyes141144283764-0
RTYP257363:0:Tno115-0515-486
RXYL266117:0:Tyes--2312-31940
SACI56780:0:Tyes-9721162-11640
SAGA205921:0:Tno-0-137889-
SAGA208435:0:Tno-0-144692-
SAGA211110:0:Tyes-0-1521144-
SALA317655:1:Tyes2452430--2994
SAUR158878:1:Tno-1233-278327820
SAUR158879:1:Tno-1114-266626650
SAUR196620:0:Tno-1121-270727060
SAUR273036:0:Tno-1054-257025690
SAUR282458:0:Tno-1153-275127500
SAUR282459:0:Tno-1171-267226710
SAUR359786:1:Tno-1281--27720
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