CANDIDATE ID: 440

CANDIDATE ID: 440

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9945233e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    5.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG11849 (yihW) (b3884)
   Products of gene:
     - EG11849-MONOMER (predicted DNA-binding transcriptional regulator)

- EG10400 (glpR) (b3423)
   Products of gene:
     - PD03576 (GlpR transcriptional repressor)
       Regulatees:
        TU00173 (glpFKX)
        TU00216 (glpTQ)
        TU00031 (glpD)
        TU00030 (glpABC)
     - CPLX0-8057 (GlpR-glycerol)
     - MONOMER-54 (GlpR-glycerol-3-phosphate)

- EG10398 (glpK) (b3926)
   Products of gene:
     - GLYCEROL-KIN-MONOMER (GlpK)
     - GLYCEROL-KIN-CPLX (glycerol kinase)
       Reactions:
        glycerol + ATP  ->  sn-glycerol-3-phosphate + ADP + 2 H+
         In pathways
         PWY0-381 (glycerol degradation I)
         PWY-4261 (PWY-4261)

- EG10396 (glpF) (b3927)
   Products of gene:
     - GLPF-MONOMER (GlpF)
     - CPLX0-7654 (GlpF glycerol MIP channel)
       Reactions:
        glycerol[periplasmic space]  =  glycerol[cytosol]

- EG10394 (glpD) (b3426)
   Products of gene:
     - AERGLYC3PDEHYDROG-MONOMER (GlpD)
     - AERGLYC3PDEHYDROG-CPLX (glycerol 3-phosphate dehydrogenase, aerobic)
       Reactions:
        sn-glycerol-3-phosphate + a ubiquinone  ->  dihydroxyacetone phosphate + a ubiquinol
        sn-glycerol-3-phosphate + ubiquinone-8  =  ubiquinol-8 + dihydroxyacetone phosphate
         In pathways
         PWY0-381 (glycerol degradation I)

- EG10391 (glpA) (b2241)
   Products of gene:
     - ANGLYC3PDEHYDROGSUBUNITA-MONOMER (glycerol-3-phosphate dehydrogenase (anaerobic), large subunit)
     - ANGLYC3PDEHYDROG-CPLX (glycerol-3-phosphate-dehydrogenase, anaerobic)
       Reactions:
        a quinone + sn-glycerol-3-phosphate  ->  dihydroxyacetone phosphate + a quinol
         In pathways
         PWY-6118 (PWY-6118)
         PWY-4261 (PWY-4261)
        sn-glycerol-3-phosphate + ubiquinone-8  =  ubiquinol-8 + dihydroxyacetone phosphate
         In pathways
         PWY0-381 (glycerol degradation I)



Back to top



ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 201
Effective number of orgs (counting one per cluster within 468 clusters): 124

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola6
YPES214092 ncbi Yersinia pestis CO925
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XCAM487884 Xanthomonas campestris pv. paulliniae6
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-106
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80046
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339136
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3066
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1146
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169615
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
STHE292459 ncbi Symbiobacterium thermophilum IAM 148635
SSP644076 Silicibacter sp. TrichCH4B5
SSP292414 ncbi Ruegeria sp. TM10405
SSON300269 ncbi Shigella sonnei Ss0466
SPYO370554 ncbi Streptococcus pyogenes MGAS107505
SPYO370553 ncbi Streptococcus pyogenes MGAS20965
SPYO370552 ncbi Streptococcus pyogenes MGAS102705
SPYO370551 ncbi Streptococcus pyogenes MGAS94295
SPYO319701 ncbi Streptococcus pyogenes MGAS61805
SPYO293653 ncbi Streptococcus pyogenes MGAS50055
SPYO198466 ncbi Streptococcus pyogenes MGAS3155
SPYO193567 ncbi Streptococcus pyogenes SSI-15
SPYO186103 ncbi Streptococcus pyogenes MGAS82325
SPYO160490 ncbi Streptococcus pyogenes M1 GAS5
SPRO399741 ncbi Serratia proteamaculans 5686
SMEL266834 ncbi Sinorhizobium meliloti 10216
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLAC55218 Ruegeria lacuscaerulensis5
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23385
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122285
SEPI176279 ncbi Staphylococcus epidermidis RP62A5
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SCO ncbi Streptomyces coelicolor A3(2)6
SBOY300268 ncbi Shigella boydii Sb2276
SAVE227882 ncbi Streptomyces avermitilis MA-46806
SAUR93062 ncbi Staphylococcus aureus aureus COL5
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83255
SAUR418127 ncbi Staphylococcus aureus aureus Mu35
SAUR367830 Staphylococcus aureus aureus USA3005
SAUR359787 ncbi Staphylococcus aureus aureus JH15
SAUR359786 ncbi Staphylococcus aureus aureus JH95
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4765
SAUR273036 ncbi Staphylococcus aureus RF1225
SAUR196620 ncbi Staphylococcus aureus aureus MW25
SAUR158879 ncbi Staphylococcus aureus aureus N3155
SAUR158878 ncbi Staphylococcus aureus aureus Mu505
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RSAL288705 ncbi Renibacterium salmoninarum ATCC 332095
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111705
RPOM246200 ncbi Ruegeria pomeroyi DSS-35
RPAL316057 ncbi Rhodopseudomonas palustris BisB56
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL316055 ncbi Rhodopseudomonas palustris BisA535
RPAL258594 ncbi Rhodopseudomonas palustris CGA0096
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38415
RFER338969 ncbi Rhodoferax ferrireducens T1185
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
RETL347834 ncbi Rhizobium etli CFN 425
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP296591 ncbi Polaromonas sp. JS6665
PSP117 Pirellula sp.5
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PPRO298386 ncbi Photobacterium profundum SS96
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PMEN399739 ncbi Pseudomonas mendocina ymp5
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
OANT439375 ncbi Ochrobactrum anthropi ATCC 491886
NFAR247156 ncbi Nocardia farcinica IFM 101525
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP409 Methylobacterium sp.5
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC15
MSP189918 ncbi Mycobacterium sp. KMS5
MSP164757 ncbi Mycobacterium sp. JLS5
MSP164756 ncbi Mycobacterium sp. MCS5
MSME246196 ncbi Mycobacterium smegmatis MC2 1556
MLOT266835 ncbi Mesorhizobium loti MAFF3030996
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK5
MEXT419610 ncbi Methylobacterium extorquens PA15
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53345
LSPH444177 ncbi Lysinibacillus sphaericus C3-415
LPLA220668 ncbi Lactobacillus plantarum WCFS15
LMON265669 ncbi Listeria monocytogenes 4b F23655
LMON169963 ncbi Listeria monocytogenes EGD-e5
LLAC272622 ncbi Lactococcus lactis cremoris SK115
LINN272626 ncbi Listeria innocua Clip112625
LCHO395495 ncbi Leptothrix cholodnii SP-65
KRAD266940 ncbi Kineococcus radiotolerans SRS302166
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP290400 ncbi Jannaschia sp. CCS15
HMUK485914 ncbi Halomicrobium mukohataei DSM 122865
HMOD498761 ncbi Heliobacterium modesticaldum Ice15
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HCHE349521 ncbi Hahella chejuensis KCTC 23965
GOXY290633 ncbi Gluconobacter oxydans 621H6
ESP42895 Enterobacter sp.6
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G206
CVIO243365 ncbi Chromobacterium violaceum ATCC 124726
CSP501479 Citreicella sp. SE456
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CNOV386415 ncbi Clostridium novyi NT5
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131295
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6575
CBOT498213 ncbi Clostridium botulinum B1 str. Okra5
CBOT441772 ncbi Clostridium botulinum F str. Langeland5
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTHA271848 ncbi Burkholderia thailandensis E2646
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13305
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.6
BPSE320373 ncbi Burkholderia pseudomallei 6686
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962436
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128226
BOVI236 Brucella ovis5
BMAL320389 ncbi Burkholderia mallei NCTC 102476
BMAL320388 ncbi Burkholderia mallei SAVP16
BMAL243160 ncbi Burkholderia mallei ATCC 233446
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BHAL272558 ncbi Bacillus halodurans C-1256
BCLA66692 ncbi Bacillus clausii KSM-K166
BCEN331272 ncbi Burkholderia cenocepacia HI24246
BCEN331271 ncbi Burkholderia cenocepacia AU 10546
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB506
BANT592021 ncbi Bacillus anthracis A02485
BANT261594 ncbi Bacillus anthracis Ames Ancestor5
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
ANAE240017 Actinomyces oris MG16
AHYD196024 Aeromonas hydrophila dhakensis6
ACRY349163 ncbi Acidiphilium cryptum JF-55
ACAU438753 ncbi Azorhizobium caulinodans ORS 5716
ABAU360910 ncbi Bordetella avium 197N5
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455
AAVE397945 ncbi Acidovorax citrulli AAC00-15
AAUR290340 ncbi Arthrobacter aurescens TC16


Names of the homologs of the genes in the group in each of these orgs
  EG11849   EG10400   EG10398   EG10396   EG10394   EG10391   
YPSE349747 YPSIP31758_3997YPSIP31758_3997YPSIP31758_0101YPSIP31758_0102YPSIP31758_4000YPSIP31758_0227
YPSE273123 YPTB3779YPTB3779YPTB0086YPTB0087YPTB3782YPTB0209
YPES386656 YPDSF_0048YPDSF_0048YPDSF_3813YPDSF_3812YPDSF_3302YPDSF_3443
YPES377628 YPN_3948YPN_3948YPN_3758YPN_3757YPN_3585YPN_0138
YPES360102 YPA_3349YPA_3349YPA_3451YPA_3450YPA_3766YPA_0196
YPES349746 YPANGOLA_A3757YPANGOLA_A3757YPANGOLA_A0100YPANGOLA_A0101YPANGOLA_A4123YPANGOLA_A4123
YPES214092 YPO0120YPO0120YPO0091YPO3937YPO3826
YPES187410 Y3897Y3897Y0047Y0046Y3891Y0404
YENT393305 YE3987YE3987YE0099YE0100YE4008YE0212
XCAM487884 XCC-B100_0387XCC-B100_0387XCC-B100_0384XCC-B100_0385XCC-B100_0386XCC-B100_0386
XCAM316273 XCAORF_4154XCAORF_4154XCAORF_4157XCAORF_4156XCAORF_4155XCAORF_4155
XCAM314565 XC_0373XC_0373XC_0370XC_0371XC_0372XC_0372
XCAM190485 XCC0361XCC0361XCC0358XCC0359XCC0360XCC0360
XAXO190486 XAC0361XAC0361XAC0358XAC0359XAC0360XAC0360
VVUL216895 VV1_1786VV1_1786VV1_1787VV1_1788VV1_1785VV2_0010
VVUL196600 VV2625VV2625VV2624VV2623VV2626VVA0519
VPAR223926 VP2387VP2387VP2386VP2385VP2388
VFIS312309 VFA0238VFA0238VFA0236VFA0235VFA0239VFA0250
VCHO345073 VC0395_0299VC0395_0299VC0395_0682VC0395_0683VC0395_0601VC0395_0686
VCHO VCA0940VCA0940VCA0744VCA0657VCA0747
STYP99287 STM4025STM3523STM4086STM4087STM3526STM2284
STHE292459 STH2298STH2298STH1195STH427STH1986
SSP644076 SCH4B_1467SCH4B_1467SCH4B_4505SCH4B_1466SCH4B_1466
SSP292414 TM1040_2205TM1040_2205TM1040_3440TM1040_2206TM1040_2206
SSON300269 SSO_4045SSO_3660SSO_4095SSO_4096SSO_3663SSO_2302
SPYO370554 MGAS10750_SPY1736MGAS10750_SPY1736MGAS10750_SPY1492MGAS10750_SPY1632MGAS10750_SPY1491
SPYO370553 MGAS2096_SPY1664MGAS2096_SPY1664MGAS2096_SPY1404MGAS2096_SPY1598MGAS2096_SPY1403
SPYO370552 MGAS10270_SPY1708MGAS10270_SPY1708MGAS10270_SPY1499MGAS10270_SPY1640MGAS10270_SPY1498
SPYO370551 MGAS9429_SPY1642MGAS9429_SPY1642MGAS9429_SPY1379MGAS9429_SPY1578MGAS9429_SPY1378
SPYO319701 M28_SPY1629M28_SPY1629M28_SPY1424M28_SPY1561M28_SPY1423
SPYO293653 M5005_SPY1639M5005_SPY1639M5005_SPY1381M5005_SPY1573M5005_SPY1380
SPYO198466 SPYM3_1660SPYM3_1660SPYM3_1468SPYM3_1600SPYM3_1467
SPYO193567 SPS1658SPS1658SPS0398SPS0267SPS0399
SPYO186103 SPYM18_1993SPYM18_1993SPYM18_1696SPYM18_1917SPYM18_1695
SPYO160490 SPY1924SPY1924SPY1684SPY1854SPY1683
SPRO399741 SPRO_4640SPRO_4640SPRO_4798SPRO_4797SPRO_4642SPRO_0200
SMEL266834 SMC02521SMC02521SMB21009SMA0627SMC01620SMC01620
SMED366394 SMED_2902SMED_2902SMED_4501SMED_2156SMED_2156
SLAC55218 SL1157_3160SL1157_3160SL1157_1237SL1157_3159SL1157_3159
SHIGELLA YIHWGLPRGLPKGLPFGLPDGLPA
SGLO343509 SG2326SG2326SG2172SG1858SG2329SG2329
SFLE373384 SFV_3615SFV_3430SFV_3997SFV_3998SFV_3433SFV_2313
SFLE198214 AAN45391.1AAN44905.1AAN45437.1AAN45438.1AAN44908.1AAN43838.1
SERY405948 SACE_3462SACE_6518SACE_4274SACE_6515SACE_3958
SEPI176280 SE_1788SE_1788SE_0978SE_0977SE_0979
SEPI176279 SERP1796SERP1796SERP0867SERP0866SERP0868
SENT454169 SEHA_C4349SEHA_C3831SEHA_C4417SEHA_C4418SEHA_C3834SEHA_C2524
SENT321314 SCH_3915SCH_3454SCH_3975SCH_3976SCH_3457SCH_2287
SENT295319 SPA3866SPA3381SPA3929SPA3930SPA3384SPA0580
SENT220341 STY3853STY4280STY3784STY3783STY4277STY2513
SENT209261 T3596T3990T3532T3531T3987T0580
SDYS300267 SDY_3652SDY_3652SDY_3818SDY_3817SDY_3649SDY_2436
SCO SCO4920SCO1043SCO1660SCO4057SCO4774SCO4774
SBOY300268 SBO_3885SBO_3411SBO_3943SBO_3944SBO_3414SBO_2053
SAVE227882 SAV3339SAV1447SAV6963SAV7200SAV5003SAV5003
SAUR93062 SACOL2188SACOL1320SACOL1319SACOL1321SACOL1321
SAUR93061 SAOUHSC_02456SAOUHSC_01276SAOUHSC_01275SAOUHSC_01278SAOUHSC_01278
SAUR418127 SAHV_2180SAHV_1290SAHV_1289SAHV_1291SAHV_1291
SAUR367830 SAUSA300_2156SAUSA300_1192SAUSA300_1191SAUSA300_1193SAUSA300_1193
SAUR359787 SAURJH1_2266SAURJH1_1385SAURJH1_1384SAURJH1_1386SAURJH1_1386
SAUR359786 SAURJH9_2227SAURJH9_1359SAURJH9_1358SAURJH9_1360SAURJH9_1360
SAUR282459 SAS2097SAS1233SAS1232SAS1234SAS1234
SAUR273036 SAB2077CSAB1161SAB1160SAB1162SAB1162
SAUR196620 MW2122MW1183MW1182MW1184MW1184
SAUR158879 SA1998SA1141SA1140SA1142SA1142
SAUR158878 SAV2196SAV1301SAV1300SAV1302SAV1302
RSOL267608 RSC3044RSC3044RSC3052RSC3045RSC3045
RSAL288705 RSAL33209_3140RSAL33209_1948RSAL33209_1949RSAL33209_1950RSAL33209_1950
RRUB269796 RRU_A3010RRU_A1265RRU_A2009RRU_A1508RRU_A1508
RPOM246200 SPO_0731SPO_0731SPO_0104SPO_0732SPO_0732
RPAL316057 RPD_4070RPD_4070RPD_3544RPD_2467RPD_4069RPD_1035
RPAL316056 RPC_1360RPC_1360RPC_2231RPC_1361RPC_1361
RPAL316055 RPE_1377RPE_1377RPE_3774RPE_1378RPE_1378
RPAL258594 RPA4411RPA4411RPA3705RPA2485RPA4410RPA4410
RMET266264 RMET_2235RMET_2235RMET_2238RMET_2239RMET_5444
RLEG216596 PRL90073PRL90073PRL90081PRL90074PRL90074
RFER338969 RFER_3677RFER_3677RFER_3678RFER_2333RFER_2333
REUT381666 H16_A2504H16_A2504H16_A2507H16_A2508H16_A2508
REUT264198 REUT_A2210REUT_A2210REUT_A2213REUT_A2214REUT_A2214
RETL347834 RHE_PB00018RHE_PB00018RHE_PB00026RHE_PB00019RHE_PB00019
PSYR223283 PSPTO_4169PSPTO_4169PSPTO_4168PSPTO_4167PSPTO_4170PSPTO_4170
PSYR205918 PSYR_3906PSYR_3906PSYR_3905PSYR_3904PSYR_3907PSYR_3907
PSTU379731 PST_1602PST_1602PST_1603PST_1604PST_2849PST_1601
PSP296591 BPRO_0477BPRO_0477BPRO_0476BPRO_0484BPRO_0484
PSP117 RB2590RB3762RB8872RB3763RB3763
PPUT76869 PPUTGB1_4338PPUTGB1_4338PPUTGB1_4337PPUTGB1_4336PPUTGB1_4339PPUTGB1_4339
PPUT351746 PPUT_1115PPUT_1115PPUT_1116PPUT_1117PPUT_1114PPUT_1114
PPUT160488 PP_1074PP_1074PP_1075PP_1076PP_1073PP_1073
PPRO298386 PBPRA0159PBPRA0159PBPRA0248PBPRA0249PBPRA0160PBPRA1372
PMUL272843 PM1439PM1439PM1446PM1445PM1442
PMEN399739 PMEN_3347PMEN_3347PMEN_3345PMEN_3348PMEN_1559
PLUM243265 PLU0195PLU0195PLU4768PLU4767PLU0194PLU0194
PING357804 PING_3176PING_3176PING_3168PING_3166PING_3232
PHAL326442 PSHAB0550PSHAB0550PSHAB0551PSHAB0552PSHAA0189PSHAA0189
PFLU220664 PFL_4869PFL_4869PFL_4868PFL_4867PFL_4870PFL_2768
PFLU216595 PFLU1141PFLU1141PFLU1142PFLU1143PFLU1140
PFLU205922 PFL_4533PFL_4533PFL_4532PFL_4531PFL_4534PFL_4534
PENT384676 PSEEN1196PSEEN1196PSEEN1197PSEEN1198PSEEN1195PSEEN1195
PAER208964 PA3583PA3583PA3582PA3581PA3584PA3025
PAER208963 PA14_17940PA14_17940PA14_18010PA14_17980PA14_17930PA14_17930
OANT439375 OANT_0268OANT_0268OANT_1086OANT_0981OANT_2910OANT_2461
NFAR247156 NFA28560NFA28560NFA9710NFA9720NFA9720
MSUC221988 MS2186MS2186MS1988MS1990MS1993
MSP409 M446_4660M446_4660M446_1966M446_1194M446_1975
MSP400668 MMWYL1_3954MMWYL1_3954MMWYL1_3953MMWYL1_3955MMWYL1_3955
MSP266779 MESO_1590MESO_1590MESO_1598MESO_1591MESO_1591
MSP189918 MKMS_0091MKMS_0091MKMS_4962MKMS_1267MKMS_1267
MSP164757 MJLS_0072MJLS_0072MJLS_5241MJLS_1277MJLS_1277
MSP164756 MMCS_0082MMCS_0082MMCS_4873MMCS_1250MMCS_1250
MSME246196 MSMEG_0087MSMEG_0509MSMEG_6229MSMEG_6758MSMEG_6761MSMEG_1736
MLOT266835 MLL0711MLL0711MLL0700MLL6943MLR7270MLL0710
MGIL350054 MFLV_0750MFLV_0750MFLV_1327MFLV_4821MFLV_4821
MEXT419610 MEXT_1363MEXT_1363MEXT_4066MEXT_4792MEXT_4792
LWEL386043 LWE0564LWE2315LWE1551LWE1552LWE1308
LSPH444177 BSPH_1649BSPH_1657BSPH_0241BSPH_0239BSPH_1658
LPLA220668 LP_3549LP_3549LP_0834LP_3436LP_0371
LMON265669 LMOF2365_0372LMOF2365_2337LMOF2365_1557LMOF2365_1558LMOF2365_1310
LMON169963 LMO0352LMO2366LMO1538LMO1539LMO1293
LLAC272622 LACR_1427LACR_1485LACR_1487LACR_1486LACR_1486
LINN272626 LIN0370LIN2465LIN1573LIN1574LIN1331
LCHO395495 LCHO_3222LCHO_3222LCHO_3223LCHO_3221LCHO_3221
KRAD266940 KRAD_3971KRAD_1535KRAD_1008KRAD_1007KRAD_1009KRAD_1009
KPNE272620 GKPORF_B3132GKPORF_B3132GKPORF_B3372GKPORF_B3371GKPORF_B3135GKPORF_B1950
JSP290400 JANN_2071JANN_2071JANN_3683JANN_3684JANN_3684
HMUK485914 HMUK_2660HMUK_2660HMUK_2514HMUK_2513HMUK_2516
HMOD498761 HM1_2674HM1_2674HM1_1596HM1_1595HM1_1597
HINF71421 HI_0619HI_0619HI_0691HI_0690HI_0685
HINF281310 NTHI0876NTHI0876NTHI0813NTHI0812NTHI0808
HCHE349521 HCH_06963HCH_06963HCH_06965HCH_06964HCH_04624
GOXY290633 GOX2087GOX2087GOX2090GOX2089GOX2088GOX2215
ESP42895 ENT638_3832ENT638_3832ENT638_4047ENT638_4046ENT638_3835ENT638_2805
EFER585054 EFER_3391EFER_3391EFER_3847EFER_3846EFER_3394EFER_0925
ECOO157 YIHWGLPRGLPKGLPFGLPDGLPA
ECOL83334 ECS4807ECS4266ECS4851ECS4852ECS4269ECS3126
ECOL585397 ECED1_4584ECED1_4083ECED1_4628ECED1_4629ECED1_4086ECED1_2706
ECOL585057 ECIAI39_3116ECIAI39_3903ECIAI39_3070ECIAI39_3069ECIAI39_3906ECIAI39_2384
ECOL585056 ECUMN_4411ECUMN_3881ECUMN_4454ECUMN_4455ECUMN_3884ECUMN_2581
ECOL585055 EC55989_4351EC55989_3830EC55989_4404EC55989_4405EC55989_3833EC55989_2490
ECOL585035 ECS88_4322ECS88_3812ECS88_4376ECS88_4377ECS88_3815ECS88_2388
ECOL585034 ECIAI1_4084ECIAI1_3566ECIAI1_4131ECIAI1_4132ECIAI1_3569ECIAI1_2319
ECOL481805 ECOLC_4141ECOLC_0291ECOLC_4092ECOLC_4091ECOLC_0288ECOLC_1410
ECOL469008 ECBD_4143ECBD_0319ECBD_4098ECBD_4097ECBD_0316ECBD_1419
ECOL439855 ECSMS35_4269ECSMS35_3702ECSMS35_4366ECSMS35_4367ECSMS35_3706ECSMS35_2393
ECOL413997 ECB_03769ECB_03274ECB_03811ECB_03812ECB_03277ECB_02167
ECOL409438 ECSE_4167ECSE_3689ECSE_4215ECSE_4216ECSE_3692ECSE_2503
ECOL405955 APECO1_2590APECO1_3044APECO1_2543APECO1_2542APECO1_3041APECO1_4320
ECOL364106 UTI89_C4461UTI89_C3923UTI89_C4510UTI89_C4511UTI89_C3926UTI89_C2521
ECOL362663 ECP_4086ECP_3508ECP_4135ECP_4136ECP_3511ECP_2283
ECOL331111 ECE24377A_4407ECE24377A_3898ECE24377A_4460ECE24377A_4461ECE24377A_3902ECE24377A_2539
ECOL316407 ECK3877:JW5567:B3884ECK3409:JW3386:B3423ECK3918:JW3897:B3926ECK3919:JW3898:B3927ECK3412:JW3389:B3426ECK2233:JW2235:B2241
ECOL199310 C4824C4200C4878C4879C4203C2782
ECAR218491 ECA4137ECA4137ECA4267ECA4266ECA4141ECA4165
DDES207559 DDE_3731DDE_3731DDE_0410DDE_0409DDE_3733DDE_0408
CVIO243365 CV_0112CV_0112CV_0251CV_0252CV_0254CV_0254
CSP501479 CSE45_3080CSE45_3080CSE45_4239CSE45_4221CSE45_3081CSE45_4240
CSAL290398 CSAL_2105CSAL_2105CSAL_2104CSAL_2106CSAL_2106
CNOV386415 NT01CX_0637NT01CX_0637NT01CX_0608NT01CX_0609NT01CX_0612
CDIP257309 DIP1427DIP2235DIP2236DIP2237DIP2237
CBOT515621 CLJ_B2418CLJ_B1726CLJ_B3012CLJ_B3013CLJ_B2456
CBOT498213 CLD_2367CLD_2939CLD_1789CLD_1788CLD_2331
CBOT441772 CLI_2257CLI_1695CLI_2834CLI_2835CLI_2294
BVIE269482 BCEP1808_2786BCEP1808_2786BCEP1808_2790BCEP1808_2791BCEP1808_2789BCEP1808_2789
BTHA271848 BTH_I0603BTH_I0603BTH_I0599BTH_I0598BTH_I0600BTH_I0600
BSUI470137 BSUIS_A0200BSUIS_A0200BSUIS_B0444BSUIS_B0858BSUIS_B0858
BSUI204722 BR_0199BR_0199BR_A0443BR_A0865BR_A0865
BSP376 BRADO1907BRADO1907BRADO0987BRADO4792BRADO4792
BSP36773 BCEP18194_A6002BCEP18194_A6002BCEP18194_A6006BCEP18194_A6007BCEP18194_A6005BCEP18194_B2081
BPSE320373 BURPS668_0729BURPS668_0729BURPS668_0725BURPS668_0724BURPS668_0726BURPS668_0726
BPSE320372 BURPS1710B_A0955BURPS1710B_A0955BURPS1710B_A0951BURPS1710B_A0950BURPS1710B_A0952BURPS1710B_A0952
BPSE272560 BPSL0691BPSL0691BPSL0687BPSL0686BPSL0688BPSL0688
BPER257313 BP2643BP2643BP3825BP2644BP2644
BPAR257311 BPP3096BPP3096BPP3969BPP1958BPP3097BPP3097
BOVI236 GBOORF0201GBOORF0201GBOORFA0432GBOORFA0894GBOORFA0894
BMAL320389 BMA10247_2456BMA10247_2456BMA10247_2452BMA10247_2451BMA10247_2453BMA10247_2453
BMAL320388 BMASAVP1_A2702BMASAVP1_A2702BMASAVP1_A2706BMASAVP1_A2707BMASAVP1_A2705BMASAVP1_A2705
BMAL243160 BMA_0244BMA_0244BMA_0240BMA_0239BMA_0241BMA_0241
BLIC279010 BL02485BL02903BL05089BL02902BL02902
BJAP224911 BLR2433BLR2433BLR1410BLR2436BLR2436
BHAL272558 BH1553BH0801BH1093BH1092BH1095BH1095
BCLA66692 ABC3573ABC0421ABC3384ABC3383ABC1257ABC1257
BCEN331272 BCEN2424_2674BCEN2424_2674BCEN2424_2678BCEN2424_2679BCEN2424_2677BCEN2424_2677
BCEN331271 BCEN_2063BCEN_2063BCEN_2067BCEN_2068BCEN_2066BCEN_2066
BCAN483179 BCAN_A0203BCAN_A0203BCAN_B0445BCAN_B0883BCAN_B0883
BBRO257310 BB3059BB3059BB4442BB2145BB3060BB3060
BANT592021 BAA_1410BAA_1120BAA_1119BAA_1121BAA_1121
BANT261594 GBAA1343GBAA1026GBAA1025GBAA1027GBAA1027
BAMY326423 RBAM_012190RBAM_033520RBAM_009550RBAM_009540RBAM_009560
BAMB398577 BAMMC406_2599BAMMC406_2599BAMMC406_2603BAMMC406_2604BAMMC406_2602BAMMC406_2602
BAMB339670 BAMB_2727BAMB_2727BAMB_2731BAMB_2732BAMB_2730BAMB_2730
ASP232721 AJS_0383AJS_0383AJS_0382AJS_0390AJS_0390
ASAL382245 ASA_2707ASA_2707ASA_2710ASA_2709ASA_2706ASA_2318
APLE434271 APJL_0830APJL_0830APJL_0393APJL_0392APJL_0398
APLE416269 APL_0823APL_0823APL_0375APL_0374APL_0379
ANAE240017 ANA_2655ANA_2655ANA_2782ANA_2784ANA_2785ANA_2785
AHYD196024 AHA_1651AHA_1651AHA_1648AHA_1649AHA_1652AHA_2460
ACRY349163 ACRY_1769ACRY_1769ACRY_2384ACRY_2574ACRY_2574
ACAU438753 AZC_2090AZC_2738AZC_2710AZC_2711AZC_2709AZC_2709
ABAU360910 BAV2010BAV2010BAV3052BAV2011BAV2011
ABAC204669 ACID345_0659ACID345_0659ACID345_2987ACID345_2986ACID345_3314
AAVE397945 AAVE_0603AAVE_0603AAVE_0602AAVE_0610AAVE_0610
AAUR290340 AAUR_3354AAUR_3354AAUR_2247AAUR_2248AAUR_2861AAUR_2861


Organism features enriched in list (features available for 187 out of the 201 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.00015681317
Arrangment:Pairs 0.000163452112
Disease:Bubonic_plague 0.001030566
Disease:Dysentery 0.001030566
Disease:Gastroenteritis 0.00091851013
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00007411011
Disease:Wide_range_of_infections 0.00007411011
GC_Content_Range4:0-40 1.862e-937213
GC_Content_Range4:60-100 5.702e-873145
GC_Content_Range7:0-30 0.0000690447
GC_Content_Range7:30-40 0.000020433166
GC_Content_Range7:50-60 0.000786348107
GC_Content_Range7:60-70 1.399e-768134
Genome_Size_Range5:0-2 2.149e-1612155
Genome_Size_Range5:2-4 6.655e-738197
Genome_Size_Range5:4-6 5.196e-16102184
Genome_Size_Range5:6-10 4.981e-103547
Genome_Size_Range9:1-2 1.611e-1112128
Genome_Size_Range9:2-3 0.000204223120
Genome_Size_Range9:3-4 0.00368741577
Genome_Size_Range9:4-5 5.102e-75296
Genome_Size_Range9:5-6 1.165e-75088
Genome_Size_Range9:6-8 9.271e-103038
Gram_Stain:Gram_Neg 0.0005999124333
Habitat:Aquatic 5.510e-61291
Habitat:Multiple 0.000027978178
Habitat:Specialized 0.0000469553
Motility:Yes 0.0000262108267
Optimal_temp.:25-30 2.014e-71719
Optimal_temp.:30-37 0.00006201418
Oxygen_Req:Anaerobic 2.474e-108102
Oxygen_Req:Facultative 5.407e-14105201
Pathogenic_in:Human 0.000013691213
Pathogenic_in:No 0.000762956226
Shape:Rod 2.936e-9143347
Shape:Sphere 0.0052461119
Shape:Spiral 0.0000211134
Temp._range:Mesophilic 2.621e-6171473
Temp._range:Thermophilic 0.0001253235



Back to top



ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 209
Effective number of orgs (counting one per cluster within 468 clusters): 185

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM40
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A0
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110180
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103310
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS11
TTUR377629 ncbi Teredinibacter turnerae T79010
TTHE262724 ncbi Thermus thermophilus HB270
TPEN368408 ncbi Thermofilum pendens Hrk 51
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TERY203124 ncbi Trichodesmium erythraeum IMS1011
TELO197221 ncbi Thermosynechococcus elongatus BP-10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12510
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252590
TDEN243275 ncbi Treponema denticola ATCC 354051
TCRU317025 ncbi Thiomicrospira crunogena XCL-20
TACI273075 ncbi Thermoplasma acidophilum DSM 17281
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSP84588 ncbi Synechococcus sp. WH 81020
SSP387093 ncbi Sulfurovum sp. NBC37-10
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab0
SSP1148 ncbi Synechocystis sp. PCC 68031
SSP1131 Synechococcus sp. CC96050
SMUT210007 ncbi Streptococcus mutans UA1591
SMAR399550 ncbi Staphylothermus marinus F11
SELO269084 ncbi Synechococcus elongatus PCC 63010
SDEG203122 ncbi Saccharophagus degradans 2-401
SACI56780 ncbi Syntrophus aciditrophicus SB1
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal20
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RALB246199 Ruminococcus albus 81
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97901
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSP56811 Psychrobacter sp.0
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-10
PRUM264731 ncbi Prevotella ruminicola 230
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax0
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PLUT319225 ncbi Chlorobium luteolum DSM 2731
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PCRY335284 ncbi Psychrobacter cryohalolentis K51
PCAR338963 ncbi Pelobacter carbinolicus DSM 23800
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PARC259536 ncbi Psychrobacter arcticus 273-40
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE51
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSP387092 ncbi Nitratiruptor sp. SB155-20
NSP103690 ncbi Nostoc sp. PCC 71201
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NOCE323261 ncbi Nitrosococcus oceani ATCC 197071
NMUL323848 ncbi Nitrosospira multiformis ATCC 251960
NEUT335283 ncbi Nitrosomonas eutropha C911
NEUR228410 ncbi Nitrosomonas europaea ATCC 197181
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124441
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPNE272634 ncbi Mycoplasma pneumoniae M1291
MPEN272633 ncbi Mycoplasma penetrans HF-21
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR394221 ncbi Maricaulis maris MCS101
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MMAG342108 ncbi Magnetospirillum magneticum AMB-10
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2321
MHYO262722 ncbi Mycoplasma hyopneumoniae 74481
MHYO262719 ncbi Mycoplasma hyopneumoniae J1
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G371
MFLO265311 ncbi Mesoplasma florum L10
MFLA265072 ncbi Methylobacillus flagellatus KT0
MCAP243233 ncbi Methylococcus capsulatus Bath0
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8430
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HNEP81032 Hyphomonas neptunium0
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GURA351605 ncbi Geobacter uraniireducens Rf40
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH10
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
FMAG334413 ncbi Finegoldia magna ATCC 293281
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas0
ECAN269484 ncbi Ehrlichia canis Jake0
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DPSY177439 ncbi Desulfotalea psychrophila LSv540
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CTEP194439 ncbi Chlorobium tepidum TLS1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)0
CPSY167879 ncbi Colwellia psychrerythraea 34H0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CKLU431943 ncbi Clostridium kluyveri DSM 5550
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJAP155077 Cellvibrio japonicus1
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C0
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138261
CCHL340177 ncbi Chlorobium chlorochromatii CaD30
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CAULO ncbi Caulobacter crescentus CB150
CABO218497 ncbi Chlamydophila abortus S26/30
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)1
BQUI283165 ncbi Bartonella quintana Toulouse0
BLON206672 ncbi Bifidobacterium longum NCC27051
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCIC186490 Candidatus Baumannia cicadellinicola0
BBAC360095 ncbi Bartonella bacilliformis KC5830
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AVAR240292 ncbi Anabaena variabilis ATCC 294131
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232700
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-11
ABUT367737 ncbi Arcobacter butzleri RM40180
AAEO224324 ncbi Aquifex aeolicus VF51


Names of the homologs of the genes in the group in each of these orgs
  EG11849   EG10400   EG10398   EG10396   EG10394   EG10391   
ZMOB264203
XORY360094
XORY342109
XORY291331
WSUC273121
WPIP955
WPIP80849
UURE95667
UURE95664
UPAR505682
TWHI218496
TWHI203267
TVOL273116 TVN0840
TTUR377629
TTHE262724
TPEN368408 TPEN_1127
TPAL243276
TKOD69014 TK1396
TERY203124 TERY_3810
TELO197221
TDEN326298
TDEN292415
TDEN243275 TDE_1916
TCRU317025
TACI273075 TA0633
SWOL335541
STOK273063
STHE322159
STHE299768
STHE264199
SSP84588
SSP387093
SSP321332
SSP321327
SSP1148 SLL1085
SSP1131
SMUT210007 SMU_396
SMAR399550 SMAR_0264
SELO269084
SDEG203122 SDE_1482
SACI56780 SYN_02446
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFEL315456
RCON272944
RCAN293613
RBEL391896
RBEL336407
RALB246199 GRAORF_2157
RAKA293614
PTOR263820 PTO1486
PTHE370438
PSP56811
PSP312153
PRUM264731
PMOB403833 PMOB_0284
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540
PMAR167539
PMAR146891
PLUT319225 PLUT_1940
PISL384616
PINT246198
PHOR70601
PGIN242619
PCRY335284 PCRYO_0014
PCAR338963
PAST100379
PARS340102
PARC259536
PAER178306
PABY272844 PAB2406
OTSU357244
NSP387092
NSP103690 ALL1811
NSEN222891
NPHA348780
NOCE323261 NOC_2698
NMUL323848
NEUT335283 NEUT_1770
NEUR228410 NE0370
NARO279238 SARO_2442
MTHE349307
MTHE187420
MSYN262723
MSTA339860
MSED399549 MSED_1177
MPNE272634 MPN050
MPEN272633 MYPE6360
MMYC272632 MSC_0258
MMOB267748 MMOB2940
MMAZ192952
MMAR444158 MMARC6_1692
MMAR426368 MMARC7_0208
MMAR402880 MMARC5_0786
MMAR394221 MMAR10_2621
MMAR368407
MMAR267377
MMAG342108
MLAB410358
MKAN190192
MJAN243232
MHYO295358 MHP370
MHYO262722 MHP7448_0359
MHYO262719 MHJ_0355
MHUN323259
MGEN243273 MG_038
MFLO265311
MFLA265072
MCAP243233
MBUR259564
MBAR269797
MART243272
MAER449447
MAEO419665
MACE188937
LMES203120 LEUM_1392
LJOH257314 LJ_0700
LHEL405566 LHV_1671
LDEL390333 LDB0067
IHOS453591
HPYL85963
HPYL357544
HPY
HNEP81032
HHEP235279
HBUT415426
HACI382638
GURA351605
GFOR411154
GBET391165
FSUC59374
FNOD381764 FNOD_0697
FMAG334413 FMG_0150
ERUM302409
ERUM254945
ECHA205920
ECAN269484
DSP255470
DSP216389
DPSY177439
DETH243164
CVES412965
CTRA471473
CTRA471472
CTEP194439 CT_0185
CSUL444179
CRUT413404
CPSY167879
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992
CMUR243161
CMET456442 MBOO_0011
CMAQ397948 CMAQ_1799
CKOR374847
CKLU431943
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJAP155077 CJA_2421
CHOM360107
CFET360106
CFEL264202
CDES477974
CCUR360105
CCON360104 CCC13826_1636
CCHL340177
CCAV227941
CBLO291272
CBLO203907
CAULO
CABO218497
BTHE226186
BSP107806 BU306
BQUI283165
BLON206672 BL0410
BFRA295405
BFRA272559
BCIC186490
BBAC360095
BAPH372461
BAPH198804 BUSG296
AYEL322098
AVAR240292 AVA_4817
AURANTIMONAS
APHA212042
APER272557
AMAR234826
ALAI441768
AFUL224325
AFER243159
AEHR187272 MLG_1315
ABUT367737
AAEO224324 AQ_434


Organism features enriched in list (features available for 195 out of the 209 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Aggregates 0.000863289
Arrangment:Chains 0.00301522092
Arrangment:Pairs 3.418e-618112
Disease:Pharyngitis 0.000142188
Disease:bronchitis_and_pneumonitis 0.000142188
Endospores:Yes 5.401e-8253
GC_Content_Range4:0-40 3.202e-696213
GC_Content_Range4:60-100 8.904e-1217145
GC_Content_Range7:0-30 0.00180332547
GC_Content_Range7:30-40 0.000903671166
GC_Content_Range7:40-50 0.000974453117
GC_Content_Range7:60-70 6.005e-1017134
Genome_Size_Range5:0-2 5.932e-33113155
Genome_Size_Range5:4-6 3.292e-2016184
Genome_Size_Range5:6-10 0.0000323447
Genome_Size_Range9:0-1 1.861e-82327
Genome_Size_Range9:1-2 1.527e-2290128
Genome_Size_Range9:3-4 0.00178971577
Genome_Size_Range9:4-5 6.304e-11796
Genome_Size_Range9:5-6 5.281e-8988
Genome_Size_Range9:6-8 0.0006732438
Gram_Stain:Gram_Pos 2.149e-1316150
Habitat:Aquatic 0.00053844491
Habitat:Multiple 8.154e-735178
Habitat:Specialized 0.00001653253
Habitat:Terrestrial 0.0002967231
Motility:Yes 0.000112469267
Optimal_temp.:- 0.004995599257
Optimal_temp.:25-30 0.0037577119
Oxygen_Req:Aerobic 0.000430445185
Oxygen_Req:Anaerobic 4.102e-960102
Oxygen_Req:Facultative 6.975e-1330201
Oxygen_Req:Microaerophilic 0.00010481418
Pathogenic_in:Animal 0.00184451266
Pathogenic_in:Human 0.000070551213
Pathogenic_in:No 0.000549693226
Shape:Irregular_coccus 1.867e-71617
Shape:Oval 0.004044455
Shape:Rod 2.141e-1277347
Shape:Sphere 0.00004251519
Shape:Spiral 0.00034142134
Temp._range:Hyperthermophilic 0.00027171623
Temp._range:Mesophilic 1.878e-9131473
Temp._range:Thermophilic 0.00174422035



Back to top



ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 1
Effective number of orgs (counting one per cluster within 468 clusters): 1

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
ANAE240017 Actinomyces oris MG1 0.00721617606


Names of the homologs of the genes in the group in each of these orgs
  EG11849   EG10400   EG10398   EG10396   EG10394   EG10391   
ANAE240017 ANA_2655ANA_2655ANA_2782ANA_2784ANA_2785ANA_2785


Organism features enriched in list (features available for 0 out of the 1 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  



Back to top



ORGANISMS DEPLETED FOR GROUP:




Back to top



PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
IDNCAT-PWY (L-idonate degradation)2461520.5102
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491060.4663
GALACTCAT-PWY (D-galactonate degradation)104840.4645
PWY0-381 (glycerol degradation I)4171980.4632
GLUCONSUPER-PWY (D-gluconate degradation)2291380.4566
GALACTITOLCAT-PWY (galactitol degradation)73660.4532
SERDEG-PWY (L-serine degradation)3491780.4524
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491430.4393
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491430.4393
GLUCARDEG-PWY (D-glucarate degradation I)1521030.4314
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951210.4301
VALDEG-PWY (valine degradation I)2901560.4298
CHOLINE-BETAINE-ANA-PWY (choline degradation I)135950.4287
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))138960.4256
PWY0-981 (taurine degradation IV)106800.4185
PWY-5148 (acyl-CoA hydrolysis)2271310.4121
PWY0-1314 (fructose degradation)2241290.4059



Back to top



PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10400   EG10398   EG10396   EG10394   EG10391   
EG118490.9998880.9992850.9989320.9995720.999293
EG104000.9992210.9987640.9996180.999292
EG103980.9998430.9997440.999577
EG103960.9995720.999285
EG103940.999899
EG10391



Back to top



PAIRWISE BLAST SCORES:

  EG11849   EG10400   EG10398   EG10396   EG10394   EG10391   
EG118490.0f05.0e-56----
EG104001.0e-500.0f0----
EG10398--0.0f0---
EG10396---0.0f0--
EG10394----0.0f0-
EG10391----3.2e-160.0f0



Back to top



PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- PWY0-381 (glycerol degradation I) (degree of match pw to cand: 0.429, degree of match cand to pw: 0.500, average score: 0.931)
  Genes in pathway or complex:
             0.9246 0.7693 EG10393 (glpC) ANGLYC3PDEHYDROGSUBUNITC-MONOMER (glycerol-3-phosphate dehydrogenase (anaerobic), small subunit)
             0.9243 0.6699 EG10392 (glpB) ANGLYC3PDEHYDROGSUBUNITB-MONOMER (glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit)
   *in cand* 0.9996 0.9993 EG10391 (glpA) ANGLYC3PDEHYDROGSUBUNITA-MONOMER (glycerol-3-phosphate dehydrogenase (anaerobic), large subunit)
   *in cand* 0.9997 0.9996 EG10394 (glpD) AERGLYC3PDEHYDROG-MONOMER (GlpD)
   *in cand* 0.9996 0.9992 EG10398 (glpK) GLYCEROL-KIN-MONOMER (GlpK)
             0.9722 0.9317 EG10399 (glpQ) GLYCPDIESTER-PERI-MONOMER (GlpQ)
             0.9391 0.8981 EG11050 (ugpQ) GLYCPDIESTER-CYTO-MONOMER (glycerophosphodiester phosphodiesterase, cytosolic)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9994 0.9988 EG10396 (glpF) GLPF-MONOMER (GlpF)
   *in cand* 0.9995 0.9988 EG10400 (glpR) PD03576 (GlpR transcriptional repressor)
   *in cand* 0.9995 0.9989 EG11849 (yihW) EG11849-MONOMER (predicted DNA-binding transcriptional regulator)



Back to top



GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10396 EG10398 (centered at EG10396)
EG10391 (centered at EG10391)
EG10394 (centered at EG10394)
EG10400 (centered at EG10400)
EG11849 (centered at EG11849)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11849   EG10400   EG10398   EG10396   EG10394   EG10391   
234/623262/623395/623287/623340/623298/623
AAEO224324:0:Tyes--0---
AAUR290340:2:Tyes1082108201594594
AAVE397945:0:Tyes110-88
ABAC204669:0:Tyes00234323422673-
ABAU360910:0:Tyes001052-11
ABOR393595:0:Tyes--0-711711
ACAU438753:0:Tyes0653625626624624
ACEL351607:0:Tyes688---0-
ACRY349163:8:Tyes00625-814814
ADEH290397:0:Tyes--937--0
AEHR187272:0:Tyes--0---
AHYD196024:0:Tyes33014791
AMAR329726:9:Tyes----00
AMET293826:0:Tyes-2660---
ANAE240017:0:Tyes00119120121121
AORE350688:0:Tyes-16160---
APLE416269:0:Tyes44944910-5
APLE434271:0:Tno41341310-4
ASAL382245:5:Tyes3673673703693660
ASP1667:3:Tyes1149-0-640640
ASP232721:2:Tyes110-88
ASP62928:0:Tyes-10891-00
ASP62977:0:Tyes--0-1775-
ASP76114:2:Tyes--0-11
AVAR240292:3:Tyes--0---
BABO262698:0:Tno----00
BABO262698:1:Tno00----
BAFZ390236:2:Fyes--1033
BAMB339670:3:Tno004533
BAMB398577:3:Tno004533
BAMY326423:0:Tyes2652396102-
BANT260799:0:Tno-279102-
BANT261594:2:Tno-2801022
BANT568206:2:Tyes-0289290288-
BANT592021:2:Tno-2891022
BAPH198804:0:Tyes---0--
BBAC264462:0:Tyes--2321-00
BBRO257310:0:Tyes90890823170909909
BBUR224326:21:Fno--1033
BCAN483179:0:Tno--0-413413
BCAN483179:1:Tno00----
BCEN331271:2:Tno004533
BCEN331272:3:Tyes004533
BCER226900:1:Tyes-293102-
BCER288681:0:Tno-281102-
BCER315749:1:Tyes--102-
BCER405917:1:Tyes-302-0--
BCER572264:1:Tno-316102-
BCLA66692:0:Tyes3191030023001845845
BGAR290434:2:Fyes--1022
BHAL272558:0:Tyes7750311310313313
BHEN283166:0:Tyes----00
BHER314723:0:Fyes--1044
BJAP224911:0:Fyes102710270-10301030
BLIC279010:0:Tyes-27671022
BLON206672:0:Tyes---0--
BMAL243160:1:Tno551022
BMAL320388:1:Tno004533
BMAL320389:1:Tyes551022
BMEL224914:0:Tno----0-
BMEL224914:1:Tno11---0
BMEL359391:0:Tno----00
BMEL359391:1:Tno00----
BOVI236:0:Tyes--0-361361
BOVI236:1:Tyes00----
BPAR257311:0:Tno107410741931010751075
BPER257313:0:Tyes001083-11
BPET94624:0:Tyes207620760-2077-
BPSE272560:1:Tyes551022
BPSE320372:1:Tno551022
BPSE320373:1:Tno661022
BPUM315750:0:Tyes--102-
BSP107806:2:Tyes---0--
BSP36773:1:Tyes-----0
BSP36773:2:Tyes00453-
BSP376:0:Tyes8778770-36243624
BSUB:0:Tyes-2836102-
BSUI204722:0:Tyes--0-398398
BSUI204722:1:Tyes00----
BSUI470137:0:Tno--0-381381
BSUI470137:1:Tno00----
BTHA271848:1:Tno551022
BTHU281309:1:Tno-268102-
BTHU412694:1:Tno-260102-
BTRI382640:1:Tyes----00
BTUR314724:0:Fyes--1044
BVIE269482:7:Tyes004533
BWEI315730:4:Tyes-292102-
BXEN266265:1:Tyes2120----
CACE272562:1:Tyes--5500--
CBEI290402:0:Tyes--02--
CBOT36826:1:Tno00584585--
CBOT441770:0:Tyes00565566--
CBOT441771:0:Tno-0996997--
CBOT441772:1:Tno553011101111-590
CBOT498213:1:Tno569011411142-605
CBOT508765:1:Tyes--01043--
CBOT515621:2:Tyes684012741275-720
CBOT536232:0:Tno00723724--
CBUR227377:1:Tyes--1-0-
CBUR360115:1:Tno--0-1-
CBUR434922:2:Tno--0-1-
CCON360104:2:Tyes---0--
CDIF272563:1:Tyes00663---
CDIP257309:0:Tyes0-783784785785
CEFF196164:0:Fyes0-919---
CGLU196627:0:Tyes249-1225-00
CHUT269798:0:Tyes----00
CHYD246194:0:Tyes--12-0
CJAP155077:0:Tyes----0-
CJEI306537:0:Tyes0-584---
CMAQ397948:0:Tyes-----0
CMET456442:0:Tyes---0--
CMIC31964:2:Tyes---077
CMIC443906:2:Tyes--8700
CNOV386415:0:Tyes292901-4
CPER195102:1:Tyes--2219522-0
CPER195103:0:Tno--2374749-0
CPER289380:3:Tyes--14870--
CPHY357809:0:Tyes1138-0--277
CSAL290398:0:Tyes110-22
CSP501479:6:Fyes--180-19
CSP501479:7:Fyes00--1-
CSP78:2:Tyes00----
CTEP194439:0:Tyes--0---
CTET212717:0:Tyes--595170-0
CVIO243365:0:Tyes00139140142142
DARO159087:0:Tyes--1-00
DDES207559:0:Tyes337933792133810
DGEO319795:0:Tyes--1022
DHAF138119:0:Tyes--13100--
DNOD246195:0:Tyes--1200
DOLE96561:0:Tyes--370-16060
DRAD243230:3:Tyes--88888900
DRED349161:0:Tyes0-27412742-2740
DSHI398580:5:Tyes112817-0-
DVUL882:1:Tyes--1186118511840
ECAR218491:0:Tyes00141140429
ECOL199310:0:Tno201113962064206513990
ECOL316407:0:Tno113215971091109015940
ECOL331111:6:Tno179313041844184513070
ECOL362663:0:Tno180112301848184912330
ECOL364106:1:Tno192413921973197413950
ECOL405955:2:Tyes174212741797179812770
ECOL409438:6:Tyes171012161758175912190
ECOL413997:0:Tno163111291672167311320
ECOL439855:4:Tno179712531894189512560
ECOL469008:0:Tno382633781378001122
ECOL481805:0:Tno387533827382601142
ECOL585034:0:Tno172612261770177112290
ECOL585035:0:Tno187413821920192113850
ECOL585055:0:Tno183213231883188413260
ECOL585056:2:Tno182112991860186113020
ECOL585057:0:Tno747153770270115400
ECOL585397:0:Tno184813541889189013570
ECOL83334:0:Tno173711761780178111790
ECOLI:0:Tno166811951709171011980
ECOO157:0:Tno175411891799180011920
EFAE226185:3:Tyes--201-
EFER585054:1:Tyes245524552897289624580
ELIT314225:0:Tyes----00
ESP42895:1:Tyes104010401265126410430
FALN326424:0:Tyes--2938-00
FJOH376686:0:Tyes----00
FMAG334413:1:Tyes---0--
FNOD381764:0:Tyes-----0
FNUC190304:0:Tyes-51910--
FPHI484022:1:Tyes--021-
FRANT:0:Tno--032-
FSP106370:0:Tyes----00
FSP1855:0:Tyes--0-34543451
FTUL351581:0:Tno--0106107-
FTUL393011:0:Tno--09495-
FTUL393115:0:Tyes--032-
FTUL401614:0:Tyes--201-
FTUL418136:0:Tno--032-
FTUL458234:0:Tno--09899-
GKAU235909:1:Tyes--10814-
GMET269799:1:Tyes--0-11
GOXY290633:5:Tyes00321128
GSUL243231:0:Tyes--1-00
GTHE420246:1:Tyes--10854854
GVIO251221:0:Tyes--17690--
HARS204773:0:Tyes--0-30033003
HAUR316274:2:Tyes--447-02280
HCHE349521:0:Tyes228522852287-22860
HDUC233412:0:Tyes423423-0-6
HHAL349124:0:Tyes--0-11
HINF281310:0:Tyes606043-0
HINF374930:0:Tyes001157--1160
HINF71421:0:Tno007372-67
HMAR272569:8:Tyes00181--183
HMOD498761:0:Tyes1102110210-2
HMUK485914:1:Tyes15115110-3
HSAL478009:4:Tyes--0--1
HSOM205914:1:Tyes33---0
HSOM228400:0:Tno00---3
HSP64091:2:Tno--0--1
HWAL362976:1:Tyes--0--1
ILOI283942:0:Tyes00----
JSP290400:1:Tyes001638-16391639
JSP375286:0:Tyes--0-33873387
KPNE272620:2:Tyes115411541393139211570
KRAD266940:2:Fyes21050535536534534
LACI272621:0:Tyes--4220--
LBIF355278:2:Tyes--1119013631363
LBIF456481:2:Tno--1159014091409
LBOR355276:1:Tyes--0949181181
LBOR355277:1:Tno--11070650650
LBRE387344:2:Tyes--0664--
LCAS321967:1:Tyes--194501-
LCHO395495:0:Tyes112-00
LDEL321956:0:Tyes--15910--
LDEL390333:0:Tyes---0--
LGAS324831:0:Tyes11--0--
LHEL405566:0:Tyes---0--
LINN272626:1:Tno0213912001201958-
LINT189518:1:Tyes--01347142117
LINT267671:1:Tno--10580936958
LINT363253:3:Tyes00---1023
LJOH257314:0:Tyes---0--
LLAC272622:5:Tyes0-53555454
LLAC272623:0:Tyes53-20--
LMES203120:1:Tyes---0--
LMON169963:0:Tno0206711881189943-
LMON265669:0:Tyes0194611751176928-
LPLA220668:0:Tyes265826584072562-0
LPNE272624:0:Tno----00
LPNE297245:1:Fno----00
LPNE297246:1:Fyes----00
LPNE400673:0:Tno----00
LREU557436:0:Tyes--0693--
LSAK314315:0:Tyes39639602--
LSPH444177:1:Tyes1425-1433201434
LWEL386043:0:Tyes01751987988744-
LXYL281090:0:Tyes--1012931293
MABS561007:1:Tyes--1032863286
MAQU351348:2:Tyes--486-00
MAVI243243:0:Tyes--0-38213821
MBOV233413:0:Tno----00
MBOV410289:0:Tno--387-00
MCAP340047:0:Tyes--10--
MEXT419610:0:Tyes002700-34313431
MGEN243273:0:Tyes--0---
MGIL350054:3:Tyes00583-41034103
MHYO262719:0:Tyes--0---
MHYO262722:0:Tno--0---
MHYO295358:0:Tno--0---
MLEP272631:0:Tyes--982-00
MLOT266835:2:Tyes880493052117
MMAR394221:0:Tyes--0---
MMAR402880:1:Tyes---0--
MMAR426368:0:Tyes---0--
MMAR444158:0:Tyes---0--
MMOB267748:0:Tyes--0---
MMYC272632:0:Tyes--0---
MPEN272633:0:Tyes--0---
MPET420662:1:Tyes--1-00
MPNE272634:0:Tyes--0---
MPUL272635:0:Tyes--01--
MSED399549:0:Tyes-----0
MSME246196:0:Tyes04196089661366151639
MSP164756:1:Tno004818-11641164
MSP164757:0:Tno005166-11991199
MSP189918:2:Tyes004887-11741174
MSP266779:3:Tyes008-11
MSP400668:0:Tyes110-22
MSP409:2:Tyes332233227150724-
MSUC221988:0:Tyes19919902-5
MTBCDC:0:Tno--423-00
MTBRV:0:Tno--395-00
MTHE264732:0:Tyes0587----
MTUB336982:0:Tno--396-00
MTUB419947:0:Tyes--396-00
MVAN350058:0:Tyes0-5338-15081508
MXAN246197:0:Tyes--0-548548
NARO279238:0:Tyes----0-
NEUR228410:0:Tyes----0-
NEUT335283:2:Tyes----0-
NFAR247156:2:Tyes191119110-11
NGON242231:0:Tyes00----
NHAM323097:2:Tyes--0817692692
NMEN122586:0:Tno00----
NMEN122587:0:Tyes00----
NMEN272831:0:Tno00----
NMEN374833:0:Tno00----
NOCE323261:1:Tyes--0---
NSP103690:6:Tyes--0---
NSP35761:1:Tyes0--396457457
NWIN323098:0:Tyes--072627352735
OANT439375:4:Tyes----0-
OANT439375:5:Tyes00832717-2238
OCAR504832:0:Tyes--759-00
OIHE221109:0:Tyes-337450-
PABY272844:0:Tyes--0---
PACN267747:0:Tyes--5758-0
PAER208963:0:Tyes115300
PAER208964:0:Tno5705705695685710
PATL342610:0:Tyes--0-150-
PCRY335284:1:Tyes----0-
PDIS435591:0:Tyes--1022
PENT384676:0:Tyes112300
PFLU205922:0:Tyes221033
PFLU216595:1:Tyes11230-
PFLU220664:0:Tyes207520752074207320760
PFUR186497:0:Tyes--0--1
PHAL326442:0:Tyes0012--
PHAL326442:1:Tyes----00
PING357804:0:Tyes10102065-
PLUM243265:0:Fyes114665466400
PLUT319225:0:Tyes--0---
PMEN399739:0:Tyes181618161814-18170
PMOB403833:0:Tyes--0---
PMUL272843:1:Tyes0076-3
PNAP365044:8:Tyes--0-11
PPEN278197:0:Tyes--021-
PPRO298386:2:Tyes00899011213
PPUT160488:0:Tno112300
PPUT351746:0:Tyes112300
PPUT76869:0:Tno221033
PSP117:0:Tyes0-6653569666666
PSP296591:2:Tyes110-88
PSTU379731:0:Tyes112312380
PSYR205918:0:Tyes221033
PSYR223283:2:Tyes221033
PTOR263820:0:Tyes-----0
RALB246199:0:Tyes--0---
RCAS383372:0:Tyes---0-2045
RDEN375451:4:Tyes220-707-
RETL347834:0:Tyes008-11
REUT264198:3:Tyes003-44
REUT381666:2:Tyes003-44
RFER338969:1:Tyes134413441345-00
RLEG216596:2:Tyes008-11
RMET266264:1:Tyes-----0
RMET266264:2:Tyes003-4-
RPAL258594:0:Tyes194519451237019441944
RPAL316055:0:Tyes002374-11
RPAL316056:0:Tyes00869-11
RPAL316057:0:Tyes305830582533143930570
RPAL316058:0:Tyes246824680-2467-
RPOM246200:1:Tyes6066060-607607
RRUB269796:1:Tyes17390743-243243
RSAL288705:0:Tyes1192-0122
RSOL267608:1:Tyes008-11
RSP101510:3:Fyes-5200-11
RSP357808:0:Tyes--30-1524
RSPH272943:4:Tyes8278270-7-
RSPH349101:2:Tno7967960-7-
RSPH349102:5:Tyes116511650-8-
RXYL266117:0:Tyes--0266
SACI330779:0:Tyes--0884-882
SACI56780:0:Tyes-----0
SAGA205921:0:Tno-1498012731-
SAGA208435:0:Tno-1631013491-
SAGA211110:0:Tyes-1650014241-
SALA317655:1:Tyes----01486
SARE391037:0:Tyes--1783178217840
SAUR158878:1:Tno-9491022
SAUR158879:1:Tno-9471022
SAUR196620:0:Tno-9931022
SAUR273036:0:Tno-9411022
SAUR282458:0:Tno-1021102-
SAUR282459:0:Tno-9111022
SAUR359786:1:Tno-9081022
SAUR359787:1:Tno-8591022
SAUR367830:3:Tno-9041022
SAUR418127:0:Tyes-9451022
SAUR426430:0:Tno-943102-
SAUR93061:0:Fno-11611022
SAUR93062:1:Tno-8471022
SAVE227882:1:Fyes190805599583936093609
SBAL399599:3:Tyes--0-3301-
SBAL402882:1:Tno--0-3167-
SBOY300268:1:Tyes173912901796179712930
SCO:2:Fyes39310627305237853785
SDEG203122:0:Tyes----0-
SDEN318161:0:Tyes--0-28-
SDYS300267:1:Tyes113011301279127811270
SENT209261:0:Tno288032482821282032450
SENT220341:0:Tno125116211192119116180
SENT295319:0:Tno315326933212321326960
SENT321314:2:Tno166111881721172211910
SENT454169:2:Tno174712541815181612570
SEPI176279:1:Tyes913913102-
SEPI176280:0:Tno864864102-
SERY405948:0:Tyes0-29668082963494
SFLE198214:0:Tyes160511021650165111050
SFLE373384:0:Tno124510711611161210740
SFUM335543:0:Tyes---0-1453
SGLO343509:3:Tyes4784783220481481
SGOR29390:0:Tyes--201-
SHAE279808:0:Tyes--1600
SHAL458817:0:Tyes--0-373-
SHIGELLA:0:Tno119916841153115216810
SLAC55218:1:Fyes189018900-18891889
SLOI323850:0:Tyes--2754-0-
SMAR399550:0:Tyes--0---
SMED366394:2:Tyes--0---
SMED366394:3:Tyes743743--00
SMEL266834:0:Tyes---0--
SMEL266834:1:Tyes--0---
SMEL266834:2:Tyes799799--00
SMUT210007:0:Tyes---0--
SONE211586:1:Tyes--32033220-
SPEA398579:0:Tno--3188-0-
SPNE1313:0:Tyes-013005521299-
SPNE170187:0:Tyes-013476811346-
SPNE171101:0:Tno-012685681267-
SPNE487213:0:Tno-078396782-
SPNE487214:0:Tno-013206041319-
SPNE488221:0:Tno-012855781284-
SPRO399741:1:Tyes451445144679467845160
SPYO160490:0:Tno19519511330-
SPYO186103:0:Tno24924911870-
SPYO193567:0:Tno141214121320133-
SPYO198466:0:Tno19319311330-
SPYO286636:0:Tno-12089810980-
SPYO293653:0:Tno26426411940-
SPYO319701:0:Tyes21121111390-
SPYO370551:0:Tno26926912010-
SPYO370552:0:Tno21521511430-
SPYO370553:0:Tno26626611960-
SPYO370554:0:Tyes25025011420-
SRUB309807:1:Tyes--8-0952
SSAP342451:2:Tyes-727120-
SSED425104:0:Tyes--0-209-
SSOL273057:0:Tyes--5000-844
SSON300269:1:Tyes165412891701170212920
SSP1148:0:Tyes-----0
SSP292414:1:Tyes--0---
SSP292414:2:Tyes00--11
SSP644076:5:Fyes---0--
SSP644076:7:Fyes11--00
SSP64471:0:Tyes----00
SSP94122:1:Tyes--449-0-
SSUI391295:0:Tyes--021-
SSUI391296:0:Tyes--012501-
STHE292459:0:Tyes19181918801-01599
STRO369723:0:Tyes--1954200
STYP99287:1:Tyes173012321791179212350
TACI273075:0:Tyes-----0
TDEN243275:0:Tyes--0---
TERY203124:0:Tyes--0---
TFUS269800:0:Tyes--0-18251825
TKOD69014:0:Tyes--0---
TLET416591:0:Tyes-3140---
TMAR243274:0:Tyes--10--
TPEN368408:1:Tyes-----0
TPET390874:0:Tno--2--0
TPSE340099:0:Tyes606010--
TROS309801:0:Tyes--2-00
TROS309801:1:Tyes---0--
TSP1755:0:Tyes59590899--
TSP28240:0:Tyes00696---
TTEN273068:0:Tyes60705758--
TTHE300852:1:Tyes--0--1
TVOL273116:0:Tyes-----0
UMET351160:0:Tyes---58-0
VCHO:1:Fyes28128185-087
VCHO345073:0:Tno00381382300385
VEIS391735:1:Tyes306306--00
VFIS312309:1:Tyes3310415
VPAR223926:1:Tyes22103-
VVUL196600:1:Tyes-----0
VVUL196600:2:Tyes22103-
VVUL216895:0:Tno-----0
VVUL216895:1:Tno11230-
XAUT78245:1:Tyes---0487487
XAXO190486:0:Tyes330122
XCAM190485:0:Tyes330122
XCAM314565:0:Tno330122
XCAM316273:0:Tno003211
XCAM487884:0:Tno330122
XFAS160492:2:Tno--2100
XFAS183190:1:Tyes--2100
XFAS405440:0:Tno--2100
YENT393305:1:Tyes37963796013815118
YPES187410:5:Tno38943894103888363
YPES214092:3:Tno2525-037133599
YPES349746:2:Tno354635460139063906
YPES360102:3:Tyes319831983302330136270
YPES377628:2:Tno388038803690368935150
YPES386656:2:Tno003783378232553398
YPSE273123:2:Tno37373737013740131
YPSE349747:2:Tno38503850013852123



Back to top