CANDIDATE ID: 437

CANDIDATE ID: 437

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9909947e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7530 (rdgB) (b2954)
   Products of gene:
     - G7530-MONOMER (RdgB)
     - CPLX0-7826 (dITP/XTP pyrophosphatase)
       Reactions:
        ITP + H2O  ->  inosine-5'-phosphate + diphosphate + H+
        dITP + H2O  ->  dIMP + diphosphate + H+
        XTP + H2O  ->  xanthosine-5-phosphate + diphosphate + H+

- G7527 (yggS) (b2951)
   Products of gene:
     - G7527-MONOMER (predicted enzyme)

- G7526 (yggR) (b2950)
   Products of gene:
     - G7526-MONOMER (predicted transporter)

- G7525 (yqgF) (b2949)
   Products of gene:
     - G7525-MONOMER (predicted Holliday junction resolvase)

- G7524 (yqgE) (b2948)
   Products of gene:
     - G7524-MONOMER (predicted protein)

- EG10419 (gshB) (b2947)
   Products of gene:
     - GLUTATHIONE-SYN-MONOMER (glutathione synthetase monomer)
     - GLUTATHIONE-SYN-CPLX (glutathione synthetase)
       Reactions:
        glycine + L-gamma-glutamylcysteine + ATP  ->  glutathione + phosphate + ADP + 2 H+
         In pathways
         PWY-4041 (PWY-4041)
         GLUTATHIONESYN-PWY (glutathione biosynthesis)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 188
Effective number of orgs (counting one per cluster within 468 clusters): 123

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola6
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A6
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110186
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103316
XFAS405440 ncbi Xylella fastidiosa M126
XFAS183190 ncbi Xylella fastidiosa Temecula16
XFAS160492 ncbi Xylella fastidiosa 9a5c6
XCAM487884 Xanthomonas campestris pv. paulliniae6
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-106
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80046
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339136
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3066
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1146
VEIS391735 ncbi Verminephrobacter eiseniae EF01-26
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TTUR377629 ncbi Teredinibacter turnerae T79016
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252596
TCRU317025 ncbi Thiomicrospira crunogena XCL-26
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
SSP94122 ncbi Shewanella sp. ANA-36
SSP1148 ncbi Synechocystis sp. PCC 68035
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB36
SPRO399741 ncbi Serratia proteamaculans 5686
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SONE211586 ncbi Shewanella oneidensis MR-16
SLOI323850 ncbi Shewanella loihica PV-46
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-406
SBOY300268 ncbi Shigella boydii Sb2276
SBAL402882 ncbi Shewanella baltica OS1856
SBAL399599 ncbi Shewanella baltica OS1956
SALA317655 ncbi Sphingopyxis alaskensis RB22565
RSOL267608 ncbi Ralstonia solanacearum GMI10006
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111706
RMET266264 ncbi Ralstonia metallidurans CH346
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1346
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP56811 Psychrobacter sp.6
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PSP296591 ncbi Polaromonas sp. JS6666
PSP117 Pirellula sp.5
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PPRO298386 ncbi Photobacterium profundum SS96
PNAP365044 ncbi Polaromonas naphthalenivorans CJ26
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PING357804 ncbi Psychromonas ingrahamii 376
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PCRY335284 ncbi Psychrobacter cryohalolentis K56
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PARC259536 ncbi Psychrobacter arcticus 273-46
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
NSP35761 Nocardioides sp.5
NSP103690 ncbi Nostoc sp. PCC 71205
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534426
NMEN272831 ncbi Neisseria meningitidis FAM186
NMEN122587 ncbi Neisseria meningitidis Z24916
NMEN122586 ncbi Neisseria meningitidis MC586
NGON242231 ncbi Neisseria gonorrhoeae FA 10906
NEUT335283 ncbi Nitrosomonas eutropha C916
NEUR228410 ncbi Nitrosomonas europaea ATCC 197186
MXAN246197 ncbi Myxococcus xanthus DK 16226
MSP400668 ncbi Marinomonas sp. MWYL15
MPET420662 ncbi Methylibium petroleiphilum PM16
MMAR394221 ncbi Maricaulis maris MCS105
MFLA265072 ncbi Methylobacillus flagellatus KT6
MCAP243233 ncbi Methylococcus capsulatus Bath6
MAQU351348 ncbi Marinobacter aquaeolei VT86
LPNE400673 ncbi Legionella pneumophila Corby6
LPNE297246 ncbi Legionella pneumophila Paris6
LPNE297245 ncbi Legionella pneumophila Lens6
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 16
LCHO395495 ncbi Leptothrix cholodnii SP-66
KRAD266940 ncbi Kineococcus radiotolerans SRS302165
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille6
ILOI283942 ncbi Idiomarina loihiensis L2TR6
HNEP81032 Hyphomonas neptunium5
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF374930 ncbi Haemophilus influenzae PittEE5
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HHAL349124 ncbi Halorhodospira halophila SL16
HCHE349521 ncbi Hahella chejuensis KCTC 23966
HARS204773 ncbi Herminiimonas arsenicoxydans6
FTUL418136 ncbi Francisella tularensis tularensis WY96-34185
FTUL401614 ncbi Francisella novicida U1125
FTUL393115 ncbi Francisella tularensis tularensis FSC1985
FRANT ncbi Francisella tularensis tularensis SCHU S45
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250175
ESP42895 Enterobacter sp.6
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DNOD246195 ncbi Dichelobacter nodosus VCS1703A5
DARO159087 ncbi Dechloromonas aromatica RCB6
CVIO243365 ncbi Chromobacterium violaceum ATCC 124726
CSAL290398 ncbi Chromohalobacter salexigens DSM 30436
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CJAP155077 Cellvibrio japonicus6
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1115
CBUR360115 ncbi Coxiella burnetii RSA 3315
CBUR227377 ncbi Coxiella burnetii RSA 4935
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTHA271848 ncbi Burkholderia thailandensis E2645
BSP36773 Burkholderia sp.5
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233445
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BBRO257310 ncbi Bordetella bronchiseptica RB506
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
AVAR240292 ncbi Anabaena variabilis ATCC 294135
ASP76114 ncbi Aromatoleum aromaticum EbN16
ASP62977 ncbi Acinetobacter sp. ADP16
ASP62928 ncbi Azoarcus sp. BH726
ASP232721 ncbi Acidovorax sp. JS426
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
AMAR329726 ncbi Acaryochloris marina MBIC110175
AHYD196024 Aeromonas hydrophila dhakensis6
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232706
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-16
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ABOR393595 ncbi Alcanivorax borkumensis SK26
ABAU360910 ncbi Bordetella avium 197N5
AAVE397945 ncbi Acidovorax citrulli AAC00-16


Names of the homologs of the genes in the group in each of these orgs
  G7530   G7527   G7526   G7525   G7524   EG10419   
YPSE349747 YPSIP31758_0826YPSIP31758_0830YPSIP31758_0831YPSIP31758_0834YPSIP31758_0835YPSIP31758_0836
YPSE273123 YPTB3217YPTB3213YPTB3212YPTB3209YPTB3208YPTB3207
YPES386656 YPDSF_0570YPDSF_0574YPDSF_0575YPDSF_0578YPDSF_0579YPDSF_0580
YPES377628 YPN_3142YPN_3138YPN_3137YPN_3134YPN_3133YPN_3132
YPES360102 YPA_0320YPA_0324YPA_0325YPA_0328YPA_0329YPA_0330
YPES349746 YPANGOLA_A0142YPANGOLA_A0138YPANGOLA_A3337YPANGOLA_A3340YPANGOLA_A3341YPANGOLA_A3342
YPES214092 YPO0945YPO0941YPO0940YPO0937YPO0936YPO0935
YPES187410 Y3331Y3327Y3326Y3323Y3322Y3321
YENT393305 YE3437YE3433YE3432YE3429YE3428YE3427
XORY360094 XOOORF_4207XOOORF_3894XOOORF_3893XOOORF_3885XOOORF_3886XOOORF_3263
XORY342109 XOO1038XOO1301XOO1302XOO1310XOO1309XOO1646
XORY291331 XOO1141XOO1417XOO1418XOO1426XOO1425XOO1745
XFAS405440 XFASM12_0846XFASM12_1237XFASM12_1253XFASM12_1427XFASM12_1428XFASM12_1016
XFAS183190 PD_0723PD_1080PD_1147PD_1275PD_1276PD_0844
XFAS160492 XF1506XF1717XF1633XF2227XF2228XF1956
XCAM487884 XCC-B100_0931XCC-B100_1405XCC-B100_1406XCC-B100_1414XCC-B100_1413XCC-B100_1228
XCAM316273 XCAORF_3594XCAORF_3121XCAORF_3120XCAORF_3112XCAORF_3113XCAORF_3293
XCAM314565 XC_0962XC_1357XC_1358XC_1366XC_1365XC_1182
XCAM190485 XCC3253XCC2756XCC2755XCC2747XCC2748XCC2926
XAXO190486 XAC3399XAC2925XAC2924XAC2917XAC2918XAC3103
VVUL216895 VV1_1520VV1_1525VV1_1526VV1_1528VV1_1529VV1_1530
VVUL196600 VV2879VV2873VV2874VV2870VV2869VV2868
VPAR223926 VP2621VP2616VP2615VP2613VP2612VP2611
VFIS312309 VF0425VF0430VF0431VF0433VF0434VF0435
VEIS391735 VEIS_4156VEIS_1687VEIS_1688VEIS_1516VEIS_1517VEIS_0926
VCHO345073 VC0395_A0008VC0395_A0013VC0395_A0014VC0395_A0018VC0395_A0019VC0395_A0020
VCHO VC0456VC0461VC0462VC0466VC0467VC0468
TTUR377629 TERTU_0216TERTU_0223TERTU_0225TERTU_0227TERTU_0228TERTU_0230
TDEN292415 TBD_0478TBD_0668TBD_2419TBD_2580TBD_2579TBD_2409
TCRU317025 TCR_2054TCR_1834TCR_1750TCR_1828TCR_1827TCR_1825
STYP99287 STM3103STM3100STM3099STM3097STM3096STM3095
SSP94122 SHEWANA3_1189SHEWANA3_1194SHEWANA3_1195SHEWANA3_1199SHEWANA3_1200SHEWANA3_3445
SSP1148 SLR0402SLR0556SLR0161SLL1547SLR1238
SSON300269 SSO_3108SSO_3104SSO_3105SSO_3103SSO_3102SSO_3101
SSED425104 SSED_1227SSED_1232SSED_1233SSED_1236SSED_1237SSED_3973
SPRO399741 SPRO_4034SPRO_4030SPRO_4029SPRO_4028SPRO_4027SPRO_4026
SPEA398579 SPEA_1122SPEA_1127SPEA_1128SPEA_1131SPEA_1132SPEA_0599
SONE211586 SO_3358SO_3352SO_3351SO_3347SO_3346SO_0831
SLOI323850 SHEW_1132SHEW_1137SHEW_1138SHEW_1143SHEW_1144SHEW_3225
SHIGELLA YGGVYGGSYGGRYQGFYQGEGSHB
SHAL458817 SHAL_1167SHAL_1172SHAL_1173SHAL_1176SHAL_1177SHAL_0700
SGLO343509 SG2031SG2027SG2024SG2023SG2022
SFLE373384 SFV_3008SFV_3005SFV_3004SFV_3003SFV_3002SFV_3001
SFLE198214 AAN44426.1AAN44423.1AAN44422.1AAN44421.1AAN44420.1AAN44419.1
SENT454169 SEHA_C3342SEHA_C3339SEHA_C3338SEHA_C3336SEHA_C3335SEHA_C3334
SENT321314 SCH_3043SCH_3040SCH_3039SCH_3037SCH_3036SCH_3035
SENT295319 SPA2966SPA2963SPA2962SPA2960SPA2959SPA2958
SENT220341 STY3256STY3253STY3252STY3250STY3249STY3248
SENT209261 T3015T3012T3011T3009T3008T3007
SDYS300267 SDY_3118SDY_3122SDY_3121SDY_3123SDY_3124SDY_3125
SDEN318161 SDEN_2686SDEN_2682SDEN_2681SDEN_2673SDEN_2674SDEN_2975
SDEG203122 SDE_3647SDE_3641SDE_3640SDE_3638SDE_3637SDE_3635
SBOY300268 SBO_3036SBO_3040SBO_3039SBO_3041SBO_3042SBO_3043
SBAL402882 SHEW185_3045SHEW185_3040SHEW185_3039SHEW185_3035SHEW185_3034SHEW185_0808
SBAL399599 SBAL195_3188SBAL195_3183SBAL195_3182SBAL195_3178SBAL195_3177SBAL195_0840
SALA317655 SALA_0257SALA_3024SALA_0925SALA_0165SALA_0261
RSOL267608 RSC2160RSC2683RSC2682RSC0676RSC0675RSC0345
RRUB269796 RRU_A3640RRU_A1141RRU_A0118RRU_A3178RRU_A3059RRU_A3690
RMET266264 RMET_0851RMET_2937RMET_2936RMET_2742RMET_2743RMET_0243
RFER338969 RFER_1630RFER_3879RFER_3878RFER_1378RFER_1377RFER_0765
REUT381666 H16_A0948H16_A3105H16_A3104H16_A2915H16_A2916H16_A0323
REUT264198 REUT_A2478REUT_A2801REUT_A2800REUT_A0706REUT_A0705REUT_A0294
PSYR223283 PSPTO_5051PSPTO_5046PSPTO_5045PSPTO_5038PSPTO_5037PSPTO_5035
PSYR205918 PSYR_0472PSYR_0477PSYR_0478PSYR_0484PSYR_0485PSYR_0487
PSTU379731 PST_3973PST_3966PST_3965PST_3957PST_3956PST_3954
PSP56811 PSYCPRWF_0308PSYCPRWF_1883PSYCPRWF_1884PSYCPRWF_0143PSYCPRWF_0144PSYCPRWF_0522
PSP312153 PNUC_1081PNUC_1784PNUC_0244PNUC_0243PNUC_1954
PSP296591 BPRO_1340BPRO_0397BPRO_0396BPRO_1143BPRO_1142BPRO_4540
PSP117 RB5134RB12773RB8076RB5675RB6756
PPUT76869 PPUTGB1_5150PPUTGB1_5144PPUTGB1_5143PPUTGB1_5046PPUTGB1_5045PPUTGB1_5043
PPUT351746 PPUT_4973PPUT_4967PPUT_4966PPUT_4870PPUT_4869PPUT_4867
PPUT160488 PP_5100PP_5094PP_5093PP_4996PP_4995PP_4993
PPRO298386 PBPRA3148PBPRA3143PBPRA3142PBPRA3140PBPRA3139PBPRA3138
PNAP365044 PNAP_0815PNAP_0280PNAP_0278PNAP_3347PNAP_3348PNAP_3736
PMEN399739 PMEN_4158PMEN_4150PMEN_4149PMEN_0399PMEN_0400PMEN_0402
PLUM243265 PLU1177PLU1180PLU1181PLU1182PLU1183PLU1184
PING357804 PING_3045PING_3040PING_3039PING_1285PING_1286PING_1287
PHAL326442 PSHAA2608PSHAA2604PSHAA2603PSHAA2601PSHAA2600PSHAA2599
PFLU220664 PFL_5845PFL_5838PFL_5837PFL_5831PFL_5830PFL_5828
PFLU216595 PFLU5769PFLU5763PFLU5762PFLU5756PFLU5755PFLU5753
PFLU205922 PFL_5326PFL_5319PFL_5318PFL_5312PFL_5311PFL_5309
PENT384676 PSEEN0312PSEEN0318PSEEN0319PSEEN5059PSEEN5058PSEEN5056
PCRY335284 PCRYO_2232PCRYO_0294PCRYO_0293PCRYO_0061PCRYO_0062PCRYO_2033
PATL342610 PATL_3287PATL_3718PATL_3717PATL_1154PATL_1153PATL_1152
PARC259536 PSYC_1939PSYC_0268PSYC_0267PSYC_0056PSYC_0057PSYC_1752
PAER208964 PA0387PA0394PA0395PA0404PA0405PA0407
PAER208963 PA14_05050PA14_05160PA14_05180PA14_05280PA14_05290PA14_05310
NSP35761 NOCA_1324NOCA_3058NOCA_1126NOCA_2408NOCA_1289
NSP103690 ALL5088ALR0486ALL2443ALR3100ALL3859
NOCE323261 NOC_2443NOC_3003NOC_3004NOC_0367NOC_0368
NMUL323848 NMUL_A0067NMUL_A2732NMUL_A2479NMUL_A2478NMUL_A0217
NMEN374833 NMCC_0587NMCC_0053NMCC_0052NMCC_1250NMCC_1249NMCC_1461
NMEN272831 NMC0582NMC0037NMC0036NMC1275NMC1274NMC1477
NMEN122587 NMA0849NMA0217NMA0218NMA1551NMA1550NMA1747
NMEN122586 NMB_0639NMB_0053NMB_0052NMB_1337NMB_1336NMB_1559
NGON242231 NGO0221NGO1907NGO1908NGO0568NGO0569NGO1217
NEUT335283 NEUT_0309NEUT_2339NEUT_2338NEUT_0449NEUT_0448NEUT_0953
NEUR228410 NE0277NE0966NE0965NE1667NE1668NE1295
MXAN246197 MXAN_2005MXAN_2641MXAN_5787MXAN_5823MXAN_2022MXAN_0017
MSP400668 MMWYL1_4334MMWYL1_0545MMWYL1_0540MMWYL1_0539MMWYL1_4323
MPET420662 MPE_A2704MPE_A3759MPE_A3760MPE_A0706MPE_A0705MPE_A0180
MMAR394221 MMAR10_3010MMAR10_2952MMAR10_1708MMAR10_2223MMAR10_3016
MFLA265072 MFLA_0042MFLA_2108MFLA_2107MFLA_2100MFLA_2099MFLA_2517
MCAP243233 MCA_3023MCA_1536MCA_1537MCA_2335MCA_2336MCA_2338
MAQU351348 MAQU_0529MAQU_0536MAQU_0537MAQU_3763MAQU_3764MAQU_3766
LPNE400673 LPC_1994LPC_1498LPC_1497LPC_2716LPC_2717LPC_1291
LPNE297246 LPP2548LPP1996LPP1995LPP0637LPP0636LPP1810
LPNE297245 LPL2404LPL1991LPL1990LPL0621LPL0620LPL1811
LPNE272624 LPG2484LPG2014LPG2013LPG0587LPG0586LPG1846
LCHO395495 LCHO_0704LCHO_1630LCHO_1631LCHO_3961LCHO_3962LCHO_3909
KRAD266940 KRAD_3762KRAD_3194KRAD_3027KRAD_3031KRAD_3774
KPNE272620 GKPORF_B2733GKPORF_B2730GKPORF_B2729GKPORF_B2727GKPORF_B2726GKPORF_B2725
JSP375286 MMA_1333MMA_0341MMA_0340MMA_2949MMA_2950MMA_0172
ILOI283942 IL1979IL1974IL1973IL2219IL2218IL2217
HNEP81032 HNE_3310HNE_3552HNE_2300HNE_1049HNE_0301
HINF71421 HI_0260HI_0090HI_0305HI_0304HI_1531
HINF374930 CGSHIEE_01765CGSHIEE_02835CGSHIEE_01525CGSHIEE_01530CGSHIEE_05235
HINF281310 NTHI0366NTHI0168NTHI0416NTHI0415NTHI1602
HHAL349124 HHAL_0972HHAL_0945HHAL_0316HHAL_0939HHAL_0938HHAL_0935
HCHE349521 HCH_06362HCH_06353HCH_06352HCH_00551HCH_00550HCH_00547
HARS204773 HEAR2125HEAR0290HEAR0289HEAR2739HEAR2740HEAR0146
FTUL418136 FTW_0367FTW_0165FTW_0892FTW_0891FTW_0819
FTUL401614 FTN_1468FTN_1622FTN_0867FTN_0866FTN_0804
FTUL393115 FTF1560FTF0088FTF0986FTF0985FTF0926
FRANT FT.1562PILTFT.0987FT.0986GSHB
FPHI484022 FPHI_1207FPHI_0996FPHI_1753FPHI_1754FPHI_1813
ESP42895 ENT638_3360ENT638_3357ENT638_3356ENT638_3353ENT638_3352ENT638_3351
EFER585054 EFER_2893EFER_2890EFER_2889EFER_2888EFER_2887EFER_2886
ECOO157 YGGVYGGSYGGRYQGFYQGEGSHB
ECOL83334 ECS3830ECS3826ECS3827ECS3825ECS3824ECS3823
ECOL585397 ECED1_3417ECED1_3414ECED1_3413ECED1_3412ECED1_3411ECED1_3410
ECOL585057 ECIAI39_3372ECIAI39_3369ECIAI39_3368ECIAI39_3367ECIAI39_3366ECIAI39_3365
ECOL585056 ECUMN_3306ECUMN_3303ECUMN_3302ECUMN_3301ECUMN_3300ECUMN_3299
ECOL585055 EC55989_3247EC55989_3244EC55989_3243EC55989_3242EC55989_3241EC55989_3240
ECOL585035 ECS88_3236ECS88_3233ECS88_3232ECS88_3231ECS88_3230ECS88_3229
ECOL585034 ECIAI1_3087ECIAI1_3084ECIAI1_3083ECIAI1_3082ECIAI1_3081ECIAI1_3080
ECOL481805 ECOLC_0760ECOLC_0763ECOLC_0764ECOLC_0765ECOLC_0766ECOLC_0767
ECOL469008 ECBD_0786ECBD_0789ECBD_0790ECBD_0791ECBD_0792ECBD_0793
ECOL439855 ECSMS35_3096ECSMS35_3093ECSMS35_3092ECSMS35_3091ECSMS35_3090ECSMS35_3089
ECOL413997 ECB_02784ECB_02781ECB_02780ECB_02779ECB_02778ECB_02777
ECOL409438 ECSE_3222ECSE_3219ECSE_3218ECSE_3217ECSE_3216ECSE_3215
ECOL405955 APECO1_3567APECO1_3570APECO1_3571APECO1_3572APECO1_3573APECO1_3574
ECOL364106 UTI89_C3343UTI89_C3340UTI89_C3339UTI89_C3338UTI89_C3337UTI89_C3336
ECOL362663 ECP_2948ECP_2945ECP_2944ECP_2943ECP_2942ECP_2941
ECOL331111 ECE24377A_3298ECE24377A_3295ECE24377A_3294ECE24377A_3292ECE24377A_3291ECE24377A_3290
ECOL316407 ECK2949:JW2921:B2954ECK2946:JW2918:B2951ECK2945:JW2917:B2950ECK2944:JW2916:B2949ECK2943:JW2915:B2948ECK2942:JW2914:B2947
ECOL199310 C3540C3537C3536C3535C3534C3533
ECAR218491 ECA3631ECA3627ECA3626ECA3926ECA3925ECA3924
DNOD246195 DNO_0663DNO_0204DNO_0675DNO_1098DNO_1218
DARO159087 DARO_3852DARO_3884DARO_3883DARO_3892DARO_3893DARO_0010
CVIO243365 CV_0926CV_0178CV_0179CV_3910CV_3909CV_4275
CSAL290398 CSAL_3307CSAL_3054CSAL_3053CSAL_0059CSAL_0058CSAL_0057
CPSY167879 CPS_3667CPS_3663CPS_3662CPS_1251CPS_1252CPS_1253
CJAP155077 CJA_0122CJA_0088CJA_0087CJA_0084CJA_0083CJA_0081
CBUR434922 COXBU7E912_2059COXBU7E912_2190COXBU7E912_2194COXBU7E912_2193COXBU7E912_0106
CBUR360115 COXBURSA331_A0152COXBURSA331_A2216COXBURSA331_A2220COXBURSA331_A2219COXBURSA331_A2078
CBUR227377 CBU_0043CBU_2091CBU_2094CBU_2093CBU_1875
BVIE269482 BCEP1808_0913BCEP1808_0692BCEP1808_0799BCEP1808_0798BCEP1808_2963
BTHA271848 BTH_I1583BTH_I1288BTH_I1463BTH_I1462BTH_I0410
BSP36773 BCEP18194_A4104BCEP18194_A3817BCEP18194_A3963BCEP18194_A3962BCEP18194_A6192
BPSE320373 BURPS668_2952BURPS668_3299BURPS668_3111BURPS668_3112BURPS668_0471
BPSE320372 BURPS1710B_A3309BURPS1710B_A3620BURPS1710B_A3433BURPS1710B_A3434BURPS1710B_A0696
BPSE272560 BPSL2566BPSL2846BPSL2692BPSL2693BPSL0437
BPET94624 BPET2272BPET2896BPET0562BPET0561BPET2832
BPER257313 BP1593BP1320BP0320BP0319BP1499
BPAR257311 BPP2990BPP2901BPP3931BPP3932BPP1965
BMAL320389 BMA10247_1967BMA10247_2598BMA10247_1858BMA10247_1859BMA10247_2831
BMAL320388 BMASAVP1_A0812BMASAVP1_A0328BMASAVP1_A0917BMASAVP1_A0916BMASAVP1_A0188
BMAL243160 BMA_2099BMA_2411BMA_1996BMA_1997BMA_3214
BCEN331272 BCEN2424_0996BCEN2424_0731BCEN2424_0865BCEN2424_0864BCEN2424_2863
BCEN331271 BCEN_0517BCEN_0247BCEN_0383BCEN_0382BCEN_2249
BBRO257310 BB2956BB2871BB0791BB4404BB4405BB2152
BAMB398577 BAMMC406_0868BAMMC406_0647BAMMC406_0755BAMMC406_0754BAMMC406_2780
BAMB339670 BAMB_0856BAMB_0621BAMB_0738BAMB_0737BAMB_2918
AVAR240292 AVA_2368AVA_2899AVA_0375AVA_3804AVA_1836
ASP76114 C1A234EBA1768EBA1770EBA1756EBA1753EBA2546
ASP62977 ACIAD0526ACIAD0913ACIAD0912ACIAD0352ACIAD0353ACIAD3518
ASP62928 AZO3964AZO3467AZO3468AZO3460AZO3459AZO3755
ASP232721 AJS_0922AJS_0421AJS_0420AJS_3572AJS_3573AJS_3907
ASAL382245 ASA_3446ASA_3631ASA_3632ASA_1194ASA_1195ASA_1197
AMAR329726 AM1_4672AM1_5365AM1_0418AM1_0036AM1_5576
AHYD196024 AHA_0846AHA_3664AHA_3665AHA_3131AHA_3130AHA_3128
AFER243159 AFE_0759AFE_2765AFE_2764AFE_0049AFE_0048AFE_0047
AEHR187272 MLG_2447MLG_0341MLG_0342MLG_0348MLG_0349MLG_0354
ADEH290397 ADEH_3360ADEH_2503ADEH_0623ADEH_1232ADEH_3962
ABOR393595 ABO_2578ABO_2669ABO_2670ABO_0113ABO_0112ABO_0110
ABAU360910 BAV1933BAV1600BAV3011BAV3012BAV1395
AAVE397945 AAVE_3578AAVE_0638AAVE_0637AAVE_0908AAVE_0907AAVE_4539


Organism features enriched in list (features available for 177 out of the 188 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 3.367e-7992
Arrangment:Singles 0.006526699286
Disease:Bubonic_plague 0.000737666
Disease:Dysentery 0.000737666
Disease:Gastroenteritis 0.00056341013
Disease:Legionnaire's_disease 0.008296244
Disease:Meningitis_and_septicemia 0.008296244
Endospores:No 3.999e-934211
Endospores:Yes 5.269e-7253
GC_Content_Range4:0-40 2.203e-2414213
GC_Content_Range4:40-60 2.379e-11104224
GC_Content_Range4:60-100 0.000725459145
GC_Content_Range7:30-40 4.940e-1514166
GC_Content_Range7:40-50 0.009553945117
GC_Content_Range7:50-60 1.823e-959107
GC_Content_Range7:60-70 0.000234757134
Genome_Size_Range5:0-2 1.487e-179155
Genome_Size_Range5:2-4 0.000022839197
Genome_Size_Range5:4-6 1.416e-18102184
Genome_Size_Range5:6-10 0.00003822747
Genome_Size_Range9:1-2 1.028e-129128
Genome_Size_Range9:2-3 0.000173121120
Genome_Size_Range9:4-5 1.888e-75196
Genome_Size_Range9:5-6 3.282e-95188
Genome_Size_Range9:6-8 0.00001232438
Gram_Stain:Gram_Neg 6.827e-29159333
Gram_Stain:Gram_Pos 6.551e-271150
Habitat:Multiple 0.008010865178
Habitat:Specialized 0.0015529753
Motility:No 4.099e-919151
Motility:Yes 1.329e-11118267
Optimal_temp.:- 0.001841793257
Optimal_temp.:35-37 0.00056341013
Optimal_temp.:37 0.005176322106
Oxygen_Req:Aerobic 0.002258470185
Oxygen_Req:Anaerobic 3.390e-143102
Oxygen_Req:Facultative 1.334e-686201
Pathogenic_in:No 0.000091049226
Pathogenic_in:Plant 0.00055801115
Shape:Coccus 0.00008471182
Shape:Rod 4.445e-11140347
Shape:Spiral 0.0018234334
Temp._range:Mesophilic 0.0013328156473
Temp._range:Psychrophilic 0.000410089
Temp._range:Thermophilic 0.0000330135



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 140
Effective number of orgs (counting one per cluster within 468 clusters): 113

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSOL273057 ncbi Sulfolobus solfataricus P21
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SMAR399550 ncbi Staphylothermus marinus F11
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332091
RFEL315456 ncbi Rickettsia felis URRWXCal21
RCON272944 ncbi Rickettsia conorii Malish 71
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PRUM264731 ncbi Prevotella ruminicola 230
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13751
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PAER178306 ncbi Pyrobaculum aerophilum IM21
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong1
NSP387092 ncbi Nitratiruptor sp. SB155-21
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP1
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MART243272 ncbi Mycoplasma arthritidis 158L3-11
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514491
HBUT415426 ncbi Hyperthermus butylicus DSM 54561
HACI382638 ncbi Helicobacter acinonychis Sheeba0
ECAN269484 ncbi Ehrlichia canis Jake1
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3811
CFET360106 ncbi Campylobacter fetus fetus 82-401
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CCUR360105 ncbi Campylobacter curvus 525.921
CCON360104 ncbi Campylobacter concisus 138261
CCAV227941 ncbi Chlamydophila caviae GPIC1
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B310
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ABUT367737 ncbi Arcobacter butzleri RM40181
AAUR290340 ncbi Arthrobacter aurescens TC11


Names of the homologs of the genes in the group in each of these orgs
  G7530   G7527   G7526   G7525   G7524   EG10419   
WPIP955 WD_0322
WPIP80849 WB_0846
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TPEN368408
TPAL243276
TKOD69014
TACI273075
STOK273063
SSP387093 SUN_0485
SSOL273057 SSO0645
SSAP342451 SSP1644
SMAR399550 SMAR_0746
SAUR93062 SACOL1162
SAUR93061 SAOUHSC_01107
SAUR426430 NWMN_1064
SAUR418127 SAHV_1142
SAUR367830 SAUSA300_1050
SAUR359787 SAURJH1_1232
SAUR359786 SAURJH9_1210
SAUR282459 SAS1085
SAUR282458 SAR1124
SAUR273036 SAB1015
SAUR196620 MW1034
SAUR158879 SA0998
SAUR158878 SAV1152
SACI330779
RSAL288705 RSAL33209_1474
RFEL315456 RF_0044
RCON272944 RC0043
RAKA293614 A1C_00165
PTOR263820
PRUM264731
PMOB403833 PMOB_1356
PMAR93060 P9215_01961
PMAR167542 P9515ORF_0213
PMAR167540 PMM0178
PMAR167539 PRO_0203
PISL384616 PISL_0721
PINT246198 PIN_A1352
PHOR70601
PGIN242619 PG_2126
PFUR186497
PAST100379
PARS340102 PARS_2302
PAER178306 PAE0645
PABY272844
OTSU357244 OTBS_0498
NSP387092 NIS_1175
NSEN222891 NSE_0186
NPHA348780
MTHE349307 MTHE_1118
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635 MYPU_5560
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLAB410358
MKAN190192
MJAN243232 MJ_0620
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564 MBUR_1276
MBAR269797 MBAR_A3203
MART243272 MART0168
MAEO419665
MACE188937 MA1361
LBIF456481 LEPBI_I3376
LBIF355278 LBF_3262
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HHEP235279 HH_1682
HBUT415426 HBUT_0019
HACI382638
ECAN269484 ECAJ_0670
CTRA471473 CTLON_0458
CTRA471472 CTL0463
CSUL444179
CPNE182082 CPB0140
CPNE138677 CPJ0139
CPNE115713 CPN0139
CPNE115711 CP_0633
CMUR243161 TC_0483
CMET456442
CMAQ397948 CMAQ_0151
CKOR374847
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CHOM360107 CHAB381_1643
CFET360106 CFF8240_1145
CFEL264202 CF0373
CCUR360105 CCV52592_0998
CCON360104 CCC13826_0222
CCAV227941 CCA_00630
CABO218497 CAB604
BXEN266265
BTUR314724
BLON206672 BL0285
BHER314723
BGAR290434
BBUR224326
BAPH372461 BCC_360
BAFZ390236
AYEL322098
AURANTIMONAS
APHA212042 APH_0193
APER272557
ALAI441768
AFUL224325
ABUT367737 ABU_0870
AAUR290340 AAUR_2569


Organism features enriched in list (features available for 131 out of the 140 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00273461192
Arrangment:Clusters 0.00002111217
Disease:Pharyngitis 5.484e-688
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.0000400911
Disease:bronchitis_and_pneumonitis 5.484e-688
Endospores:No 1.428e-1688211
GC_Content_Range4:0-40 1.825e-1079213
GC_Content_Range4:60-100 1.450e-810145
GC_Content_Range7:0-30 0.00002032347
GC_Content_Range7:30-40 0.000027656166
GC_Content_Range7:50-60 0.000590012107
GC_Content_Range7:60-70 2.125e-710134
Genome_Size_Range5:0-2 6.702e-2583155
Genome_Size_Range5:4-6 1.593e-194184
Genome_Size_Range5:6-10 0.0000546147
Genome_Size_Range9:0-1 3.420e-112227
Genome_Size_Range9:1-2 2.354e-1361128
Genome_Size_Range9:3-4 0.0020845877
Genome_Size_Range9:4-5 1.108e-9296
Genome_Size_Range9:5-6 1.063e-8288
Gram_Stain:Gram_Neg 0.000547159333
Gram_Stain:Gram_Pos 0.000099618150
Habitat:Host-associated 0.000010667206
Habitat:Multiple 6.457e-1112178
Habitat:Specialized 0.00020222353
Motility:No 0.004217745151
Optimal_temp.:- 0.007913047257
Optimal_temp.:30-37 0.00031921118
Optimal_temp.:37 0.006872033106
Optimal_temp.:85 0.002459344
Oxygen_Req:Aerobic 0.000574127185
Oxygen_Req:Anaerobic 0.000193137102
Oxygen_Req:Facultative 0.003140233201
Oxygen_Req:Microaerophilic 0.00031921118
Salinity:Extreme_halophilic 0.006924357
Shape:Irregular_coccus 1.622e-71417
Shape:Pleomorphic 0.002019668
Shape:Rod 6.480e-1934347
Shape:Sphere 9.811e-91619
Shape:Spiral 4.996e-82234
Temp._range:Hyperthermophilic 1.056e-71723
Temp._range:Mesophilic 0.000093391473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181560.6614
AST-PWY (arginine degradation II (AST pathway))1201080.6366
GLYCOCAT-PWY (glycogen degradation I)2461630.6350
PWY-4041 (γ-glutamyl cycle)2791730.6245
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001780.6122
PWY-5918 (heme biosynthesis I)2721650.5846
PWY-1269 (CMP-KDO biosynthesis I)3251810.5805
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391840.5736
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951340.5667
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861670.5663
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481840.5562
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911670.5550
PWY-5386 (methylglyoxal degradation I)3051710.5523
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961680.5509
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901660.5502
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911290.5412
PWY-5913 (TCA cycle variation IV)3011680.5400
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251400.5249
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761200.5195
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81740.5153
TYRFUMCAT-PWY (tyrosine degradation I)1841220.5095
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291710.5024
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491060.5004
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831200.4973
LIPASYN-PWY (phospholipases)2121310.4947
GLUCONSUPER-PWY (D-gluconate degradation)2291370.4924
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911220.4881
PWY-5148 (acyl-CoA hydrolysis)2271350.4832
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491420.4773
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491420.4773
PWY0-1182 (trehalose degradation II (trehalase))70630.4637
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551420.4626
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3981830.4579
PWY-6087 (4-chlorocatechol degradation)2231280.4428
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4221860.4387
PWY0-981 (taurine degradation IV)106790.4375
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3741730.4293
GLUCARDEG-PWY (D-glucarate degradation I)152980.4245
GALACTITOLCAT-PWY (galactitol degradation)73610.4237
PWY-5340 (sulfate activation for sulfonation)3851750.4233
DAPLYSINESYN-PWY (lysine biosynthesis I)3421630.4202
PWY-5084 (2-ketoglutarate dehydrogenase complex)3261580.4174
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96720.4168
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001500.4162
P344-PWY (acrylonitrile degradation)2101190.4115
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3651680.4107
REDCITCYC (TCA cycle variation II)1741050.4091
PWY-3162 (tryptophan degradation V (side chain pathway))94700.4067
KDOSYN-PWY (KDO transfer to lipid IVA I)1801070.4064
PWY-5669 (phosphatidylethanolamine biosynthesis I)4161800.4043
PWY-6193 (3-chlorocatechol degradation II (ortho))1941120.4037
PWY-5188 (tetrapyrrole biosynthesis I)4391850.4026
P601-PWY (D-camphor degradation)95700.4020
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791060.4017
PWY-6134 (tyrosine biosynthesis IV)89670.4012



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  G7527   G7526   G7525   G7524   EG10419   
G75300.9990030.9989660.9988840.9988750.998528
G75270.9997330.9989750.9990220.998903
G75260.9993930.9991670.998567
G75250.9998510.999231
G75240.999394
EG10419



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PAIRWISE BLAST SCORES:

  G7530   G7527   G7526   G7525   G7524   EG10419   
G75300.0f0-----
G7527-0.0f0----
G7526--0.0f0---
G7525---0.0f0--
G7524----0.0f0-
EG10419-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10419 G7524 G7525 G7526 G7527 G7530 (centered at G7526)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7530   G7527   G7526   G7525   G7524   EG10419   
406/623396/623241/623406/623316/623290/623
AAEO224324:0:Tyes052380---
AAUR290340:2:Tyes0-----
AAVE397945:0:Tyes2888102652643835
ABAC204669:0:Tyes219536778400--
ABAU360910:0:Tyes535205-162216230
ABOR393595:0:Tyes251026012602320
ABUT367737:0:Tyes-0----
ACAU438753:0:Tyes-0-25952114124
ACEL351607:0:Tyes6680306-689-
ACRY349163:8:Tyes-1188-0-1159
ADEH290397:0:Tyes2765189606143373-
AEHR187272:0:Tyes2091017813
AFER243159:0:Tyes69926792678210
AHYD196024:0:Tyes027232724223422332231
AMAR234826:0:Tyes---468-0
AMAR329726:9:Tyes458852723750-5482
AMET293826:0:Tyes0180624691468--
ANAE240017:0:Tyes0168-427--
AORE350688:0:Tyes084410731096--
APHA212042:0:Tyes-----0
APLE416269:0:Tyes4200-184185-
APLE434271:0:Tno4270-187188-
ASAL382245:5:Tyes215623392340012
ASP1667:3:Tyes10100----
ASP232721:2:Tyes49310305430553400
ASP62928:0:Tyes5068910296
ASP62977:0:Tyes155528527012939
ASP76114:2:Tyes3438910488
AVAR240292:3:Tyes2003253403442-1470
BABO262698:0:Tno---0--
BABO262698:1:Tno-1241--01546
BAMB339670:3:Tno2390-1181172351
BAMB398577:3:Tno2190-1081072162
BAMY326423:0:Tyes10210-927--
BANT260799:0:Tno6240-529--
BANT261594:2:Tno6460-553--
BANT568206:2:Tyes40700-3975--
BANT592021:2:Tno6550-561--
BAPH198804:0:Tyes-2-1-0
BAPH372461:0:Tyes---0--
BBAC264462:0:Tyes-03131---
BBAC360095:0:Tyes-0-686-1044
BBRO257310:0:Tyes218020950365436551382
BCAN483179:0:Tno---0--
BCAN483179:1:Tno-1311--01637
BCEN331271:2:Tno2720-1351342028
BCEN331272:3:Tyes2650-1341332129
BCER226900:1:Tyes5860-474--
BCER288681:0:Tno5740-469--
BCER315749:1:Tyes6400-540--
BCER405917:1:Tyes6110-503--
BCER572264:1:Tno5810-486--
BCIC186490:0:Tyes---012
BCLA66692:0:Tyes1075758-0--
BFRA272559:1:Tyes-727--0-
BFRA295405:0:Tno-915--0-
BHAL272558:0:Tyes18161285-0--
BHEN283166:0:Tyes-1188-5461910
BJAP224911:0:Fyes-0-450188145
BLIC279010:0:Tyes116--0--
BLON206672:0:Tyes0-----
BMAL243160:1:Tno86373-011104
BMAL320388:1:Tno616138-7167150
BMAL320389:1:Tyes104726-01953
BMEL224914:0:Tno---0--
BMEL224914:1:Tno-0--12431790
BMEL359391:0:Tno---0--
BMEL359391:1:Tno-1201--01495
BOVI236:0:Tyes---0--
BOVI236:1:Tyes-1122--01396
BPAR257311:0:Tno969888-188918900
BPER257313:0:Tyes1147900-101055
BPET94624:0:Tyes17252356-102290
BPSE272560:1:Tyes21422425-227122720
BPSE320372:1:Tno24932800-261426150
BPSE320373:1:Tno23862721-253725380
BPUM315750:0:Tyes10360-927--
BQUI283165:0:Tyes-871-3621170
BSP107806:2:Tyes-2-1-0
BSP36773:2:Tyes2890-1451442418
BSP376:0:Tyes-6-40968450
BSUB:0:Tyes13500-1242--
BSUI204722:0:Tyes---0--
BSUI204722:1:Tyes-1284--01597
BSUI470137:0:Tno-653-0--
BSUI470137:1:Tno----01421
BTHA271848:1:Tno1158868-104210410
BTHE226186:0:Tyes-262--0-
BTHU281309:1:Tno5710-475--
BTHU412694:1:Tno5270-429--
BTRI382640:1:Tyes-1716-7753550
BVIE269482:7:Tyes2200-1071062250
BWEI315730:4:Tyes5900-497--
CABO218497:0:Tyes----0-
CACE272562:1:Tyes995433100--
CAULO:0:Tyes-3658--32990
CBEI290402:0:Tyes01218754744--
CBLO203907:0:Tyes---01-
CBLO291272:0:Tno---01-
CBOT36826:1:Tno1788010721095--
CBOT441770:0:Tyes17670904989--
CBOT441771:0:Tno16250871905--
CBOT441772:1:Tno1798010241048--
CBOT498213:1:Tno178309801073--
CBOT508765:1:Tyes01969729719--
CBOT515621:2:Tyes1916011871210--
CBOT536232:0:Tno1906011081132--
CBUR227377:1:Tyes01968-197119701759
CBUR360115:1:Tno01956-196019591818
CBUR434922:2:Tno18671996-200019990
CCAV227941:1:Tyes----0-
CCHL340177:0:Tyes-0--253-
CCON360104:2:Tyes--0---
CCUR360105:0:Tyes--0---
CDES477974:0:Tyes5474530---
CDIF272563:1:Tyes2047135722490--
CDIP257309:0:Tyes1100--608-
CEFF196164:0:Fyes670--0--
CFEL264202:1:Tyes----0-
CFET360106:0:Tyes--0---
CGLU196627:0:Tyes845--01443-
CHOM360107:1:Tyes--0---
CHUT269798:0:Tyes-873--0-
CHYD246194:0:Tyes01681302215--
CJAP155077:0:Tyes4176320
CJEI306537:0:Tyes0--561--
CKLU431943:1:Tyes22430144134--
CMAQ397948:0:Tyes-----0
CMIC31964:2:Tyes-612-0--
CMIC443906:2:Tyes0578-521--
CMUR243161:1:Tyes----0-
CNOV386415:0:Tyes8780321333--
CPEL335992:0:Tyes-2870--630
CPER195102:1:Tyes53087011--
CPER195103:0:Tno47284011--
CPER289380:3:Tyes46385011--
CPHY357809:0:Tyes01972-1907--
CPNE115711:1:Tyes----0-
CPNE115713:0:Tno----0-
CPNE138677:0:Tno----0-
CPNE182082:0:Tno----0-
CPRO264201:0:Fyes-0--20-
CPSY167879:0:Tyes234223382337012
CRUT413404:0:Tyes171174-0-4
CSAL290398:0:Tyes330530493048210
CSP501479:6:Fyes-----0
CSP501479:7:Fyes----0-
CSP501479:8:Fyes-0-761--
CSP78:2:Tyes04899--43546
CTEP194439:0:Tyes-1707-0573-
CTET212717:0:Tyes1222528580--
CTRA471472:0:Tyes----0-
CTRA471473:0:Tno----0-
CVES412965:0:Tyes163167-0-5
CVIO243365:0:Tyes76201382938284219
DARO159087:0:Tyes387739093908391739180
DDES207559:0:Tyes03141----
DETH243164:0:Tyes11326858410--
DGEO319795:1:Tyes1936-0-162-
DHAF138119:0:Tyes844503033--
DNOD246195:0:Tyes4500462862-981
DOLE96561:0:Tyes08162714-1213-
DPSY177439:2:Tyes021361023-1559-
DRAD243230:3:Tyes0-1752-172-
DRED349161:0:Tyes1979031962--
DSHI398580:5:Tyes-0-104230822827
DSP216389:0:Tyes10116467740--
DSP255470:0:Tno9415787070--
DVUL882:1:Tyes308701205---
ECAN269484:0:Tyes-----0
ECAR218491:0:Tyes510301300299
ECHA205920:0:Tyes---121-0
ECOL199310:0:Tno743210
ECOL316407:0:Tno743210
ECOL331111:6:Tno854210
ECOL362663:0:Tno743210
ECOL364106:1:Tno743210
ECOL405955:2:Tyes743210
ECOL409438:6:Tyes743210
ECOL413997:0:Tno743210
ECOL439855:4:Tno743210
ECOL469008:0:Tno034567
ECOL481805:0:Tno034567
ECOL585034:0:Tno743210
ECOL585035:0:Tno743210
ECOL585055:0:Tno743210
ECOL585056:2:Tno743210
ECOL585057:0:Tno743210
ECOL585397:0:Tno743210
ECOL83334:0:Tno743210
ECOLI:0:Tno743210
ECOO157:0:Tno743210
EFAE226185:3:Tyes0--80--
EFER585054:1:Tyes743210
ELIT314225:0:Tyes6781857-0-675
ERUM254945:0:Tyes---0-108
ERUM302409:0:Tno---0-108
ESP42895:1:Tyes965210
FALN326424:0:Tyes0681----
FJOH376686:0:Tyes-3342--0-
FMAG334413:1:Tyes-8-0--
FNOD381764:0:Tyes-0124---
FNUC190304:0:Tyes-10770---
FPHI484022:1:Tyes220-0782783843
FRANT:0:Tno1377-0839838786
FSP106370:0:Tyes0555----
FSP1855:0:Tyes38923330-0-3648
FSUC59374:0:Tyes-3340---
FTUL351581:0:Tno0--579580635
FTUL393011:0:Tno0--530531585
FTUL393115:0:Tyes1350-0828827776
FTUL401614:0:Tyes659-81263620
FTUL418136:0:Tno163-0624623573
FTUL458234:0:Tno0--542543593
GBET391165:0:Tyes-2231--17670
GFOR411154:0:Tyes-0--7781077
GKAU235909:1:Tyes1554015171443--
GMET269799:1:Tyes98702507---
GOXY290633:5:Tyes0309--175574
GSUL243231:0:Tyes135020990---
GTHE420246:1:Tyes1564015291458--
GURA351605:0:Tyes014151997---
GVIO251221:0:Tyes01732162--3192
HARS204773:0:Tyes1852132131243824390
HAUR316274:2:Tyes0609-2699--
HBUT415426:0:Tyes-----0
HCHE349521:0:Tyes561956115610320
HDUC233412:0:Tyes9170-13071306-
HHAL349124:0:Tyes6656380632631628
HHEP235279:0:Tyes-0----
HINF281310:0:Tyes1770-2232221297
HINF374930:0:Tyes46217-01639
HINF71421:0:Tno1590-2042031407
HMOD498761:0:Tyes6718262830--
HNEP81032:0:Tyes29603200-19707400
HSOM205914:1:Tyes1151213-10-
HSOM228400:0:Tno16780-15691568-
ILOI283942:0:Tyes610248247246
JSP290400:1:Tyes-0-17803522490
JSP375286:0:Tyes1185176175282128220
KPNE272620:2:Tyes854210
KRAD266940:2:Fyes125927677630-
LACI272621:0:Tyes7--0--
LBIF355278:2:Tyes----0-
LBIF456481:2:Tno----0-
LBOR355276:1:Tyes0---2216-
LBOR355277:1:Tno2164---0-
LBRE387344:2:Tyes0--8--
LCAS321967:1:Tyes12--0--
LCHO395495:0:Tyes0928929328332843231
LDEL321956:0:Tyes0--5--
LDEL390333:0:Tyes0--5--
LGAS324831:0:Tyes7--0--
LHEL405566:0:Tyes10--0--
LINN272626:1:Tno0961-335--
LINT189518:1:Tyes0---44-
LINT267671:1:Tno28---0-
LINT363253:3:Tyes175139-0--
LJOH257314:0:Tyes7--0--
LLAC272622:5:Tyes1188--0--
LLAC272623:0:Tyes1138--0--
LMES203120:1:Tyes52--0--
LMON169963:0:Tno0--264--
LMON265669:0:Tyes0--272--
LPLA220668:0:Tyes0--7--
LPNE272624:0:Tno189514261425101258
LPNE297245:1:Fno177813631362101175
LPNE297246:1:Fyes190613551354101163
LPNE400673:0:Tno689204203139513960
LREU557436:0:Tyes7686-0--
LSAK314315:0:Tyes17--0--
LSPH444177:1:Tyes24650-2296--
LWEL386043:0:Tyes0--321--
LXYL281090:0:Tyes248391-0--
MABS561007:1:Tyes0531-13723452-
MACE188937:0:Tyes-----0
MAER449447:0:Tyes41252250--318
MAQU351348:2:Tyes078320232033205
MART243272:0:Tyes---0--
MAVI243243:0:Tyes14812252--0-
MBAR269797:1:Tyes-----0
MBOV233413:0:Tno13502150--0-
MBOV410289:0:Tno13422105--0-
MBUR259564:0:Tyes-----0
MCAP243233:0:Tyes142001760761763
MEXT419610:0:Tyes-655-239716730
MFLA265072:0:Tyes020622061205420532469
MGIL350054:3:Tyes1524---0-
MJAN243232:2:Tyes-----0
MLEP272631:0:Tyes727566--0-
MLOT266835:2:Tyes-2628-054143133
MMAG342108:0:Tyes44770--8624484
MMAR394221:0:Tyes12911233-05151297
MMAZ192952:0:Tyes-0---688
MPET420662:1:Tyes2518357235735265250
MPUL272635:0:Tyes---0--
MSME246196:0:Tyes28420--4838-
MSP164756:1:Tno0---1564-
MSP164757:0:Tno0---1948-
MSP189918:2:Tyes0---1579-
MSP266779:3:Tyes-2471-62002850
MSP400668:0:Tyes38646-103853
MSP409:2:Tyes-280-308049610
MSUC221988:0:Tyes15441497-10-
MTBCDC:0:Tno13992247--0-
MTBRV:0:Tno13192127--0-
MTHE264732:0:Tyes032510121092--
MTHE349307:0:Tyes-----0
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