CANDIDATE ID: 449

CANDIDATE ID: 449

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9916253e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG11311 (dusB) (b3260)
   Products of gene:
     - EG11311-MONOMER (tRNA dihydrouridine synthase)
       Reactions:
        a tRNA  ->  tRNA containing 5,6-dihydrouridine

- EG10438 (hfq) (b4172)
   Products of gene:
     - EG10438-MONOMER (RNA-binding protein that affects many cellular processes; homolog of mammalian Sm/Sm-like proteins)
     - CPLX0-1461 (HF-I, host factor for RNA phage Q β replication)

- EG10437 (hflX) (b4173)
   Products of gene:
     - EG10437-MONOMER (GTPase associated with the 50S subunit of the ribosome)
       Reactions:
        GTP + H2O  ->  GDP + phosphate + H+

- EG10387 (glnL) (b3869)
   Products of gene:
     - PROTEIN-NRIIP (NtrB-P)
     - PROTEIN-NRII (NtrB)
       Regulatees:
     - GLNL-CPLX (NtrB)

- EG10385 (glnG) (b3868)
   Products of gene:
     - PROTEIN-NRI (NtrC transcriptional dual regulator)
     - PROTEIN-NRIP (NtrC-Phosphorylated transcriptional dual regulator)
       Regulatees:
        TU0-1003 (astCADBE)
        TU00322 (potFGHI)
        TU0-3341 (ygjG)
        TU0-3623 (ddpXABCDF)
        TU0-3622 (yhdWXYZ)
        TU0-3621 (yeaGH)
        TU0-3581 (argT-hisJQMP)
        TU0-3645 (rutABCDEFG)
        TU0-1342 (cbl)
        TU0-5903 (glnA)
        TU00029 (glnALG)
        TU00172 (glnHPQ)
        TU65 (nac)
        TU587 (glnK-amtB)
        TU00028 (glnLG)
        TU0-5901 (glnA)
        TU00027 (glnALG)
     - GLNG-CPLX (NtrC transcriptional dual regulator)

- EG10317 (fis) (b3261)
   Products of gene:
     - PD00196 (Fis)
       Regulatees:
        TU0-6409 (gltX)
        TU0-13407 (yeaR-yoaG)
        TU0-14739 (ogt)
        TU00205 (guaBA)
        TU00176 (dps)
        TU0-14627 (trg)
        TU0-3341 (ygjG)
        TU0-6569 (ansB)
        TU543 (rnpB)
        TU00516 (glyU)
        TU0-2504 (topA)
        TU0-8001 (glnQ)
        TU0-3721 (acs-yjcHG)
        TU0-5903 (glnA)
        TU00029 (glnALG)
        TU0-14398 (crp)
        TU0-1963 (glcC)
        TU00501 (pheV)
        TU522 (mazEFG)
        TU523 (mazEFG)
        TU0-1187 (rrsG-gltW-rrlG-rrfG)
        TU0-1143 (yfiD)
        TU00495 (valUXY-lysV)
        TU00514 (alaWX)
        TU00500 (argW)
        TU00448 (nuoABCEFGHIJKLMN)
        TU00030 (glpABC)
        TU00216 (glpTQ)
        TU00047 (nrdAB)
        TU00140 (gyrA)
        TU00494 (proL)
        TU0-7901 (mglAC)
        TU00398 (osmE)
        TU0-6507 (katE)
        TU0-1501 (flxA)
        TU0-6981 (cspI)
        TU00190 (marRAB)
        TU369 (gadBC)
        TU0-3901 (sra)
        TU0-2501 (topA)
        TU00198 (adhE)
        TU00139 (hns)
        TU00511 (tyrTV-tpr)
        TU00510 (serX)
        TU00044 (narGHJI)
        TU581 (hlyE)
        TU00158 (ndh)
        TU0-1141 (ptsG)
        TU00288 (hyaABCDEF)
        TU00061 (pyrD)
        TU00380 (pflB)
        TU00019 (dmsABC)
        TU00491 (argU)
        TU488 (hupB)
        TU0-1189 (rrsH-ileV-alaV-rrlH-rrfH)
        TU343 (metY)
        TU0-6223 (metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp)
        TU00517 (metY-yhbC-nusA-infB)
        TU0-1601 (nanATEK-yhcH)
        TU00021 (dusB-fis)
        TU0-1191 (rrsD-ileU-alaU-rrlD-rrfD-thrV-rrfF)
        TU0-14396 (crp)
        TU00119 (crp)
        TU00046 (nirBDC-cysG)
        TU586 (gadAX)
        TU00519 (proK)
        TU00374 (xylFGHR)
        TU00138 (aldB)
        TU00193 (mtlADR)
        TU0-2603 (gyrB)
        TU0-4802 (bglGFB)
        TU0-1183 (rrsC-gltU-rrlC-rrfC)
        TU00503 (argX-hisR-leuT-proM)
        TU00215 (fadBA)
        TU0-1181 (rrsA-ileT-alaT-rrlA-rrfA)
        TU00430 (trmA)
        TU0-1182 (rrsB-gltT-rrlB-rrfB)
        TU00504 (thrU-tyrU-glyT-thrT-tufB)
        TU486 (hupA)
        TU0-1186 (rrsE-gltV-rrlE-rrfE)
        TU00038 (malEFG)
        TU0-3723 (acs-yjcHG)
        TU00199 (nrfABCDEFG)
        TU0-3882 (proP)
        TU00159 (fumB)
        TU00520 (pheU)
        TU241 (msrA)
        TU00506 (leuX)
        TU00521 (leuQPV)
        TU0-1981 (osmY)
        TU00490 (thrW)
        TU0-1142 (ptsG)
        TU00507 (metT-leuW-glnUW-metU-glnVX)
        TU489 (hupB)
        TU871 (queA)
        TU00489 (aspV)
        TU796 (acnB)
        TU00523 (lpdA)
        TU00110 (carAB)
        TU0-5221 (pdxA-rsmA)
        TU0-5201 (pdxA-rsmA-apaGH)
        TU00492 (lysT-valT-lysW)
        TU00509 (serT)
        TU00045 (narK)
        TU00018 (deoCABD)
     - CPLX0-7705 (Fis DNA binding transcriptional dual regulator)
       Regulatees:
        TU0-6409 (gltX)
        TU0-13407 (yeaR-yoaG)
        TU0-14739 (ogt)
        TU00205 (guaBA)
        TU00176 (dps)
        TU0-14627 (trg)
        TU0-3341 (ygjG)
        TU0-6569 (ansB)
        TU543 (rnpB)
        TU00516 (glyU)
        TU0-2504 (topA)
        TU0-8001 (glnQ)
        TU0-3721 (acs-yjcHG)
        TU0-5903 (glnA)
        TU00029 (glnALG)
        TU0-14398 (crp)
        TU0-1963 (glcC)
        TU00501 (pheV)
        TU522 (mazEFG)
        TU523 (mazEFG)
        TU0-1187 (rrsG-gltW-rrlG-rrfG)
        TU0-1143 (yfiD)
        TU00495 (valUXY-lysV)
        TU00514 (alaWX)
        TU00500 (argW)
        TU00448 (nuoABCEFGHIJKLMN)
        TU00030 (glpABC)
        TU00216 (glpTQ)
        TU00047 (nrdAB)
        TU00140 (gyrA)
        TU00494 (proL)
        TU0-7901 (mglAC)
        TU00398 (osmE)
        TU0-6507 (katE)
        TU0-1501 (flxA)
        TU0-6981 (cspI)
        TU00190 (marRAB)
        TU369 (gadBC)
        TU0-3901 (sra)
        TU0-2501 (topA)
        TU00198 (adhE)
        TU00139 (hns)
        TU00511 (tyrTV-tpr)
        TU00510 (serX)
        TU00044 (narGHJI)
        TU581 (hlyE)
        TU00158 (ndh)
        TU0-1141 (ptsG)
        TU00288 (hyaABCDEF)
        TU00061 (pyrD)
        TU00380 (pflB)
        TU00019 (dmsABC)
        TU00491 (argU)
        TU488 (hupB)
        TU0-1189 (rrsH-ileV-alaV-rrlH-rrfH)
        TU343 (metY)
        TU0-6223 (metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp)
        TU00517 (metY-yhbC-nusA-infB)
        TU0-1601 (nanATEK-yhcH)
        TU00021 (dusB-fis)
        TU0-1191 (rrsD-ileU-alaU-rrlD-rrfD-thrV-rrfF)
        TU0-14396 (crp)
        TU00119 (crp)
        TU00046 (nirBDC-cysG)
        TU586 (gadAX)
        TU00519 (proK)
        TU00374 (xylFGHR)
        TU00138 (aldB)
        TU00193 (mtlADR)
        TU0-2603 (gyrB)
        TU0-4802 (bglGFB)
        TU0-1183 (rrsC-gltU-rrlC-rrfC)
        TU00503 (argX-hisR-leuT-proM)
        TU00215 (fadBA)
        TU0-1181 (rrsA-ileT-alaT-rrlA-rrfA)
        TU00430 (trmA)
        TU0-1182 (rrsB-gltT-rrlB-rrfB)
        TU00504 (thrU-tyrU-glyT-thrT-tufB)
        TU486 (hupA)
        TU0-1186 (rrsE-gltV-rrlE-rrfE)
        TU00038 (malEFG)
        TU0-3723 (acs-yjcHG)
        TU00199 (nrfABCDEFG)
        TU0-3882 (proP)
        TU00159 (fumB)
        TU00520 (pheU)
        TU241 (msrA)
        TU00506 (leuX)
        TU00521 (leuQPV)
        TU0-1981 (osmY)
        TU00490 (thrW)
        TU0-1142 (ptsG)
        TU00507 (metT-leuW-glnUW-metU-glnVX)
        TU489 (hupB)
        TU871 (queA)
        TU00489 (aspV)
        TU796 (acnB)
        TU00523 (lpdA)
        TU00110 (carAB)
        TU0-5221 (pdxA-rsmA)
        TU0-5201 (pdxA-rsmA-apaGH)
        TU00492 (lysT-valT-lysW)
        TU00509 (serT)
        TU00045 (narK)
        TU00018 (deoCABD)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 206
Effective number of orgs (counting one per cluster within 468 clusters): 147

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola6
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A6
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110186
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103316
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae6
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-106
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80046
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339136
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3066
XAUT78245 ncbi Xanthobacter autotrophicus Py26
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1146
VEIS391735 ncbi Verminephrobacter eiseniae EF01-26
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TTUR377629 ncbi Teredinibacter turnerae T79016
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252596
TCRU317025 ncbi Thiomicrospira crunogena XCL-26
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
SSP94122 ncbi Shewanella sp. ANA-36
SSP644076 Silicibacter sp. TrichCH4B5
SSP292414 ncbi Ruegeria sp. TM10405
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB36
SPRO399741 ncbi Serratia proteamaculans 5686
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SONE211586 ncbi Shewanella oneidensis MR-16
SMEL266834 ncbi Sinorhizobium meliloti 10216
SMED366394 ncbi Sinorhizobium medicae WSM4196
SLOI323850 ncbi Shewanella loihica PV-46
SLAC55218 Ruegeria lacuscaerulensis5
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SGLO343509 ncbi Sodalis glossinidius morsitans5
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-406
SBOY300268 ncbi Shigella boydii Sb2276
SBAL402882 ncbi Shewanella baltica OS1856
SBAL399599 ncbi Shewanella baltica OS1956
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170255
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170295
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.15
RSOL267608 ncbi Ralstonia solanacearum GMI10006
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111706
RPOM246200 ncbi Ruegeria pomeroyi DSS-35
RPAL316058 ncbi Rhodopseudomonas palustris HaA26
RPAL316057 ncbi Rhodopseudomonas palustris BisB56
RPAL316056 ncbi Rhodopseudomonas palustris BisB186
RPAL316055 ncbi Rhodopseudomonas palustris BisA536
RPAL258594 ncbi Rhodopseudomonas palustris CGA0096
RMET266264 ncbi Ralstonia metallidurans CH346
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38416
RFER338969 ncbi Rhodoferax ferrireducens T1186
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1346
RETL347834 ncbi Rhizobium etli CFN 426
RDEN375451 ncbi Roseobacter denitrificans OCh 1145
PTHE370438 ncbi Pelotomaculum thermopropionicum SI6
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP56811 Psychrobacter sp.6
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-16
PSP296591 ncbi Polaromonas sp. JS6666
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PPRO298386 ncbi Photobacterium profundum SS96
PNAP365044 ncbi Polaromonas naphthalenivorans CJ26
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PING357804 ncbi Psychromonas ingrahamii 376
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PCRY335284 ncbi Psychrobacter cryohalolentis K56
PCAR338963 ncbi Pelobacter carbinolicus DSM 23806
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PARC259536 ncbi Psychrobacter arcticus 273-45
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
OCAR504832 ncbi Oligotropha carboxidovorans OM56
OANT439375 ncbi Ochrobactrum anthropi ATCC 491886
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2556
NHAM323097 ncbi Nitrobacter hamburgensis X146
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124446
MSP409 Methylobacterium sp.6
MSP400668 ncbi Marinomonas sp. MWYL16
MSP266779 ncbi Chelativorans sp. BNC16
MPET420662 ncbi Methylibium petroleiphilum PM15
MMAR394221 ncbi Maricaulis maris MCS105
MMAG342108 ncbi Magnetospirillum magneticum AMB-16
MLOT266835 ncbi Mesorhizobium loti MAFF3030996
MFLA265072 ncbi Methylobacillus flagellatus KT6
MEXT419610 ncbi Methylobacterium extorquens PA16
MCAP243233 ncbi Methylococcus capsulatus Bath6
MAQU351348 ncbi Marinobacter aquaeolei VT86
LCHO395495 ncbi Leptothrix cholodnii SP-66
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille6
JSP290400 ncbi Jannaschia sp. CCS15
ILOI283942 ncbi Idiomarina loihiensis L2TR6
HHAL349124 ncbi Halorhodospira halophila SL15
HCHE349521 ncbi Hahella chejuensis KCTC 23966
HARS204773 ncbi Herminiimonas arsenicoxydans6
GURA351605 ncbi Geobacter uraniireducens Rf46
GSUL243231 ncbi Geobacter sulfurreducens PCA6
GMET269799 ncbi Geobacter metallireducens GS-156
GBET391165 ncbi Granulibacter bethesdensis CGDNIH16
ESP42895 Enterobacter sp.6
ELIT314225 ncbi Erythrobacter litoralis HTCC25946
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DSHI398580 ncbi Dinoroseobacter shibae DFL 125
DRED349161 ncbi Desulfotomaculum reducens MI-15
DARO159087 ncbi Dechloromonas aromatica RCB6
CVIO243365 ncbi Chromobacterium violaceum ATCC 124726
CSP78 Caulobacter sp.6
CSP501479 Citreicella sp. SE455
CSAL290398 ncbi Chromohalobacter salexigens DSM 30436
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CJAP155077 Cellvibrio japonicus6
CAULO ncbi Caulobacter crescentus CB156
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTHA271848 ncbi Burkholderia thailandensis E2646
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13306
BSP376 Bradyrhizobium sp.6
BSP36773 Burkholderia sp.6
BPSE320373 ncbi Burkholderia pseudomallei 6686
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962436
BPET94624 Bordetella petrii6
BPER257313 ncbi Bordetella pertussis Tohama I6
BPAR257311 ncbi Bordetella parapertussis 128226
BOVI236 Brucella ovis6
BMEL359391 ncbi Brucella melitensis biovar Abortus 23086
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M6
BMAL320389 ncbi Burkholderia mallei NCTC 102476
BMAL320388 ncbi Burkholderia mallei SAVP16
BMAL243160 ncbi Burkholderia mallei ATCC 233446
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1106
BCEN331272 ncbi Burkholderia cenocepacia HI24246
BCAN483179 ncbi Brucella canis ATCC 233656
BBRO257310 ncbi Bordetella bronchiseptica RB506
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9416
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62977 ncbi Acinetobacter sp. ADP16
ASP62928 ncbi Azoarcus sp. BH726
ASP232721 ncbi Acidovorax sp. JS426
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
AHYD196024 Aeromonas hydrophila dhakensis6
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-16
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C5
ACRY349163 ncbi Acidiphilium cryptum JF-56
ACAU438753 ncbi Azorhizobium caulinodans ORS 5716
ABOR393595 ncbi Alcanivorax borkumensis SK26
ABAU360910 ncbi Bordetella avium 197N6
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455
AAVE397945 ncbi Acidovorax citrulli AAC00-16


Names of the homologs of the genes in the group in each of these orgs
  EG11311   EG10438   EG10437   EG10387   EG10385   EG10317   
YPSE349747 YPSIP31758_0386YPSIP31758_3653YPSIP31758_3652YPSIP31758_0026YPSIP31758_0025YPSIP31758_0385
YPSE273123 YPTB3576YPTB0425YPTB0426YPTB0023YPTB0022YPTB3577
YPES386656 YPDSF_0261YPDSF_3601YPDSF_3600YPDSF_3881YPDSF_3882YPDSF_0260
YPES377628 YPN_3517YPN_3298YPN_3297YPN_0250YPN_0249YPN_3518
YPES360102 YPA_3667YPA_3911YPA_3910YPA_3519YPA_3520YPA_3666
YPES349746 YPANGOLA_A1211YPANGOLA_A0699YPANGOLA_A0698YPANGOLA_A0028YPANGOLA_A0027YPANGOLA_A1212
YPES214092 YPO3655YPO0373YPO0374YPO0023YPO0022YPO3654
YPES187410 Y0213Y0630Y0632Y3805Y3806Y0214
YENT393305 YE3816YE0377YE0378YE0026YE0025YE3817
XORY360094 XOOORF_1119XOOORF_1721XOOORF_1722XOOORF_0296XOOORF_0297XOOORF_4798
XORY342109 XOO3567XOO2798XOO2797XOO4225XOO4224XOO0512
XORY291331 XOO3787XOO2946XOO2945XOO4484XOO4483XOO0548
XFAS405440 XFASM12_0070XFASM12_0069XFASM12_1118XFASM12_1119XFASM12_0976
XFAS183190 PD_0066PD_0065PD_1020PD_1021PD_0811
XFAS160492 XF0089XF0088XF1849XF1848XF1998
XCAM487884 XCC-B100_3590XCC-B100_2543XCC-B100_2542XCC-B100_0208XCC-B100_0209XCC-B100_0538
XCAM316273 XCAORF_0941XCAORF_1952XCAORF_1953XCAORF_4341XCAORF_4340XCAORF_3999
XCAM314565 XC_3469XC_2515XC_2514XC_0197XC_0198XC_0520
XCAM190485 XCC0763XCC1716XCC1717XCC0188XCC0189XCC0508
XAXO190486 XAC0816XAC1735XAC1736XAC0207XAC0208XAC0522
XAUT78245 XAUT_4401XAUT_4393XAUT_4392XAUT_4400XAUT_4399XAUT_4399
VVUL216895 VV1_1232VV1_1294VV1_1295VV1_0891VV1_0892VV1_1231
VVUL196600 VV3138VV3071VV3070VV0197VV0196VV3139
VPAR223926 VP2884VP2817VP2816VP0119VP0118VP2885
VFIS312309 VF2390VF2323VF2322VF0096VF0095VF2391
VEIS391735 VEIS_3027VEIS_0075VEIS_0074VEIS_3152VEIS_3151VEIS_3026
VCHO345073 VC0395_A2686VC0395_A2758VC0395_A2759VC0395_A2320VC0395_A2321VC0395_A2685
VCHO VC0291VC0347VC0348VC2748VC2749VC0290
TTUR377629 TERTU_3084TERTU_3558TERTU_3557TERTU_4423TERTU_4424TERTU_3085
TDEN292415 TBD_2456TBD_1533TBD_0602TBD_2501TBD_2500TBD_2457
TCRU317025 TCR_0441TCR_1086TCR_1087TCR_0905TCR_0906TCR_0440
STYP99287 STM3384STM4361STM4362STM4006STM4005STM3385
SSP94122 SHEWANA3_0399SHEWANA3_0597SHEWANA3_0598SHEWANA3_0259SHEWANA3_0258SHEWANA3_0398
SSP644076 SCH4B_2280SCH4B_2287SCH4B_2288SCH4B_2281SCH4B_2282
SSP292414 TM1040_1363TM1040_1356TM1040_1355TM1040_1362TM1040_1361
SSON300269 SSO_3401SSO_4357SSO_4358SSO_4041SSO_4040SSO_3402
SSED425104 SSED_4118SSED_0797SSED_0798SSED_0283SSED_0282SSED_4119
SPRO399741 SPRO_4423SPRO_0431SPRO_0432SPRO_4882SPRO_4883SPRO_4424
SPEA398579 SPEA_0390SPEA_3540SPEA_3539SPEA_3929SPEA_3930SPEA_0389
SONE211586 SO_0394SO_0603SO_0604SO_4471SO_4472SO_0393
SMEL266834 SMC01041SMC01048SMC01049SMC01042SMC01043SMC01043
SMED366394 SMED_1088SMED_1095SMED_1096SMED_1089SMED_1090SMED_1090
SLOI323850 SHEW_0330SHEW_0566SHEW_0567SHEW_3560SHEW_3561SHEW_0329
SLAC55218 SL1157_2682SL1157_2690SL1157_2691SL1157_2683SL1157_2684
SHIGELLA YHDGHFQHFLXGLNLGLNGFIS
SHAL458817 SHAL_3901SHAL_3634SHAL_3633SHAL_0342SHAL_0341SHAL_3902
SGLO343509 SG0337SG0338SG2231SG2232SG0150
SFLE373384 SFV_3285SFV_4330SFV_4331SFV_3632SFV_3633SFV_3286
SFLE198214 AAN44762.1AAN45744.1AAN45745.1AAN45374.1AAN45373.1AAN44763.1
SENT454169 SEHA_C3682SEHA_C4779SEHA_C4780SEHA_C4334SEHA_C4333SEHA_C3683
SENT321314 SCH_3322SCH_4237SCH_4238SCH_3898SCH_3897SCH_3323
SENT295319 SPA3251SPA4178SPA4179SPA3847SPA3846SPA3252
SENT220341 STY3564STY4718STY4719STY3875STY3876STY3565
SENT209261 T3299T4412T4413T3615T3616T3300
SDYS300267 SDY_3437SDY_4417SDY_4416SDY_3874SDY_3875SDY_3438
SDEN318161 SDEN_0445SDEN_3205SDEN_3204SDEN_3457SDEN_3458SDEN_0444
SDEG203122 SDE_0808SDE_2667SDE_2666SDE_0500SDE_0499SDE_0807
SBOY300268 SBO_3254SBO_4284SBO_4283SBO_3881SBO_3880SBO_3255
SBAL402882 SHEW185_3964SHEW185_3767SHEW185_3766SHEW185_0259SHEW185_0258SHEW185_3965
SBAL399599 SBAL195_4080SBAL195_3893SBAL195_3892SBAL195_0267SBAL195_0266SBAL195_4081
RSPH349102 RSPH17025_1486RSPH17025_1493RSPH17025_1494RSPH17025_1487RSPH17025_1488
RSPH349101 RSPH17029_1458RSPH17029_1451RSPH17029_1450RSPH17029_1457RSPH17029_1456
RSPH272943 RSP_2836RSP_2843RSP_2844RSP_2837RSP_2838
RSOL267608 RSC0506RSC1220RSC1221RSC1260RSC1261RSC0505
RRUB269796 RRU_A1676RRU_A1684RRU_A1685RRU_A1677RRU_A1678RRU_A1678
RPOM246200 SPO_2089SPO_2081SPO_2080SPO_2088SPO_2087
RPAL316058 RPB_2884RPB_2878RPB_2877RPB_2883RPB_2882RPB_2882
RPAL316057 RPD_2588RPD_2594RPD_2595RPD_2589RPD_2590RPD_2590
RPAL316056 RPC_2576RPC_2582RPC_2583RPC_2577RPC_2578RPC_2578
RPAL316055 RPE_2756RPE_2762RPE_2763RPE_2757RPE_2758RPE_2758
RPAL258594 RPA2591RPA2597RPA2598RPA2592RPA2593RPA2593
RMET266264 RMET_0429RMET_2101RMET_2100RMET_2060RMET_2059RMET_0428
RLEG216596 RL2255RL2284RL2285RL2256RL2257RL2257
RFER338969 RFER_1580RFER_2302RFER_2301RFER_2981RFER_2982RFER_1581
REUT381666 H16_A0503H16_A2359H16_A2358H16_A2333H16_A2332H16_A0502
REUT264198 REUT_A0489REUT_A2081REUT_A2080REUT_A2055REUT_A2054REUT_A0488
RETL347834 RHE_CH01946RHE_CH01954RHE_CH01955RHE_CH01947RHE_CH01948RHE_CH01948
RDEN375451 RD1_2765RD1_2755RD1_2754RD1_2764RD1_2763
PTHE370438 PTH_0259PTH_1345PTH_2120PTH_1422PTH_2258PTH_0508
PSYR223283 PSPTO_4864PSPTO_4942PSPTO_4941PSPTO_0353PSPTO_0352PSPTO_4865
PSYR205918 PSYR_4404PSYR_0572PSYR_0573PSYR_4821PSYR_4822PSYR_4405
PSTU379731 PST_3277PST_3668PST_3667PST_0350PST_0349PST_3278
PSP56811 PSYCPRWF_0953PSYCPRWF_0821PSYCPRWF_1868PSYCPRWF_1804PSYCPRWF_1805PSYCPRWF_1623
PSP312153 PNUC_1875PNUC_1286PNUC_1285PNUC_1254PNUC_1253PNUC_1876
PSP296591 BPRO_1130BPRO_2603BPRO_2602BPRO_1809BPRO_1810BPRO_1131
PPUT76869 PPUTGB1_4873PPUTGB1_4946PPUTGB1_4945PPUTGB1_5100PPUTGB1_5101PPUTGB1_4874
PPUT351746 PPUT_4695PPUT_4770PPUT_4769PPUT_4922PPUT_4923PPUT_4696
PPUT160488 PP_4820PP_4894PP_4893PP_5047PP_5048PP_4821
PPRO298386 PBPRA3410PBPRA3350PBPRA3349PBPRA3494PBPRA3495PBPRA3411
PNAP365044 PNAP_3360PNAP_1877PNAP_1878PNAP_2778PNAP_2777PNAP_3359
PMEN399739 PMEN_0710PMEN_0635PMEN_0636PMEN_4143PMEN_4144PMEN_0709
PLUM243265 PLU4088PLU4581PLU4580PLU0236PLU0235PLU4089
PING357804 PING_3215PING_3238PING_3237PING_3487PING_3488PING_3216
PHAL326442 PSHAA0347PSHAA0271PSHAA0272PSHAA0164PSHAA0163PSHAA0346
PFLU220664 PFL_0668PFL_0566PFL_0567PFL_0378PFL_0377PFL_0667
PFLU216595 PFLU0614PFLU0520PFLU0521PFLU0344PFLU0343PFLU0613
PFLU205922 PFL_0615PFL_0523PFL_0524PFL_0340PFL_0339PFL_0614
PENT384676 PSEEN4861PSEEN4943PSEEN4942PSEEN0387PSEEN0386PSEEN4862
PCRY335284 PCRYO_1078PCRYO_1493PCRYO_0396PCRYO_1716PCRYO_1717PCRYO_1650
PCAR338963 PCAR_1992PCAR_1306PCAR_2043PCAR_1993PCAR_1994PCAR_1994
PATL342610 PATL_0270PATL_3978PATL_3979PATL_1027PATL_1028PATL_0269
PARC259536 PSYC_1300PSYC_0921PSYC_0355PSYC_1538PSYC_1471
PAER208964 PA4852PA4944PA4943PA5124PA5125PA4853
PAER208963 PA14_64180PA14_65310PA14_65300PA14_67670PA14_67680PA14_64190
OCAR504832 OCAR_6094OCAR_6100OCAR_6101OCAR_6095OCAR_6096OCAR_6096
OANT439375 OANT_2070OANT_2208OANT_2207OANT_2071OANT_2072OANT_2072
NWIN323098 NWI_1443NWI_1449NWI_1450NWI_1444NWI_1445NWI_1445
NHAM323097 NHAM_1835NHAM_1841NHAM_1842NHAM_1836NHAM_1837NHAM_1837
NARO279238 SARO_1926SARO_1931SARO_1932SARO_1927SARO_1928SARO_1928
MSP409 M446_5928M446_5942M446_5943M446_5929M446_5930M446_5930
MSP400668 MMWYL1_2985MMWYL1_2632MMWYL1_2631MMWYL1_0735MMWYL1_0734MMWYL1_2986
MSP266779 MESO_1620MESO_1613MESO_1612MESO_1619MESO_1618MESO_1618
MPET420662 MPE_A0486MPE_A1991MPE_A1990MPE_A2074MPE_A2073
MMAR394221 MMAR10_1440MMAR10_1448MMAR10_1449MMAR10_1441MMAR10_2539
MMAG342108 AMB2365AMB2372AMB2373AMB2366AMB2367AMB2367
MLOT266835 MLR0396MLR0402MLR0403MLR0397MLR0398MLR0398
MFLA265072 MFLA_0351MFLA_1589MFLA_1588MFLA_2449MFLA_2450MFLA_0350
MEXT419610 MEXT_2818MEXT_2824MEXT_2825MEXT_2819MEXT_2820MEXT_2820
MCAP243233 MCA_1745MCA_1983MCA_1982MCA_2542MCA_2541MCA_1746
MAQU351348 MAQU_3448MAQU_2769MAQU_2768MAQU_0767MAQU_0766MAQU_3449
LCHO395495 LCHO_0534LCHO_2863LCHO_2862LCHO_3583LCHO_3584LCHO_0533
KPNE272620 GKPORF_B3008GKPORF_B3928GKPORF_B3929GKPORF_B3518GKPORF_B3517GKPORF_B3009
JSP375286 MMA_0306MMA_2122MMA_2121MMA_1080MMA_1081MMA_0307
JSP290400 JANN_2236JANN_2244JANN_2245JANN_2237JANN_2238
ILOI283942 IL2288IL0333IL0334IL2436IL2435IL2289
HHAL349124 HHAL_0666HHAL_0665HHAL_1216HHAL_1215HHAL_2001
HCHE349521 HCH_06009HCH_05383HCH_05382HCH_01034HCH_01033HCH_06010
HARS204773 HEAR0253HEAR1269HEAR1271HEAR0950HEAR0951HEAR0254
GURA351605 GURA_0914GURA_1772GURA_0905GURA_0915GURA_0916GURA_0916
GSUL243231 GSU_1005GSU_1999GSU_1009GSU_1004GSU_1003GSU_1003
GMET269799 GMET_2561GMET_2051GMET_2557GMET_2562GMET_2563GMET_2563
GBET391165 GBCGDNIH1_1228GBCGDNIH1_1123GBCGDNIH1_1124GBCGDNIH1_1227GBCGDNIH1_1226GBCGDNIH1_1226
ESP42895 ENT638_3699ENT638_0355ENT638_0356ENT638_4097ENT638_4098ENT638_3700
ELIT314225 ELI_06285ELI_06260ELI_06255ELI_06280ELI_06275ELI_06275
EFER585054 EFER_3239EFER_4225EFER_4226EFER_3904EFER_3905EFER_3240
ECOO157 YHDGHFQHFLXGLNLGLNGFIS
ECOL83334 ECS4132ECS5148ECS5149ECS4791ECS4790ECS4133
ECOL585397 ECED1_3919ECED1_4957ECED1_4958ECED1_4570ECED1_4569ECED1_3920
ECOL585057 ECIAI39_3760ECIAI39_4637ECIAI39_4638ECIAI39_3132ECIAI39_3133ECIAI39_3761
ECOL585056 ECUMN_3734ECUMN_4705ECUMN_4706ECUMN_4392ECUMN_4391ECUMN_3735
ECOL585055 EC55989_3674EC55989_4727EC55989_4728EC55989_4344EC55989_4343EC55989_3675
ECOL585035 ECS88_3645ECS88_4758ECS88_4759ECS88_4319ECS88_4318ECS88_3646
ECOL585034 ECIAI1_3403ECIAI1_4405ECIAI1_4406ECIAI1_4068ECIAI1_4067ECIAI1_3404
ECOL481805 ECOLC_0446ECOLC_3841ECOLC_3840ECOLC_4147ECOLC_4148ECOLC_0445
ECOL469008 ECBD_0485ECBD_3862ECBD_3861ECBD_4158ECBD_4159ECBD_0484
ECOL439855 ECSMS35_3555ECSMS35_4643ECSMS35_4644ECSMS35_4254ECSMS35_4253ECSMS35_3556
ECOL413997 ECB_03118ECB_04039ECB_04040ECB_03754ECB_03753ECB_03119
ECOL409438 ECSE_3541ECSE_4469ECSE_4470ECSE_4152ECSE_4151ECSE_3542
ECOL405955 APECO1_3178APECO1_2219APECO1_2218APECO1_2593APECO1_2594APECO1_3177
ECOL364106 UTI89_C3702UTI89_C4772UTI89_C4773UTI89_C4458UTI89_C4457UTI89_C3703
ECOL362663 ECP_3353ECP_4417ECP_4418ECP_4080ECP_4079ECP_3354
ECOL331111 ECE24377A_3745ECE24377A_4730ECE24377A_4731ECE24377A_4391ECE24377A_4390ECE24377A_3746
ECOL316407 ECK3247:JW3228:B3260ECK4168:JW4130:B4172ECK4169:JW4131:B4173ECK3862:JW3840:B3869ECK3861:JW3839:B3868ECK3248:JW3229:B3261
ECOL199310 C4026C5256C5257C4818C4817C4027
ECAR218491 ECA0256ECA3934ECA3933ECA0028ECA0027ECA0255
DSHI398580 DSHI_1576DSHI_1567DSHI_1566DSHI_1575DSHI_1574
DRED349161 DRED_0172DRED_1881DRED_1259DRED_2000DRED_2001
DARO159087 DARO_3665DARO_2980DARO_2979DARO_3759DARO_3758DARO_3666
CVIO243365 CV_0544CV_3533CV_3532CV_3591CV_3592CV_0545
CSP78 CAUL_2604CAUL_2610CAUL_2611CAUL_2605CAUL_0879CAUL_2606
CSP501479 CSE45_1379CSE45_1387CSE45_1388CSE45_1380CSE45_1381
CSAL290398 CSAL_2287CSAL_1277CSAL_1278CSAL_0245CSAL_0246CSAL_2288
CPSY167879 CPS_0550CPS_0325CPS_0326CPS_0398CPS_0397CPS_0551
CJAP155077 CJA_2745CJA_3079CJA_3078CJA_3536CJA_3537CJA_2746
CAULO CC1739CC1745CC1746CC1740CC3315CC1741
BVIE269482 BCEP1808_0658BCEP1808_1734BCEP1808_1733BCEP1808_2227BCEP1808_2226BCEP1808_0657
BTHA271848 BTH_I1252BTH_I2239BTH_I2240BTH_I1845BTH_I1846BTH_I1251
BSUI470137 BSUIS_A1168BSUIS_A1160BSUIS_A1159BSUIS_A1166BSUIS_A1166
BSUI204722 BR_1119BR_1111BR_1110BR_1118BR_1117BR_1117
BSP376 BRADO3868BRADO3855BRADO3854BRADO3867BRADO3866BRADO3866
BSP36773 BCEP18194_A3779BCEP18194_A5108BCEP18194_A5107BCEP18194_A5457BCEP18194_A5456BCEP18194_A3778
BPSE320373 BURPS668_3360BURPS668_2184BURPS668_2183BURPS668_2633BURPS668_2632BURPS668_3361
BPSE320372 BURPS1710B_A3677BURPS1710B_A2551BURPS1710B_A2550BURPS1710B_A3000BURPS1710B_A2999BURPS1710B_A3678
BPSE272560 BPSL2894BPSL1518BPSL1519BPSL2317BPSL2316BPSL2895
BPET94624 BPET0908BPET2025BPET2026BPET2275BPET2276BPET0907
BPER257313 BP3414BP2193BP2192BP1597BP1598BP3415
BPAR257311 BPP3564BPP2849BPP2848BPP2987BPP2986BPP3565
BOVI236 GBOORF1119GBOORF1112GBOORF1111GBOORF1118GBOORF1117GBOORF1117
BMEL359391 BAB1_1142BAB1_1134BAB1_1133BAB1_1141BAB1_1140BAB1_1140
BMEL224914 BMEI0864BMEI0872BMEI0873BMEI0865BMEI0866BMEI0866
BMAL320389 BMA10247_2538BMA10247_1101BMA10247_1100BMA10247_1523BMA10247_1522BMA10247_2537
BMAL320388 BMASAVP1_A0272BMASAVP1_A1829BMASAVP1_A1828BMASAVP1_A2251BMASAVP1_A2250BMASAVP1_A0271
BMAL243160 BMA_2358BMA_1340BMA_1339BMA_1741BMA_1740BMA_2357
BJAP224911 BLR4486BSR4491BLR4492BLR4487BLR4488BLR4488
BCEN331272 BCEN2424_0693BCEN2424_1807BCEN2424_1806BCEN2424_2148BCEN2424_2147BCEN2424_0692
BCAN483179 BCAN_A1138BCAN_A1130BCAN_A1129BCAN_A1137BCAN_A1136BCAN_A1136
BBRO257310 BB3999BB3170BB3169BB2953BB2952BB4000
BAMB398577 BAMMC406_0612BAMMC406_1718BAMMC406_1717BAMMC406_2058BAMMC406_2057BAMMC406_0611
BAMB339670 BAMB_0586BAMB_1745BAMB_1744BAMB_2185BAMB_2184BAMB_0585
BABO262698 BRUAB1_1125BRUAB1_1117BRUAB1_1116BRUAB1_1124BRUAB1_1123BRUAB1_1123
ASP76114 EBA1152EBA1255EBA1254EBA4117EBA4116
ASP62977 ACIAD2557ACIAD2373ACIAD3005ACIAD1369ACIAD1368ACIAD2446
ASP62928 AZO2892AZO0932AZO0933AZO0736AZO0735AZO2893
ASP232721 AJS_3586AJS_1175AJS_1176AJS_1191AJS_1192AJS_3585
ASAL382245 ASA_0808ASA_3369ASA_3368ASA_4122ASA_4123ASA_0807
AORE350688 CLOS_0447CLOS_1551CLOS_1786CLOS_1078CLOS_1079
AHYD196024 AHA_3510AHA_0924AHA_0925AHA_0275AHA_0274AHA_3511
AFER243159 AFE_1202AFE_1201AFE_0207AFE_0208AFE_2834
AEHR187272 MLG_1399MLG_0573MLG_0574MLG_0015MLG_0016MLG_0610
ADEH290397 ADEH_3790ADEH_0203ADEH_1907ADEH_0922ADEH_3791
ACRY349163 ACRY_2032ACRY_1762ACRY_1761ACRY_2033ACRY_2034ACRY_2034
ACAU438753 AZC_3088AZC_3080AZC_3079AZC_3087AZC_3086AZC_3086
ABOR393595 ABO_2013ABO_2203ABO_2202ABO_2260ABO_2259ABO_2014
ABAU360910 BAV2774BAV2338BAV2337BAV1930BAV1929BAV2775
ABAC204669 ACID345_0030ACID345_4341ACID345_4340ACID345_0750ACID345_1734
AAVE397945 AAVE_0894AAVE_1429AAVE_1430AAVE_1444AAVE_1445AAVE_0895


Organism features enriched in list (features available for 191 out of the 206 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00007051592
Disease:Brucellosis 0.003642355
Disease:Bubonic_plague 0.001172166
Disease:Dysentery 0.001172166
Disease:Gastroenteritis 0.00110661013
Endospores:No 7.034e-1135211
Endospores:Yes 5.837e-6453
GC_Content_Range4:0-40 3.110e-433213
GC_Content_Range4:40-60 1.223e-7102224
GC_Content_Range4:60-100 1.288e-1486145
GC_Content_Range7:30-40 2.723e-303166
GC_Content_Range7:50-60 2.671e-1165107
GC_Content_Range7:60-70 3.950e-1785134
Genome_Size_Range5:2-4 2.069e-738197
Genome_Size_Range5:4-6 5.009e-34125184
Genome_Size_Range5:6-10 0.00005362847
Genome_Size_Range9:2-3 6.253e-1013120
Genome_Size_Range9:4-5 5.972e-146496
Genome_Size_Range9:5-6 1.698e-146188
Genome_Size_Range9:6-8 2.823e-62638
Gram_Stain:Gram_Neg 6.971e-36175333
Gram_Stain:Gram_Pos 5.949e-282150
Habitat:Host-associated 0.001178352206
Habitat:Multiple 0.000072478178
Habitat:Specialized 0.0014680853
Motility:No 1.482e-1414151
Motility:Yes 3.663e-16133267
Optimal_temp.:25-30 2.874e-71719
Optimal_temp.:37 0.004210224106
Oxygen_Req:Anaerobic 9.899e-118102
Oxygen_Req:Facultative 2.911e-793201
Pathogenic_in:Plant 0.00114661115
Shape:Coccus 5.207e-9682
Shape:Rod 4.921e-22165347
Shape:Sphere 0.0044453119
Shape:Spiral 0.0029799434
Temp._range:Mesophilic 0.0020280167473
Temp._range:Psychrophilic 0.000736689
Temp._range:Thermophilic 0.0000922235



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 227
Effective number of orgs (counting one per cluster within 468 clusters): 185

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WSUC273121 ncbi Wolinella succinogenes DSM 17400
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TTHE300852 ncbi Thermus thermophilus HB80
TTHE262724 ncbi Thermus thermophilus HB270
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TFUS269800 ncbi Thermobifida fusca YX1
TELO197221 ncbi Thermosynechococcus elongatus BP-11
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STRO369723 ncbi Salinispora tropica CNB-4401
STOK273063 ncbi Sulfolobus tokodaii 70
SSP84588 ncbi Synechococcus sp. WH 81020
SSP64471 ncbi Synechococcus sp. CC93111
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSP1131 Synechococcus sp. CC96050
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SPNE170187 ncbi Streptococcus pneumoniae G541
SMAR399550 ncbi Staphylothermus marinus F10
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington1
RSP101510 ncbi Rhodococcus jostii RHA11
RRIC452659 ncbi Rickettsia rickettsii Iowa1
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
RMAS416276 ncbi Rickettsia massiliae MTU50
RFEL315456 ncbi Rickettsia felis URRWXCal21
RCON272944 ncbi Rickettsia conorii Malish 71
RCAN293613 ncbi Rickettsia canadensis McKiel1
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RBEL336407 ncbi Rickettsia bellii RML369-C1
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PMOB403833 ncbi Petrotoga mobilis SJ951
PMAR93060 ncbi Prochlorococcus marinus MIT 92150
PMAR74547 ncbi Prochlorococcus marinus MIT 93130
PMAR74546 ncbi Prochlorococcus marinus MIT 93120
PMAR59920 ncbi Prochlorococcus marinus NATL2A0
PMAR167555 ncbi Prochlorococcus marinus NATL1A0
PMAR167546 ncbi Prochlorococcus marinus MIT 93010
PMAR167542 ncbi Prochlorococcus marinus MIT 95150
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR167539 ncbi Prochlorococcus marinus marinus CCMP13750
PMAR146891 ncbi Prochlorococcus marinus AS96010
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong1
NSP387092 ncbi Nitratiruptor sp. SB155-21
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra1
MTUB336982 ncbi Mycobacterium tuberculosis F111
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MTBRV ncbi Mycobacterium tuberculosis H37Rv1
MTBCDC ncbi Mycobacterium tuberculosis CDC15511
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSP189918 ncbi Mycobacterium sp. KMS1
MSP164757 ncbi Mycobacterium sp. JLS1
MSP164756 ncbi Mycobacterium sp. MCS1
MSME246196 ncbi Mycobacterium smegmatis MC2 1551
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go11
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN1
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L11
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P21
MBOV233413 ncbi Mycobacterium bovis AF2122/971
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8431
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A1
MABS561007 ncbi Mycobacterium abscessus ATCC 199771
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82930
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
LACI272621 ncbi Lactobacillus acidophilus NCFM1
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HHEP235279 ncbi Helicobacter hepaticus ATCC 514490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
FSUC59374 ncbi Fibrobacter succinogenes succinogenes S850
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI31
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255860
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
FMAG334413 ncbi Finegoldia magna ATCC 293280
FALN326424 ncbi Frankia alni ACN14a1
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
EFAE226185 ncbi Enterococcus faecalis V5831
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake1
DSP216389 ncbi Dehalococcoides sp. BAV11
DRAD243230 ncbi Deinococcus radiodurans R10
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA0
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ407148 ncbi Campylobacter jejuni jejuni 811161
CJEJ360109 ncbi Campylobacter jejuni doylei 269.971
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1761
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CHOM360107 ncbi Campylobacter hominis ATCC BAA-3810
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCAV227941 ncbi Chlamydophila caviae GPIC1
CBLO203907 ncbi Candidatus Blochmannia floridanus1
CABO218497 ncbi Chlamydophila abortus S26/30
BXEN266265 ncbi Burkholderia xenovorans LB4000
BTUR314724 ncbi Borrelia turicatae 91E1350
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54821
BSP107806 ncbi Buchnera aphidicola APS (Acyrthosiphon pisum)1
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH1
BGAR290434 ncbi Borrelia garinii PBi1
BFRA272559 ncbi Bacteroides fragilis NCTC 93431
BBUR224326 ncbi Borrelia burgdorferi B311
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)1
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
AMAR234826 ncbi Anaplasma marginale St. Maries1
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ABUT367737 ncbi Arcobacter butzleri RM40180


Names of the homologs of the genes in the group in each of these orgs
  EG11311   EG10438   EG10437   EG10387   EG10385   EG10317   
WSUC273121
WPIP955 WD_0025
WPIP80849 WB_0699
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TTHE300852
TTHE262724
TPEN368408
TPAL243276 TP_0519
TLET416591 TLET_0782
TKOD69014
TFUS269800 TFU_0820
TELO197221 TLL0991
TDEN326298 TMDEN_1169
TDEN243275 TDE_1969
TACI273075
STRO369723 STROP_1449
STOK273063
SSP84588
SSP64471 GSYN0623
SSP387093 SUN_1320
SSP1131
SSOL273057
SSAP342451 SSP1456
SPNE170187 SPN04034
SMAR399550
SHAE279808 SH1605
SEPI176280 SE_0982
SEPI176279 SERP0871
SAUR93062 SACOL1324
SAUR93061 SAOUHSC_01281
SAUR426430 NWMN_1212
SAUR418127 SAHV_1294
SAUR367830 SAUSA300_1196
SAUR359787 SAURJH1_1389
SAUR359786 SAURJH9_1363
SAUR282459 SAS1237
SAUR282458 SAR1279
SAUR273036 SAB1165
SAUR196620 MW1187
SAUR158879 SA1145
SAUR158878 SAV1305
SACI330779
RXYL266117
RTYP257363 RT0010
RSP101510 RHA1_RO06778
RRIC452659 RRIOWA_0019
RRIC392021 A1G_00080
RPRO272947 RP011
RMAS416276
RFEL315456 RF_0012
RCON272944 RC0011
RCAN293613 A1E_00045
RBEL391896 A1I_01285
RBEL336407 RBE_1199
RAKA293614 A1C_00320
PTOR263820
PRUM264731
PPEN278197 PEPE_1543
PMOB403833 PMOB_1381
PMAR93060
PMAR74547
PMAR74546
PMAR59920
PMAR167555
PMAR167546
PMAR167542
PMAR167540 PMM1009
PMAR167539
PMAR146891
PISL384616
PINT246198 PIN_A0422
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PACN267747 PPA1021
PABY272844
OTSU357244 OTBS_1639
NSP387092 NIS_1194
NSEN222891 NSE_0373
NPHA348780
MVAN350058 MVAN_2436
MTUB419947 MRA_2752
MTUB336982 TBFG_12738
MTHE349307
MTHE187420
MTBRV RV2725C
MTBCDC MT2797
MSYN262723
MSTA339860
MSP189918 MKMS_2210
MSP164757 MJLS_2151
MSP164756 MMCS_2164
MSME246196 MSMEG_2736
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632 MSC_0068
MMOB267748
MMAZ192952 MM1343
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631 ML0997
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311 MFL029
MCAP340047 MCAP_0837
MBUR259564 MBUR_2154
MBOV410289 BCG_2738C
MBOV233413 MB2744C
MBAR269797 MBAR_A1003
MAVI243243 MAV_3618
MART243272
MAER449447 MAE_24990
MAEO419665
MACE188937 MA0035
MABS561007 MAB_3042C
LSAK314315 LSA1595
LREU557436 LREU_0270
LPLA220668 LP_0549
LMES203120
LLAC272623 L19272
LLAC272622 LACR_2221
LJOH257314 LJ_0286
LHEL405566 LHV_0298
LGAS324831 LGAS_0279
LDEL390333 LDB0372
LDEL321956 LBUL_0327
LCAS321967 LSEI_2533
LBRE387344 LVIS_0525
LBOR355277 LBJ_1702
LBOR355276 LBL_1921
LBIF456481 LEPBI_I0479
LBIF355278 LBF_0461
LACI272621 LBA0280
KRAD266940 KRAD_1503
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPYL357544
HPY
HMUK485914
HMAR272569
HHEP235279
HBUT415426
HACI382638
FSUC59374
FSP1855 FRANEAN1_1231
FSP106370 FRANCCI3_3511
FNUC190304
FNOD381764 FNOD_0121
FMAG334413
FALN326424 FRAAL5704
ERUM302409 ERGA_CDS_03360
ERUM254945 ERWE_CDS_03400
EFAE226185 EF_0267
ECHA205920 ECH_0758
ECAN269484 ECAJ_0316
DSP216389 DEHABAV1_0667
DRAD243230
DGEO319795
CVES412965
CTRA471473 CTLON_0631
CTRA471472 CTL0634
CSUL444179
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CPEL335992
CMUR243161 TC_0658
CMET456442
CMAQ397948
CKOR374847
CJEJ407148 C8J_0116
CJEJ360109 JJD26997_0136
CJEJ354242 CJJ81176_0158
CJEJ195099 CJE_0118
CJEJ192222 CJ0123C
CHOM360107
CFET360106
CFEL264202
CCUR360105
CCON360104
CCAV227941 CCA_00265
CBLO203907 BFL080
CABO218497
BXEN266265
BTUR314724
BTHE226186 BT_3073
BSP107806 BU400
BLON206672
BHER314723 BH0763
BGAR290434 BG0786
BFRA272559 BF4353
BBUR224326 BB_0763
BAPH372461 BCC_252
BAPH198804 BUSG387
BAFZ390236 BAPKO_0810
AYEL322098
AURANTIMONAS
APHA212042 APH_0575
APER272557
AMAR234826 AM492
ALAI441768 ACL_1378
AFUL224325
ACEL351607 ACEL_1482
ABUT367737


Organism features enriched in list (features available for 216 out of the 227 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00069172192
Arrangment:Clusters 3.097e-81717
Arrangment:Pairs 0.006219131112
Disease:Pharyngitis 0.000326888
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00001531111
Disease:bronchitis_and_pneumonitis 0.000326888
Endospores:No 1.168e-11116211
Endospores:Yes 3.623e-8353
GC_Content_Range4:0-40 2.179e-13120213
GC_Content_Range4:40-60 0.000034561224
GC_Content_Range4:60-100 0.000028534145
GC_Content_Range7:0-30 5.177e-63247
GC_Content_Range7:30-40 3.082e-788166
GC_Content_Range7:50-60 9.827e-817107
GC_Content_Range7:60-70 0.000019130134
Genome_Size_Range5:0-2 1.275e-29116155
Genome_Size_Range5:4-6 6.066e-2219184
Genome_Size_Range5:6-10 0.0003689747
Genome_Size_Range9:0-1 4.013e-112627
Genome_Size_Range9:1-2 2.906e-1890128
Genome_Size_Range9:2-3 0.002604457120
Genome_Size_Range9:3-4 0.00121081777
Genome_Size_Range9:4-5 1.797e-101096
Genome_Size_Range9:5-6 9.808e-10988
Genome_Size_Range9:6-8 0.0006059538
Gram_Stain:Gram_Neg 1.738e-1185333
Habitat:Host-associated 3.705e-7104206
Habitat:Multiple 5.631e-1034178
Habitat:Specialized 0.00117753053
Habitat:Terrestrial 0.0004156331
Motility:No 0.000169774151
Motility:Yes 2.393e-1063267
Optimal_temp.:30-37 0.00005451518
Oxygen_Req:Anaerobic 0.003870149102
Oxygen_Req:Facultative 0.000016452201
Oxygen_Req:Microaerophilic 0.00708351218
Shape:Coccus 0.00342324182
Shape:Irregular_coccus 0.00001411517
Shape:Rod 5.501e-2175347
Shape:Sphere 0.00002301619
Shape:Spiral 2.216e-72734
Temp._range:Hyperthermophilic 0.00004201823
Temp._range:Mesophilic 0.0014054162473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951690.7691
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491410.7337
GLYCOCAT-PWY (glycogen degradation I)2461820.7026
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251730.7004
TYRFUMCAT-PWY (tyrosine degradation I)1841540.6967
PWY-5918 (heme biosynthesis I)2721910.6952
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001970.6678
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861910.6603
PWY-4041 (γ-glutamyl cycle)2791870.6501
PWY-5148 (acyl-CoA hydrolysis)2271640.6306
PWY-1269 (CMP-KDO biosynthesis I)3251990.6252
PWY-5028 (histidine degradation II)1301160.6131
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392000.6022
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911840.6003
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961850.5953
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181550.5932
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482010.5904
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831390.5880
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351140.5744
P344-PWY (acrylonitrile degradation)2101490.5743
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001830.5722
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))1381150.5700
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901790.5685
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911390.5612
AST-PWY (arginine degradation II (AST pathway))1201040.5565
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561220.5546
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761310.5517
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551630.5460
PWY-5913 (TCA cycle variation IV)3011790.5426
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291880.5414
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491600.5410
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491600.5410
REDCITCYC (TCA cycle variation II)1741280.5359
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982050.5214
GALACTCAT-PWY (D-galactonate degradation)104910.5180
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3651950.5147
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96860.5127
PWY-46 (putrescine biosynthesis III)1381070.5042
GALACTARDEG-PWY (D-galactarate degradation I)1511130.5022
GLUCONSUPER-PWY (D-gluconate degradation)2291460.4973
PWY-5340 (sulfate activation for sulfonation)3851970.4894
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911290.4872
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111740.4856
GLUCARDEG-PWY (D-glucarate degradation I)1521110.4825
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891660.4819
VALDEG-PWY (valine degradation I)2901660.4796
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112910.4795
GLYOXYLATE-BYPASS (glyoxylate cycle)1691180.4767
4AMINOBUTMETAB-PWY (superpathway of 4-aminobutyrate degradation)2121360.4746
PWY-2361 (3-oxoadipate degradation)82740.4732
DAPLYSINESYN-PWY (lysine biosynthesis I)3421820.4725
PWY-6087 (4-chlorocatechol degradation)2231400.4716
PWY-561 (superpathway of glyoxylate cycle)1621140.4701
PWY-6268 (adenosylcobalamin salvage from cobalamin)3171730.4653
GALACTITOLCAT-PWY (galactitol degradation)73680.4653
PWY-5386 (methylglyoxal degradation I)3051690.4651
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222030.4632
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3741890.4551
PWY0-981 (taurine degradation IV)106850.4536
PWY-5084 (2-ketoglutarate dehydrogenase complex)3261740.4523
P601-PWY (D-camphor degradation)95790.4516
GLUCARGALACTSUPER-PWY (superpathway of D-glucarate and D-galactarate degradation)135990.4502
PWY0-862 (cis-dodecenoyl biosynthesis)3431790.4498
PWY-6193 (3-chlorocatechol degradation II (ortho))1941250.4484
PWY-3162 (tryptophan degradation V (side chain pathway))94780.4472
PWY0-1353 (succinate to cytochrome bd oxidase electron transfer)1781180.4467
LIPASYN-PWY (phospholipases)2121320.4458
PWY-5964 (molybdopterin guanine dinucleotide biosynthesis)2901610.4454
PWY-5669 (phosphatidylethanolamine biosynthesis I)4161990.4451
PWY1-3 (polyhydroxybutyrate biosynthesis)115880.4395
PWY-5025 (IAA biosynthesis IV)92760.4383
P184-PWY (protocatechuate degradation I (meta-cleavage pathway))94770.4377
GLYSYN-THR-PWY (glycine biosynthesis IV)2151320.4371
PWY-5188 (tetrapyrrole biosynthesis I)4392030.4326
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81690.4283
PWY0-1313 (acetate conversion to acetyl-CoA)3851880.4262
PWY0-1337 (oleate β-oxidation)1991240.4259
PWY-5938 ((R)-acetoin biosynthesis I)3761850.4232
ARGSYNBSUB-PWY (arginine biosynthesis II (acetyl cycle))3831870.4232
P381-PWY (adenosylcobalamin biosynthesis II (late cobalt incorporation))3711830.4194
PWY0-501 (lipoate biosynthesis and incorporation I)3851870.4192
PWY-4302 (aerobic respiration -- electron donor III)2141290.4184
PWY-5507 (adenosylcobalamin biosynthesis I (early cobalt insertion))2991600.4175
ACETATEUTIL-PWY (superpathway of acetate utilization and formation)2371370.4121
GLUT-REDOX-PWY (glutathione redox reactions II)2461400.4094
PWY-4221 (pantothenate and coenzymeA biosynthesis II)112830.4084
PWY-5194 (siroheme biosynthesis)3121630.4083
PWY-81 (toluene degradation to benzoyl-CoA (anaerobic))67590.4058
PWY-6389 ((S)-acetoin biosynthesis)3681800.4047
PWY-3941 (β-alanine biosynthesis II)117850.4046
PWY-1781 (β-alanine degradation II)49480.4030
METSYN-PWY (homoserine and methionine biosynthesis)3971880.4026



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10438   EG10437   EG10387   EG10385   EG10317   
EG113110.9986420.9985910.9993220.9989230.999933
EG104380.9999610.9991220.9987120.998967
EG104370.9991240.998780.998955
EG103870.9999270.999371
EG103850.999108
EG10317



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PAIRWISE BLAST SCORES:

  EG11311   EG10438   EG10437   EG10387   EG10385   EG10317   
EG113110.0f0-----
EG10438-0.0f0----
EG10437--0.0f0---
EG10387---0.0f0--
EG10385----0.0f0-
EG10317-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10437 EG10438 (centered at EG10437)
EG10317 EG11311 (centered at EG10317)
EG10385 EG10387 (centered at EG10387)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11311   EG10438   EG10437   EG10387   EG10385   EG10317   
414/623332/623394/623251/623223/623235/623
AAEO224324:0:Tyes-0--705-
AAUR290340:2:Tyes0-111---
AAVE397945:0:Tyes05285295435441
ABAC204669:0:Tyes0434843477271714-
ABAU360910:0:Tyes85141741610852
ABOR393595:0:Tyes01921912492481
ACAU438753:0:Tyes910877
ACEL351607:0:Tyes--0---
ACRY349163:8:Tyes27810279280280
ADEH290397:0:Tyes3623-017217233624
AEHR187272:0:Tyes137455355401590
AFER243159:0:Tyes-977976012588
AHYD196024:0:Tyes3148635636103149
ALAI441768:0:Tyes0-----
AMAR234826:0:Tyes0-----
AMAR329726:9:Tyes0-2047---
AMET293826:0:Tyes19950-707706-
ANAE240017:0:Tyes135-0---
AORE350688:0:Tyes011011334628629-
APHA212042:0:Tyes0-----
APLE416269:0:Tyes018111812--1
APLE434271:0:Tno018341835--1
ASAL382245:5:Tyes124542453319031910
ASP1667:3:Tyes0-133---
ASP232721:2:Tyes23270121222326
ASP62928:0:Tyes2198200201102199
ASP62977:0:Tyes1098927150110994
ASP76114:2:Tyes0686717511750-
AVAR240292:3:Tyes0-1198705--
BABO262698:1:Tno810766
BAFZ390236:2:Fyes----0-
BAMB339670:3:Tno111861185163916380
BAMB398577:3:Tno111181117146614650
BAMY326423:0:Tyes01619-1236--
BANT260799:0:Tno035321679---
BANT261594:2:Tno034411607---
BANT568206:2:Tyes063826012946--
BANT592021:2:Tno036491692---
BAPH198804:0:Tyes-----0
BAPH372461:0:Tyes-----0
BBAC264462:0:Tyes--1649277731370
BBAC360095:0:Tyes-01---
BBRO257310:0:Tyes1063219218101064
BBUR224326:21:Fno----0-
BCAN483179:1:Tno910877
BCEN331271:0:Tno-355-01-
BCEN331271:2:Tno0-----
BCEN331272:3:Tyes111131112145414530
BCER226900:1:Tyes0355835541356--
BCER288681:0:Tno0345534491339--
BCER315749:1:Tyes0218221762107--
BCER405917:1:Tyes0346134551433--
BCER572264:1:Tno0355835521291--
BCIC186490:0:Tyes-10---
BCLA66692:0:Tyes02120----
BFRA272559:1:Tyes0-----
BFRA295405:0:Tno3036--0--
BGAR290434:2:Fyes----0-
BHAL272558:0:Tyes02342-1779--
BHEN283166:0:Tyes-01---
BHER314723:0:Fyes----0-
BJAP224911:0:Fyes056122
BLIC279010:0:Tyes0181118381372--
BMAL243160:1:Tno91210359358911
BMAL320388:1:Tno115281527193719360
BMAL320389:1:Tyes1405104124111404
BMEL224914:1:Tno089122
BMEL359391:1:Tno810766
BOVI236:1:Tyes710655
BPAR257311:0:Tno68210126125683
BPER257313:0:Tyes1641520519011642
BPET94624:0:Tyes111231124137313740
BPSE272560:1:Tyes1380017937921381
BPSE320372:1:Tno1022103603591023
BPSE320373:1:Tno1122104294281123
BPUM315750:0:Tyes0159616051262--
BQUI283165:0:Tyes-01---
BSP107806:2:Tyes-----0
BSP36773:2:Tyes113501349171217110
BSP376:0:Tyes1410131212
BSUB:0:Tyes0178417931384--
BSUI204722:1:Tyes910877
BSUI470137:1:Tno710-66
BTHA271848:1:Tno19649655795800
BTHE226186:0:Tyes0-----
BTHU281309:1:Tno0334933441245--
BTHU412694:1:Tno0315731511235--
BTRI382640:1:Tyes-10---
BVIE269482:7:Tyes110691068156015590
BWEI315730:4:Tyes034153409---
CACE272562:1:Tyes13800457---
CAULO:0:Tyes067115992
CBEI290402:0:Tyes0242740463643--
CBLO203907:0:Tyes--0---
CBLO291272:0:Tno-01---
CBOT36826:1:Tno17230----
CBOT441770:0:Tyes17860----
CBOT441771:0:Tno16520----
CBOT441772:1:Tno18280----
CBOT498213:1:Tno181801371---
CBOT508765:1:Tyes01583778---
CBOT515621:2:Tyes17940----
CBOT536232:0:Tno19580----
CBUR227377:1:Tyes--630--0
CBUR360115:1:Tno--468--0
CBUR434922:2:Tno--0--669
CCAV227941:1:Tyes--0---
CCHL340177:0:Tyes0-941---
CDES477974:0:Tyes0413944524--
CDIF272563:1:Tyes281512160---
CDIP257309:0:Tyes471-0---
CEFF196164:0:Fyes648-0---
CGLU196627:0:Tyes646-0---
CHUT269798:0:Tyes0-3425---
CHYD246194:0:Tyes9410-616450-
CJAP155077:0:Tyes03293287857861
CJEI306537:0:Tyes0-771---
CJEJ192222:0:Tyes0-----
CJEJ195099:0:Tno0-----
CJEJ354242:2:Tyes0-----
CJEJ360109:0:Tyes0-----
CJEJ407148:0:Tno0-----
CKLU431943:1:Tyes01380----
CMIC31964:2:Tyes336-0---
CMIC443906:2:Tyes0-447---
CMUR243161:1:Tyes--0---
CNOV386415:0:Tyes01047----
CPER195102:1:Tyes13730807---
CPER195103:0:Tno13490833---
CPER289380:3:Tyes12310740---
CPHY357809:0:Tyes0-109---
CPRO264201:0:Fyes--40810-
CPSY167879:0:Tyes217016564218
CRUT413404:0:Tyes--0--706
CSAL290398:0:Tyes209210561057012093
CSP501479:8:Fyes0891-2
CSP78:2:Tyes173317391740173401735
CTEP194439:0:Tyes539-0---
CTET212717:0:Tyes0-1853---
CTRA471472:0:Tyes--0---
CTRA471473:0:Tno--0---
CVIO243365:0:Tyes030713070313331341
DARO159087:0:Tyes68810784783689
DDES207559:0:Tyes--26803546-
DETH243164:0:Tyes--5950--
DHAF138119:0:Tyes01403-424743-
DNOD246195:0:Tyes0171172---
DOLE96561:0:Tyes2473--01-
DPSY177439:2:Tyes--261325860-
DRED349161:0:Tyes01727110518421843-
DSHI398580:5:Tyes10109-8
DSP216389:0:Tyes--0---
DSP255470:0:Tno--0793--
DVUL882:1:Tyes--161610-
ECAN269484:0:Tyes0-----
ECAR218491:0:Tyes2423958395710241
ECHA205920:0:Tyes0-----
ECOL199310:0:Tno0121212137817801
ECOL316407:0:Tno09089091471481
ECOL331111:6:Tno09419426226211
ECOL362663:0:Tno0104810497187171
ECOL364106:1:Tno0105410557437421
ECOL405955:2:Tyes09919926056041
ECOL409438:6:Tyes09679686336321
ECOL413997:0:Tno09469476496481
ECOL439855:4:Tno0103810396686671
ECOL469008:0:Tno133623361367036710
ECOL481805:0:Tno134023401371737180
ECOL585034:0:Tno09589596406391
ECOL585035:0:Tno0105610576476461
ECOL585055:0:Tno0102210236576561
ECOL585056:2:Tno09609616526511
ECOL585057:0:Tno6311503150401632
ECOL585397:0:Tno0100810096356341
ECOL83334:0:Tno0105810596866851
ECOLI:0:Tno09309316206191
ECOO157:0:Tno0102110226956941
EFAE226185:3:Tyes0-----
EFER585054:1:Tyes09499506386391
ELIT314225:0:Tyes610544
ERUM254945:0:Tyes0-----
ERUM302409:0:Tno0-----
ESP42895:1:Tyes337401378137823375
FALN326424:0:Tyes--0---
FJOH376686:0:Tyes0-100---
FNOD381764:0:Tyes-0----
FPHI484022:1:Tyes35801---
FRANT:0:Tno0100101---
FSP106370:0:Tyes--0---
FSP1855:0:Tyes--0---
FTUL351581:0:Tno6601---
FTUL393011:0:Tno5801---
FTUL393115:0:Tyes0100101---
FTUL401614:0:Tyes06362---
FTUL418136:0:Tno06261---
FTUL458234:0:Tno5601---
GBET391165:0:Tyes10501104103103
GFOR411154:0:Tyes209-0---
GKAU235909:1:Tyes013041315935--
GMET269799:1:Tyes5020498503504504
GOXY290633:5:Tyes40---3
GSUL243231:0:Tyes29906100
GTHE420246:1:Tyes010801091750--
GURA351605:0:Tyes98620101111
GVIO251221:0:Tyes0-3135---
HARS204773:0:Tyes09589596506511
HAUR316274:2:Tyes632-209934430-
HCHE349521:0:Tyes480041854184104801
HDUC233412:0:Tyes0246245--1
HHAL349124:0:Tyes-105625611347
HINF281310:0:Tyes5720---573
HINF374930:0:Tyes10610---1060
HINF71421:0:Tno5640---565
HMOD498761:0:Tyes626191019030--
HNEP81032:0:Tyes8107--
HSOM205914:1:Tyes1542541--0
HSOM228400:0:Tno53501--536
ILOI283942:0:Tyes200601215621552007
JSP290400:1:Tyes0891-2
JSP375286:0:Tyes0184718467867871
KPNE272620:2:Tyes08848855004991
KRAD266940:2:Fyes--0---
LACI272621:0:Tyes0-----
LBIF355278:2:Tyes-0----
LBIF456481:2:Tno-0----
LBOR355276:1:Tyes-0----
LBOR355277:1:Tno-0----
LBRE387344:2:Tyes0-----
LCAS321967:1:Tyes0-----
LCHO395495:0:Tyes123602359307430750
LDEL321956:0:Tyes0-----
LDEL390333:0:Tyes0-----
LGAS324831:0:Tyes0-----
LHEL405566:0:Tyes0-----
LINN272626:1:Tno01086----
LINT189518:1:Tyes-0-2399--
LINT267671:1:Tno-0-851--
LINT363253:3:Tyes---2010-
LJOH257314:0:Tyes0-----
LLAC272622:5:Tyes0-----
LLAC272623:0:Tyes0-----
LMON169963:0:Tno01084----
LMON265669:0:Tyes01062----
LPLA220668:0:Tyes0-----
LPNE272624:0:Tno-01--532
LPNE297245:1:Fno-01--575
LPNE297246:1:Fyes-01--595
LPNE400673:0:Tno-01--2692
LREU557436:0:Tyes0-----
LSAK314315:0:Tyes0-----
LSPH444177:1:Tyes0-4176---
LWEL386043:0:Tyes01119----
LXYL281090:0:Tyes0-660---
MABS561007:1:Tyes--0---
MACE188937:0:Tyes0-----
MAER449447:0:Tyes--0---
MAQU351348:2:Tyes265619811980102657
MAVI243243:0:Tyes--0---
MBAR269797:1:Tyes0-----
MBOV233413:0:Tno--0---
MBOV410289:0:Tno--0---
MBUR259564:0:Tyes0-----
MCAP243233:0:Tyes02312307697681
MCAP340047:0:Tyes0-----
MEXT419610:0:Tyes067122
MFLA265072:0:Tyes112361235209320940
MFLO265311:0:Tyes0-----
MGIL350054:3:Tyes0-2315---
MLEP272631:0:Tyes--0---
MLOT266835:2:Tyes067122
MMAG342108:0:Tyes078122
MMAR394221:0:Tyes08911093-
MMAZ192952:0:Tyes0-----
MMYC272632:0:Tyes0-----
MPET420662:1:Tyes01501150015821581-
MSME246196:0:Tyes--0---
MSP164756:1:Tno--0---
MSP164757:0:Tno--0---
MSP189918:2:Tyes--0---
MSP266779:3:Tyes810766
MSP400668:0:Tyes228819361935102289
MSP409:2:Tyes01314122
MSUC221988:0:Tyes110141015--0
MTBCDC:0:Tno--0---
MTBRV:0:Tno--0---
MTHE264732:0:Tyes0945-967--
MTUB336982:0:Tno--0---
MTUB419947:0:Tyes--0---
MVAN350058:0:Tyes--0---
MXAN246197:0:Tyes5001-22421320-
NARO279238:0:Tyes056122
NEUR228410:0:Tyes0416415--1
NEUT335283:2:Tyes24501--246
NFAR247156:2:Tyes0-3260---
NGON242231:0:Tyes0163502--1
NHAM323097:2:Tyes067122
NMEN122586:0:Tno6420284--641
NMEN122587:0:Tyes6200443--619
NMEN272831:0:Tno5570407--556
NMEN374833:0:Tno6080437--607
NMUL323848:3:Tyes0315314--1
NOCE323261:1:Tyes-15141513--0
NSEN222891:0:Tyes0-----
NSP103690:6:Tyes0-2661---
NSP35761:1:Tyes0-1904---
NSP387092:0:Tyes0-----
NWIN323098:0:Tyes067122
OANT439375:5:Tyes0141140122
OCAR504832:0:Tyes067122
OIHE221109:0:Tyes-01345--
OTSU357244:0:Fyes0-----
PACN267747:0:Tyes--0---
PAER208963:0:Tyes096952782791
PAER208964:0:Tno094932742751
PARC259536:0:Tyes9445650-11841117
PATL342610:0:Tyes1373637377607610
PCAR338963:0:Tyes6990751700701701
PCRY335284:1:Tyes68010930131413151248
PDIS435591:0:Tyes3059-3159-0-
PENT384676:0:Tyes421042864285104211
PFLU205922:0:Tyes27818418510277
PFLU216595:1:Tyes25917117210258
PFLU220664:0:Tyes28918919010288
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