CANDIDATE ID: 438

CANDIDATE ID: 438

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9954700e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG11406 (ribC) (b1662)
   Products of gene:
     - RIBOFLAVIN-SYN-MONOMER (RibC)
     - CPLX0-3952 (riboflavin synthase)
       Reactions:
        2 6,7-dimethyl-8-(1-D-ribityl)lumazine + H+  ->  5-amino-6-(D-ribitylamino)uracil + riboflavin
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))
         PWY-6167 (PWY-6167)
         PWY-6168 (PWY-6168)

- EG11322 (ribE) (b0415)
   Products of gene:
     - LUMAZINESYN-MONOMER (RibE)
     - LUMAZINESYN-CPLX (6,7-dimethyl-8-ribityllumazine synthase)
       Reactions:
        5-amino-6-(D-ribitylamino)uracil + 1-deoxy-L-glycero-tetrulose 4-phosphate  ->  6,7-dimethyl-8-(1-D-ribityl)lumazine + phosphate + 2 H2O + H+
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))
         PWY-6167 (PWY-6167)
         PWY-6168 (PWY-6168)

- EG11321 (ribD) (b0414)
   Products of gene:
     - RIBOFLAVINSYNDEAM-MONOMER (fused diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase)
     - CPLX0-7659 (fused diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase)
       Reactions:
        2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one + H2O  ->  5-amino-6-(5'-phosphoribosylamino)uracil + ammonia
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))
        5-amino-6-(5'-phosphoribosylamino)uracil + NADPH + H+  ->  5-amino-6-(5-phospho-D-ribosylamino)uracil + NADP+
         In pathways
         RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants))

- EG11320 (nrdR) (b0413)
   Products of gene:
     - EG11320-MONOMER (NrdR)
     - CPLX0-8061 (NrdR-Zn2+ transcriptional repressor)
       Regulatees:
        TU0-1022 (nrdHIEF)
        TU00047 (nrdAB)
        TU0-4783 (nrdDG)

- EG10666 (nusB) (b0416)
   Products of gene:
     - EG10666-MONOMER (transcription antitermination protein NusB)
     - CPLX0-7879 (NusB-NusE complex)

- EG10408 (glyA) (b2551)
   Products of gene:
     - GLYOHMETRANS-MONOMER (GlyA)
     - GLYOHMETRANS-CPLX (serine hydroxymethyltransferase)
       Reactions:
        D-alanine + pyridoxal 5'-phosphate  =  pyruvate + pyridoxamine 5'-phosphate
        allothreonine  =  acetaldehyde + glycine
        L-serine + tetrahydrofolate + 2 H+  =  glycine + 5,10-methylene-THF + H2O
         In pathways
         SER-GLYSYN-PWY (superpathway of serine and glycine biosynthesis I)
         PWY-3661 (PWY-3661)
         GLYSYN-PWY (glycine biosynthesis I)
         PWY-1622 (PWY-1622)
         PWY-2201 (PWY-2201)
         PWY-3841 (PWY-3841)
         PWY-2161 (folate polyglutamylation I)
         1CMET2-PWY (formylTHF biosynthesis I)
         PWY-5497 (PWY-5497)
         PWY-181 (PWY-181)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 290
Effective number of orgs (counting one per cluster within 468 clusters): 192

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola6
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A6
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110186
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103316
XFAS405440 ncbi Xylella fastidiosa M126
XFAS183190 ncbi Xylella fastidiosa Temecula16
XFAS160492 ncbi Xylella fastidiosa 9a5c6
XCAM487884 Xanthomonas campestris pv. paulliniae6
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-106
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80046
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339136
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3066
XAUT78245 ncbi Xanthobacter autotrophicus Py25
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1146
VEIS391735 ncbi Verminephrobacter eiseniae EF01-26
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TTUR377629 ncbi Teredinibacter turnerae T79016
TSP1755 Thermoanaerobacter sp.6
TROS309801 ncbi Thermomicrobium roseum DSM 51595
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332236
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
TCRU317025 ncbi Thiomicrospira crunogena XCL-26
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen6
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
SSP94122 ncbi Shewanella sp. ANA-36
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB36
SPRO399741 ncbi Serratia proteamaculans 5686
SPNE488221 ncbi Streptococcus pneumoniae 705856
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-66
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-146
SPNE171101 ncbi Streptococcus pneumoniae R66
SPNE170187 ncbi Streptococcus pneumoniae G546
SPNE1313 Streptococcus pneumoniae6
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SONE211586 ncbi Shewanella oneidensis MR-16
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLOI323850 ncbi Shewanella loihica PV-46
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23385
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT185
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-406
SBOY300268 ncbi Shigella boydii Sb2276
SBAL402882 ncbi Shewanella baltica OS1856
SBAL399599 ncbi Shewanella baltica OS1956
SAUR93062 ncbi Staphylococcus aureus aureus COL5
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83255
SAUR359787 ncbi Staphylococcus aureus aureus JH15
SAUR273036 ncbi Staphylococcus aureus RF1225
SAUR196620 ncbi Staphylococcus aureus aureus MW25
SAUR158879 ncbi Staphylococcus aureus aureus N3155
SAUR158878 ncbi Staphylococcus aureus aureus Mu505
SACI56780 ncbi Syntrophus aciditrophicus SB6
RSP357808 ncbi Roseiflexus sp. RS-15
RSP101510 ncbi Rhodococcus jostii RHA15
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RMET266264 ncbi Ralstonia metallidurans CH345
RFER338969 ncbi Rhodoferax ferrireducens T1185
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
PTHE370438 ncbi Pelotomaculum thermopropionicum SI6
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP56811 Psychrobacter sp.6
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-16
PSP296591 ncbi Polaromonas sp. JS6665
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PPRO298386 ncbi Photobacterium profundum SS96
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257455
PNAP365044 ncbi Polaromonas naphthalenivorans CJ25
PMUL272843 ncbi Pasteurella multocida multocida Pm706
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PING357804 ncbi Psychromonas ingrahamii 376
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PCRY335284 ncbi Psychrobacter cryohalolentis K56
PCAR338963 ncbi Pelobacter carbinolicus DSM 23806
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PARC259536 ncbi Psychrobacter arcticus 273-46
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
OIHE221109 ncbi Oceanobacillus iheyensis HTE8316
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NOCE323261 ncbi Nitrosococcus oceani ATCC 197076
NMUL323848 ncbi Nitrosospira multiformis ATCC 251966
NMEN374833 ncbi Neisseria meningitidis 0534425
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197186
MXAN246197 ncbi Myxococcus xanthus DK 16226
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-15
MTHE264732 ncbi Moorella thermoacetica ATCC 390735
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E6
MPET420662 ncbi Methylibium petroleiphilum PM15
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK5
MFLA265072 ncbi Methylobacillus flagellatus KT6
MCAP243233 ncbi Methylococcus capsulatus Bath6
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P25
MBOV233413 ncbi Mycobacterium bovis AF2122/975
MAVI243243 ncbi Mycobacterium avium 1045
MAQU351348 ncbi Marinobacter aquaeolei VT86
LSPH444177 ncbi Lysinibacillus sphaericus C3-416
LPNE400673 ncbi Legionella pneumophila Corby5
LPNE297246 ncbi Legionella pneumophila Paris5
LPNE297245 ncbi Legionella pneumophila Lens5
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 15
LLAC272623 ncbi Lactococcus lactis lactis Il14035
LCHO395495 ncbi Leptothrix cholodnii SP-65
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille5
ILOI283942 ncbi Idiomarina loihiensis L2TR6
HSOM228400 ncbi Haemophilus somnus 23366
HSOM205914 ncbi Haemophilus somnus 129PT6
HMOD498761 ncbi Heliobacterium modesticaldum Ice16
HINF71421 ncbi Haemophilus influenzae Rd KW206
HINF374930 ncbi Haemophilus influenzae PittEE6
HINF281310 ncbi Haemophilus influenzae 86-028NP6
HHAL349124 ncbi Halorhodospira halophila SL16
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23966
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237795
HARS204773 ncbi Herminiimonas arsenicoxydans5
GURA351605 ncbi Geobacter uraniireducens Rf46
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GSUL243231 ncbi Geobacter sulfurreducens PCA6
GMET269799 ncbi Geobacter metallireducens GS-156
GKAU235909 ncbi Geobacillus kaustophilus HTA4266
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-005
FTUL418136 ncbi Francisella tularensis tularensis WY96-34185
FTUL401614 ncbi Francisella novicida U1125
FTUL393115 ncbi Francisella tularensis tularensis FSC1985
FTUL393011 ncbi Francisella tularensis holarctica OSU185
FTUL351581 Francisella tularensis holarctica FSC2005
FRANT ncbi Francisella tularensis tularensis SCHU S45
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250175
ESP42895 Enterobacter sp.6
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O15
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough5
DSP255470 ncbi Dehalococcoides sp. CBDB15
DSP216389 ncbi Dehalococcoides sp. BAV15
DRED349161 ncbi Desulfotomaculum reducens MI-16
DPSY177439 ncbi Desulfotalea psychrophila LSv545
DOLE96561 ncbi Desulfococcus oleovorans Hxd36
DNOD246195 ncbi Dichelobacter nodosus VCS1703A6
DHAF138119 ncbi Desulfitobacterium hafniense Y516
DETH243164 ncbi Dehalococcoides ethenogenes 1955
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G205
DARO159087 ncbi Dechloromonas aromatica RCB6
CVIO243365 ncbi Chromobacterium violaceum ATCC 124726
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA5
CTET212717 ncbi Clostridium tetani E885
CSAL290398 ncbi Chromohalobacter salexigens DSM 30436
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)6
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CPER289380 ncbi Clostridium perfringens SM1016
CPER195103 ncbi Clostridium perfringens ATCC 131246
CPER195102 ncbi Clostridium perfringens 136
CNOV386415 ncbi Clostridium novyi NT6
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3825
CKLU431943 ncbi Clostridium kluyveri DSM 5556
CJAP155077 Cellvibrio japonicus6
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29016
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C5
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1116
CBUR360115 ncbi Coxiella burnetii RSA 3316
CBUR227377 ncbi Coxiella burnetii RSA 4936
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto6
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6576
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B6
CBOT498213 ncbi Clostridium botulinum B1 str. Okra6
CBOT441772 ncbi Clostridium botulinum F str. Langeland6
CBOT441771 ncbi Clostridium botulinum A str. Hall6
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193976
CBOT36826 Clostridium botulinum A6
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN5
CBLO203907 ncbi Candidatus Blochmannia floridanus5
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80526
CACE272562 ncbi Clostridium acetobutylicum ATCC 8246
BWEI315730 ncbi Bacillus weihenstephanensis KBAB46
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTHU412694 ncbi Bacillus thuringiensis Al Hakam6
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-276
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13305
BSUB ncbi Bacillus subtilis subtilis 1686
BSP36773 Burkholderia sp.6
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)5
BPUM315750 ncbi Bacillus pumilus SAFR-0325
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii6
BPER257313 ncbi Bordetella pertussis Tohama I6
BPAR257311 ncbi Bordetella parapertussis 128226
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233445
BLIC279010 ncbi Bacillus licheniformis ATCC 145806
BHAL272558 ncbi Bacillus halodurans C-1256
BCLA66692 ncbi Bacillus clausii KSM-K166
BCIC186490 Candidatus Baumannia cicadellinicola5
BCER572264 ncbi Bacillus cereus 03BB1026
BCER405917 Bacillus cereus W6
BCER315749 ncbi Bacillus cytotoxicus NVH 391-986
BCER288681 ncbi Bacillus cereus E33L6
BCER226900 ncbi Bacillus cereus ATCC 145796
BCEN331272 ncbi Burkholderia cenocepacia HI24246
BCEN331271 ncbi Burkholderia cenocepacia AU 10546
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB506
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1005
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)5
BANT592021 ncbi Bacillus anthracis A02486
BANT568206 ncbi Bacillus anthracis CDC 6846
BANT261594 ncbi Bacillus anthracis Ames Ancestor6
BANT260799 ncbi Bacillus anthracis Sterne6
BAMY326423 ncbi Bacillus amyloliquefaciens FZB426
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
ASP76114 ncbi Aromatoleum aromaticum EbN16
ASP62977 ncbi Acinetobacter sp. ADP16
ASP62928 ncbi Azoarcus sp. BH726
ASP232721 ncbi Acidovorax sp. JS426
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL036
APLE416269 ncbi Actinobacillus pleuropneumoniae L206
AMET293826 ncbi Alkaliphilus metalliredigens QYMF5
AHYD196024 Aeromonas hydrophila dhakensis6
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232706
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-16
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C6
ABOR393595 ncbi Alcanivorax borkumensis SK26
ABAU360910 ncbi Bordetella avium 197N5
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455
AAVE397945 ncbi Acidovorax citrulli AAC00-16


Names of the homologs of the genes in the group in each of these orgs
  EG11406   EG11322   EG11321   EG11320   EG10666   EG10408   
YPSE349747 YPSIP31758_1751YPSIP31758_3116YPSIP31758_3117YPSIP31758_3118YPSIP31758_3115YPSIP31758_1158
YPSE273123 YPTB2304YPTB0935YPTB0934YPTB0933YPTB0936YPTB2869
YPES386656 YPDSF_0756YPDSF_2817YPDSF_2818YPDSF_2819YPDSF_2816YPDSF_2251
YPES377628 YPN_1845YPN_0906YPN_0905YPN_0904YPN_0907YPN_1232
YPES360102 YPA_1736YPA_2676YPA_2677YPA_2678YPA_2675YPA_2347
YPES349746 YPANGOLA_A2577YPANGOLA_A3164YPANGOLA_A3163YPANGOLA_A3162YPANGOLA_A3165YPANGOLA_A0445
YPES214092 YPO2391YPO3182YPO3183YPO3184YPO3181YPO2907
YPES187410 Y1946Y1001Y1000Y0999Y1002Y1322
YENT393305 YE2162YE3160YE3161YE3162YE3159YE1047
XORY360094 XOOORF_1046XOOORF_1048XOOORF_1043XOOORF_1041XOOORF_1049XOOORF_1039
XORY342109 XOO3633XOO3631XOO3635XOO3637XOO3630XOO3639
XORY291331 XOO3854XOO3852XOO3856XOO3858XOO3851XOO3860
XFAS405440 XFASM12_1907XFASM12_1905XFASM12_1908XFASM12_1910XFASM12_1904XFASM12_1912
XFAS183190 PD_1746PD_1744PD_1747PD_1748PD_1743PD_1750
XFAS160492 XF0952XF0954XF0950XF0948XF0955XF0946
XCAM487884 XCC-B100_3660XCC-B100_3658XCC-B100_3664XCC-B100_3666XCC-B100_3657XCC-B100_3667
XCAM316273 XCAORF_0859XCAORF_0861XCAORF_0857XCAORF_0855XCAORF_0862XCAORF_0854
XCAM314565 XC_3539XC_3537XC_3541XC_3543XC_3536XC_3544
XCAM190485 XCC0695XCC0697XCC0693XCC0691XCC0698XCC0690
XAXO190486 XAC0748XAC0750XAC0746XAC0744XAC0751XAC0743
XAUT78245 XAUT_4279XAUT_4278XAUT_4277XAUT_4281XAUT_4276
VVUL216895 VV1_2560VV1_0319VV1_0323VV1_0324VV1_0318VV1_0286
VVUL196600 VV1729VV0864VV0861VV0860VV0865VV0898
VPAR223926 VP1480VP0682VP0679VP0678VP0683VP0715
VFIS312309 VF1414VF0703VF0700VF0699VF0704VF0695
VEIS391735 VEIS_4434VEIS_4792VEIS_2821VEIS_4247VEIS_4793VEIS_4246
VCHO345073 VC0395_A1860VC0395_A1858VC0395_A1861VC0395_A1862VC0395_A1857VC0395_A0465
VCHO VC2270VC2268VC2271VC2272VC2267VC0941
TTUR377629 TERTU_3703TERTU_3701TERTU_3704TERTU_3705TERTU_3700TERTU_3707
TSP1755 TETH514_0021TETH514_0023TETH514_0020TETH514_1998TETH514_1534TETH514_1008
TROS309801 TRD_0503TRD_0505TRD_0502TRD_0069TRD_1619
TPSE340099 TETH39_0022TETH39_0024TETH39_0021TETH39_0824TETH39_1097TETH39_0524
TDEN292415 TBD_2191TBD_2168TBD_2166TBD_2192TBD_2165
TCRU317025 TCR_1399TCR_1397TCR_1400TCR_1401TCR_1396TCR_1402
SWOL335541 SWOL_1221SWOL_1219SWOL_1222SWOL_0949SWOL_0564SWOL_2392
STYP99287 STM1426STM0417STM0416STM0415STM0418STM2555
SSP94122 SHEWANA3_2040SHEWANA3_1099SHEWANA3_1096SHEWANA3_1095SHEWANA3_1100SHEWANA3_1094
SSON300269 SSO_1494SSO_0392SSO_0391SSO_0390SSO_0393SSO_2634
SSED425104 SSED_2118SSED_1276SSED_1273SSED_1272SSED_1277SSED_1271
SPRO399741 SPRO_2190SPRO_1073SPRO_1072SPRO_1071SPRO_1074SPRO_3638
SPNE488221 SP70585_0240SP70585_0238SP70585_0241SP70585_1752SP70585_0502SP70585_1063
SPNE487214 SPH_0280SPH_0278SPH_0281SPH_1821SPH_0539SPH_1127
SPNE487213 SPT_0214SPT_0212SPT_0215SPT_1651SPT_0468SPT_1076
SPNE171101 SPR0163SPR0161SPR0164SPR1557SPR0390SPR0928
SPNE170187 SPN08034SPN08032SPN08035SPN02008SPN06049SPN07066
SPNE1313 SPJ_0194SPJ_0192SPJ_0195SPJ_1608SPJ_0417SPJ_0963
SPEA398579 SPEA_2267SPEA_1165SPEA_1162SPEA_1161SPEA_1166SPEA_1160
SONE211586 SO_2296SO_3466SO_3469SO_3470SO_3465SO_3471
SMEL266834 SMC01773SMC01772SMC01771SMC01778SMC01770
SMED366394 SMED_0819SMED_0818SMED_0817SMED_0822SMED_0816
SLOI323850 SHEW_2036SHEW_1190SHEW_1187SHEW_1186SHEW_1191SHEW_1185
SHIGELLA RIBERIBHRIBDYBADNUSBGLYA
SHAL458817 SHAL_2017SHAL_1208SHAL_1205SHAL_1204SHAL_1209SHAL_1203
SGLO343509 SG1439SG0652SG0651SG0650SG0653SG1775
SFLE373384 SFV_1684SFV_0380SFV_0379SFV_0378SFV_0381SFV_2599
SFLE198214 AAN43269.1AAN42010.1AAN42009.1AAN42008.1AAN42011.1AAN44095.1
SERY405948 SACE_2122SACE_2124SACE_2887SACE_1763SACE_2076
SENT454169 SEHA_C1559SEHA_C0519SEHA_C0518SEHA_C0517SEHA_C0520SEHA_C2817
SENT321314 SCH_1445SCH_0458SCH_0457SCH_0456SCH_0459SCH_2549
SENT295319 SPA1427SPA2306SPA2307SPA2308SPA2305SPA0311
SENT220341 STY1696STY0456STY0455STY0457STY2802
SENT209261 T1294T2446T2447T2448T2445T0301
SDYS300267 SDY_1888SDY_0319SDY_0320SDY_0321SDY_0318SDY_2741
SDEN318161 SDEN_1703SDEN_1147SDEN_1144SDEN_1143SDEN_1148SDEN_1142
SDEG203122 SDE_3457SDE_3455SDE_3458SDE_3459SDE_3454SDE_0417
SBOY300268 SBO_1469SBO_0309SBO_0308SBO_0307SBO_0310SBO_2579
SBAL402882 SHEW185_2225SHEW185_3155SHEW185_3159SHEW185_3160SHEW185_3154SHEW185_3161
SBAL399599 SBAL195_2333SBAL195_3300SBAL195_3303SBAL195_3304SBAL195_3299SBAL195_3305
SAUR93062 SACOL1819SACOL1817SACOL1733SACOL1569SACOL2105
SAUR93061 SAOUHSC_01888SAOUHSC_01886SAOUHSC_01793SAOUHSC_01621SAOUHSC_02354
SAUR359787 SAURJH1_1857SAURJH1_1855SAURJH1_1777SAURJH1_1616SAURJH1_2187
SAUR273036 SAB1627CSAB1625CSAB1545CSAB1397CSAB1997C
SAUR196620 MW1710MW1708MW1629MW1477MW2037
SAUR158879 SA1588SA1586SA1509SA1355SA1915
SAUR158878 SAV1770SAV1767SAV1686SAV1524SAV2113
SACI56780 SYN_02370SYN_02372SYN_00578SYN_02369SYN_02373SYN_02367
RSP357808 ROSERS_0969ROSERS_0970ROSERS_0989ROSERS_0985ROSERS_0389
RSP101510 RHA1_RO07169RHA1_RO07171RHA1_RO07168RHA1_RO06790RHA1_RO07146
RSOL267608 RSC0712RSC0715RSC0728RSC0711RSC0729
RPAL316056 RPC_2662RPC_2661RPC_2660RPC_2664RPC_2659
RMET266264 RMET_2694RMET_2688RMET_2681RMET_2695RMET_2680
RFER338969 RFER_2669RFER_2666RFER_2659RFER_2670RFER_2658
REUT381666 H16_A2855H16_A2848H16_A2835H16_A2856H16_A2834
REUT264198 REUT_A0769REUT_A0776REUT_A0789REUT_A0768REUT_A0790
PTHE370438 PTH_1760PTH_1758PTH_1761PTH_1843PTH_1179PTH_2824
PSYR223283 PSPTO_0691PSPTO_0693PSPTO_0690PSPTO_0689PSPTO_0694PSPTO_0461
PSYR205918 PSYR_4461PSYR_4459PSYR_4462PSYR_4463PSYR_4458PSYR_4712
PSTU379731 PST_0836PST_0838PST_0835PST_0834PST_0839PST_0940
PSP56811 PSYCPRWF_2384PSYCPRWF_2285PSYCPRWF_2385PSYCPRWF_2386PSYCPRWF_2284PSYCPRWF_2083
PSP312153 PNUC_0271PNUC_0265PNUC_0270PNUC_0280PNUC_0264PNUC_0279
PSP296591 BPRO_2886BPRO_2883BPRO_2875BPRO_2887BPRO_2874
PPUT76869 PPUTGB1_2867PPUTGB1_0563PPUTGB1_0560PPUTGB1_0559PPUTGB1_0564PPUTGB1_3094
PPUT351746 PPUT_2775PPUT_0552PPUT_0549PPUT_0548PPUT_0553PPUT_0702
PPUT160488 PP_2916PP_0517PP_0514PP_0513PP_0518PP_0671
PPRO298386 PBPRA2176PBPRA0800PBPRA0797PBPRA0796PBPRA0801PBPRA0795
PPEN278197 PEPE_1819PEPE_1817PEPE_0691PEPE_0816PEPE_1327
PNAP365044 PNAP_2916PNAP_2915PNAP_2908PNAP_2919PNAP_2907
PMUL272843 PM0650PM0731PM0749PM0750PM0730PM0225
PMEN399739 PMEN_3856PMEN_3854PMEN_3857PMEN_3858PMEN_3853PMEN_4132
PLUM243265 PLU2610PLU3898PLU3899PLU3900PLU3897PLU3291
PING357804 PING_3144PING_1443PING_1440PING_1439PING_1444PING_1438
PHAL326442 PSHAA1734PSHAA2371PSHAA2374PSHAA2375PSHAA2370PSHAA2376
PFLU220664 PFL_5521PFL_5519PFL_5522PFL_5523PFL_5518PFL_5346
PFLU216595 PFLU5472PFLU5470PFLU5473PFLU5474PFLU5469PFLU5652
PFLU205922 PFL_5018PFL_5016PFL_5019PFL_5020PFL_5015PFL_5208
PENT384676 PSEEN0589PSEEN0591PSEEN0588PSEEN0587PSEEN0592PSEEN0806
PCRY335284 PCRYO_2469PCRYO_2392PCRYO_2470PCRYO_2471PCRYO_2393PCRYO_0318
PCAR338963 PCAR_1446PCAR_1448PCAR_1445PCAR_1444PCAR_1449PCAR_1442
PATL342610 PATL_1312PATL_1314PATL_1311PATL_1310PATL_1315PATL_1299
PARC259536 PSYC_2140PSYC_2069PSYC_2141PSYC_2142PSYC_2070PSYC_0290
PAER208964 PA4055PA4053PA4056PA4057PA4052PA5415
PAER208963 PA14_11410PA14_11430PA14_11400PA14_11380PA14_11450PA14_33010
OIHE221109 OB3215OB3213OB0423OB2158OB1881OB2985
OANT439375 OANT_2527OANT_2528OANT_2529OANT_2525OANT_2530
NOCE323261 NOC_2024NOC_0802NOC_2025NOC_2026NOC_0803NOC_2027
NMUL323848 NMUL_A0009NMUL_A0011NMUL_A0006NMUL_A0005NMUL_A0012NMUL_A0004
NMEN374833 NMCC_1128NMCC_0641NMCC_0411NMCC_0640NMCC_0971
NMEN272831 NMC1148NMC0635NMC0403NMC0634NMC1017
NMEN122587 NMA1416NMA0886NMA0644NMA0885NMA1254
NMEN122586 NMB_1247NMB_0684NMB_1817NMB_0683NMB_1055
NGON242231 NGO0755NGO0257NGO0089NGO0256NGO0866
NEUT335283 NEUT_2515NEUT_1091NEUT_1551NEUT_2518NEUT_1552
NEUR228410 NE2555NE2557NE0793NE1432NE2558NE1433
MXAN246197 MXAN_4763MXAN_4762MXAN_4764MXAN_4765MXAN_4761MXAN_4766
MVAN350058 MVAN_2693MVAN_2695MVAN_2690MVAN_2443MVAN_2652
MTHE264732 MOTH_0916MOTH_0918MOTH_0915MOTH_1521MOTH_2390
MSUC221988 MS1313MS0976MS1374MS1375MS0975MS1295
MPET420662 MPE_A2946MPE_A2945MPE_A2939MPE_A2949MPE_A3262
MGIL350054 MFLV_3721MFLV_3718MFLV_3727MFLV_3954MFLV_3751
MFLA265072 MFLA_2097MFLA_0492MFLA_1915MFLA_1916MFLA_0493MFLA_1917
MCAP243233 MCA_1865MCA_1655MCA_1658MCA_1659MCA_1654MCA_1660
MBOV410289 BCG_1473BCG_1477BCG_1470BCG_2731CBCG_2555C
MBOV233413 MB1447MB1451MB1444MB2737CMB2562C
MAVI243243 MAV_3366MAV_3364MAV_3368MAV_3612MAV_3410
MAQU351348 MAQU_1940MAQU_0845MAQU_0843MAQU_0842MAQU_0846MAQU_0841
LSPH444177 BSPH_2043BSPH_2045BSPH_1751BSPH_4106BSPH_3515BSPH_1005
LPNE400673 LPC_0645LPC_0647LPC_2566LPC_2565LPC_2567
LPNE297246 LPP1181LPP1183LPP0792LPP0793LPP0791
LPNE297245 LPL1187LPL1189LPL0763LPL0764LPL0762
LPNE272624 LPG1178LPG1180LPG0726LPG0727LPG0725
LLAC272623 L0164L0166L0163L157023L0082
LCHO395495 LCHO_2113LCHO_2934LCHO_2928LCHO_2937LCHO_2927
KPNE272620 GKPORF_B1099GKPORF_B4695GKPORF_B4694GKPORF_B4693GKPORF_B4696GKPORF_B2207
JSP375286 MMA_2339MMA_2434MMA_2442MMA_2338MMA_2443
ILOI283942 IL1402IL2142IL1870IL1871IL2141IL1872
HSOM228400 HSM_1281HSM_1299HSM_1534HSM_1535HSM_1300HSM_0382
HSOM205914 HS_0812HS_0830HS_1050HS_1051HS_0831HS_1627
HMOD498761 HM1_2142HM1_2144HM1_2141HM1_2069HM1_0286HM1_1090
HINF71421 HI_1613HI_1303HI_0944HI_0943HI_1304HI_0889
HINF374930 CGSHIEE_05720CGSHIEE_05160CGSHIEE_07245CGSHIEE_07250CGSHIEE_05155CGSHIEE_07580
HINF281310 NTHI1429NTHI1616NTHI1115NTHI1114NTHI1617NTHI1054
HHAL349124 HHAL_0899HHAL_0897HHAL_0900HHAL_0901HHAL_0896HHAL_0902
HDUC233412 HD_1162HD_1165HD_1161HD_1374HD_0435
HCHE349521 HCH_02673HCH_05954HCH_05957HCH_05958HCH_05953HCH_05959
HAUR316274 HAUR_1304HAUR_1586HAUR_2423HAUR_1584HAUR_0751
HARS204773 HEAR1037HEAR2372HEAR2379HEAR1038HEAR2380
GURA351605 GURA_2182GURA_2180GURA_2183GURA_2184GURA_2179GURA_1881
GTHE420246 GTNG_2222GTNG_2225GTNG_2647GTNG_2328GTNG_3314
GSUL243231 GSU_1689GSU_1691GSU_1688GSU_1687GSU_1692GSU_1607
GMET269799 GMET_1625GMET_1627GMET_1624GMET_1623GMET_1628GMET_1605
GKAU235909 GK2296GK2294GK2297GK2723GK2397GK3369
FTUL458234 FTA_0085FTA_0083FTA_0086FTA_0678FTA_0743
FTUL418136 FTW_1945FTW_1943FTW_1946FTW_0466FTW_0703
FTUL401614 FTN_0113FTN_0111FTN_0114FTN_1384FTN_1259
FTUL393115 FTF1672FTF1674FTF1671FTF1418CFTF1241
FTUL393011 FTH_0073FTH_0071FTH_0074FTH_0644FTH_0705
FTUL351581 FTL_0077FTL_0075FTL_0078FTL_0643FTL_0703
FRANT RIBBRIBHRIBDNUSBGLYA
FPHI484022 FPHI_0714FPHI_0716FPHI_0713FPHI_1303FPHI_1424
ESP42895 ENT638_1784ENT638_0883ENT638_0882ENT638_0881ENT638_0884ENT638_3036
EFER585054 EFER_1382EFER_2610EFER_2611EFER_2612EFER_2609EFER_0634
ECOO157 RIBEZ0516RIBDYBADNUSBGLYA
ECOL83334 ECS2371ECS0468ECS0467ECS0466ECS0469ECS3417
ECOL585397 ECED1_1861ECED1_0438ECED1_0437ECED1_0436ECED1_0439ECED1_2978
ECOL585057 ECIAI39_1394ECIAI39_0261ECIAI39_0262ECIAI39_0263ECIAI39_0260ECIAI39_2754
ECOL585056 ECUMN_1952ECUMN_0453ECUMN_0452ECUMN_0451ECUMN_0454ECUMN_2871
ECOL585055 EC55989_1830EC55989_0425EC55989_0424EC55989_0423EC55989_0426EC55989_2837
ECOL585035 ECS88_1711ECS88_0410ECS88_0409ECS88_0408ECS88_0411ECS88_2721
ECOL585034 ECIAI1_1714ECIAI1_0415ECIAI1_0414ECIAI1_0413ECIAI1_0416ECIAI1_2604
ECOL481805 ECOLC_1967ECOLC_3218ECOLC_3219ECOLC_3220ECOLC_3217ECOLC_1126
ECOL469008 ECBD_1981ECBD_3246ECBD_3247ECBD_3248ECBD_3245ECBD_1133
ECOL439855 ECSMS35_1535ECSMS35_0451ECSMS35_0450ECSMS35_0449ECSMS35_0452ECSMS35_2704
ECOL413997 ECB_01633ECB_00363ECB_00362ECB_00361ECB_00364ECB_02443
ECOL409438 ECSE_1786ECSE_0437ECSE_0436ECSE_0435ECSE_0438ECSE_2838
ECOL405955 APECO1_742APECO1_1595APECO1_1596APECO1_1597APECO1_3980
ECOL364106 UTI89_C1853UTI89_C0437UTI89_C0436UTI89_C0435UTI89_C0439UTI89_C2870
ECOL362663 ECP_1609ECP_0474ECP_0473ECP_0472ECP_0475ECP_2552
ECOL331111 ECE24377A_1876ECE24377A_0446ECE24377A_0445ECE24377A_0444ECE24377A_0447ECE24377A_2836
ECOL316407 ECK1658:JW1654:B1662ECK0409:JW0405:B0415ECK0408:JW0404:B0414ECK0407:JW0403:B0413ECK0410:JW0406:B0416ECK2548:JW2535:B2551
ECOL199310 C2056C0525C0524C0523C0527C3073
ECAR218491 ECA1923ECA1127ECA1126ECA1125ECA1128ECA4046
DVUL882 DVU_1200DVU_1198DVU_1201DVU_1197DVU_1203
DSP255470 CBDBA1104CBDBA1102CBDBA1105CBDBA286CBDBA1206
DSP216389 DEHABAV1_1000DEHABAV1_0998DEHABAV1_1001DEHABAV1_0323DEHABAV1_1089
DRED349161 DRED_2092DRED_2090DRED_2093DRED_0692DRED_1069DRED_3162
DPSY177439 DP1099DP1101DP2785DP2786DP1102
DOLE96561 DOLE_2078DOLE_2076DOLE_2079DOLE_2080DOLE_2075DOLE_2082
DNOD246195 DNO_0473DNO_0471DNO_0474DNO_0475DNO_0470DNO_0476
DHAF138119 DSY1663DSY1665DSY1662DSY0321DSY2364DSY4927
DETH243164 DET_1189DET_1187DET_1190DET_0344DET_1278
DDES207559 DDE_2435DDE_2437DDE_2434DDE_2438DDE_2432
DARO159087 DARO_4095DARO_3738DARO_0605DARO_0604DARO_3739DARO_0603
CVIO243365 CV_2387CV_2390CV_1290CV_1287CV_2391CV_1286
CVES412965 COSY_0462COSY_0464COSY_0726COSY_0465COSY_0584
CTET212717 CTC_00672CTC_00674CTC_00671CTC_01129CTC_01581
CSAL290398 CSAL_2099CSAL_2583CSAL_2585CSAL_2586CSAL_2582CSAL_2617
CRUT413404 RMAG_0504RMAG_0506RMAG_0800RMAG_0631RMAG_0507RMAG_0632
CPSY167879 CPS_1531CPS_0730CPS_0729CPS_1532CPS_4031
CPER289380 CPR_0531CPR_0533CPR_0530CPR_1730CPR_1792CPR_1895
CPER195103 CPF_0547CPF_0549CPF_0546CPF_2012CPF_2078CPF_2184
CPER195102 CPE0567CPE0569CPE0566CPE1759CPE1824CPE1929
CNOV386415 NT01CX_0714NT01CX_0712NT01CX_0715NT01CX_2257NT01CX_1978NT01CX_1853
CMIC443906 CMM_0962CMM_0960CMM_0963CMM_1847CMM_1792
CKLU431943 CKL_2168CKL_2166CKL_2169CKL_1344CKL_1227CKL_1284
CJAP155077 CJA_2696CJA_2694CJA_2698CJA_2699CJA_2693CJA_2703
CHYD246194 CHY_1474CHY_1472CHY_1475CHY_2052CHY_1994CHY_2557
CDES477974 DAUD_0624DAUD_0626DAUD_0623DAUD_1020DAUD_2147
CBUR434922 COXBU7E912_0657COXBU7E912_0659COXBU7E912_0655COXBU7E912_0578COXBU7E912_0579COXBU7E912_0577
CBUR360115 COXBURSA331_A0761COXBURSA331_A0763COXBURSA331_A0758COXBURSA331_A1579COXBURSA331_A1578COXBURSA331_A1580
CBUR227377 CBU_0646CBU_0648CBU_0643CBU_1418CBU_1417CBU_1419
CBOT536232 CLM_3261CLM_3259CLM_3262CLM_2834CLM_2103CLM_2902
CBOT515621 CLJ_B3119CLJ_B3117CLJ_B3120CLJ_B2760CLJ_B2073CLJ_B2825
CBOT508765 CLL_A1296CLL_A1298CLL_A1295CLL_A1193CLL_A2406CLL_A1084
CBOT498213 CLD_1677CLD_1679CLD_1676CLD_2106CLD_2751CLD_1970
CBOT441772 CLI_2921CLI_2919CLI_2922CLI_2592CLI_1950CLI_2658
CBOT441771 CLC_2764CLC_2762CLC_2765CLC_2388CLC_1830CLC_2467
CBOT441770 CLB_2831CLB_2829CLB_2832CLB_2406CLB_1823CLB_2536
CBOT36826 CBO2865CBO2863CBO2866CBO2530CBO1886CBO2595
CBLO291272 BPEN_377BPEN_241BPEN_240BPEN_242BPEN_556
CBLO203907 BFL366BFL235BFL234BFL236BFL536
CBEI290402 CBEI_1225CBEI_1227CBEI_1224CBEI_1123CBEI_1701CBEI_1868
CACE272562 CAC0591CAC0593CAC0590CAC1698CAC2084CAC2264
BWEI315730 BCERKBAB4_3942BCERKBAB4_3944BCERKBAB4_3941BCERKBAB4_4411BCERKBAB4_4034BCERKBAB4_5114
BVIE269482 BCEP1808_4180BCEP1808_0873BCEP1808_0877BCEP1808_0739BCEP1808_0872BCEP1808_0738
BTHU412694 BALH_3726BALH_3728BALH_3725BALH_4164BALH_3790BALH_4816
BTHU281309 BT9727_3852BT9727_3854BT9727_3851BT9727_4311BT9727_3924BT9727_4998
BTHA271848 BTH_I1530BTH_I1542BTH_I1380BTH_I1529BTH_I1379
BSUI470137 BSUIS_A0802BSUIS_A0801BSUIS_A0800BSUIS_A0804BSUIS_A0799
BSUI204722 BR_0768BR_0767BR_0766BR_0770BR_0765
BSUB BSU23270BSU23250BSU23280BSU29000BSU24320BSU36900
BSP36773 BCEP18194_B2300BCEP18194_A4057BCEP18194_A4064BCEP18194_A3896BCEP18194_A4056BCEP18194_A3895
BSP107806 BU112BU459BU462BU463BU289
BPUM315750 BPUM_2061BPUM_2059BPUM_0703BPUM_2164BPUM_3335
BPSE320373 BURPS668_3017BURPS668_3012BURPS668_3195BURPS668_3018BURPS668_3196
BPSE320372 BURPS1710B_A3360BURPS1710B_A3355BURPS1710B_A3517BURPS1710B_A3361BURPS1710B_A3518
BPSE272560 BPSL2627BPSL2624BPSL2757BPSL2628BPSL2758
BPET94624 BPET0617BPET3957BPET0616BPET0615BPET3956BPET0614
BPER257313 BP2874BP3485BP2948BP2951BP3486BP2952
BPAR257311 BPP0955BPP0858BPP3871BPP3874BPP0859BPP3875
BMAL320389 BMA10247_2017BMA10247_2013BMA10247_1941BMA10247_2018BMA10247_1942
BMAL320388 BMASAVP1_A0763BMASAVP1_A0767BMASAVP1_A0835BMASAVP1_A0762BMASAVP1_A0834
BMAL243160 BMA_2146BMA_2143BMA_2074BMA_2147BMA_2075
BLIC279010 BL01890BL01888BL01891BL00388BL01528BL03991
BHAL272558 BH1555BH1557BH1554BH3146BH2785BH3765
BCLA66692 ABC1811ABC1813ABC3987ABC2702ABC2466ABC3863
BCIC186490 BCI_0087BCI_0602BCI_0601BCI_0603BCI_0004
BCER572264 BCA_4223BCA_4225BCA_4222BCA_4690BCA_4291BCA_5461
BCER405917 BCE_4180BCE_4182BCE_4179BCE_4711BCE_4255BCE_5441
BCER315749 BCER98_2809BCER98_2811BCER98_2808BCER98_3266BCER98_2875BCER98_3835
BCER288681 BCE33L3866BCE33L3868BCE33L3865BCE33L4322BCE33L3935BCE33L5015
BCER226900 BC_4110BC_4112BC_4109BC_4581BC_4181BC_5316
BCEN331272 BCEN2424_3795BCEN2424_0956BCEN2424_0960BCEN2424_0807BCEN2424_0955BCEN2424_0806
BCEN331271 BCEN_4568BCEN_0477BCEN_0481BCEN_0324BCEN_0476BCEN_0323
BCAN483179 BCAN_A0781BCAN_A0780BCAN_A0779BCAN_A0783BCAN_A0778
BBRO257310 BB1167BB0952BB4344BB4347BB0953BB4348
BBAC264462 BD3039BD3037BD1098BD1097BD2007
BAPH198804 BUSG104BUSG443BUSG446BUSG447BUSG278
BANT592021 BAA_4354BAA_4357BAA_4353BAA_4835BAA_4423BAA_5586
BANT568206 BAMEG_4372BAMEG_4375BAMEG_4371BAMEG_4855BAMEG_4441BAMEG_5605
BANT261594 GBAA4332GBAA4334GBAA4331GBAA4824GBAA4406GBAA5558
BANT260799 BAS4019BAS4021BAS4018BAS4476BAS4086BAS5165
BAMY326423 RBAM_021410RBAM_021390RBAM_021420RBAM_026040RBAM_022650RBAM_034060
BAMB398577 BAMMC406_3686BAMMC406_0826BAMMC406_0830BAMMC406_0701BAMMC406_0825BAMMC406_0700
BAMB339670 BAMB_5522BAMB_0817BAMB_0821BAMB_0684BAMB_0816BAMB_0683
ASP76114 EBA3569EBA3566EBA1045EBA1044EBA3564EBA1042
ASP62977 ACIAD0249ACIAD3571ACIAD0247ACIAD0246ACIAD3572ACIAD2255
ASP62928 AZO0320AZO0318AZO2803AZO2802AZO0317AZO2801
ASP232721 AJS_4077AJS_2767AJS_3190AJS_1659AJS_2768AJS_1660
ASAL382245 ASA_2183ASA_0982ASA_0979ASA_0978ASA_0983ASA_0975
APLE434271 APJL_0403APJL_0405APJL_0402APJL_0711APJL_0202APJL_0212
APLE416269 APL_0383APL_0385APL_0382APL_0711APL_0201APL_0211
AMET293826 AMET_1019AMET_1021AMET_1018AMET_2868AMET_2365
AHYD196024 AHA_2116AHA_3329AHA_3333AHA_3334AHA_3328AHA_3336
AFER243159 AFE_2730AFE_2728AFE_2731AFE_2732AFE_2727AFE_2733
AEHR187272 MLG_0376MLG_0378MLG_0375MLG_0374MLG_0379MLG_0373
ADEH290397 ADEH_2741ADEH_2739ADEH_2742ADEH_2743ADEH_2738ADEH_2744
ABOR393595 ABO_2173ABO_2171ABO_2174ABO_2175ABO_2170ABO_2176
ABAU360910 BAV0570BAV2957BAV2960BAV0571BAV2961
ABAC204669 ACID345_1214ACID345_3337ACID345_4041ACID345_1215ACID345_1264
AAVE397945 AAVE_4731AAVE_2231AAVE_3555AAVE_2993AAVE_2230AAVE_2992


Organism features enriched in list (features available for 276 out of the 290 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 4.716e-674112
Endospores:No 2.372e-1162211
Endospores:Yes 1.083e-74353
GC_Content_Range4:0-40 1.686e-869213
GC_Content_Range4:40-60 3.375e-7135224
GC_Content_Range7:30-40 3.998e-752166
GC_Content_Range7:50-60 2.811e-876107
Genome_Size_Range5:0-2 7.716e-2323155
Genome_Size_Range5:4-6 4.398e-18135184
Genome_Size_Range5:6-10 0.00761243047
Genome_Size_Range9:0-1 0.0011765527
Genome_Size_Range9:1-2 4.798e-1918128
Genome_Size_Range9:4-5 5.985e-66596
Genome_Size_Range9:5-6 1.802e-117088
Genome_Size_Range9:6-8 0.00362472638
Gram_Stain:Gram_Neg 9.557e-9191333
Habitat:Host-associated 0.000674480206
Habitat:Multiple 0.0000680105178
Habitat:Specialized 0.00358311653
Habitat:Terrestrial 0.00126642331
Motility:No 0.000038051151
Motility:Yes 1.475e-7157267
Optimal_temp.:- 0.0056015135257
Optimal_temp.:35-37 0.00005151313
Oxygen_Req:Facultative 0.0001747115201
Pathogenic_in:Animal 0.00015664566
Pathogenic_in:No 0.000015683226
Shape:Coccobacillus 0.00305391011
Shape:Coccus 0.00016412482
Shape:Irregular_coccus 0.0018023217
Shape:Rod 6.945e-13206347
Shape:Sphere 0.0006022219
Shape:Spiral 8.109e-7334
Temp._range:Hyperthermophilic 5.828e-6123
Temp._range:Mesophilic 0.0004897239473
Temp._range:Psychrophilic 0.001114099
Temp._range:Thermophilic 0.0040383935



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 98
Effective number of orgs (counting one per cluster within 468 clusters): 87

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/271
TWHI203267 ncbi Tropheryma whipplei Twist1
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSOL273057 ncbi Sulfolobus solfataricus P20
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W831
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
MTHE349307 ncbi Methanosaeta thermophila PT1
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1351
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH1
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH461
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BBUR224326 ncbi Borrelia burgdorferi B311
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040


Names of the homologs of the genes in the group in each of these orgs
  EG11406   EG11322   EG11321   EG11320   EG10666   EG10408   
WPIP955 WD_0710
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496 TW0507
TWHI203267 TW237
TVOL273116
TPEN368408
TPAL243276 TP_1015
TACI273075
STOK273063
SSOL273057
SPYO193567
SMAR399550
SACI330779
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199 GRAORF_2714
RAKA293614
PTOR263820
PISL384616
PHOR70601
PGIN242619 PG_1428
PAST100379
PARS340102
PAER178306
PABY272844
OTSU357244
NPHA348780 NP1356A
MTHE349307 MTHE_1241
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952 MM0442
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564 MBUR_1813
MBAR269797 MBAR_A2316
MART243272
MAEO419665
MACE188937 MA3520
LHEL405566 LHV_1614
LDEL390333 LDB1509
LDEL321956 LBUL_1404
IHOS453591
HWAL362976 HQ1396A
HSP64091
HSAL478009
HMUK485914
HMAR272569 RRNAC2367
HBUT415426
CSUL444179
CPEL335992
CMET456442
CMAQ397948
CKOR374847
CHUT269798 CHU_3720
BXEN266265
BTUR314724 BT0107
BLON206672 BL1312
BHER314723 BH0107
BGAR290434
BFRA295405 BF0956
BFRA272559 BF0875
BBUR224326 BB_0107
BAFZ390236
AYEL322098
AURANTIMONAS
APHA212042 APH_0037
APER272557
AFUL224325


Organism features enriched in list (features available for 92 out of the 98 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.005837959
Arrangment:Chains 0.0067177792
Arrangment:Pairs 0.00057077112
Arrangment:Singles 0.002394957286
Disease:Rocky_Mountain_Spotted_Fever 0.003822133
Endospores:No 4.816e-1060211
GC_Content_Range4:0-40 0.000027851213
GC_Content_Range4:60-100 0.00005889145
GC_Content_Range7:0-30 1.770e-82347
GC_Content_Range7:60-70 0.00027559134
Genome_Size_Range5:0-2 1.367e-1962155
Genome_Size_Range5:2-4 0.008579222197
Genome_Size_Range5:4-6 3.086e-97184
Genome_Size_Range5:6-10 0.0020973147
Genome_Size_Range9:0-1 1.062e-91827
Genome_Size_Range9:1-2 9.213e-1044128
Genome_Size_Range9:3-4 0.0019228477
Genome_Size_Range9:4-5 0.0001163496
Genome_Size_Range9:5-6 0.0000852388
Gram_Stain:Gram_Neg 0.000073836333
Gram_Stain:Gram_Pos 1.697e-67150
Habitat:Multiple 5.726e-88178
Habitat:Specialized 0.00032561853
Optimal_temp.:35-40 0.003822133
Optimal_temp.:42 0.003822133
Oxygen_Req:Anaerobic 1.789e-633102
Pathogenic_in:Animal 0.0024951366
Salinity:Extreme_halophilic 0.001350457
Shape:Irregular_coccus 1.071e-91417
Shape:Rod 3.367e-831347
Shape:Sphere 2.866e-111619
Temp._range:Hyperthermophilic 5.101e-81523
Temp._range:Mesophilic 0.000035460473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 6
Effective number of orgs (counting one per cluster within 468 clusters): 3

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00693507556
SPNE170187 ncbi Streptococcus pneumoniae G54 0.00762557676
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-14 0.00863467836
SPNE1313 Streptococcus pneumoniae 0.00904067896
SPNE171101 ncbi Streptococcus pneumoniae R6 0.00932007936
SPNE488221 ncbi Streptococcus pneumoniae 70585 0.00967947986


Names of the homologs of the genes in the group in each of these orgs
  EG11406   EG11322   EG11321   EG11320   EG10666   EG10408   
CRUT413404 RMAG_0504RMAG_0506RMAG_0800RMAG_0631RMAG_0507RMAG_0632
SPNE170187 SPN08034SPN08032SPN08035SPN02008SPN06049SPN07066
SPNE487213 SPT_0214SPT_0212SPT_0215SPT_1651SPT_0468SPT_1076
SPNE1313 SPJ_0194SPJ_0192SPJ_0195SPJ_1608SPJ_0417SPJ_0963
SPNE171101 SPR0163SPR0161SPR0164SPR1557SPR0390SPR0928
SPNE488221 SP70585_0240SP70585_0238SP70585_0241SP70585_1752SP70585_0502SP70585_1063


Organism features enriched in list (features available for 5 out of the 6 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0024868492
Disease:Conjunctivitis 0.008576311
Disease:Pneumonia 0.0000649312
GC_Content_Range4:0-40 0.00631675213
GC_Content_Range7:30-40 0.00179175166
Optimal_temp.:30-35 0.001206127
Shape:Coccus 0.0015884482



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181760.5028
GLYCOCAT-PWY (glycogen degradation I)2461850.4640
PWY-5386 (methylglyoxal degradation I)3052110.4443
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162560.4260
PWY-5918 (heme biosynthesis I)2721910.4178
AST-PWY (arginine degradation II (AST pathway))1201070.4173
PWY-5194 (siroheme biosynthesis)3122100.4168
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002040.4145
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861960.4060
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951490.4041
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911980.4034
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901970.4000



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11322   EG11321   EG11320   EG10666   EG10408   
EG114060.9998180.9998760.9994650.9994780.998655
EG113220.9998740.9995530.9999210.998791
EG113210.9998950.9997360.999502
EG113200.999710.999703
EG106660.999228
EG10408



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PAIRWISE BLAST SCORES:

  EG11406   EG11322   EG11321   EG11320   EG10666   EG10408   
EG114060.0f0-----
EG11322-0.0f0----
EG11321--0.0f0---
EG11320---0.0f0--
EG10666----0.0f0-
EG10408-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- RIBOSYN2-PWY (flavin biosynthesis I (bacteria and plants)) (degree of match pw to cand: 0.500, degree of match cand to pw: 0.500, average score: 0.959)
  Genes in pathway or complex:
             0.8588 0.5360 EG11079 (ribF) RIBF-MONOMER (bifunctional riboflavin kinase / FMN adenylyltransferase)
   *in cand* 0.9995 0.9987 EG11406 (ribC) RIBOFLAVIN-SYN-MONOMER (RibC)
   *in cand* 0.9997 0.9988 EG11322 (ribE) LUMAZINESYN-MONOMER (RibE)
             0.9993 0.9981 EG10465 (ribB) DIOHBUTANONEPSYN-MONOMER (3,4-dihydroxy-2-butanone 4-phosphate synthase)
   *in cand* 0.9998 0.9995 EG11321 (ribD) RIBOFLAVINSYNDEAM-MONOMER (fused diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase)
             0.9916 0.9563 EG11331 (ribA) GTP-CYCLOHYDRO-II-MONOMER (GTP cyclohydrolase II)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9987 EG10408 (glyA) GLYOHMETRANS-MONOMER (GlyA)
   *in cand* 0.9997 0.9992 EG10666 (nusB) EG10666-MONOMER (transcription antitermination protein NusB)
   *in cand* 0.9997 0.9995 EG11320 (nrdR) EG11320-MONOMER (NrdR)
   This pathway has holes



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10666 EG11320 EG11321 EG11322 (centered at EG11322)
EG10408 (centered at EG10408)
EG11406 (centered at EG11406)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11406   EG11322   EG11321   EG11320   EG10666   EG10408   
392/623402/623399/623422/623415/623382/623
AAEO224324:0:Tyes111205--252
AAUR290340:2:Tyes9596940--
AAVE397945:0:Tyes2455112987520751
ABAC204669:0:Tyes-021382851150
ABAU360910:0:Tyes-02395239812399
ABOR393595:0:Tyes314506
ABUT367737:0:Tyes-1191--11920
ACAU438753:0:Tyes--21-0
ACEL351607:0:Tyes0-1204--
ACRY349163:8:Tyes0-12-3
ADEH290397:0:Tyes314506
AEHR187272:0:Tyes352160
AFER243159:0:Tyes314506
AHYD196024:0:Tyes011781182118311771185
ALAI441768:0:Tyes--1050--0
AMAR234826:0:Tyes--038--
AMAR329726:9:Tyes-028163517-919
AMET293826:0:Tyes1301806-1305
ANAE240017:0:Tyes78-790--
AORE350688:0:Tyes---0222306
APHA212042:0:Tyes--0---
APLE416269:0:Tyes184186183510010
APLE434271:0:Tno193195192479010
ASAL382245:5:Tyes116474380
ASP1667:3:Tyes9598-0--
ASP232721:2:Tyes237210771483010781
ASP62928:0:Tyes312533253202531
ASP62977:0:Tyes330831030841883
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