CANDIDATE ID: 447

CANDIDATE ID: 447

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9904060e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    6.6666667e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G7409 (ygaD) (b2700)
   Products of gene:
     - G7409-MONOMER (conserved protein)

- EG11645 (ydeJ) (b1537)
   Products of gene:
     - EG11645-MONOMER (conserved protein)

- EG11311 (dusB) (b3260)
   Products of gene:
     - EG11311-MONOMER (tRNA dihydrouridine synthase)
       Reactions:
        a tRNA  ->  tRNA containing 5,6-dihydrouridine

- EG10438 (hfq) (b4172)
   Products of gene:
     - EG10438-MONOMER (RNA-binding protein that affects many cellular processes; homolog of mammalian Sm/Sm-like proteins)
     - CPLX0-1461 (HF-I, host factor for RNA phage Q β replication)

- EG10387 (glnL) (b3869)
   Products of gene:
     - PROTEIN-NRIIP (NtrB-P)
     - PROTEIN-NRII (NtrB)
       Regulatees:
     - GLNL-CPLX (NtrB)

- EG10317 (fis) (b3261)
   Products of gene:
     - PD00196 (Fis)
       Regulatees:
        TU0-6409 (gltX)
        TU0-13407 (yeaR-yoaG)
        TU0-14739 (ogt)
        TU00205 (guaBA)
        TU00176 (dps)
        TU0-14627 (trg)
        TU0-3341 (ygjG)
        TU0-6569 (ansB)
        TU543 (rnpB)
        TU00516 (glyU)
        TU0-2504 (topA)
        TU0-8001 (glnQ)
        TU0-3721 (acs-yjcHG)
        TU0-5903 (glnA)
        TU00029 (glnALG)
        TU0-14398 (crp)
        TU0-1963 (glcC)
        TU00501 (pheV)
        TU522 (mazEFG)
        TU523 (mazEFG)
        TU0-1187 (rrsG-gltW-rrlG-rrfG)
        TU0-1143 (yfiD)
        TU00495 (valUXY-lysV)
        TU00514 (alaWX)
        TU00500 (argW)
        TU00448 (nuoABCEFGHIJKLMN)
        TU00030 (glpABC)
        TU00216 (glpTQ)
        TU00047 (nrdAB)
        TU00140 (gyrA)
        TU00494 (proL)
        TU0-7901 (mglAC)
        TU00398 (osmE)
        TU0-6507 (katE)
        TU0-1501 (flxA)
        TU0-6981 (cspI)
        TU00190 (marRAB)
        TU369 (gadBC)
        TU0-3901 (sra)
        TU0-2501 (topA)
        TU00198 (adhE)
        TU00139 (hns)
        TU00511 (tyrTV-tpr)
        TU00510 (serX)
        TU00044 (narGHJI)
        TU581 (hlyE)
        TU00158 (ndh)
        TU0-1141 (ptsG)
        TU00288 (hyaABCDEF)
        TU00061 (pyrD)
        TU00380 (pflB)
        TU00019 (dmsABC)
        TU00491 (argU)
        TU488 (hupB)
        TU0-1189 (rrsH-ileV-alaV-rrlH-rrfH)
        TU343 (metY)
        TU0-6223 (metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp)
        TU00517 (metY-yhbC-nusA-infB)
        TU0-1601 (nanATEK-yhcH)
        TU00021 (dusB-fis)
        TU0-1191 (rrsD-ileU-alaU-rrlD-rrfD-thrV-rrfF)
        TU0-14396 (crp)
        TU00119 (crp)
        TU00046 (nirBDC-cysG)
        TU586 (gadAX)
        TU00519 (proK)
        TU00374 (xylFGHR)
        TU00138 (aldB)
        TU00193 (mtlADR)
        TU0-2603 (gyrB)
        TU0-4802 (bglGFB)
        TU0-1183 (rrsC-gltU-rrlC-rrfC)
        TU00503 (argX-hisR-leuT-proM)
        TU00215 (fadBA)
        TU0-1181 (rrsA-ileT-alaT-rrlA-rrfA)
        TU00430 (trmA)
        TU0-1182 (rrsB-gltT-rrlB-rrfB)
        TU00504 (thrU-tyrU-glyT-thrT-tufB)
        TU486 (hupA)
        TU0-1186 (rrsE-gltV-rrlE-rrfE)
        TU00038 (malEFG)
        TU0-3723 (acs-yjcHG)
        TU00199 (nrfABCDEFG)
        TU0-3882 (proP)
        TU00159 (fumB)
        TU00520 (pheU)
        TU241 (msrA)
        TU00506 (leuX)
        TU00521 (leuQPV)
        TU0-1981 (osmY)
        TU00490 (thrW)
        TU0-1142 (ptsG)
        TU00507 (metT-leuW-glnUW-metU-glnVX)
        TU489 (hupB)
        TU871 (queA)
        TU00489 (aspV)
        TU796 (acnB)
        TU00523 (lpdA)
        TU00110 (carAB)
        TU0-5221 (pdxA-rsmA)
        TU0-5201 (pdxA-rsmA-apaGH)
        TU00492 (lysT-valT-lysW)
        TU00509 (serT)
        TU00045 (narK)
        TU00018 (deoCABD)
     - CPLX0-7705 (Fis DNA binding transcriptional dual regulator)
       Regulatees:
        TU0-6409 (gltX)
        TU0-13407 (yeaR-yoaG)
        TU0-14739 (ogt)
        TU00205 (guaBA)
        TU00176 (dps)
        TU0-14627 (trg)
        TU0-3341 (ygjG)
        TU0-6569 (ansB)
        TU543 (rnpB)
        TU00516 (glyU)
        TU0-2504 (topA)
        TU0-8001 (glnQ)
        TU0-3721 (acs-yjcHG)
        TU0-5903 (glnA)
        TU00029 (glnALG)
        TU0-14398 (crp)
        TU0-1963 (glcC)
        TU00501 (pheV)
        TU522 (mazEFG)
        TU523 (mazEFG)
        TU0-1187 (rrsG-gltW-rrlG-rrfG)
        TU0-1143 (yfiD)
        TU00495 (valUXY-lysV)
        TU00514 (alaWX)
        TU00500 (argW)
        TU00448 (nuoABCEFGHIJKLMN)
        TU00030 (glpABC)
        TU00216 (glpTQ)
        TU00047 (nrdAB)
        TU00140 (gyrA)
        TU00494 (proL)
        TU0-7901 (mglAC)
        TU00398 (osmE)
        TU0-6507 (katE)
        TU0-1501 (flxA)
        TU0-6981 (cspI)
        TU00190 (marRAB)
        TU369 (gadBC)
        TU0-3901 (sra)
        TU0-2501 (topA)
        TU00198 (adhE)
        TU00139 (hns)
        TU00511 (tyrTV-tpr)
        TU00510 (serX)
        TU00044 (narGHJI)
        TU581 (hlyE)
        TU00158 (ndh)
        TU0-1141 (ptsG)
        TU00288 (hyaABCDEF)
        TU00061 (pyrD)
        TU00380 (pflB)
        TU00019 (dmsABC)
        TU00491 (argU)
        TU488 (hupB)
        TU0-1189 (rrsH-ileV-alaV-rrlH-rrfH)
        TU343 (metY)
        TU0-6223 (metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp)
        TU00517 (metY-yhbC-nusA-infB)
        TU0-1601 (nanATEK-yhcH)
        TU00021 (dusB-fis)
        TU0-1191 (rrsD-ileU-alaU-rrlD-rrfD-thrV-rrfF)
        TU0-14396 (crp)
        TU00119 (crp)
        TU00046 (nirBDC-cysG)
        TU586 (gadAX)
        TU00519 (proK)
        TU00374 (xylFGHR)
        TU00138 (aldB)
        TU00193 (mtlADR)
        TU0-2603 (gyrB)
        TU0-4802 (bglGFB)
        TU0-1183 (rrsC-gltU-rrlC-rrfC)
        TU00503 (argX-hisR-leuT-proM)
        TU00215 (fadBA)
        TU0-1181 (rrsA-ileT-alaT-rrlA-rrfA)
        TU00430 (trmA)
        TU0-1182 (rrsB-gltT-rrlB-rrfB)
        TU00504 (thrU-tyrU-glyT-thrT-tufB)
        TU486 (hupA)
        TU0-1186 (rrsE-gltV-rrlE-rrfE)
        TU00038 (malEFG)
        TU0-3723 (acs-yjcHG)
        TU00199 (nrfABCDEFG)
        TU0-3882 (proP)
        TU00159 (fumB)
        TU00520 (pheU)
        TU241 (msrA)
        TU00506 (leuX)
        TU00521 (leuQPV)
        TU0-1981 (osmY)
        TU00490 (thrW)
        TU0-1142 (ptsG)
        TU00507 (metT-leuW-glnUW-metU-glnVX)
        TU489 (hupB)
        TU871 (queA)
        TU00489 (aspV)
        TU796 (acnB)
        TU00523 (lpdA)
        TU00110 (carAB)
        TU0-5221 (pdxA-rsmA)
        TU0-5201 (pdxA-rsmA-apaGH)
        TU00492 (lysT-valT-lysW)
        TU00509 (serT)
        TU00045 (narK)
        TU00018 (deoCABD)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 220
Effective number of orgs (counting one per cluster within 468 clusters): 157

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM45
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola6
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A6
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110186
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103316
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae6
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-106
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80046
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339136
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3066
XAUT78245 ncbi Xanthobacter autotrophicus Py26
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VEIS391735 ncbi Verminephrobacter eiseniae EF01-26
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TTUR377629 ncbi Teredinibacter turnerae T79016
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252596
TCRU317025 ncbi Thiomicrospira crunogena XCL-26
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
SSP94122 ncbi Shewanella sp. ANA-36
SSP644076 Silicibacter sp. TrichCH4B6
SSP292414 ncbi Ruegeria sp. TM10406
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB36
SPRO399741 ncbi Serratia proteamaculans 5686
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SONE211586 ncbi Shewanella oneidensis MR-16
SMEL266834 ncbi Sinorhizobium meliloti 10216
SMED366394 ncbi Sinorhizobium medicae WSM4196
SLOI323850 ncbi Shewanella loihica PV-46
SLAC55218 Ruegeria lacuscaerulensis6
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-406
SBOY300268 ncbi Shigella boydii Sb2276
SBAL402882 ncbi Shewanella baltica OS1856
SBAL399599 ncbi Shewanella baltica OS1956
SALA317655 ncbi Sphingopyxis alaskensis RB22565
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170256
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170296
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.16
RSOL267608 ncbi Ralstonia solanacearum GMI10006
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111706
RPOM246200 ncbi Ruegeria pomeroyi DSS-36
RPAL316058 ncbi Rhodopseudomonas palustris HaA26
RPAL316057 ncbi Rhodopseudomonas palustris BisB56
RPAL316056 ncbi Rhodopseudomonas palustris BisB186
RPAL316055 ncbi Rhodopseudomonas palustris BisA536
RPAL258594 ncbi Rhodopseudomonas palustris CGA0096
RMET266264 ncbi Ralstonia metallidurans CH346
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38416
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1346
RETL347834 ncbi Rhizobium etli CFN 426
RDEN375451 ncbi Roseobacter denitrificans OCh 1146
PTHE370438 ncbi Pelotomaculum thermopropionicum SI6
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-16
PSP296591 ncbi Polaromonas sp. JS6666
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PPRO298386 ncbi Photobacterium profundum SS96
PNAP365044 ncbi Polaromonas naphthalenivorans CJ26
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PING357804 ncbi Psychromonas ingrahamii 376
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PCAR338963 ncbi Pelobacter carbinolicus DSM 23806
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
OCAR504832 ncbi Oligotropha carboxidovorans OM56
OANT439375 ncbi Ochrobactrum anthropi ATCC 491886
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2556
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534425
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NHAM323097 ncbi Nitrobacter hamburgensis X146
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124446
MTHE264732 ncbi Moorella thermoacetica ATCC 390735
MSP409 Methylobacterium sp.6
MSP400668 ncbi Marinomonas sp. MWYL16
MSP266779 ncbi Chelativorans sp. BNC16
MPET420662 ncbi Methylibium petroleiphilum PM15
MMAR394221 ncbi Maricaulis maris MCS105
MMAG342108 ncbi Magnetospirillum magneticum AMB-16
MLOT266835 ncbi Mesorhizobium loti MAFF3030996
MFLA265072 ncbi Methylobacillus flagellatus KT6
MEXT419610 ncbi Methylobacterium extorquens PA16
MCAP243233 ncbi Methylococcus capsulatus Bath6
MAQU351348 ncbi Marinobacter aquaeolei VT86
LCHO395495 ncbi Leptothrix cholodnii SP-66
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille6
JSP290400 ncbi Jannaschia sp. CCS16
ILOI283942 ncbi Idiomarina loihiensis L2TR6
HNEP81032 Hyphomonas neptunium5
HMOD498761 ncbi Heliobacterium modesticaldum Ice15
HHAL349124 ncbi Halorhodospira halophila SL15
HCHE349521 ncbi Hahella chejuensis KCTC 23966
HARS204773 ncbi Herminiimonas arsenicoxydans6
GURA351605 ncbi Geobacter uraniireducens Rf46
GSUL243231 ncbi Geobacter sulfurreducens PCA6
GOXY290633 ncbi Gluconobacter oxydans 621H5
GMET269799 ncbi Geobacter metallireducens GS-156
GBET391165 ncbi Granulibacter bethesdensis CGDNIH16
ESP42895 Enterobacter sp.6
ELIT314225 ncbi Erythrobacter litoralis HTCC25946
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DSHI398580 ncbi Dinoroseobacter shibae DFL 126
DRED349161 ncbi Desulfotomaculum reducens MI-15
DHAF138119 ncbi Desulfitobacterium hafniense Y515
DARO159087 ncbi Dechloromonas aromatica RCB6
CVIO243365 ncbi Chromobacterium violaceum ATCC 124726
CSP78 Caulobacter sp.6
CSP501479 Citreicella sp. SE456
CSAL290398 ncbi Chromohalobacter salexigens DSM 30436
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CJAP155077 Cellvibrio japonicus6
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29015
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C5
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80525
CAULO ncbi Caulobacter crescentus CB156
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTHA271848 ncbi Burkholderia thailandensis E2646
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13306
BSUB ncbi Bacillus subtilis subtilis 1685
BSP376 Bradyrhizobium sp.6
BSP36773 Burkholderia sp.6
BPSE320373 ncbi Burkholderia pseudomallei 6686
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962436
BPET94624 Bordetella petrii6
BPER257313 ncbi Bordetella pertussis Tohama I6
BPAR257311 ncbi Bordetella parapertussis 128226
BOVI236 Brucella ovis6
BMEL359391 ncbi Brucella melitensis biovar Abortus 23086
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M6
BMAL320389 ncbi Burkholderia mallei NCTC 102476
BMAL320388 ncbi Burkholderia mallei SAVP16
BMAL243160 ncbi Burkholderia mallei ATCC 233446
BLIC279010 ncbi Bacillus licheniformis ATCC 145805
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1106
BCEN331272 ncbi Burkholderia cenocepacia HI24246
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BCAN483179 ncbi Brucella canis ATCC 233656
BBRO257310 ncbi Bordetella bronchiseptica RB506
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9416
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62928 ncbi Azoarcus sp. BH726
ASP232721 ncbi Acidovorax sp. JS426
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
AMET293826 ncbi Alkaliphilus metalliredigens QYMF5
AHYD196024 Aeromonas hydrophila dhakensis6
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-16
ACRY349163 ncbi Acidiphilium cryptum JF-56
ACAU438753 ncbi Azorhizobium caulinodans ORS 5716
ABOR393595 ncbi Alcanivorax borkumensis SK26
ABAU360910 ncbi Bordetella avium 197N6
AAVE397945 ncbi Acidovorax citrulli AAC00-16


Names of the homologs of the genes in the group in each of these orgs
  G7409   EG11645   EG11311   EG10438   EG10387   EG10317   
ZMOB264203 ZMO1130ZMO1130ZMO1127ZMO0347ZMO1126
YPSE349747 YPSIP31758_3241YPSIP31758_3241YPSIP31758_0386YPSIP31758_3653YPSIP31758_0026YPSIP31758_0385
YPSE273123 YPTB0822YPTB0822YPTB3576YPTB0425YPTB0023YPTB3577
YPES386656 YPDSF_3053YPDSF_3053YPDSF_0261YPDSF_3601YPDSF_3881YPDSF_0260
YPES377628 YPN_0786YPN_0786YPN_3517YPN_3298YPN_0250YPN_3518
YPES360102 YPA_2837YPA_2837YPA_3667YPA_3911YPA_3519YPA_3666
YPES349746 YPANGOLA_A0902YPANGOLA_A0902YPANGOLA_A1211YPANGOLA_A0699YPANGOLA_A0028YPANGOLA_A1212
YPES214092 YPO3308YPO3308YPO3655YPO0373YPO0023YPO3654
YPES187410 Y0880Y0880Y0213Y0630Y3805Y0214
YENT393305 YE0828YE0828YE3816YE0377YE0026YE3817
XORY360094 XOOORF_1723XOOORF_1723XOOORF_1119XOOORF_1721XOOORF_0296XOOORF_4798
XORY342109 XOO2796XOO2796XOO3567XOO2798XOO4225XOO0512
XORY291331 XOO2944XOO2944XOO3787XOO2946XOO4484XOO0548
XFAS405440 XFASM12_0067XFASM12_0067XFASM12_0070XFASM12_1118XFASM12_0976
XFAS183190 PD_0063PD_0063PD_0066PD_1020PD_0811
XFAS160492 XF0086XF0086XF0089XF1849XF1998
XCAM487884 XCC-B100_2541XCC-B100_2541XCC-B100_3590XCC-B100_2543XCC-B100_0208XCC-B100_0538
XCAM316273 XCAORF_1954XCAORF_1954XCAORF_0941XCAORF_1952XCAORF_4341XCAORF_3999
XCAM314565 XC_2513XC_2513XC_3469XC_2515XC_0197XC_0520
XCAM190485 XCC1718XCC1718XCC0763XCC1716XCC0188XCC0508
XAXO190486 XAC1737XAC1737XAC0816XAC1735XAC0207XAC0522
XAUT78245 XAUT_4307XAUT_4307XAUT_4401XAUT_4393XAUT_4400XAUT_4399
VVUL216895 VV1_1590VV1_1590VV1_1232VV1_1294VV1_0891VV1_1231
VVUL196600 VV2807VV2807VV3138VV3071VV0197VV3139
VPAR223926 VP2551VP2551VP2884VP2817VP0119VP2885
VEIS391735 VEIS_0581VEIS_0581VEIS_3027VEIS_0075VEIS_3152VEIS_3026
VCHO345073 VC0395_A0069VC0395_A0069VC0395_A2686VC0395_A2758VC0395_A2320VC0395_A2685
VCHO VC0542VC0542VC0291VC0347VC2748VC0290
TTUR377629 TERTU_2824TERTU_2824TERTU_3084TERTU_3558TERTU_4423TERTU_3085
TDEN292415 TBD_2195TBD_2195TBD_2456TBD_1533TBD_2501TBD_2457
TCRU317025 TCR_1593TCR_1593TCR_0441TCR_1086TCR_0905TCR_0440
STYP99287 STM2830STM1514STM3384STM4361STM4006STM3385
SSP94122 SHEWANA3_3908SHEWANA3_3908SHEWANA3_0399SHEWANA3_0597SHEWANA3_0259SHEWANA3_0398
SSP644076 SCH4B_2277SCH4B_2277SCH4B_2280SCH4B_2287SCH4B_2281SCH4B_2282
SSP292414 TM1040_1366TM1040_1366TM1040_1363TM1040_1356TM1040_1362TM1040_1361
SSON300269 SSO_2844SSO_1591SSO_3401SSO_4357SSO_4041SSO_3402
SSED425104 SSED_4280SSED_4280SSED_4118SSED_0797SSED_0283SSED_4119
SPRO399741 SPRO_0840SPRO_0840SPRO_4423SPRO_0431SPRO_4882SPRO_4424
SPEA398579 SPEA_0223SPEA_0223SPEA_0390SPEA_3540SPEA_3929SPEA_0389
SONE211586 SO_0272SO_0272SO_0394SO_0603SO_4471SO_0393
SMEL266834 SMC01039SMC01039SMC01041SMC01048SMC01042SMC01043
SMED366394 SMED_1086SMED_1086SMED_1088SMED_1095SMED_1089SMED_1090
SLOI323850 SHEW_0198SHEW_0198SHEW_0330SHEW_0566SHEW_3560SHEW_0329
SLAC55218 SL1157_2679SL1157_2679SL1157_2682SL1157_2690SL1157_2683SL1157_2684
SHIGELLA YGADYDEJYHDGHFQGLNLFIS
SHAL458817 SHAL_4097SHAL_4097SHAL_3901SHAL_3634SHAL_0342SHAL_3902
SFLE373384 SFV_2805SFV_1553SFV_3285SFV_4330SFV_3632SFV_3286
SFLE198214 AAN44215.1AAN43147.1AAN44762.1AAN45744.1AAN45374.1AAN44763.1
SENT454169 SEHA_C3016SEHA_C1685SEHA_C3682SEHA_C4779SEHA_C4334SEHA_C3683
SENT321314 SCH_2763SCH_1532SCH_3322SCH_4237SCH_3898SCH_3323
SENT295319 SPA2688SPA1341SPA3251SPA4178SPA3847SPA3252
SENT220341 STY2951STY1547STY3564STY4718STY3875STY3565
SENT209261 T2731T1435T3299T4412T3615T3300
SDYS300267 SDY_2896SDY_1588SDY_3437SDY_4417SDY_3874SDY_3438
SDEN318161 SDEN_0246SDEN_0246SDEN_0445SDEN_3205SDEN_3457SDEN_0444
SDEG203122 SDE_1287SDE_1287SDE_0808SDE_2667SDE_0500SDE_0807
SBOY300268 SBO_2818SBO_1611SBO_3254SBO_4284SBO_3881SBO_3255
SBAL402882 SHEW185_4098SHEW185_4098SHEW185_3964SHEW185_3767SHEW185_0259SHEW185_3965
SBAL399599 SBAL195_4216SBAL195_4216SBAL195_4080SBAL195_3893SBAL195_0267SBAL195_4081
SALA317655 SALA_1279SALA_1279SALA_1277SALA_1272SALA_1276
RSPH349102 RSPH17025_1482RSPH17025_1482RSPH17025_1486RSPH17025_1493RSPH17025_1487RSPH17025_1488
RSPH349101 RSPH17029_1462RSPH17029_1462RSPH17029_1458RSPH17029_1451RSPH17029_1457RSPH17029_1456
RSPH272943 RSP_2833RSP_2833RSP_2836RSP_2843RSP_2837RSP_2838
RSOL267608 RSC2770RSC2770RSC0506RSC1220RSC1260RSC0505
RRUB269796 RRU_A1870RRU_A1870RRU_A1676RRU_A1684RRU_A1677RRU_A1678
RPOM246200 SPO_2092SPO_2092SPO_2089SPO_2081SPO_2088SPO_2087
RPAL316058 RPB_2886RPB_2886RPB_2884RPB_2878RPB_2883RPB_2882
RPAL316057 RPD_2586RPD_2586RPD_2588RPD_2594RPD_2589RPD_2590
RPAL316056 RPC_2574RPC_2574RPC_2576RPC_2582RPC_2577RPC_2578
RPAL316055 RPE_2754RPE_2754RPE_2756RPE_2762RPE_2757RPE_2758
RPAL258594 RPA2589RPA2589RPA2591RPA2597RPA2592RPA2593
RMET266264 RMET_3049RMET_3049RMET_0429RMET_2101RMET_2060RMET_0428
RLEG216596 RL2253RL2253RL2255RL2284RL2256RL2257
RFER338969 RFER_0076RFER_0076RFER_1580RFER_2302RFER_2981RFER_1581
REUT381666 H16_A3156H16_A3156H16_A0503H16_A2359H16_A2333H16_A0502
REUT264198 REUT_A2850REUT_A2850REUT_A0489REUT_A2081REUT_A2055REUT_A0488
RETL347834 RHE_CH01944RHE_CH01944RHE_CH01946RHE_CH01954RHE_CH01947RHE_CH01948
RDEN375451 RD1_2769RD1_2769RD1_2765RD1_2755RD1_2764RD1_2763
PTHE370438 PTH_1300PTH_1300PTH_0259PTH_1345PTH_1422PTH_0508
PSYR223283 PSPTO_4034PSPTO_4034PSPTO_4864PSPTO_4942PSPTO_0353PSPTO_4865
PSYR205918 PSYR_1377PSYR_1377PSYR_4404PSYR_0572PSYR_4821PSYR_4405
PSTU379731 PST_1507PST_1507PST_3277PST_3668PST_0350PST_3278
PSP312153 PNUC_0221PNUC_0221PNUC_1875PNUC_1286PNUC_1254PNUC_1876
PSP296591 BPRO_4476BPRO_4476BPRO_1130BPRO_2603BPRO_1809BPRO_1131
PPUT76869 PPUTGB1_1230PPUTGB1_3003PPUTGB1_4873PPUTGB1_4946PPUTGB1_5100PPUTGB1_4874
PPUT351746 PPUT_4089PPUT_4089PPUT_4695PPUT_4770PPUT_4922PPUT_4696
PPUT160488 PP_1628PP_3298PP_4820PP_4894PP_5047PP_4821
PPRO298386 PBPRA3069PBPRA3069PBPRA3410PBPRA3350PBPRA3494PBPRA3411
PNAP365044 PNAP_3667PNAP_3667PNAP_3360PNAP_1877PNAP_2778PNAP_3359
PMEN399739 PMEN_3016PMEN_2276PMEN_0710PMEN_0635PMEN_4143PMEN_0709
PLUM243265 PLU1248PLU1248PLU4088PLU4581PLU0236PLU4089
PING357804 PING_3382PING_3382PING_3215PING_3238PING_3487PING_3216
PHAL326442 PSHAA0693PSHAA0693PSHAA0347PSHAA0271PSHAA0164PSHAA0346
PFLU220664 PFL_1230PFL_4720PFL_0668PFL_0566PFL_0378PFL_0667
PFLU216595 PFLU1188PFLU1188PFLU0614PFLU0520PFLU0344PFLU0613
PFLU205922 PFL_1174PFL_1174PFL_0615PFL_0523PFL_0340PFL_0614
PENT384676 PSEEN4129PSEEN4129PSEEN4861PSEEN4943PSEEN0387PSEEN4862
PCAR338963 PCAR_2403PCAR_2403PCAR_1992PCAR_1306PCAR_1993PCAR_1994
PATL342610 PATL_3262PATL_3262PATL_0270PATL_3978PATL_1027PATL_0269
PAER208964 PA3618PA2141PA4852PA4944PA5124PA4853
PAER208963 PA14_17520PA14_36880PA14_64180PA14_65310PA14_67670PA14_64190
OCAR504832 OCAR_6092OCAR_6092OCAR_6094OCAR_6100OCAR_6095OCAR_6096
OANT439375 OANT_2068OANT_2068OANT_2070OANT_2208OANT_2071OANT_2072
NWIN323098 NWI_1441NWI_1441NWI_1443NWI_1449NWI_1444NWI_1445
NMUL323848 NMUL_A0015NMUL_A0015NMUL_A0131NMUL_A0447NMUL_A0132
NMEN374833 NMCC_0044NMCC_0044NMCC_1327NMCC_0712NMCC_1326
NMEN272831 NMC0019NMC0019NMC1354NMC0702NMC1353
NMEN122587 NMA0289NMA0289NMA1633NMA0961NMA1632
NMEN122586 NMB_0043NMB_0043NMB_1421NMB_0748NMB_1420
NHAM323097 NHAM_1833NHAM_1833NHAM_1835NHAM_1841NHAM_1836NHAM_1837
NGON242231 NGO2058NGO2058NGO0151NGO0326NGO0152
NEUT335283 NEUT_2521NEUT_2521NEUT_1208NEUT_0961NEUT_1209
NEUR228410 NE2561NE2561NE0874NE1287NE0875
NARO279238 SARO_1923SARO_1923SARO_1926SARO_1931SARO_1927SARO_1928
MTHE264732 MOTH_0735MOTH_0735MOTH_0147MOTH_1116MOTH_1138
MSP409 M446_5926M446_5926M446_5928M446_5942M446_5929M446_5930
MSP400668 MMWYL1_3733MMWYL1_3733MMWYL1_2985MMWYL1_2632MMWYL1_0735MMWYL1_2986
MSP266779 MESO_1622MESO_1622MESO_1620MESO_1613MESO_1619MESO_1618
MPET420662 MPE_A0212MPE_A0212MPE_A0486MPE_A1991MPE_A2074
MMAR394221 MMAR10_1438MMAR10_1438MMAR10_1440MMAR10_1448MMAR10_1441
MMAG342108 AMB2548AMB2548AMB2365AMB2372AMB2366AMB2367
MLOT266835 MLL0394MLL0394MLR0396MLR0402MLR0397MLR0398
MFLA265072 MFLA_0571MFLA_0571MFLA_0351MFLA_1589MFLA_2449MFLA_0350
MEXT419610 MEXT_2816MEXT_2816MEXT_2818MEXT_2824MEXT_2819MEXT_2820
MCAP243233 MCA_0385MCA_0385MCA_1745MCA_1983MCA_2542MCA_1746
MAQU351348 MAQU_2083MAQU_2083MAQU_3448MAQU_2769MAQU_0767MAQU_3449
LCHO395495 LCHO_3921LCHO_3921LCHO_0534LCHO_2863LCHO_3583LCHO_0533
KPNE272620 GKPORF_B2359GKPORF_B0655GKPORF_B3008GKPORF_B3928GKPORF_B3518GKPORF_B3009
JSP375286 MMA_0607MMA_1654MMA_0306MMA_2122MMA_1080MMA_0307
JSP290400 JANN_2233JANN_2233JANN_2236JANN_2244JANN_2237JANN_2238
ILOI283942 IL0743IL0743IL2288IL0333IL2436IL2289
HNEP81032 HNE_2017HNE_2017HNE_2013HNE_2006HNE_2012
HMOD498761 HM1_2373HM1_2373HM1_0661HM1_2580HM1_1290
HHAL349124 HHAL_1656HHAL_1656HHAL_0666HHAL_1216HHAL_2001
HCHE349521 HCH_05233HCH_05233HCH_06009HCH_05383HCH_01034HCH_06010
HARS204773 HEAR0640HEAR0640HEAR0253HEAR1269HEAR0950HEAR0254
GURA351605 GURA_0217GURA_0217GURA_0914GURA_1772GURA_0915GURA_0916
GSUL243231 GSU_0143GSU_0143GSU_1005GSU_1999GSU_1004GSU_1003
GOXY290633 GOX2296GOX2296GOX0469GOX0465GOX0468
GMET269799 GMET_0196GMET_0196GMET_2561GMET_2051GMET_2562GMET_2563
GBET391165 GBCGDNIH1_1192GBCGDNIH1_1192GBCGDNIH1_1228GBCGDNIH1_1123GBCGDNIH1_1227GBCGDNIH1_1226
ESP42895 ENT638_3175ENT638_3132ENT638_3699ENT638_0355ENT638_4097ENT638_3700
ELIT314225 ELI_06300ELI_06300ELI_06285ELI_06260ELI_06280ELI_06275
EFER585054 EFER_0374EFER_1538EFER_3239EFER_4225EFER_3904EFER_3240
ECOO157 YGADYDEJYHDGHFQGLNLFIS
ECOL83334 ECS3557ECS2146ECS4132ECS5148ECS4791ECS4133
ECOL585397 ECED1_3149ECED1_3149ECED1_3919ECED1_4957ECED1_4570ECED1_3920
ECOL585057 ECIAI39_2886ECIAI39_2886ECIAI39_3760ECIAI39_4637ECIAI39_3132ECIAI39_3761
ECOL585056 ECUMN_3021ECUMN_3021ECUMN_3734ECUMN_4705ECUMN_4392ECUMN_3735
ECOL585055 EC55989_2962EC55989_1678EC55989_3674EC55989_4727EC55989_4344EC55989_3675
ECOL585035 ECS88_2963ECS88_2963ECS88_3645ECS88_4758ECS88_4319ECS88_3646
ECOL585034 ECIAI1_2792ECIAI1_1556ECIAI1_3403ECIAI1_4405ECIAI1_4068ECIAI1_3404
ECOL481805 ECOLC_1012ECOLC_2121ECOLC_0446ECOLC_3841ECOLC_4147ECOLC_0445
ECOL469008 ECBD_1025ECBD_2102ECBD_0485ECBD_3862ECBD_4158ECBD_0484
ECOL439855 ECSMS35_2823ECSMS35_2823ECSMS35_3555ECSMS35_4643ECSMS35_4254ECSMS35_3556
ECOL413997 ECB_02550ECB_01496ECB_03118ECB_04039ECB_03754ECB_03119
ECOL409438 ECSE_2948ECSE_1633ECSE_3541ECSE_4469ECSE_4152ECSE_3542
ECOL405955 APECO1_3826APECO1_3826APECO1_3178APECO1_2219APECO1_2593APECO1_3177
ECOL364106 UTI89_C3062UTI89_C3062UTI89_C3702UTI89_C4772UTI89_C4458UTI89_C3703
ECOL362663 ECP_2660ECP_2660ECP_3353ECP_4417ECP_4080ECP_3354
ECOL331111 ECE24377A_2984ECE24377A_1746ECE24377A_3745ECE24377A_4730ECE24377A_4391ECE24377A_3746
ECOL316407 ECK2695:JW2670:B2700ECK1530:JW1530:B1537ECK3247:JW3228:B3260ECK4168:JW4130:B4172ECK3862:JW3840:B3869ECK3248:JW3229:B3261
ECOL199310 C3254C3254C4026C5256C4818C4027
ECAR218491 ECA3370ECA3370ECA0256ECA3934ECA0028ECA0255
DSHI398580 DSHI_1579DSHI_1579DSHI_1576DSHI_1567DSHI_1575DSHI_1574
DRED349161 DRED_1922DRED_1922DRED_0172DRED_1881DRED_2000
DHAF138119 DSY1955DSY1955DSY0217DSY1586DSY4412
DARO159087 DARO_3874DARO_3874DARO_3665DARO_2980DARO_3759DARO_3666
CVIO243365 CV_2370CV_2370CV_0544CV_3533CV_3591CV_0545
CSP78 CAUL_2602CAUL_2602CAUL_2604CAUL_2610CAUL_2605CAUL_2606
CSP501479 CSE45_1376CSE45_1376CSE45_1379CSE45_1387CSE45_1380CSE45_1381
CSAL290398 CSAL_0622CSAL_0622CSAL_2287CSAL_1277CSAL_0245CSAL_2288
CPSY167879 CPS_3682CPS_3682CPS_0550CPS_0325CPS_0398CPS_0551
CJAP155077 CJA_2231CJA_2231CJA_2745CJA_3079CJA_3536CJA_2746
CHYD246194 CHY_1165CHY_1165CHY_2369CHY_1393CHY_2022
CDES477974 DAUD_0842DAUD_0842DAUD_0127DAUD_0557DAUD_0675
CBEI290402 CBEI_4894CBEI_4894CBEI_0103CBEI_2563CBEI_3818
CAULO CC1737CC1737CC1739CC1745CC1740CC1741
BVIE269482 BCEP1808_0602BCEP1808_0602BCEP1808_0658BCEP1808_1734BCEP1808_2227BCEP1808_0657
BTHA271848 BTH_I1186BTH_I1186BTH_I1252BTH_I2239BTH_I1845BTH_I1251
BSUI470137 BSUIS_A1170BSUIS_A1170BSUIS_A1168BSUIS_A1160BSUIS_A1166
BSUI204722 BR_1121BR_1121BR_1119BR_1111BR_1118BR_1117
BSUB BSU16930BSU16930BSU00810BSU17340BSU13530
BSP376 BRADO3870BRADO3870BRADO3868BRADO3855BRADO3867BRADO3866
BSP36773 BCEP18194_A3710BCEP18194_A3710BCEP18194_A3779BCEP18194_A5108BCEP18194_A5457BCEP18194_A3778
BPSE320373 BURPS668_3442BURPS668_3442BURPS668_3360BURPS668_2184BURPS668_2633BURPS668_3361
BPSE320372 BURPS1710B_A3754BURPS1710B_A3754BURPS1710B_A3677BURPS1710B_A2551BURPS1710B_A3000BURPS1710B_A3678
BPSE272560 BPSL2962BPSL2962BPSL2894BPSL1518BPSL2317BPSL2895
BPET94624 BPET3953BPET3953BPET0908BPET2025BPET2275BPET0907
BPER257313 BP3489BP3489BP3414BP2193BP1597BP3415
BPAR257311 BPP0862BPP0862BPP3564BPP2849BPP2987BPP3565
BOVI236 GBOORF1121GBOORF1121GBOORF1119GBOORF1112GBOORF1118GBOORF1117
BMEL359391 BAB1_1144BAB1_1144BAB1_1142BAB1_1134BAB1_1141BAB1_1140
BMEL224914 BMEI0862BMEI0862BMEI0864BMEI0872BMEI0865BMEI0866
BMAL320389 BMA10247_3306BMA10247_3306BMA10247_2538BMA10247_1101BMA10247_1523BMA10247_2537
BMAL320388 BMASAVP1_A0399BMASAVP1_A0399BMASAVP1_A0272BMASAVP1_A1829BMASAVP1_A2251BMASAVP1_A0271
BMAL243160 BMA_2480BMA_2480BMA_2358BMA_1340BMA_1741BMA_2357
BLIC279010 BL05163BL05163BL03311BL05175BL03536
BJAP224911 BLL4484BLL4484BLR4486BSR4491BLR4487BLR4488
BCEN331272 BCEN2424_0628BCEN2424_0628BCEN2424_0693BCEN2424_1807BCEN2424_2148BCEN2424_0692
BCEN331271 BCEN_0145BCEN_0145BCEN_0209BCEN_6272BCEN_5929
BCAN483179 BCAN_A1140BCAN_A1140BCAN_A1138BCAN_A1130BCAN_A1137BCAN_A1136
BBRO257310 BB0956BB0956BB3999BB3170BB2953BB4000
BAMB398577 BAMMC406_0553BAMMC406_0553BAMMC406_0612BAMMC406_1718BAMMC406_2058BAMMC406_0611
BAMB339670 BAMB_0529BAMB_0529BAMB_0586BAMB_1745BAMB_2185BAMB_0585
BABO262698 BRUAB1_1127BRUAB1_1127BRUAB1_1125BRUAB1_1117BRUAB1_1124BRUAB1_1123
ASP76114 EBA3399EBA3399EBA1152EBA1255EBA4117
ASP62928 AZO0508AZO0508AZO2892AZO0932AZO0736AZO2893
ASP232721 AJS_0354AJS_0354AJS_3586AJS_1175AJS_1191AJS_3585
ASAL382245 ASA_3808ASA_3808ASA_0808ASA_3369ASA_4122ASA_0807
AORE350688 CLOS_1943CLOS_1943CLOS_0447CLOS_1551CLOS_1078
AMET293826 AMET_1704AMET_1704AMET_4527AMET_2541AMET_3256
AHYD196024 AHA_3717AHA_3717AHA_3510AHA_0924AHA_0275AHA_3511
AFER243159 AFE_2116AFE_2116AFE_1202AFE_0207AFE_2834
AEHR187272 MLG_1484MLG_1484MLG_1399MLG_0573MLG_0015MLG_0610
ACRY349163 ACRY_1911ACRY_1911ACRY_2032ACRY_1762ACRY_2033ACRY_2034
ACAU438753 AZC_3090AZC_3090AZC_3088AZC_3080AZC_3087AZC_3086
ABOR393595 ABO_1802ABO_1802ABO_2013ABO_2203ABO_2260ABO_2014
ABAU360910 BAV0574BAV0574BAV2774BAV2338BAV1930BAV2775
AAVE397945 AAVE_0429AAVE_0429AAVE_0894AAVE_1429AAVE_1444AAVE_0895


Organism features enriched in list (features available for 205 out of the 220 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00048591992
Disease:Brucellosis 0.005206655
Disease:Bubonic_plague 0.001801666
Disease:Dysentery 0.001801666
Disease:Gastroenteritis 0.00204611013
Endospores:No 1.086e-1433211
Endospores:Yes 0.0013547953
GC_Content_Range4:0-40 3.957e-464213
GC_Content_Range4:40-60 2.031e-9112224
GC_Content_Range4:60-100 5.105e-1489145
GC_Content_Range7:0-30 1.411e-8147
GC_Content_Range7:30-40 1.532e-333166
GC_Content_Range7:50-60 4.343e-1472107
GC_Content_Range7:60-70 2.102e-1789134
Genome_Size_Range5:2-4 0.000126350197
Genome_Size_Range5:4-6 6.406e-30126184
Genome_Size_Range5:6-10 0.00007162947
Genome_Size_Range9:2-3 0.000028024120
Genome_Size_Range9:4-5 4.142e-126496
Genome_Size_Range9:5-6 1.875e-136288
Genome_Size_Range9:6-8 2.808e-62738
Gram_Stain:Gram_Neg 6.642e-33182333
Gram_Stain:Gram_Pos 1.465e-228150
Habitat:Host-associated 0.000807656206
Habitat:Multiple 0.000377680178
Habitat:Specialized 0.0013547953
Motility:No 1.379e-1911151
Motility:Yes 1.142e-16141267
Optimal_temp.:- 0.0088955102257
Optimal_temp.:25-30 1.351e-91919
Optimal_temp.:37 0.000422923106
Oxygen_Req:Anaerobic 2.172e-813102
Oxygen_Req:Facultative 0.000020593201
Pathogenic_in:Plant 0.00220171115
Shape:Coccus 1.663e-61182
Shape:Rod 8.874e-18169347
Shape:Sphere 0.0024426119
Shape:Spiral 0.0012746434
Temp._range:Hyperthermophilic 0.0004878123
Temp._range:Mesophilic 0.0051484177473
Temp._range:Thermophilic 0.0009122435



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 193
Effective number of orgs (counting one per cluster within 468 clusters): 149

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 131
UURE95664 Ureaplasma urealyticum serovar 101
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278151
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX1
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4401
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-61
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-141
SPNE171101 ncbi Streptococcus pneumoniae R61
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae1
SMUT210007 ncbi Streptococcus mutans UA1591
SMAR399550 ncbi Staphylothermus marinus F10
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SCO ncbi Streptomyces coelicolor A3(2)1
SAVE227882 ncbi Streptomyces avermitilis MA-46801
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington1
RSP357808 ncbi Roseiflexus sp. RS-11
RSP101510 ncbi Rhodococcus jostii RHA10
RRIC452659 ncbi Rickettsia rickettsii Iowa1
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal21
RCON272944 ncbi Rickettsia conorii Malish 71
RCAS383372 ncbi Roseiflexus castenholzii DSM 139411
RCAN293613 ncbi Rickettsia canadensis McKiel1
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RBEL336407 ncbi Rickettsia bellii RML369-C1
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
NSP35761 Nocardioides sp.1
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPEN272633 ncbi Mycoplasma penetrans HF-21
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G371
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LSPH444177 ncbi Lysinibacillus sphaericus C3-411
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-001
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LACI272621 ncbi Lactobacillus acidophilus NCFM1
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI31
FMAG334413 ncbi Finegoldia magna ATCC 293281
FALN326424 ncbi Frankia alni ACN14a1
DSP216389 ncbi Dehalococcoides sp. BAV11
DRAD243230 ncbi Deinococcus radiodurans R10
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10621
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-401
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CCON360104 ncbi Campylobacter concisus 138261
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN1
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1350
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)1
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BCIC186490 Candidatus Baumannia cicadellinicola1
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5831
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG11
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
AAUR290340 ncbi Arthrobacter aurescens TC11


Names of the homologs of the genes in the group in each of these orgs
  G7409   EG11645   EG11311   EG10438   EG10387   EG10317   
WPIP955 WD_0025
WPIP80849 WB_0699
UURE95667 UU083
UURE95664 UUR10_0089
UPAR505682 UPA3_0082
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852
TTHE262724
TPEN368408
TPAL243276
TKOD69014
TFUS269800 TFU_0797
TDEN243275 TDE_1706
TACI273075
STRO369723 STROP_1398
STOK273063
STHE322159 STER_0231
STHE299768 STR0181
STHE264199 STU0181
SSUI391296 SSU98_1975
SSUI391295 SSU05_1970
SSOL273057
SSAP342451 SSP1456
SPYO370554 MGAS10750_SPY0111
SPYO370553 MGAS2096_SPY0107
SPYO370552 MGAS10270_SPY0106
SPYO370551 MGAS9429_SPY0105
SPYO319701 M28_SPY0102
SPYO293653 M5005_SPY0104
SPYO286636 M6_SPY0153
SPYO198466 SPYM3_0095
SPYO193567 SPS0097
SPYO186103 SPYM18_0122
SPYO160490 SPY0122
SPNE487214 SPH_2384
SPNE487213 SPT_2204
SPNE171101 SPR1994
SPNE170187
SPNE1313 SPJ_2216
SMUT210007 SMU_187C
SMAR399550
SHAE279808 SH1605
SEPI176280 SE_0982
SEPI176279 SERP0871
SCO SCO2497
SAVE227882 SAV5649
SAUR93062 SACOL1324
SAUR93061 SAOUHSC_01281
SAUR426430 NWMN_1212
SAUR418127 SAHV_1294
SAUR367830 SAUSA300_1196
SAUR359787 SAURJH1_1389
SAUR359786 SAURJH9_1363
SAUR282459 SAS1237
SAUR282458 SAR1279
SAUR273036 SAB1165
SAUR196620 MW1187
SAUR158879 SA1145
SAUR158878 SAV1305
SAGA211110 GBS1866
SAGA208435 SAG_1825
SAGA205921 SAK_1845
SACI330779
RTYP257363 RT0010
RSP357808 ROSERS_3026
RSP101510
RRIC452659 RRIOWA_0019
RRIC392021 A1G_00080
RPRO272947 RP011
RMAS416276
RFEL315456 RF_0012
RCON272944 RC0011
RCAS383372 RCAS_2148
RCAN293613 A1E_00045
RBEL391896 A1I_01285
RBEL336407 RBE_1199
RAKA293614 A1C_00320
PTOR263820
PMAR59920 PMN2A_1623
PISL384616
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PACN267747
PABY272844
NSP35761 NOCA_1942
NSEN222891 NSE_0373
MTHE349307
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPEN272633 MYPE6400
MMYC272632 MSC_0068
MMOB267748
MMAZ192952 MM1343
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273 MG_115
MCAP340047 MCAP_0837
MBUR259564 MBUR_2154
MBAR269797 MBAR_A1003
MART243272
MAEO419665
MACE188937 MA0035
MABS561007 MAB_2443
LXYL281090 LXX08490
LSPH444177 BSPH_0100
LSAK314315 LSA1595
LMES203120
LLAC272623 L19272
LLAC272622 LACR_2221
LJOH257314 LJ_0286
LINT363253 LI1078
LHEL405566 LHV_0298
LGAS324831 LGAS_0279
LDEL390333 LDB0372
LDEL321956 LBUL_0327
LACI272621 LBA0280
KRAD266940
IHOS453591
HBUT415426
FSP1855 FRANEAN1_1207
FSP106370 FRANCCI3_3538
FMAG334413 FMG_1621
FALN326424 FRAAL5732
DSP216389 DEHABAV1_1102
DRAD243230
DGEO319795
CVES412965
CTRA471473
CTRA471472
CSUL444179
CPRO264201 PC1365
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992 SAR11_0943
CMUR243161
CMIC443906 CMM_1584
CMIC31964 CMS1555
CMET456442
CMAQ397948
CKOR374847
CJEJ407148 C8J_0116
CJEJ360109 JJD26997_0136
CJEJ354242 CJJ81176_0158
CJEJ195099 CJE_0118
CJEJ192222 CJ0123C
CGLU196627 CG2841
CFET360106 CFF8240_0608
CFEL264202
CDIP257309 DIP1903
CCON360104 CCC13826_0279
CCAV227941
CBLO291272 BPEN_082
CBLO203907
CABO218497
BTUR314724
BSP107806 BU400
BLON206672
BHER314723
BGAR290434
BCIC186490 BCI_0581
BBUR224326
BBAC360095 BARBAKC583_0624
BAPH372461 BCC_252
BAPH198804 BUSG387
BAFZ390236
AYEL322098
AURANTIMONAS
APER272557
ANAE240017 ANA_0570
AFUL224325
ACEL351607 ACEL_1497
AAUR290340 AAUR_1486


Organism features enriched in list (features available for 181 out of the 193 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00708573892
Arrangment:Clusters 1.348e-91717
Arrangment:Singles 0.000774272286
Disease:Pharyngitis 0.000077488
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 2.083e-61111
Disease:Wide_range_of_infections 2.083e-61111
Disease:bronchitis_and_pneumonitis 0.000077488
Endospores:No 1.560e-18113211
Endospores:Yes 0.0003404653
GC_Content_Range4:0-40 4.748e-18113213
GC_Content_Range4:40-60 2.026e-645224
GC_Content_Range4:60-100 1.181e-623145
GC_Content_Range7:0-30 0.00005992747
GC_Content_Range7:30-40 1.472e-1186166
GC_Content_Range7:50-60 1.658e-614107
GC_Content_Range7:60-70 5.399e-916134
Genome_Size_Range5:0-2 2.293e-32108155
Genome_Size_Range5:4-6 3.948e-2211184
Genome_Size_Range5:6-10 0.0001198447
Genome_Size_Range9:0-1 1.078e-112527
Genome_Size_Range9:1-2 1.329e-1983128
Genome_Size_Range9:2-3 0.001832750120
Genome_Size_Range9:3-4 4.377e-6877
Genome_Size_Range9:4-5 2.045e-12496
Genome_Size_Range9:5-6 2.314e-8788
Genome_Size_Range9:6-8 7.787e-6138
Gram_Stain:Gram_Neg 4.887e-2053333
Gram_Stain:Gram_Pos 6.600e-873150
Habitat:Host-associated 1.563e-689206
Habitat:Multiple 0.000054836178
Motility:No 9.896e-1179151
Motility:Yes 2.853e-1245267
Optimal_temp.:- 0.000717463257
Optimal_temp.:30-35 0.004121567
Optimal_temp.:30-37 4.576e-61518
Optimal_temp.:85 0.009078844
Oxygen_Req:Aerobic 0.000861142185
Pathogenic_in:Human 0.002755680213
Pathogenic_in:Swine 0.002775455
Shape:Coccus 1.320e-165982
Shape:Irregular_coccus 1.079e-61517
Shape:Rod 4.576e-2650347
Shape:Sphere 0.00010971419
Temp._range:Hyperthermophilic 0.00001731723



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951700.7325
GLYCOCAT-PWY (glycogen degradation I)2461910.7154
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491420.7037
PWY-5918 (heme biosynthesis I)2721930.6565
TYRFUMCAT-PWY (tyrosine degradation I)1841530.6480
PWY-4041 (γ-glutamyl cycle)2791940.6448
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002010.6389
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251700.6331
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861930.6201
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181640.6127
PWY-5028 (histidine degradation II)1301200.6124
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831460.6000
PWY-1269 (CMP-KDO biosynthesis I)3252030.5932
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392070.5886
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911890.5805
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961900.5748
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911460.5722
PWY-5148 (acyl-CoA hydrolysis)2271620.5711
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491710.5696
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491710.5696
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551720.5597
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482050.5554
P344-PWY (acrylonitrile degradation)2101520.5530
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901830.5426
AST-PWY (arginine degradation II (AST pathway))1201060.5418
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982180.5415
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351140.5407
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761340.5360
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))1381150.5359
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561240.5342
PWY-5913 (TCA cycle variation IV)3011850.5290
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652060.5257
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001840.5247
GLUCONSUPER-PWY (D-gluconate degradation)2291560.5233
REDCITCYC (TCA cycle variation II)1741310.5207
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291930.5168
GALACTCAT-PWY (D-galactonate degradation)104940.5158
GALACTARDEG-PWY (D-galactarate degradation I)1511180.5069
PWY-5340 (sulfate activation for sulfonation)3852090.5049
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111840.4982
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911340.4848
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222160.4812
GLUCARDEG-PWY (D-glucarate degradation I)1521150.4795
PWY-46 (putrescine biosynthesis III)1381080.4793
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96850.4753
P601-PWY (D-camphor degradation)95830.4620
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)1351040.4592
PWY-5386 (methylglyoxal degradation I)3051760.4588
PWY-3162 (tryptophan degradation V (side chain pathway))94820.4579
PWY-6268 (adenosylcobalamin salvage from cobalamin)3171800.4572
DAPLYSINESYN-PWY (lysine biosynthesis I)3421880.4538
PWY-5938 ((R)-acetoin biosynthesis I)3761980.4478
ARGSYNBSUB-PWY (arginine biosynthesis II (acetyl cycle))3832000.4469
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891680.4441
PWY-6087 (4-chlorocatechol degradation)2231420.4431
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162090.4428
PWY-561 (superpathway of glyoxylate cycle)1621150.4425
PWY-5964 (molybdopterin guanine dinucleotide biosynthesis)2901680.4416
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112900.4412
PWY0-862 (cis-dodecenoyl biosynthesis)3431860.4380
PWY-2361 (3-oxoadipate degradation)82730.4375
PWY1-3 (polyhydroxybutyrate biosynthesis)115910.4362
GLYOXYLATE-BYPASS (glyoxylate cycle)1691170.4330
GLYSYN-THR-PWY (glycine biosynthesis IV)2151370.4315
GALACTITOLCAT-PWY (galactitol degradation)73670.4304
PWY-5084 (2-ketoglutarate dehydrogenase complex)3261790.4295
VALDEG-PWY (valine degradation I)2901660.4282
PWY-4302 (aerobic respiration -- electron donor III)2141360.4274
2ASDEG-PWY (orthanilate degradation)72660.4262
PWY0-981 (taurine degradation IV)106850.4251
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3741940.4246
PWY-6193 (3-chlorocatechol degradation II (ortho))1941270.4242
PWY-6389 ((S)-acetoin biosynthesis)3681920.4238
PWY-5507 (adenosylcobalamin biosynthesis I (early cobalt insertion))2991680.4196
PWY-5188 (tetrapyrrole biosynthesis I)4392120.4194
BRANCHED-CHAIN-AA-SYN-PWY (superpathway of leucine, valine, and isoleucine biosynthesis)4582160.4130
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation)2121330.4121
P381-PWY (adenosylcobalamin biosynthesis II (late cobalt incorporation))3711910.4105
PWY-5194 (siroheme biosynthesis)3121710.4085
LIPASYN-PWY (phospholipases)2121320.4050
PWY-5986 (ammonium transport)3611870.4049
PWY-5025 (IAA biosynthesis IV)92750.4024
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94760.4016
PWY0-501 (lipoate biosynthesis and incorporation I)3851940.4012
PWY-5782 (2-keto-L-gulonate biosynthesis)85710.4010
PWY-5521 (L-ascorbate biosynthesis V)85710.4010



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11645   EG11311   EG10438   EG10387   EG10317   
G74090.9999990.9989750.9986990.9987170.998924
EG116450.9987960.9986410.9986720.998829
EG113110.9986420.9993220.999933
EG104380.9991220.998967
EG103870.999371
EG10317



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PAIRWISE BLAST SCORES:

  G7409   EG11645   EG11311   EG10438   EG10387   EG10317   
G74090.0f02.4e-24----
EG116456.5e-150.0f0----
EG11311--0.0f0---
EG10438---0.0f0--
EG10387----0.0f0-
EG10317-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10317 EG11311 (centered at EG10317)
EG10387 (centered at EG10387)
EG10438 (centered at EG10438)
EG11645 (centered at EG11645)
G7409 (centered at G7409)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G7409   EG11645   EG11311   EG10438   EG10387   EG10317   
378/623376/623414/623332/623251/623235/623
AAEO224324:0:Tyes13371337-0--
AAUR290340:2:Tyes--0---
AAVE397945:0:Tyes00456984999457
ABAC204669:0:Tyes2128-04348727-
ABAU360910:0:Tyes002205177113552206
ABOR393595:0:Tyes00214406463215
ABUT367737:0:Tyes00----
ACAU438753:0:Tyes10108076
ACEL351607:0:Tyes0-----
ACRY349163:8:Tyes1541542770278279
ADEH290397:0:Tyes1723-1902-01903
AEHR187272:0:Tyes1459145913745530590
AFER243159:0:Tyes18811881-97702588
AHYD196024:0:Tyes33283328314763403148
ALAI441768:0:Tyes-01176---
AMAR234826:0:Tyes-5670---
AMAR329726:9:Tyes5635630---
AMET293826:0:Tyes0028278321539-
ANAE240017:0:Tyes--0---
AORE350688:0:Tyes1516151601101628-
APHA212042:0:Tyes-6430---
APLE416269:0:Tyes--01811-1
APLE434271:0:Tno--01834-1
ASAL382245:5:Tyes288528851245431900
ASP1667:3:Tyes123-0---
ASP232721:2:Tyes0031348078283133
ASP62928:0:Tyes0024304322332431
ASP62977:0:Tyes--10979260993
ASP76114:2:Tyes133313330681751-
AVAR240292:3:Tyes144514450-705-
BABO262698:1:Tno997065
BAMB339670:3:Tno00581243169657
BAMB398577:3:Tno00591176152458
BAMY326423:0:Tyes1582-016191236-
BANT260799:0:Tno--03532--
BANT261594:2:Tno--03441--
BANT568206:2:Tyes--06382946-
BANT592021:2:Tno--03649--
BAPH198804:0:Tyes-----0
BAPH372461:0:Tyes-----0
BBAC264462:0:Tyes435435--27770
BBAC360095:0:Tyes---0--
BBRO257310:0:Tyes003073222920113074
BCAN483179:1:Tno10108076
BCEN331271:0:Tno---3550-
BCEN331271:2:Tno0065---
BCEN331272:3:Tyes00651177151864
BCER226900:1:Tyes--035581356-
BCER288681:0:Tno--034551339-
BCER315749:1:Tyes--021822107-
BCER405917:1:Tyes--034611433-
BCER572264:1:Tno--035581291-
BCIC186490:0:Tyes---0--
BCLA66692:0:Tyes--02120--
BFRA272559:1:Tyes001831---
BFRA295405:0:Tno8518513036-0-
BHAL272558:0:Tyes--023421779-
BHEN283166:0:Tyes00-153--
BJAP224911:0:Fyes002734
BLIC279010:0:Tyes17681768018111372-
BMAL243160:1:Tno101910199110358910
BMAL320388:1:Tno1261261152819370
BMAL320389:1:Tyes21592159140404111403
BMEL224914:1:Tno0021034
BMEL359391:1:Tno997065
BOVI236:1:Tyes886054
BPAR257311:0:Tno002574189320182575
BPER257313:0:Tyes17101710164152001642
BPET94624:0:Tyes308230821112313730
BPSE272560:1:Tyes14481448138007931381
BPSE320372:1:Tno10981098102103591022
BPSE320373:1:Tno12031203112104281122
BPUM315750:0:Tyes1568-015961262-
BQUI283165:0:Tyes00-25--
BSP107806:2:Tyes-----0
BSP36773:2:Tyes00701419178169
BSP376:0:Tyes15151301211
BSUB:0:Tyes17431743017841384-
BSUI204722:1:Tyes10108076
BSUI470137:1:Tno8860-5
BTHA271848:1:Tno0066102964465
BTHE226186:0:Tyes002204---
BTHU281309:1:Tno--033491245-
BTHU412694:1:Tno--031571235-
BTRI382640:1:Tyes00-414--
BVIE269482:7:Tyes00561124161555
BWEI315730:4:Tyes--03415--
BXEN266265:0:Tyes00----
CACE272562:1:Tyes1760176013800--
CAULO:0:Tyes002834
CBEI290402:0:Tyes47094709024273643-
CBLO291272:0:Tno---0--
CBOT36826:1:Tno0032761553--
CBOT441770:0:Tyes0032341448--
CBOT441771:0:Tno0030971445--
CBOT441772:1:Tno0033101482--
CBOT498213:1:Tno0033231505--
CBOT508765:1:Tyes3149314901583--
CBOT515621:2:Tyes0034721678--
CBOT536232:0:Tno0035841626--
CBUR227377:1:Tyes680680---0
CBUR360115:1:Tno416416---0
CBUR434922:2:Tno00---724
CCHL340177:0:Tyes0097---
CCON360104:2:Tyes0-----
CCUR360105:0:Tyes00----
CDES477974:0:Tyes6716710413524-
CDIF272563:1:Tyes002170571--
CDIP257309:0:Tyes--0---
CEFF196164:0:Fyes-01375---
CFET360106:0:Tyes0-----
CGLU196627:0:Tyes--0---
CHOM360107:1:Tyes00----
CHUT269798:0:Tyes213221320---
CHYD246194:0:Tyes001158217833-
CJAP155077:0:Tyes005128411297513
CJEI306537:0:Tyes-7860---
CJEJ192222:0:Tyes--0---
CJEJ195099:0:Tno--0---
CJEJ354242:2:Tyes--0---
CJEJ360109:0:Tyes--0---
CJEJ407148:0:Tno--0---
CKLU431943:1:Tyes3195319501380--
CMIC31964:2:Tyes--0---
CMIC443906:2:Tyes--0---
CNOV386415:0:Tyes00951142--
CPEL335992:0:Tyes-0----
CPER195102:1:Tyes0024161043--
CPER195103:0:Tno0025641215--
CPER289380:3:Tyes0022591028--
CPHY357809:0:Tyes200720070---
CPRO264201:0:Fyes----0-
CPSY167879:0:Tyes32603260217065218
CRUT413404:0:Tyes00---491
CSAL290398:0:Tyes3883882092105602093
CSP501479:8:Fyes0031145
CSP78:2:Tyes002834
CTEP194439:0:Tyes98980---
CTET212717:0:Tyes1381380---
CVIO243365:0:Tyes187318730307131331
DARO159087:0:Tyes8978976870783688
DDES207559:0:Tyes13661366--0-
DETH243164:0:Tyes1125---0-
DHAF138119:0:Tyes17751775014034247-
DNOD246195:0:Tyes--0171--
DOLE96561:0:Tyes115711572473-0-
DPSY177439:2:Tyes6666--0-
DRED349161:0:Tyes17671767017271842-
DSHI398580:5:Tyes12129087
DSP216389:0:Tyes0-----
DSP255470:0:Tno0---329-
DVUL882:1:Tyes00--2336-
ECAN269484:0:Tyes-6240---
ECAR218491:0:Tyes3386338624139570240
ECHA205920:0:Tyes-0716---
ECOL199310:0:Tno0075719691538758
ECOL316407:0:Tno115801711261918581712
ECOL331111:6:Tno118701923286425451924
ECOL362663:0:Tno0069217401410693
ECOL364106:1:Tno0064016941383641
ECOL405955:2:Tyes0063016211235631
ECOL409438:6:Tyes134301944291125771945
ECOL413997:0:Tno106701639258522881640
ECOL439855:4:Tno0070417421372705
ECOL469008:0:Tno54416211336236700
ECOL481805:0:Tno56916781340237170
ECOL585034:0:Tno122201826278424661827
ECOL585035:0:Tno0066517211312666
ECOL585055:0:Tno127001967298926241968
ECOL585056:2:Tno0070416641356705
ECOL585057:0:Tno008861758255887
ECOL585397:0:Tno0075517631390756
ECOL83334:0:Tno145302039309727252040
ECOLI:0:Tno118801754268423741755
ECOO157:0:Tno168302276329729712277
EFAE226185:3:Tyes2727-0---
EFER585054:1:Tyes011502860380934982861
ELIT314225:0:Tyes885043
ERUM254945:0:Tyes-6200---
ERUM302409:0:Tno-6150---
ESP42895:1:Tyes284928013374037813375
FALN326424:0:Tyes0-----
FJOH376686:0:Tyes393539350---
FMAG334413:1:Tyes-0----
FNOD381764:0:Tyes14941494-0--
FNUC190304:0:Tyes00----
FPHI484022:1:Tyes--3580--
FRANT:0:Tno--0100--
FSP106370:0:Tyes0-----
FSP1855:0:Tyes0-----
FSUC59374:0:Tyes00----
FTUL351581:0:Tno--660--
FTUL393011:0:Tno--580--
FTUL393115:0:Tyes--0100--
FTUL401614:0:Tyes--063--
FTUL418136:0:Tno--062--
FTUL458234:0:Tno--560--
GBET391165:0:Tyes69691050104103
GFOR411154:0:Tyes-01087---
GKAU235909:1:Tyes--01304935-
GMET269799:1:Tyes002372187023732374
GOXY290633:5:Tyes1822182240-3
GSUL243231:0:Tyes008561844855854
GTHE420246:1:Tyes--01080750-
GURA351605:0:Tyes006941547695696
GVIO251221:0:Tyes141314130---
HACI382638:1:Tyes00----
HARS204773:0:Tyes35635609586501
HAUR316274:2:Tyes173817380-2811-
HCHE349521:0:Tyes404040404799418404800
HDUC233412:0:Tyes--0246-1
HHAL349124:0:Tyes995995-05611346
HHEP235279:0:Tyes00----
HINF281310:0:Tyes--5720-573
HINF374930:0:Tyes--10610-1060
HINF71421:0:Tno--5640-565
HMAR272569:8:Tyes00----
HMOD498761:0:Tyes1704170462619100-
HMUK485914:1:Tyes00----
HNEP81032:0:Tyes1111706-
HPY:0:Tno00----
HPYL357544:1:Tyes00----
HPYL85963:0:Tno00----
HSAL478009:4:Tyes00----
HSOM205914:1:Tyes--1542-0
HSOM228400:0:Tno--5350-536
HSP64091:2:Tno00----
HWAL362976:1:Tyes00----
ILOI283942:0:Tyes4184182006021562007
JSP290400:1:Tyes0031145
JSP375286:0:Tyes3101377018477861
KPNE272620:2:Tyes167602318320228182319
LACI272621:0:Tyes--0---
LBIF355278:2:Tyes15591559-0--
LBIF456481:2:Tno15981598-0--
LBOR355276:1:Tyes00-604--
LBOR355277:1:Tno00-446--
LBRE387344:2:Tyes-6620---
LCAS321967:1:Tyes-01567---
LCHO395495:0:Tyes341734171236030740
LDEL321956:0:Tyes--0---
LDEL390333:0:Tyes--0---
LGAS324831:0:Tyes--0---
LHEL405566:0:Tyes--0---
LINN272626:1:Tno--01086--
LINT189518:1:Tyes172172-02399-
LINT267671:1:Tno00-145996-
LINT363253:3:Tyes----0-
LJOH257314:0:Tyes--0---
LLAC272622:5:Tyes--0---
LLAC272623:0:Tyes--0---
LMON169963:0:Tno--01084--
LMON265669:0:Tyes--01062--
LPLA220668:0:Tyes-15240---
LPNE272624:0:Tno17911791-0-532
LPNE297245:1:Fno17441744-0-575
LPNE297246:1:Fyes17511751-0-595
LPNE400673:0:Tno12121212-0-2692
LREU557436:0:Tyes-2620---
LSAK314315:0:Tyes--0---
LSPH444177:1:Tyes--0---
LWEL386043:0:Tyes--01119--
LXYL281090:0:Tyes--0---
MABS561007:1:Tyes0-----
MACE188937:0:Tyes--0---
MAER449447:0:Tyes00----
MAQU351348:2:Tyes129912992655198002656
MAVI243243:0:Tyes00----
MBAR269797:1:Tyes--0---
MBOV233413:0:Tno00----
MBOV410289:0:Tno00----
MBUR259564:0:Tyes--0---
MCAP243233:0:Tyes001270150120391271
MCAP340047:0:Tyes--0---
MEXT419610:0:Tyes002834
MFLA265072:0:Tyes2202201123620930
MFLO265311:0:Tyes-1840---
MGEN243273:0:Tyes-0----
MGIL350054:3:Tyes163116310---
MLEP272631:0:Tyes00----
MLOT266835:2:Tyes002834
MMAG342108:0:Tyes1831830712
MMAR394221:0:Tyes002103-
MMAZ192952:0:Tyes--0---
MMYC272632:0:Tyes--0---
MPEN272633:0:Tyes-0----
MPET420662:1:Tyes0027417751856-
MPNE272634:0:Tyes00----
MSME246196:0:Tyes00----
MSP164756:1:Tno00----
MSP164757:0:Tno00----
MSP189918:2:Tyes00----
MSP266779:3:Tyes997065
MSP400668:0:Tyes304530452287193502288
MSP409:2:Tyes0021534
MSUC221988:0:Tyes--11014-0
MTBCDC:0:Tno00----
MTBRV:0:Tno00----
MTHE264732:0:Tyes5685680945967-
MTUB336982:0:Tno00----
MTUB419947:0:Tyes00----
MVAN350058:0:Tyes00----
MXAN246197:0:Tyes368536852869-0-
NARO279238:0:Tyes003845
NEUR228410:0:Tyes171117110416-1
NEUT335283:2:Tyes152915292450-246
NFAR247156:2:Tyes-5680---
NGON242231:0:Tyes175617560163-1
NHAM323097:2:Tyes002834
NMEN122586:0:Tno001321679-1320
NMEN122587:0:Tyes001249629-1248
NMEN272831:0:Tno001181624-1180
NMEN374833:0:Tno001262654-1261
NMUL323848:3:Tyes00116431-117
NOCE323261:1:Tyes00-1638-124
NPHA348780:2:Tyes00----
NSEN222891:0:Tyes--0---
NSP103690:6:Tyes361936190---
NSP35761:1:Tyes--0---
NSP387092:0:Tyes90900---
NWIN323098:0:Tyes002834
OANT439375:5:Tyes00214334
OCAR504832:0:Tyes002834
OIHE221109:0:Tyes---045-
OTSU357244:0:Fyes00725---
PAER208963:0:Tyes015773822391841003823
PAER208964:0:Tno149902754284830282755
PARC259536:0:Tyes--3790-552
PATL342610:0:Tyes30233023137367600
PCAR338963:0:Tyes111411146990700701
PCRY335284:1:Tyes--0413634568
PDIS435591:0:Tyes002640---
PENT384676:0:Tyes350635064209428504210
PFLU205922:0:Tyes8418412771830276
PFLU216595:1:Tyes8218212581700257
PFLU220664:0:Tyes83842752881880287
PGIN242619:0:Tyes148514850---
PHAL326442:1:Tyes5285281821050181
PING357804:0:Tyes1661660232681
PINT246198:0:Tyes00----
PINT246198:1:Tyes--0---
PLUM243265:0:Fyes102410243908441303909
PLUT319225:0:Tyes166016600---
PMAR146891:0:Tyes00----
PMAR167539:0:Tyes00----
PMAR167540:0:Tyes00772---
PMAR167542:0:Tyes00----
PMAR167546:0:Tyes00----
PMAR167555:0:Tyes00----
PMAR59920:0:Tno0-----
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