CANDIDATE ID: 484

CANDIDATE ID: 484

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9953500e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    5.0000000e-1

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- G6851 (ynfK) (b1593)
   Products of gene:
     - G6851-MONOMER (predicted dethiobiotin synthetase)

- EG10512 (kbl) (b3617)
   Products of gene:
     - AKBLIG-MONOMER (Kbl)
     - AKBLIG-CPLX (2-amino-3-ketobutyrate CoA ligase)
       Reactions:
        glycine + acetyl-CoA  =  2-amino-3-oxobutanoate + coenzyme A + H+
         In pathways
         THREOCAT-PWY (superpathway of threonine metabolism)
         THREONINE-DEG2-PWY (threonine degradation II)

- EG10121 (bioF) (bioF)
   Products of gene:
     - 7KAPSYN-MONOMER (8-amino-7-oxononanoate synthase monomer)
     - 7KAPSYN-CPLX (8-amino-7-oxononanoate synthase)
       Reactions:
        a pimeloyl-[acp] + L-alanine + H+  ->  7-keto-8-aminopelargonate + CO2 + a holo-[acp]
         In pathways
         BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I)
         PWY-6519 (7-keto-8-aminopelargonate biosynthesis I)
        L-alanine + pimeloyl-CoA + H+  ->  CO2 + 7-keto-8-aminopelargonate + coenzyme A
         In pathways
         PWY-5005 (PWY-5005)
         PWY-6578 (PWY-6578)

- EG10120 (bioD) (bioD)
   Products of gene:
     - DETHIOBIOTIN-SYN-MONOMER (dethiobiotin synthetase monomer)
     - DETHIOBIOTIN-SYN-CPLX (dethiobiotin synthetase)
       Reactions:
        CO2 + 7,8-diaminopelargonate + ATP  ->  dethiobiotin + phosphate + ADP + 4 H+
         In pathways
         BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I)
         PWY0-1507 (biotin biosynthesis from 7-keto-8-aminopelargonate)

- EG10119 (bioC) (bioC)
   Products of gene:
     - EG10119-MONOMER (BioC methyltransferase)
       Reactions:
        malonyl-CoA + S-adenosyl-L-methionine  ->  malonyl-CoA methyl ester + S-adenosyl-L-homocysteine
         In pathways
         BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I)
         PWY-6519 (7-keto-8-aminopelargonate biosynthesis I)

- EG10118 (bioB) (bioB)
   Products of gene:
     - BIOTIN-SYN-MONOMER (biotin synthase monomer)
     - BIOTIN-SYN-CPLX (biotin synthase)
       Reactions:
        a sulfurated sulfur donor + dethiobiotin + 2 S-adenosyl-L-methionine  ->  an unsulfurated sulfur acceptor + biotin + 2 5'-deoxyadenosine + 2 L-methionine
         In pathways
         BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I)
         PWY0-1507 (biotin biosynthesis from 7-keto-8-aminopelargonate)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 230
Effective number of orgs (counting one per cluster within 468 clusters): 158

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM45
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola6
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A6
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110186
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103316
XFAS405440 ncbi Xylella fastidiosa M126
XFAS183190 ncbi Xylella fastidiosa Temecula16
XFAS160492 ncbi Xylella fastidiosa 9a5c6
XCAM487884 Xanthomonas campestris pv. paulliniae6
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-106
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80046
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339136
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3066
XAUT78245 ncbi Xanthobacter autotrophicus Py25
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1145
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TTUR377629 ncbi Teredinibacter turnerae T79016
TERY203124 ncbi Trichodesmium erythraeum IMS1015
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252596
TCRU317025 ncbi Thiomicrospira crunogena XCL-26
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
SSP94122 ncbi Shewanella sp. ANA-36
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB36
SPRO399741 ncbi Serratia proteamaculans 5686
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SONE211586 ncbi Shewanella oneidensis MR-16
SLOI323850 ncbi Shewanella loihica PV-46
SLAC55218 Ruegeria lacuscaerulensis5
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB5
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23385
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SELO269084 ncbi Synechococcus elongatus PCC 63015
SDYS300267 ncbi Shigella dysenteriae Sd1976
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-406
SCO ncbi Streptomyces coelicolor A3(2)6
SBOY300268 ncbi Shigella boydii Sb2276
SBAL402882 ncbi Shewanella baltica OS1856
SBAL399599 ncbi Shewanella baltica OS1956
SAVE227882 ncbi Streptomyces avermitilis MA-46806
RSP101510 ncbi Rhodococcus jostii RHA15
RSOL267608 ncbi Ralstonia solanacearum GMI10006
RPAL316058 ncbi Rhodopseudomonas palustris HaA25
RPAL316056 ncbi Rhodopseudomonas palustris BisB186
RPAL316055 ncbi Rhodopseudomonas palustris BisA535
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH346
REUT381666 ncbi Ralstonia eutropha H166
REUT264198 ncbi Ralstonia eutropha JMP1346
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PSP296591 ncbi Polaromonas sp. JS6666
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PPRO298386 ncbi Photobacterium profundum SS96
PNAP365044 ncbi Polaromonas naphthalenivorans CJ25
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PING357804 ncbi Psychromonas ingrahamii 376
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PGIN242619 ncbi Porphyromonas gingivalis W836
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PDIS435591 ncbi Parabacteroides distasonis ATCC 85036
PCAR338963 ncbi Pelobacter carbinolicus DSM 23805
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
OCAR504832 ncbi Oligotropha carboxidovorans OM56
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NPHA348780 ncbi Natronomonas pharaonis DSM 21605
NOCE323261 ncbi Nitrosococcus oceani ATCC 197076
NMUL323848 ncbi Nitrosospira multiformis ATCC 251966
NFAR247156 ncbi Nocardia farcinica IFM 101525
NEUT335283 ncbi Nitrosomonas eutropha C916
NEUR228410 ncbi Nitrosomonas europaea ATCC 197186
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124445
MXAN246197 ncbi Myxococcus xanthus DK 16226
MSP400668 ncbi Marinomonas sp. MWYL16
MPET420662 ncbi Methylibium petroleiphilum PM15
MMAG342108 ncbi Magnetospirillum magneticum AMB-15
MLOT266835 ncbi Mesorhizobium loti MAFF3030996
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK5
MFLA265072 ncbi Methylobacillus flagellatus KT6
MEXT419610 ncbi Methylobacterium extorquens PA15
MCAP243233 ncbi Methylococcus capsulatus Bath6
MAQU351348 ncbi Marinobacter aquaeolei VT86
LSPH444177 ncbi Lysinibacillus sphaericus C3-416
LPNE400673 ncbi Legionella pneumophila Corby6
LPNE297246 ncbi Legionella pneumophila Paris6
LPNE297245 ncbi Legionella pneumophila Lens6
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 16
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-005
LCHO395495 ncbi Leptothrix cholodnii SP-65
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille6
ILOI283942 ncbi Idiomarina loihiensis L2TR6
HMUK485914 ncbi Halomicrobium mukohataei DSM 122866
HHAL349124 ncbi Halorhodospira halophila SL16
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23966
HARS204773 ncbi Herminiimonas arsenicoxydans6
GVIO251221 ncbi Gloeobacter violaceus PCC 74215
GURA351605 ncbi Geobacter uraniireducens Rf46
GSUL243231 ncbi Geobacter sulfurreducens PCA6
GOXY290633 ncbi Gluconobacter oxydans 621H6
GMET269799 ncbi Geobacter metallireducens GS-156
GKAU235909 ncbi Geobacillus kaustophilus HTA4266
GBET391165 ncbi Granulibacter bethesdensis CGDNIH15
ESP42895 Enterobacter sp.6
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DARO159087 ncbi Dechloromonas aromatica RCB6
CVIO243365 ncbi Chromobacterium violaceum ATCC 124726
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA6
CTEP194439 ncbi Chlorobium tepidum TLS6
CSP78 Caulobacter sp.6
CSAL290398 ncbi Chromohalobacter salexigens DSM 30436
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)6
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CJAP155077 Cellvibrio japonicus6
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C6
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1116
CBUR227377 ncbi Coxiella burnetii RSA 4936
CAULO ncbi Caulobacter crescentus CB155
BWEI315730 ncbi Bacillus weihenstephanensis KBAB46
BVIE269482 ncbi Burkholderia vietnamiensis G46
BTHU412694 ncbi Bacillus thuringiensis Al Hakam6
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-276
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54825
BTHA271848 ncbi Burkholderia thailandensis E2646
BSUI470137 ncbi Brucella suis ATCC 234456
BSUI204722 ncbi Brucella suis 13306
BSUB ncbi Bacillus subtilis subtilis 1685
BSP36773 Burkholderia sp.6
BPSE320373 ncbi Burkholderia pseudomallei 6686
BPSE320372 ncbi Burkholderia pseudomallei 1710b6
BPSE272560 ncbi Burkholderia pseudomallei K962436
BPET94624 Bordetella petrii6
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BOVI236 Brucella ovis6
BMEL359391 ncbi Brucella melitensis biovar Abortus 23086
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M6
BMAL320389 ncbi Burkholderia mallei NCTC 102476
BMAL320388 ncbi Burkholderia mallei SAVP16
BMAL243160 ncbi Burkholderia mallei ATCC 233446
BLIC279010 ncbi Bacillus licheniformis ATCC 145806
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1106
BHAL272558 ncbi Bacillus halodurans C-1256
BFRA295405 ncbi Bacteroides fragilis YCH465
BFRA272559 ncbi Bacteroides fragilis NCTC 93435
BCIC186490 Candidatus Baumannia cicadellinicola5
BCER572264 ncbi Bacillus cereus 03BB1026
BCER405917 Bacillus cereus W6
BCER315749 ncbi Bacillus cytotoxicus NVH 391-986
BCER288681 ncbi Bacillus cereus E33L6
BCER226900 ncbi Bacillus cereus ATCC 145796
BCEN331272 ncbi Burkholderia cenocepacia HI24246
BCEN331271 ncbi Burkholderia cenocepacia AU 10546
BCAN483179 ncbi Brucella canis ATCC 233656
BBRO257310 ncbi Bordetella bronchiseptica RB505
BANT592021 ncbi Bacillus anthracis A02486
BANT568206 ncbi Bacillus anthracis CDC 6846
BANT261594 ncbi Bacillus anthracis Ames Ancestor6
BANT260799 ncbi Bacillus anthracis Sterne6
BAMY326423 ncbi Bacillus amyloliquefaciens FZB425
BAMB398577 ncbi Burkholderia ambifaria MC40-66
BAMB339670 ncbi Burkholderia ambifaria AMMD6
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9416
ASP76114 ncbi Aromatoleum aromaticum EbN16
ASP62928 ncbi Azoarcus sp. BH726
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AHYD196024 Aeromonas hydrophila dhakensis6
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232706
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-16
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C6
ACRY349163 ncbi Acidiphilium cryptum JF-55
ABOR393595 ncbi Alcanivorax borkumensis SK26
ABAU360910 ncbi Bordetella avium 197N5
AAVE397945 ncbi Acidovorax citrulli AAC00-16
AAUR290340 ncbi Arthrobacter aurescens TC15


Names of the homologs of the genes in the group in each of these orgs
  G6851   EG10512   EG10121   EG10120   EG10119   EG10118   
ZMOB264203 ZMO1915ZMO1270ZMO1917ZMO1915ZMO0094
YPSE349747 YPSIP31758_1868YPSIP31758_0071YPSIP31758_2843YPSIP31758_2841YPSIP31758_2842YPSIP31758_2844
YPSE273123 YPTB2191YPTB0056YPTB1183YPTB1185YPTB1184YPTB1182
YPES386656 YPDSF_0864YPDSF_3846YPDSF_2545YPDSF_2543YPDSF_2544YPDSF_2546
YPES377628 YPN_1741YPN_3791YPN_2849YPN_2847YPN_2848YPN_2850
YPES360102 YPA_1629YPA_3483YPA_1059YPA_1061YPA_1060YPA_1058
YPES349746 YPANGOLA_A1428YPANGOLA_A0065YPANGOLA_A1426YPANGOLA_A1428YPANGOLA_A1427YPANGOLA_A1425
YPES214092 YPO2269YPO0059YPO1152YPO1154YPO1153YPO1151
YPES187410 Y2111Y0081Y3030Y3028Y3029Y3031
YENT393305 YE2024YE0073YE2906YE2904YE2905YE2907
XORY360094 XOOORF_4647XOOORF_4369XOOORF_4929XOOORF_4647XOOORF_0231XOOORF_4930
XORY342109 XOO0697XOO3486XOO0420XOO0697XOO0213XOO0419
XORY291331 XOO0767XOO3691XOO0456XOO0767XOO0233XOO0455
XFAS405440 XFASM12_1637XFASM12_0710XFASM12_0710XFASM12_1637XFASM12_0926XFASM12_0050
XFAS183190 PD_1494PD_0598PD_0598PD_1494PD_0778PD_0043
XFAS160492 XF2477XF1357XF1357XF2477XF2099XF0064
XCAM487884 XCC-B100_3763XCC-B100_3414XCC-B100_0415XCC-B100_3763XCC-B100_0410XCC-B100_0416
XCAM316273 XCAORF_0739XCAORF_1132XCAORF_4125XCAORF_0739XCAORF_4131XCAORF_4124
XCAM314565 XC_3646XC_3296XC_0399XC_3646XC_0395XC_0400
XCAM190485 XCC0587XCC0939XCC0387XCC0587XCC0383XCC0388
XAXO190486 XAC3616XAC1016XAC0387XAC3616XAC0383XAC0388
XAUT78245 XAUT_2919XAUT_3804XAUT_2919XAUT_1142XAUT_1117
VVUL216895 VV1_2940VV2_1484VV1_2942VV1_2940VV1_2941VV1_2943
VVUL196600 VV1330VVA0304VV1328VV1330VV1329VV1327
VPAR223926 VP1116VPA1510VP1114VP1116VP1115VP1113
VFIS312309 VFA0745VFA0418VFA0747VFA0745VFA0746
VCHO345073 VC0395_A0633VC0395_0352VC0395_A0631VC0395_A0633VC0395_A0632VC0395_A0630
VCHO VC1115VCA0886VC1113VC1115VC1114VC1112
TTUR377629 TERTU_0493TERTU_0491TERTU_0491TERTU_0493TERTU_0492TERTU_0490
TERY203124 TERY_1842TERY_0352TERY_1842TERY_1067TERY_3533
TDEN292415 TBD_0323TBD_0669TBD_0320TBD_0323TBD_0322TBD_0319
TCRU317025 TCR_0261TCR_1979TCR_1979TCR_0261TCR_1981TCR_1978
STYP99287 STM1489STM3709STM0795STM0797STM0796STM0794
SSP94122 SHEWANA3_2516SHEWANA3_4104SHEWANA3_2518SHEWANA3_2516SHEWANA3_2517SHEWANA3_2519
SSON300269 SSO_1571SSO_3787SSO_0755SSO_0757SSO_0756SSO_0754
SSED425104 SSED_2773SSED_0101SSED_2775SSED_2773SSED_2774SSED_2776
SPRO399741 SPRO_2284SPRO_4824SPRO_1312SPRO_1314SPRO_1313SPRO_1311
SPEA398579 SPEA_1804SPEA_0107SPEA_1802SPEA_1804SPEA_1803SPEA_1801
SONE211586 SO_2737SO_4674SO_2739SO_2737SO_2738SO_2740
SLOI323850 SHEW_1722SHEW_3709SHEW_1720SHEW_1722SHEW_1721SHEW_1719
SLAC55218 SL1157_A0114SL1157_0815SL1157_0447SL1157_0811SL1157_A0116
SHIGELLA S1746KBLBIOFBIODBIOCBIOB
SHAL458817 SHAL_2474SHAL_4215SHAL_2476SHAL_2474SHAL_2475SHAL_2477
SGLO343509 SG1466SG0904SG0904SG0906SG0905SG0903
SFUM335543 SFUM_2235SFUM_3712SFUM_3711SFUM_3502SFUM_1825
SFLE373384 SFV_1608SFV_3911SFV_0759SFV_0761SFV_0760SFV_0757
SFLE198214 AAN43198.1AAN45104.1AAN42361.1AAN42363.1AAN42362.1AAN42360.1
SERY405948 SACE_0978SACE_6390SACE_4477SACE_0978SACE_4683
SENT454169 SEHA_C1659SEHA_C4034SEHA_C0922SEHA_C0924SEHA_C0923SEHA_C0921
SENT321314 SCH_1507SCH_3632SCH_0793SCH_0795SCH_0794SCH_0792
SENT295319 SPA1365SPA3561SPA1957SPA1955SPA1956SPA1958
SENT220341 STY1575STY4086STY0828STY0830STY0829STY0827
SENT209261 T1410T3810T2092T2090T2091T2093
SELO269084 SYC1467_CSYC1470_CSYC1467_CSYC2343_DSYC1098_D
SDYS300267 SDY_1563SDY_4050SDY_0830SDY_0828SDY_0829SDY_0831
SDEN318161 SDEN_1661SDEN_3615SDEN_1659SDEN_1661SDEN_1660SDEN_1658
SDEG203122 SDE_3135SDE_3138SDE_3138SDE_3135SDE_3137SDE_3139
SCO SCO1246SCO6800SCO5890SCO1246SCO6510SCO1244
SBOY300268 SBO_1543SBO_3623SBO_0663SBO_0665SBO_0664SBO_0662
SBAL402882 SHEW185_1754SHEW185_4340SHEW185_1752SHEW185_1754SHEW185_1753SHEW185_1751
SBAL399599 SBAL195_1798SBAL195_4480SBAL195_1796SBAL195_1798SBAL195_1797SBAL195_1795
SAVE227882 SAV7091SAV1627SAV7094SAV7091SAV664SAV7093
RSP101510 RHA1_RO01053RHA1_RO01054RHA1_RO01053RHA1_RO06721RHA1_RO01043
RSOL267608 RSC1479RSP0961RSC1478RSC1479RSC0360RSC0266
RPAL316058 RPB_4343RPB_3969RPB_3969RPB_4343RPB_3331
RPAL316056 RPC_2098RPC_1325RPC_1325RPC_2098RPC_2136RPC_3236
RPAL316055 RPE_3401RPE_1359RPE_1359RPE_3401RPE_2208
RPAL258594 RPA1554RPA1554RPA2971RPA1615RPA2045
RMET266264 RMET_0116RMET_4805RMET_0115RMET_0116RMET_0259RMET_0117
REUT381666 H16_A0182H16_B0819H16_A0181H16_A0182H16_A0340H16_A0183
REUT264198 REUT_A0149REUT_B4803REUT_A0148REUT_A0149REUT_A0312REUT_A0150
PSYR223283 PSPTO_0498PSPTO_0495PSPTO_0495PSPTO_0498PSPTO_0497PSPTO_0494
PSYR205918 PSYR_4683PSYR_4686PSYR_4686PSYR_4683PSYR_4684PSYR_4687
PSTU379731 PST_3862PST_3865PST_3865PST_3862PST_3863PST_3866
PSP312153 PNUC_0153PNUC_0154PNUC_0154PNUC_0153PNUC_0156
PSP296591 BPRO_0899BPRO_4366BPRO_1579BPRO_0899BPRO_3929BPRO_1580
PPUT76869 PPUTGB1_0396PPUTGB1_0393PPUTGB1_0393PPUTGB1_0396PPUTGB1_0395PPUTGB1_0392
PPUT351746 PPUT_0392PPUT_0389PPUT_0389PPUT_0392PPUT_0391PPUT_0388
PPUT160488 PP_0366PP_0363PP_0363PP_0366PP_0365PP_0362
PPRO298386 PBPRA2326PBPRA1729PBPRA2328PBPRA2326PBPRA2327PBPRA2329
PNAP365044 PNAP_4031PNAP_4032PNAP_4032PNAP_4031PNAP_4030
PMEN399739 PMEN_4084PMEN_4087PMEN_4087PMEN_4084PMEN_4085PMEN_4088
PLUM243265 PLU2227PLU4846PLU1486PLU1488PLU1487PLU1485
PING357804 PING_1921PING_1852PING_1923PING_1921PING_1922PING_1924
PHAL326442 PSHAA1606PSHAA2316PSHAA1608PSHAA1606PSHAA1607PSHAA1609
PGIN242619 PG_2053PG_0481PG_1780PG_2053PG_1619PG_2081
PFLU220664 PFL_5689PFL_5692PFL_5692PFL_5689PFL_5690PFL_5693
PFLU216595 PFLU5611PFLU5614PFLU5614PFLU5611PFLU5612PFLU5615
PFLU205922 PFL_5172PFL_5175PFL_5175PFL_5172PFL_5173PFL_5176
PENT384676 PSEEN5117PSEEN5120PSEEN5120PSEEN5117PSEEN5118PSEEN5121
PDIS435591 BDI_1918BDI_1237BDI_2951BDI_1918BDI_1917BDI_1913
PCAR338963 PCAR_1459PCAR_1665PCAR_1665PCAR_1459PCAR_1663
PATL342610 PATL_2554PATL_0061PATL_2556PATL_2554PATL_2555PATL_2557
PAER208964 PA0504PA0501PA0501PA0504PA0503PA0500
PAER208963 PA14_06570PA14_06510PA14_06510PA14_06570PA14_06540PA14_06500
OCAR504832 OCAR_6727OCAR_4706OCAR_6726OCAR_6727OCAR_4676OCAR_4707
OANT439375 OANT_2821OANT_2822OANT_2821OANT_0127OANT_2823
NPHA348780 NP4230ANP4232ANP4230ANP0956ANP4236A
NOCE323261 NOC_2097NOC_2100NOC_2100NOC_2097NOC_2098NOC_2101
NMUL323848 NMUL_A1133NMUL_A1130NMUL_A1130NMUL_A1133NMUL_A1132NMUL_A1129
NFAR247156 NFA18200NFA18190NFA18200NFA1190NFA18320
NEUT335283 NEUT_2134NEUT_2137NEUT_2137NEUT_2134NEUT_2135NEUT_2138
NEUR228410 NE2296NE2299NE2299NE2296NE2297NE2300
NARO279238 SARO_0717SARO_3111SARO_0718SARO_0717SARO_0719
MXAN246197 MXAN_1259MXAN_3748MXAN_1258MXAN_1259MXAN_2243MXAN_1257
MSP400668 MMWYL1_3453MMWYL1_3792MMWYL1_3456MMWYL1_3453MMWYL1_3454MMWYL1_3457
MPET420662 MPE_A0529MPE_A0530MPE_A0530MPE_A0529MPE_A1786
MMAG342108 AMB2762AMB1683AMB2759AMB2761AMB2757
MLOT266835 MLL5829MLL9204MLL9099MLL6005MLL3908MLL5831
MGIL350054 MFLV_3627MFLV_3628MFLV_3627MFLV_4692MFLV_3624
MFLA265072 MFLA_2160MFLA_2163MFLA_2163MFLA_2160MFLA_2161MFLA_2164
MEXT419610 MEXT_2332MEXT_0857MEXT_2332MEXT_4752MEXT_4006
MCAP243233 MCA_1129MCA_1126MCA_1126MCA_1129MCA_1128MCA_1125
MAQU351348 MAQU_2753MAQU_2755MAQU_2755MAQU_2753MAQU_2754MAQU_2756
LSPH444177 BSPH_3470BSPH_0909BSPH_0909BSPH_3470BSPH_1760BSPH_3466
LPNE400673 LPC_0889LPC_2593LPC_0887LPC_0889LPC_1798LPC_0886
LPNE297246 LPP1431LPP0756LPP1429LPP1431LPP2279LPP1428
LPNE297245 LPL1553LPL0738LPL1555LPL1553LPL2251LPL1556
LPNE272624 LPG1475LPG0701LPG1473LPG1475LPG2331LPG1472
LINT363253 LI0425LI0421LI0425LI0424LI0420
LCHO395495 LCHO_3643LCHO_3642LCHO_3642LCHO_3643LCHO_3644
KPNE272620 GKPORF_B0573GKPORF_B3323GKPORF_B5227GKPORF_B5229GKPORF_B5228GKPORF_B5226
JSP375286 MMA_0122MMA_0121MMA_0121MMA_0122MMA_3154MMA_0123
ILOI283942 IL1321IL0270IL1323IL1321IL1322IL1324
HMUK485914 HMUK_2293HMUK_2294HMUK_2294HMUK_2293HMUK_1274HMUK_2296
HHAL349124 HHAL_0959HHAL_0962HHAL_0962HHAL_0959HHAL_0960HHAL_0963
HDUC233412 HD_1480HD_1684HD_1480HD_1681HD_1007
HCHE349521 HCH_05366HCH_01633HCH_05370HCH_05366HCH_05368HCH_05371
HARS204773 HEAR0101HEAR1669HEAR1669HEAR0101HEAR1671HEAR0102
GVIO251221 GLL0397GLL0397GLL3509GLL1483GLR4328
GURA351605 GURA_2243GURA_3246GURA_3246GURA_2243GURA_3244GURA_2242
GSUL243231 GSU_1583GSU_2629GSU_2629GSU_1583GSU_2627GSU_1584
GOXY290633 GOX0723GOX1636GOX0720GOX0723GOX0722GOX2031
GMET269799 GMET_1581GMET_0842GMET_0842GMET_1581GMET_0844GMET_1582
GKAU235909 GK3017GK2128GK2128GK3017GK1582GK1570
GBET391165 GBCGDNIH1_0496GBCGDNIH1_0498GBCGDNIH1_0496GBCGDNIH1_0593GBCGDNIH1_0499
ESP42895 ENT638_1920ENT638_0118ENT638_1267ENT638_1269ENT638_1268ENT638_1266
EFER585054 EFER_1443EFER_3907EFER_2337EFER_2334EFER_2335EFER_2338
ECOO157 Z2585KBLBIOFBIODBIOCBIOB
ECOL83334 ECS2299ECS4495ECS0854ECS0856ECS0855ECS0853
ECOL585397 ECED1_1762ECED1_4303ECED1_0740ECED1_0742ECED1_0741ECED1_0739
ECOL585057 ECIAI39_1465ECIAI39_4138ECIAI39_0752ECIAI39_0754ECIAI39_0753ECIAI39_0751
ECOL585056 ECUMN_1878ECUMN_4134ECUMN_0918ECUMN_0920ECUMN_0919ECUMN_0917
ECOL585055 EC55989_1758EC55989_4084EC55989_0819EC55989_0821EC55989_0820EC55989_0818
ECOL585035 ECS88_1638ECS88_4034ECS88_0793ECS88_0795ECS88_0794ECS88_0792
ECOL585034 ECIAI1_1643ECIAI1_3790ECIAI1_0811ECIAI1_0813ECIAI1_0812ECIAI1_0810
ECOL481805 ECOLC_2037ECOLC_0091ECOLC_2867ECOLC_2865ECOLC_2866ECOLC_2868
ECOL469008 ECBD_2053ECBD_0108ECBD_2847ECBD_2845ECBD_2846ECBD_2848
ECOL439855 ECSMS35_1608ECSMS35_3954ECSMS35_0799ECSMS35_0801ECSMS35_0800ECSMS35_0798
ECOL413997 ECB_01562ECB_03475ECB_00743ECB_00745ECB_00744ECB_00742
ECOL409438 ECSE_1714ECSE_3900ECSE_0829ECSE_0831ECSE_0830ECSE_0828
ECOL405955 APECO1_676APECO1_2838APECO1_1313APECO1_1311APECO1_1312APECO1_1314
ECOL364106 UTI89_C1780UTI89_C4163UTI89_C0774UTI89_C0776UTI89_C0775UTI89_C0773
ECOL362663 ECP_1537ECP_3718ECP_0790ECP_0792ECP_0791ECP_0789
ECOL331111 ECE24377A_1799ECE24377A_4121ECE24377A_0839ECE24377A_0841ECE24377A_0840ECE24377A_0838
ECOL316407 ECK1588:JW5264:B1593ECK3607:JW3592:B3617ECK0765:JW0759:B0776ECK0767:JW0761:B0778ECK0766:JW0760:B0777ECK0764:JW0758:B0775
ECOL199310 C1984C4444C0856C0858C0857C0855
ECAR218491 ECA2257ECA0167ECA2824ECA2822ECA2823ECA2825
DARO159087 DARO_2900DARO_2897DARO_2897DARO_2900DARO_2899DARO_0618
CVIO243365 CV_0598CV_1650CV_4380CV_0598CV_4376CV_4381
CVES412965 COSY_0007COSY_0760COSY_0760COSY_0007COSY_0243COSY_0459
CTEP194439 CT_0048CT_1951CT_0051CT_0048CT_0049CT_0052
CSP78 CAUL_2876CAUL_5431CAUL_2875CAUL_2876CAUL_1979CAUL_4625
CSAL290398 CSAL_1163CSAL_1166CSAL_1166CSAL_1163CSAL_1164CSAL_1167
CRUT413404 RMAG_0007RMAG_0835RMAG_0835RMAG_0007RMAG_0257RMAG_0499
CPSY167879 CPS_2597CPS_0120CPS_2595CPS_2597CPS_2596CPS_2594
CJAP155077 CJA_0429CJA_0427CJA_0427CJA_0429CJA_0428CJA_0426
CDES477974 DAUD_1327DAUD_1326DAUD_1326DAUD_1327DAUD_1458DAUD_1331
CBUR434922 COXBU7E912_1045COXBU7E912_1996COXBU7E912_1041COXBU7E912_1045COXBU7E912_1611COXBU7E912_1040
CBUR227377 CBU_1003CBU_0111CBU_1006CBU_1003CBU_0467CBU_1007
CAULO CC1575CC1162CC1576CC1575CC3521
BWEI315730 BCERKBAB4_3950BCERKBAB4_0534BCERKBAB4_3949BCERKBAB4_3950BCERKBAB4_3947BCERKBAB4_3946
BVIE269482 BCEP1808_3028BCEP1808_3788BCEP1808_3027BCEP1808_3028BCEP1808_2949BCEP1808_3029
BTHU412694 BALH_3734BALH_0558BALH_3733BALH_3734BALH_3731BALH_3730
BTHU281309 BT9727_3860BT9727_0530BT9727_3859BT9727_3860BT9727_3857BT9727_3856
BTHE226186 BT_1446BT_1371BT_1443BT_1446BT_1442
BTHA271848 BTH_I0338BTH_II0005BTH_I0339BTH_I0338BTH_I2377BTH_I0337
BSUI470137 BSUIS_B0490BSUIS_A0348BSUIS_B0491BSUIS_B0490BSUIS_A0119BSUIS_B0492
BSUI204722 BR_A0490BR_0319BR_A0491BR_A0490BR_0114BR_A0492
BSUB BSU30210BSU17000BSU30220BSU30210BSU30200
BSP36773 BCEP18194_A6277BCEP18194_B3179BCEP18194_A6276BCEP18194_A6277BCEP18194_B0726BCEP18194_A6278
BPSE320373 BURPS668_0389BURPS668_A0005BURPS668_0390BURPS668_0389BURPS668_3033BURPS668_0388
BPSE320372 BURPS1710B_A0609BURPS1710B_B1775BURPS1710B_A0610BURPS1710B_A0609BURPS1710B_A3376BURPS1710B_A0608
BPSE272560 BPSL0365BPSS0005BPSL0366BPSL0365BPSL2640BPSL0364
BPET94624 BPET0009BPET0010BPET0010BPET0009BPET0495BPET3663
BPER257313 BP2162BP2164BP2162BP2162BP2718
BPAR257311 BPP1773BPP1775BPP1773BPP1773BPP1121
BOVI236 GBOORFA0477GBOORF0347GBOORFA0478GBOORFA0477GBOORF0118GBOORFA0479
BMEL359391 BAB2_0746BAB1_0349BAB2_0745BAB2_0746BAB1_0111BAB2_0744
BMEL224914 BMEII0777BMEI1604BMEII0776BMEII0777BMEI1834BMEII0775
BMAL320389 BMA10247_2270BMA10247_A0006BMA10247_2271BMA10247_2270BMA10247_2034BMA10247_2269
BMAL320388 BMASAVP1_A3078BMASAVP1_1151BMASAVP1_A3079BMASAVP1_A3078BMASAVP1_A0747BMASAVP1_A3077
BMAL243160 BMA_0102BMA_A0005BMA_0101BMA_0102BMA_2164BMA_0103
BLIC279010 BL00955BL03659BL00954BL00955BL05017BL00956
BJAP224911 BLR2098BLL1200BLR2097BLR2098BLR0060BLR2095
BHAL272558 BH0783BH3907BH3907BH0783BH3909BH1748
BFRA295405 BF1600BF2988BF1602BF1600BF1603
BFRA272559 BF1614BF2864BF1616BF1614BF1617
BCIC186490 BCI_0249BCI_0247BCI_0249BCI_0248BCI_0246
BCER572264 BCA_4231BCA_0654BCA_4230BCA_4231BCA_4228BCA_4227
BCER405917 BCE_4188BCE_0688BCE_4187BCE_4188BCE_4185BCE_4184
BCER315749 BCER98_2817BCER98_0533BCER98_2816BCER98_2817BCER98_2814BCER98_2813
BCER288681 BCE33L3874BCE33L0530BCE33L3873BCE33L3874BCE33L3871BCE33L3870
BCER226900 BC_4118BC_0621BC_4117BC_4118BC_4115BC_4114
BCEN331272 BCEN2424_2933BCEN2424_5701BCEN2424_2932BCEN2424_2933BCEN2424_4343BCEN2424_2934
BCEN331271 BCEN_2319BCEN_5158BCEN_2318BCEN_2319BCEN_4023BCEN_2320
BCAN483179 BCAN_B0492BCAN_A0328BCAN_B0493BCAN_B0492BCAN_A0117BCAN_B0494
BBRO257310 BB3335BB3333BB3335BB3335BB1337
BANT592021 BAA_4362BAA_0702BAA_4361BAA_4362BAA_4359BAA_4358
BANT568206 BAMEG_4380BAMEG_3967BAMEG_4379BAMEG_4380BAMEG_4377BAMEG_4376
BANT261594 GBAA4340GBAA0620GBAA4339GBAA4340GBAA4337GBAA4336
BANT260799 BAS4027BAS0586BAS4026BAS4027BAS4024BAS4023
BAMY326423 RBAM_018260RBAM_016840RBAM_018270RBAM_018260RBAM_018250
BAMB398577 BAMMC406_2845BAMMC406_3115BAMMC406_2844BAMMC406_2845BAMMC406_4895BAMMC406_2846
BAMB339670 BAMB_2982BAMB_4972BAMB_2981BAMB_2982BAMB_5124BAMB_2983
BABO262698 BRUAB2_0732BRUAB1_0345BRUAB2_0731BRUAB2_0732BRUAB1_0111BRUAB2_0730
ASP76114 EBA6011EBA6018EBA6018EBA6011EBA6013EBA1066
ASP62928 AZO1892AZO1889AZO1889AZO1892AZO1891AZO2817
ASAL382245 ASA_2874ASA_0091ASA_2876ASA_2874ASA_2875ASA_2877
APLE434271 APJL_0609APJL_0951APJL_0609APJL_0949APJL_0118
APLE416269 APL_0614APL_0941APL_0614APL_0939APL_0117
AHYD196024 AHA_1492AHA_4234AHA_1490AHA_1492AHA_1491AHA_1489
AFER243159 AFE_2782AFE_2785AFE_2785AFE_2782AFE_2783AFE_2769
AEHR187272 MLG_0292MLG_2435MLG_2435MLG_0292MLG_2433MLG_2436
ADEH290397 ADEH_0070ADEH_2094ADEH_3452ADEH_0070ADEH_3733ADEH_3453
ACRY349163 ACRY_1867ACRY_1868ACRY_1868ACRY_1867ACRY_1869
ABOR393595 ABO_2216ABO_2219ABO_2219ABO_2216ABO_2217ABO_2220
ABAU360910 BAV2451BAV2449BAV2449BAV2451BAV0831
AAVE397945 AAVE_3842AAVE_3843AAVE_3843AAVE_3842AAVE_2207AAVE_2518
AAUR290340 AAUR_1087AAUR_1460AAUR_1088AAUR_1087AAUR_1091


Organism features enriched in list (features available for 218 out of the 230 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00239282392
Disease:Brucellosis 0.007101555
Disease:Bubonic_plague 0.002617066
Disease:Dysentery 0.002617066
Disease:Gastroenteritis 0.00345211013
Endospores:No 5.239e-1635211
GC_Content_Range4:0-40 2.965e-2623213
GC_Content_Range4:40-60 8.230e-9116224
GC_Content_Range4:60-100 6.217e-779145
GC_Content_Range7:30-40 6.318e-1523166
GC_Content_Range7:50-60 7.946e-1068107
GC_Content_Range7:60-70 8.140e-774134
Genome_Size_Range5:0-2 7.824e-324155
Genome_Size_Range5:2-4 0.000013451197
Genome_Size_Range5:4-6 2.421e-29130184
Genome_Size_Range5:6-10 1.577e-63347
Genome_Size_Range9:0-1 0.0000385127
Genome_Size_Range9:1-2 7.573e-263128
Genome_Size_Range9:2-3 2.758e-624120
Genome_Size_Range9:4-5 3.195e-75896
Genome_Size_Range9:5-6 1.760e-207288
Genome_Size_Range9:6-8 0.00004642638
Gram_Stain:Gram_Neg 3.578e-17172333
Gram_Stain:Gram_Pos 6.331e-1026150
Habitat:Host-associated 0.001866562206
Habitat:Multiple 0.005221379178
Habitat:Specialized 0.00132381053
Habitat:Terrestrial 0.00032222131
Motility:No 6.061e-1223151
Motility:Yes 8.043e-13141267
Optimal_temp.:- 0.0010015113257
Optimal_temp.:25-30 0.00018811519
Oxygen_Req:Anaerobic 2.862e-815102
Oxygen_Req:Facultative 8.003e-699201
Pathogenic_in:Animal 0.00900003366
Pathogenic_in:No 0.002691070226
Pathogenic_in:Plant 0.00382511115
Shape:Coccus 2.753e-11682
Shape:Rod 2.605e-20181347
Shape:Sphere 0.0076494219
Shape:Spiral 0.0001100334
Temp._range:Mesophilic 0.0001340193473
Temp._range:Thermophilic 0.0000732335



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 198
Effective number of orgs (counting one per cluster within 468 clusters): 161

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis0
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
VEIS391735 ncbi Verminephrobacter eiseniae EF01-20
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TSP28240 Thermotoga sp.0
TROS309801 ncbi Thermomicrobium roseum DSM 51590
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TMAR243274 ncbi Thermotoga maritima MSB80
TLET416591 ncbi Thermotoga lettingae TMO1
TFUS269800 ncbi Thermobifida fusca YX0
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen0
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-90
STHE299768 ncbi Streptococcus thermophilus CNRZ10660
STHE264199 ncbi Streptococcus thermophilus LMG 183110
SSUI391296 ncbi Streptococcus suis 98HAH330
SSUI391295 ncbi Streptococcus suis 05ZYH330
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)0
SSP321327 ncbi Synechococcus sp. JA-3-3Ab1
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE488221 ncbi Streptococcus pneumoniae 705850
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-60
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-140
SPNE171101 ncbi Streptococcus pneumoniae R60
SPNE170187 ncbi Streptococcus pneumoniae G540
SPNE1313 Streptococcus pneumoniae0
SMUT210007 ncbi Streptococcus mutans UA1590
SMAR399550 ncbi Staphylothermus marinus F10
SGOR29390 Streptococcus gordonii Challis0
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RTYP257363 ncbi Rickettsia typhi Wilmington0
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170251
RSP357808 ncbi Roseiflexus sp. RS-11
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU50
RFER338969 ncbi Rhodoferax ferrireducens T1181
RFEL315456 ncbi Rickettsia felis URRWXCal21
RETL347834 ncbi Rhizobium etli CFN 421
RCON272944 ncbi Rickettsia conorii Malish 70
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3890
RBEL336407 ncbi Rickettsia bellii RML369-C0
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PRUM264731 ncbi Prevotella ruminicola 231
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PINT246198 Prevotella intermedia 171
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
OTSU357244 ncbi Orientia tsutsugamushi Boryong0
NSEN222891 ncbi Neorickettsia sennetsu Miyayama1
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE264732 ncbi Moorella thermoacetica ATCC 390731
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR368407 ncbi Methanoculleus marisnigri JR11
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-11
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro1
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MACE188937 ncbi Methanosarcina acetivorans C2A1
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53340
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LMON265669 ncbi Listeria monocytogenes 4b F23650
LMON169963 ncbi Listeria monocytogenes EGD-e0
LLAC272623 ncbi Lactococcus lactis lactis Il14030
LLAC272622 ncbi Lactococcus lactis cremoris SK110
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINN272626 ncbi Listeria innocua Clip112620
LHEL405566 ncbi Lactobacillus helveticus DPC 45710
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3340
LBRE387344 ncbi Lactobacillus brevis ATCC 3670
LACI272621 ncbi Lactobacillus acidophilus NCFM0
KRAD266940 ncbi Kineococcus radiotolerans SRS302160
JSP290400 ncbi Jannaschia sp. CCS11
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-11
HSOM228400 ncbi Haemophilus somnus 23361
HSOM205914 ncbi Haemophilus somnus 129PT1
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J990
HPYL357544 ncbi Helicobacter pylori HPAG10
HPY ncbi Helicobacter pylori 266950
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
FMAG334413 ncbi Finegoldia magna ATCC 293280
EFAE226185 ncbi Enterococcus faecalis V5830
DSP255470 ncbi Dehalococcoides sp. CBDB11
DSP216389 ncbi Dehalococcoides sp. BAV11
DRED349161 ncbi Desulfotomaculum reducens MI-11
DNOD246195 ncbi Dichelobacter nodosus VCS1703A0
DHAF138119 ncbi Desulfitobacterium hafniense Y511
DETH243164 ncbi Dehalococcoides ethenogenes 1950
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPHY357809 ncbi Clostridium phytofermentans ISDg0
CPER289380 ncbi Clostridium perfringens SM1010
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10620
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3820
CMIC31964 ncbi Clavibacter michiganensis sepedonicus0
CMET456442 ncbi Candidatus Methanoregula boonei 6A81
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF81
CJEJ407148 ncbi Campylobacter jejuni jejuni 811160
CJEJ360109 ncbi Campylobacter jejuni doylei 269.970
CJEJ354242 ncbi Campylobacter jejuni jejuni 81-1760
CJEJ195099 ncbi Campylobacter jejuni RM12210
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111680
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29011
CFET360106 ncbi Campylobacter fetus fetus 82-400
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CDIF272563 ncbi Clostridium difficile 6301
CCUR360105 ncbi Campylobacter curvus 525.920
CCON360104 ncbi Campylobacter concisus 138260
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN0
CBLO203907 ncbi Candidatus Blochmannia floridanus0
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80521
CABO218497 ncbi Chlamydophila abortus S26/31
BTUR314724 ncbi Borrelia turicatae 91E1350
BTRI382640 ncbi Bartonella tribocorum CIP 1054760
BQUI283165 ncbi Bartonella quintana Toulouse0
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH0
BHEN283166 ncbi Bartonella henselae Houston-10
BGAR290434 ncbi Borrelia garinii PBi0
BCLA66692 ncbi Bacillus clausii KSM-K161
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC360095 ncbi Bartonella bacilliformis KC5830
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1001
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)0
BAPH198804 ncbi Buchnera aphidicola Sg (Schizaphis graminum)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP232721 ncbi Acidovorax sp. JS421
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG10
ALAI441768 ncbi Acholeplasma laidlawii PG-8A0
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
ACAU438753 ncbi Azorhizobium caulinodans ORS 5711


Names of the homologs of the genes in the group in each of these orgs
  G6851   EG10512   EG10121   EG10120   EG10119   EG10118   
WPIP955
WPIP80849
VEIS391735
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TSP28240
TROS309801
TPET390874 TPET_0559
TPEN368408
TPAL243276
TMAR243274
TLET416591 TLET_2009
TFUS269800
SWOL335541
STOK273063
STHE322159
STHE299768
STHE264199
SSUI391296
SSUI391295
SSP321332
SSP321327 CYA_2658
SSOL273057
SSAP342451 SSP2205
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE488221
SPNE487214
SPNE487213
SPNE171101
SPNE170187
SPNE1313
SMUT210007
SMAR399550
SGOR29390
SAGA211110 GBS0511
SAGA208435 SAG_0464
SAGA205921 SAK_0566
SACI330779
RXYL266117
RTYP257363
RSPH349102 RSPH17025_1900
RSP357808 ROSERS_3984
RRIC452659
RRIC392021
RPRO272947
RMAS416276
RFER338969 RFER_2292
RFEL315456 RF_0527
RETL347834 RHE_CH02952
RCON272944
RCAS383372
RCAN293613
RBEL391896
RBEL336407
RAKA293614
PTOR263820
PRUM264731 GFRORF0463
PPEN278197
PISL384616
PINT246198 PIN_A0756
PFUR186497 PF0265
PAST100379
PARS340102
PAER178306
OTSU357244
NSEN222891 NSE_0612
MTHE349307
MTHE264732 MOTH_1176
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748 MMOB5780
MMAZ192952
MMAR426368 MMARC7_0820
MMAR368407 MEMAR_1232
MLAB410358
MKAN190192
MHYO295358
MHYO262722
MHYO262719
MHUN323259 MHUN_0834
MGEN243273
MFLO265311
MCAP340047
MBUR259564
MBAR269797 MBAR_A0124
MART243272
MACE188937 MA4347
LXYL281090
LWEL386043
LSAK314315 LSA0509
LREU557436
LPLA220668
LMON265669
LMON169963
LLAC272623
LLAC272622
LJOH257314
LINN272626
LHEL405566
LGAS324831
LDEL390333
LDEL321956
LCAS321967
LBRE387344
LACI272621
KRAD266940
JSP290400 JANN_3724
IHOS453591
HWAL362976
HSP64091 VNG2147G
HSOM228400 HSM_1485
HSOM205914 HS_1010
HSAL478009 OE3994F
HPYL85963
HPYL357544
HPY
HBUT415426
HACI382638
FMAG334413
EFAE226185
DSP255470 CBDBA890
DSP216389 DEHABAV1_0820
DRED349161 DRED_0430
DNOD246195
DHAF138119 DSY4360
DETH243164
CTRA471473
CTRA471472
CSUL444179
CPRO264201 PC0811
CPHY357809
CPER289380
CPEL335992
CMUR243161
CMIC443906
CMIC31964
CMET456442 MBOO_1663
CMAQ397948
CKOR374847 KCR_0632
CJEJ407148
CJEJ360109
CJEJ354242
CJEJ195099
CJEJ192222
CJEI306537 JK0682
CHYD246194 CHY_0889
CFET360106
CFEL264202 CF0298
CDIF272563 CD0297
CCUR360105
CCON360104
CCAV227941
CBLO291272
CBLO203907
CBEI290402 CBEI_1914
CABO218497 CAB685
BTUR314724
BTRI382640
BQUI283165
BLON206672
BHER314723
BHEN283166
BGAR290434
BCLA66692 ABC2970
BBUR224326
BBAC360095
BBAC264462 BD3625
BAPH372461
BAPH198804 BUSG280
BAFZ390236
AYEL322098
AURANTIMONAS
ASP232721 AJS_2045
APER272557
ANAE240017
ALAI441768
AFUL224325 AF_0512
ACAU438753 AZC_0361


Organism features enriched in list (features available for 187 out of the 198 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 7.918e-75092
Arrangment:Pairs 0.002198124112
Disease:Wide_range_of_infections 3.013e-61111
Endospores:No 4.365e-13107211
Endospores:Yes 0.0050989953
GC_Content_Range4:0-40 4.690e-15111213
GC_Content_Range4:40-60 0.000338354224
GC_Content_Range4:60-100 9.154e-822145
GC_Content_Range7:0-30 9.500e-62947
GC_Content_Range7:30-40 1.562e-882166
GC_Content_Range7:50-60 5.429e-714107
GC_Content_Range7:60-70 1.912e-818134
Genome_Size_Range5:0-2 2.133e-30108155
Genome_Size_Range5:4-6 1.055e-1717184
Genome_Size_Range5:6-10 1.253e-7147
Genome_Size_Range9:0-1 2.505e-112527
Genome_Size_Range9:1-2 2.343e-1883128
Genome_Size_Range9:3-4 0.00169501477
Genome_Size_Range9:4-5 6.736e-81096
Genome_Size_Range9:5-6 7.494e-9788
Genome_Size_Range9:6-8 4.490e-6138
Gram_Stain:Gram_Neg 4.861e-877333
Gram_Stain:Gram_Pos 0.000506264150
Habitat:Aquatic 0.00401831991
Habitat:Host-associated 0.000315984206
Habitat:Specialized 0.00306802653
Habitat:Terrestrial 0.0024496331
Motility:No 0.000334065151
Motility:Yes 1.842e-660267
Optimal_temp.:30-35 0.004950967
Oxygen_Req:Aerobic 0.000069640185
Oxygen_Req:Anaerobic 0.003160544102
Oxygen_Req:Microaerophilic 0.00718831118
Pathogenic_in:Animal 0.00761151366
Pathogenic_in:Swine 0.003272855
Shape:Coccus 0.00001914382
Shape:Rod 1.253e-1076347
Shape:Sphere 2.630e-61619
Shape:Spiral 0.00184031934
Temp._range:Hyperthermophilic 0.00002821723
Temp._range:Mesophilic 0.0015881139473
Temp._range:Thermophilic 0.00702111835



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 4
Effective number of orgs (counting one per cluster within 468 clusters): 4

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
HMUK485914 ncbi Halomicrobium mukohataei DSM 12286 0.00111025576
PGIN242619 ncbi Porphyromonas gingivalis W83 0.00191996106
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA 0.00575657326
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica) 0.00693507556


Names of the homologs of the genes in the group in each of these orgs
  G6851   EG10512   EG10121   EG10120   EG10119   EG10118   
HMUK485914 HMUK_2293HMUK_2294HMUK_2294HMUK_2293HMUK_1274HMUK_2296
PGIN242619 PG_2053PG_0481PG_1780PG_2053PG_1619PG_2081
CVES412965 COSY_0007COSY_0760COSY_0760COSY_0007COSY_0243COSY_0459
CRUT413404 RMAG_0007RMAG_0835RMAG_0835RMAG_0007RMAG_0257RMAG_0499


Organism features enriched in list (features available for 4 out of the 4 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951530.5811
PWY-5918 (heme biosynthesis I)2721850.5672
GLYCOCAT-PWY (glycogen degradation I)2461730.5592
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181590.5476
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861860.5367
AST-PWY (arginine degradation II (AST pathway))1201070.5288
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652130.5284
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491210.5146
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001870.5076
PWY-1269 (CMP-KDO biosynthesis I)3251960.5062
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251550.4981
PWY-5340 (sulfate activation for sulfonation)3852140.4920
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761310.4878
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911800.4838
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961810.4777
PWY-4041 (γ-glutamyl cycle)2791740.4749
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901780.4730
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481990.4724
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222220.4711
PWY-5386 (methylglyoxal degradation I)3051830.4684
TYRFUMCAT-PWY (tyrosine degradation I)1841320.4671
PWY-561 (superpathway of glyoxylate cycle)1621210.4640
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162190.4620
PWY-5148 (acyl-CoA hydrolysis)2271500.4575
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111830.4536
GLYOXYLATE-BYPASS (glyoxylate cycle)1691230.4534
GLUTATHIONESYN-PWY (glutathione biosynthesis)3391930.4531
GLUTAMINDEG-PWY (glutamine degradation I)1911330.4508
PWY-5913 (TCA cycle variation IV)3011780.4451
GLUCARDEG-PWY (D-glucarate degradation I)1521130.4405
PWY-5194 (siroheme biosynthesis)3121810.4378
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491560.4351
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491560.4351
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001760.4343
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831270.4341
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911300.4291
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561130.4254
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3291850.4233
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891700.4222
GLUCONSUPER-PWY (D-gluconate degradation)2291450.4171
PWY-6196 (serine racemization)102840.4166
PWY-5188 (tetrapyrrole biosynthesis I)4392190.4151
PWY0-981 (taurine degradation IV)106860.4149
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911280.4147
GALACTARDEG-PWY (D-galactarate degradation I)1511090.4134
VALDEG-PWY (valine degradation I)2901690.4130
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982060.4090
PWY-6087 (4-chlorocatechol degradation)2231410.4071
GLUTDEG-PWY (glutamate degradation II)1941280.4050
PWY-5084 (2-ketoglutarate dehydrogenase complex)3261810.4039
PWY0-501 (lipoate biosynthesis and incorporation I)3852010.4030
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96790.4013
PWY-6134 (tyrosine biosynthesis IV)89750.4006
ASPARAGINE-BIOSYNTHESIS (asparagine biosynthesis I)3561910.4004



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10512   EG10121   EG10120   EG10119   EG10118   
G68510.9988210.9998470.9999890.9995910.99978
EG105120.9997020.9988960.9989910.998768
EG101210.9998980.9997570.999841
EG101200.9997040.999838
EG101190.999602
EG10118



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PAIRWISE BLAST SCORES:

  G6851   EG10512   EG10121   EG10120   EG10119   EG10118   
G68510.0f0--1.7e-53--
EG10512-0.0f0----
EG10121-5.0e-400.0f0---
EG101201.3e-50--0.0f0--
EG10119----0.0f0-
EG10118-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- BIOTIN-BIOSYNTHESIS-PWY (biotin biosynthesis I) (degree of match pw to cand: 0.333, degree of match cand to pw: 0.667, average score: 0.729)
  Genes in pathway or complex:
   *in cand* 0.9998 0.9997 EG10121 (bioF) 7KAPSYN-MONOMER (8-amino-7-oxononanoate synthase monomer)
             0.6724 0.1756 EG10277 (fabH) FABH-MONOMER (FabH)
   *in cand* 0.9996 0.9990 EG10119 (bioC) EG10119-MONOMER (BioC methyltransferase)
             0.6745 0.0698 EG11318 (fabG) 3-OXOACYL-ACP-REDUCT-MONOMER (3-oxo-acyl-[acyl-carrier-protein] reductase)
             0.4932 0.2719 EG11284 (fabZ) FABZ-MONOMER (FabZ)
             0.2078 0.0948 EG11528 (fabI) ENOYL-ACP-REDUCT-NADH-MONOMER (enoyl-[acyl-carrier-protein] reductase)
             0.5586 0.3645 EG10274 (fabB) FABB-MONOMER (FabB)
             0.9988 0.9984 EG10122 (bioH) EG10122-MONOMER (carboxylesterase)
             0.9988 0.9942 EG10117 (bioA) DAPASYN-MONOMER (adenosylmethionine-8-amino-7-oxononanoate aminotransferase monomer)
   *in cand* 0.9996 0.9988 EG10118 (bioB) BIOTIN-SYN-MONOMER (biotin synthase monomer)
   *in cand* 0.9997 0.9989 EG10120 (bioD) DETHIOBIOTIN-SYN-MONOMER (dethiobiotin synthetase monomer)
             0.6790 0.1252 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9992 0.9988 EG10512 (kbl) AKBLIG-MONOMER (Kbl)
   *in cand* 0.9997 0.9988 G6851 (ynfK) G6851-MONOMER (predicted dethiobiotin synthetase)

- PWY0-1507 (biotin biosynthesis from 7-keto-8-aminopelargonate) (degree of match pw to cand: 0.667, degree of match cand to pw: 0.333, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9989 EG10120 (bioD) DETHIOBIOTIN-SYN-MONOMER (dethiobiotin synthetase monomer)
   *in cand* 0.9996 0.9988 EG10118 (bioB) BIOTIN-SYN-MONOMER (biotin synthase monomer)
             0.9988 0.9942 EG10117 (bioA) DAPASYN-MONOMER (adenosylmethionine-8-amino-7-oxononanoate aminotransferase monomer)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9990 EG10119 (bioC) EG10119-MONOMER (BioC methyltransferase)
   *in cand* 0.9998 0.9997 EG10121 (bioF) 7KAPSYN-MONOMER (8-amino-7-oxononanoate synthase monomer)
   *in cand* 0.9992 0.9988 EG10512 (kbl) AKBLIG-MONOMER (Kbl)
   *in cand* 0.9997 0.9988 G6851 (ynfK) G6851-MONOMER (predicted dethiobiotin synthetase)

- PWY-6519 (7-keto-8-aminopelargonate biosynthesis I) (degree of match pw to cand: 0.222, degree of match cand to pw: 0.333, average score: 0.695)
  Genes in pathway or complex:
             0.9988 0.9984 EG10122 (bioH) EG10122-MONOMER (carboxylesterase)
             0.5586 0.3645 EG10274 (fabB) FABB-MONOMER (FabB)
             0.2078 0.0948 EG11528 (fabI) ENOYL-ACP-REDUCT-NADH-MONOMER (enoyl-[acyl-carrier-protein] reductase)
             0.4932 0.2719 EG11284 (fabZ) FABZ-MONOMER (FabZ)
             0.6745 0.0698 EG11318 (fabG) 3-OXOACYL-ACP-REDUCT-MONOMER (3-oxo-acyl-[acyl-carrier-protein] reductase)
   *in cand* 0.9996 0.9990 EG10119 (bioC) EG10119-MONOMER (BioC methyltransferase)
             0.6724 0.1756 EG10277 (fabH) FABH-MONOMER (FabH)
   *in cand* 0.9998 0.9997 EG10121 (bioF) 7KAPSYN-MONOMER (8-amino-7-oxononanoate synthase monomer)
             0.6790 0.1252 EG50003 (acpP) TRANS-DELTA3-CIS-DELTA5-DODECENOYL-ACP (trans-Δ3-cis-Δ5-dodecenoyl-ACP)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9996 0.9988 EG10118 (bioB) BIOTIN-SYN-MONOMER (biotin synthase monomer)
   *in cand* 0.9997 0.9989 EG10120 (bioD) DETHIOBIOTIN-SYN-MONOMER (dethiobiotin synthetase monomer)
   *in cand* 0.9992 0.9988 EG10512 (kbl) AKBLIG-MONOMER (Kbl)
   *in cand* 0.9997 0.9988 G6851 (ynfK) G6851-MONOMER (predicted dethiobiotin synthetase)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10118 EG10119 EG10120 EG10121 (centered at EG10119)
EG10512 (centered at EG10512)
G6851 (centered at G6851)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6851   EG10512   EG10121   EG10120   EG10119   EG10118   
335/623311/623305/623360/623275/623405/623
AAEO224324:0:Tyes045-0-286
AAUR290340:2:Tyes036910-4
AAVE397945:0:Tyes16021603160316020306
ABAC204669:0:Tyes-27482748-0-
ABAU360910:0:Tyes163416321632-16340
ABOR393595:0:Tyes033014
ABUT367737:0:Tyes---0404314
ACAU438753:0:Tyes-----0
ACEL351607:0:Tyes---17-0
ACRY349163:8:Tyes0110-2
ADEH290397:0:Tyes020403412036983413
AEHR187272:0:Tyes021282128021262129
AFER243159:0:Tyes13161613140
AFUL224325:0:Tyes----0-
AHYD196024:0:Tyes326311320
AMAR234826:0:Tyes113--1132390
AMAR329726:9:Tyes18800-1880-995
AMET293826:0:Tyes-378378--0
AORE350688:0:Tyes-00---
APHA212042:0:Tyes949--949-0
APLE416269:0:Tyes498-8284988260
APLE434271:0:Tno465-8044658020
ASAL382245:5:Tyes268402686268426852687
ASP1667:3:Tyes-437--10850
ASP232721:2:Tyes-----0
ASP62928:0:Tyes30032937
ASP62977:0:Tyes0--0-1125
ASP76114:2:Tyes291829212921291829190
AVAR240292:3:Tyes0-8240-2395
BABO262698:0:Tno2-12-0
BABO262698:1:Tno-222--0-
BAMB339670:2:Tno-0--152-
BAMB339670:3:Tno1-01-2
BAMB398577:2:Tno-0--1757-
BAMB398577:3:Tno1-01-2
BAMY326423:0:Tyes1420143142-141
BANT260799:0:Tno343603435343634333432
BANT261594:2:Tno341103410341134083407
BANT568206:2:Tyes3870386387384383
BANT592021:2:Tno359803597359835953594
BAPH198804:0:Tyes-----0
BBAC264462:0:Tyes----0-
BBRO257310:0:Tyes2018-2016201820180
BCAN483179:0:Tno0-10-2
BCAN483179:1:Tno-204--0-
BCEN331271:1:Tno-1123--0-
BCEN331271:2:Tno1-01-2
BCEN331272:2:Tyes-1357--0-
BCEN331272:3:Tyes1-01-2
BCER226900:1:Tyes342403423342434213420
BCER288681:0:Tno334203341334233393338
BCER315749:1:Tyes216702166216721642163
BCER405917:1:Tyes330503304330533023301
BCER572264:1:Tno351003509351035073506
BCIC186490:0:Tyes3-1320
BCLA66692:0:Tyes----0-
BFRA272559:1:Tyes0124920-3
BFRA295405:0:Tno0141220-3
BHAL272558:0:Tyes03162316203164988
BJAP224911:0:Fyes205811502057205802055
BLIC279010:0:Tyes51316365125130514
BMAL243160:0:Tno-0----
BMAL243160:1:Tno1-0118342
BMAL320388:0:Tno-0----
BMAL320388:1:Tno2276-2277227602275
BMAL320389:0:Tyes-0----
BMAL320389:1:Tyes235-2362350234
BMEL224914:0:Tno2-12-0
BMEL224914:1:Tno-0--234-
BMEL359391:0:Tno2-12-0
BMEL359391:1:Tno-210--0-
BOVI236:0:Tyes0-10-2
BOVI236:1:Tyes-196--0-
BPAR257311:0:Tno618-6206186180
BPER257313:0:Tyes0-200525
BPET94624:0:Tyes01104883701
BPSE272560:0:Tyes-0----
BPSE272560:1:Tyes1-2122910
BPSE320372:0:Tno-0----
BPSE320372:1:Tno1-2126450
BPSE320373:0:Tno-0----
BPSE320373:1:Tno1-2125410
BPUM315750:0:Tyes-00--1178
BSP107806:2:Tyes0--0-1
BSP36773:1:Tyes-2453--0-
BSP36773:2:Tyes1-01-2
BSP376:0:Tyes-4573--0523
BSUB:0:Tyes1370013711370-1369
BSUI204722:0:Tyes0-10-2
BSUI204722:1:Tyes-196--0-
BSUI470137:0:Tno0-10-2
BSUI470137:1:Tno-221--0-
BTHA271848:0:Tno-0----
BTHA271848:1:Tno1-2120060
BTHE226186:0:Tyes7707477-73
BTHU281309:1:Tno330203301330232993298
BTHU412694:1:Tno303703036303730343033
BVIE269482:6:Tyes-0----
BVIE269482:7:Tyes79-7879080
BWEI315730:4:Tyes334203341334233393338
BXEN266265:1:Tyes-00---
CABO218497:0:Tyes-----0
CACE272562:1:Tyes1164--1164-0
CAULO:0:Tyes4230424423-2392
CBEI290402:0:Tyes-----0
CBOT36826:1:Tno0--0-1
CBOT441770:0:Tyes0--0-1
CBOT441771:0:Tno0--0-1
CBOT441772:1:Tno0--0-1
CBOT498213:1:Tno0--0-1
CBOT508765:1:Tyes---1-0
CBOT515621:2:Tyes0--0-1
CBOT536232:0:Tno0----1
CBUR227377:1:Tyes8540857854343858
CBUR360115:1:Tno-0689-351688
CBUR434922:2:Tno4914145500
CCHL340177:0:Tyes314803--
CDES477974:0:Tyes10011345
CDIF272563:1:Tyes-----0
CDIP257309:0:Tyes1075-12631075-0
CEFF196164:0:Fyes1357--1357-0
CFEL264202:1:Tyes-----0
CGLU196627:0:Tyes2531--2531-0
CHOM360107:1:Tyes---0-11
CHUT269798:0:Tyes498--498-0
CHYD246194:0:Tyes-----0
CJAP155077:0:Tyes311320
CJEI306537:0:Tyes-----0
CKLU431943:1:Tyes0--0-750
CKOR374847:0:Tyes-0----
CMET456442:0:Tyes----0-
CNOV386415:0:Tyes0--0-2
CPER195102:1:Tyes0--0-1
CPER195103:0:Tno0--0-1
CPNE115711:1:Tyes--1--0
CPNE115713:0:Tno--0--1
CPNE138677:0:Tno--0--1
CPNE182082:0:Tno--0--1
CPRO264201:0:Fyes-0----
CPSY167879:0:Tyes242602424242624252423
CRUT413404:0:Tyes07737730237463
CSAL290398:0:Tyes033014
CSP501479:7:Fyes----0-
CSP501479:8:Fyes-82---0
CSP78:0:Tyes-0----
CSP78:2:Tyes905-90490502676
CTEP194439:0:Tyes018773014
CTET212717:0:Tyes1575--1575-0
CVES412965:0:Tyes07217210227432
CVIO243365:0:Tyes010923894038903895
DARO159087:0:Tyes230022972297230022990
DDES207559:0:Tyes--78-0
DGEO319795:1:Tyes-00---
DHAF138119:0:Tyes----0-
DOLE96561:0:Tyes1-01-2
DPSY177439:2:Tyes0-30-5
DRAD243230:3:Tyes-1896--0-
DRED349161:0:Tyes-----0
DSHI398580:5:Tyes-00-2209-
DSP216389:0:Tyes0-----
DSP255470:0:Tno0-----
DVUL882:1:Tyes---7-0
ECAN269484:0:Tyes890--8900656
ECAR218491:0:Tyes211202680267826792681
ECHA205920:0:Tyes---10260304
ECOL199310:0:Tno109435211320
ECOL316407:0:Tno83228851320
ECOL331111:6:Tno92631641320
ECOL362663:0:Tno74329241320
ECOL364106:1:Tno100633791320
ECOL405955:2:Tyes83629941320
ECOL409438:6:Tyes89131201320
ECOL413997:0:Tno80727431320
ECOL439855:4:Tno78830681320
ECOL469008:0:Tno195402729272727282730
ECOL481805:0:Tno195402778277627772779
ECOL585034:0:Tno82229361320
ECOL585035:0:Tno80531271320
ECOL585055:0:Tno93832221320
ECOL585056:2:Tno96032111320
ECOL585057:0:Tno72433811320
ECOL585397:0:Tno97734591320
ECOL83334:0:Tno147137201320
ECOLI:0:Tno84729081320
ECOO157:0:Tno151937521320
EFER585054:1:Tyes02440880877878881
ELIT314225:0:Tyes-0--107727
ERUM254945:0:Tyes225----0
ERUM302409:0:Tno224----0
ESP42895:1:Tyes182701173117511741172
FALN326424:0:Tyes946--9460947
FJOH376686:0:Tyes1120-112-102
FNOD381764:0:Tyes-00---
FNUC190304:0:Tyes1--1-0
FPHI484022:1:Tyes16410-1641-1638
FRANT:0:Tno2080-208-211
FSP106370:0:Tyes0--0-429
FSP1855:0:Tyes1-21-0
FSUC59374:0:Tyes-1-0-817
FTUL351581:0:Tno3225-3-0
FTUL393011:0:Tno3179-3-0
FTUL393115:0:Tyes2060-206-209
FTUL401614:0:Tyes1840-184-187
FTUL418136:0:Tno0551-0-3
FTUL458234:0:Tno3198-3-0
GBET391165:0:Tyes0-20973
GFOR411154:0:Tyes1870---191
GKAU235909:1:Tyes14835715711483120
GMET269799:1:Tyes741007412742
GOXY290633:5:Tyes39070321302
GSUL243231:0:Tyes010431043010411
GTHE420246:1:Tyes----110
GURA351605:0:Tyes199399319910
GVIO251221:0:Tyes-00315211023977
HARS204773:0:Tyes014721472014741
HAUR316274:2:Tyes-00-1199-
HCHE349521:0:Tyes359103594359135923595
HDUC233412:0:Tyes402-5744025720
HHAL349124:0:Tyes033014
HHEP235279:0:Tyes0--0--
HINF281310:0:Tyes433-342433-0
HINF374930:0:Tyes0-870-357
HINF71421:0:Tno413--413-0
HMAR272569:8:Tyes-00-2034-
HMOD498761:0:Tyes0--0-1276
HMUK485914:1:Tyes103110321032103101034
HNEP81032:0:Tyes1186--1186-0
HSAL478009:4:Tyes----0-
HSOM205914:1:Tyes-----0
HSOM228400:0:Tno-----0
HSP64091:2:Tno----0-
ILOI283942:0:Tyes108101083108110821084
JSP290400:1:Tyes----0-
JSP375286:0:Tyes100130782
KPNE272620:2:Tyes027114551455345524550
LBIF355278:2:Tyes---0-2
LBIF456481:2:Tno---0-2
LBOR355276:1:Tyes---0-2
LBOR355277:1:Tno---2-0
LCHO395495:0:Tyes1001-2
LINT189518:1:Tyes1-01-3
LINT267671:1:Tno2-32-0
LINT363253:3:Tyes4-1430
LMES203120:1:Tyes0--0--
LPNE272624:0:Tno77307717731628770
LPNE297245:1:Fno80708098071512810
LPNE297246:1:Fyes66706656671522664
LPNE400673:0:Tno31670138890
LSAK314315:0:Tyes-0----
LSPH444177:1:Tyes24350024358312433
MABS561007:1:Tyes2-3-13400
MACE188937:0:Tyes----0-
MAEO419665:0:Tyes0-5300--
MAER449447:0:Tyes50934048-5093-0
MAQU351348:2:Tyes022013
MAVI243243:0:Tyes2322--232202314
MBAR269797:1:Tyes----0-
MBOV233413:0:Tno15780--591597
MBOV410289:0:Tno15690--601573
MCAP243233:0:Tyes411430
MEXT419610:0:Tyes1491-0149139083158
MFLA265072:0:Tyes033014
MGIL350054:3:Tyes3-4310700
MHUN323259:0:Tyes----0-
MJAN243232:2:Tyes1-01--
MLEP272631:0:Tyes0--0-1
MLOT266835:1:Tyes-870---
MLOT266835:2:Tyes1519--166901521
MMAG342108:0:Tyes107901076-10781074
MMAR267377:0:Tyes0-10--
MMAR368407:0:Tyes----0-
MMAR394221:0:Tyes-153612841283-0
MMAR402880:1:Tyes1-01--
MMAR426368:0:Tyes---0--
MMAR444158:0:Tyes--01--
MMOB267748:0:Tyes-0----
MPET420662:1:Tyes0110-1254
MSME246196:0:Tyes0--0954
MSP164756:1:Tno3--310370
MSP164757:0:Tno3--312480
MSP189918:2:Tyes3--310560
MSP266779:3:Tyes-00-1664-
MSP400668:0:Tyes03573014
MSP409:2:Tyes--01105243
MSUC221988:0:Tyes561--56101089
MTBCDC:0:Tno16470--601651
MTBRV:0:Tno15530--571572
MTHE264732:0:Tyes----0-
MTUB336982:0:Tno15710--591575
MTUB419947:0:Tyes15930--591611
MVAN350058:0:Tyes0--018203
MXAN246197:0:Tyes22393129450
NARO279238:0:Tyes0243610-2
NEUR228410:0:Tyes033014
NEUT335283:2:Tyes033014
NFAR247156:2:Tyes1735-1734173501750
NGON242231:0:Tyes0--0-469
NHAM323097:2:Tyes2450-24512450-0
NMEN122586:0:Tno0--0-433
NMEN122587:0:Tyes0-10240-387
NMEN272831:0:Tno0-8460-351
NMEN374833:0:Tno0--0-369
NMUL323848:3:Tyes411430
NOCE323261:1:Tyes033014
NPHA348780:2:Tyes16471648-164701650
NSEN222891:0:Tyes-----0
NSP103690:6:Tyes--04335-1555
NSP35761:1:Tyes-1718-137201375
NSP387092:0:Tyes---0-1293
NWIN323098:0:Tyes---2201-0
OANT439375:4:Tyes0-10-2
OANT439375:5:Tyes----0-
OCAR504832:0:Tyes20513020502051031
OIHE221109:0:Tyes-1814--0-
PABY272844:0:Tyes-00---
PACN267747:0:Tyes5780---1029
PAER208963:0:Tyes411430
PAER208964:0:Tno411430
PARC259536:0:Tyes0--0-1543
PATL342610:0:Tyes251002512251025112513
PCAR338963:0:Tyes02112110209-
PCRY335284:1:Tyes0-20850-1781
PDIS435591:0:Tyes67401705674673669
PENT384676:0:Tyes033014
PFLU205922:0:Tyes033014
PFLU216595:1:Tyes033014
PFLU220664:0:Tyes033014
PFUR186497:0:Tyes-0----
PGIN242619:0:Tyes13680113013689921396
PHAL326442:1:Tyes07302013
PHOR70601:0:Tyes-00---
PING357804:0:Tyes64066646567
PINT246198:1:Tyes-0----
PLUM243265:0:Fyes75234091320
PLUT319225:0:Tyes1763017661763--
PMAR146891:0:Tyes473--4734720
PMAR167539:0:Tyes532-529532-0
PMAR167540:0:Tyes---388-0
PMAR167542:0:Tyes---477-0
PMAR167546:0:Tyes463--4634620
PMAR167555:0:Tyes392-389392-0
PMAR59920:0:Tno355-352355-0
PMAR74546:0:Tyes473--473-0
PMAR74547:0:Tyes440-437440-0
PMAR93060:0:Tyes518--5185170
PMEN399739:0:Tyes033014
PMOB403833:0:Tyes-00---
PMUL272843:1:Tyes262-1522262-0
PNAP365044:8:Tyes1221-0
PPRO298386:2:Tyes5920594592593595
PPUT160488:0:Tno411430
PPUT351746:0:Tyes411430
PPUT76869:0:Tno411430
PRUM264731:0:Tyes-0----
PSP117:0:Tyes1489-01489-4012
PSP296591:2:Tyes0344267203005673
PSP312153:0:Tyes0110-3
PSP56811:2:Tyes0-12490-1050
PSTU379731:0:Tyes033014
PSYR205918:0:Tyes033014
PSYR223283:2:Tyes411430
PTHE370438:0:Tyes1018----0
RALB246199:0:Tyes2--21690
RDEN375451:4:Tyes-660---
RETL347834:5:Tyes-0----
REUT264198:2:Tyes-0----
REUT264198:3:Tyes1-011652
REUT381666:1:Tyes-0----
REUT381666:2:Tyes1-011582
RFEL315456:2:Tyes-----0
RFER338969:1:Tyes-----0
RLEG216596:6:Tyes-0--1-
RMET266264:1:Tyes-0----
RMET266264:2:Tyes1-011442
RPAL258594:0:Tyes-00142761493
RPAL316055:0:Tyes2022002022-839
RPAL316056:0:Tyes772007728101914
RPAL316057:0:Tyes-163416342148-0
RPAL316058:0:Tyes10116406401011-0
RPOM246200:1:Tyes-3141--03119
RRUB269796:1:Tyes-407--0-
RSAL288705:0:Tyes5742-5-0
RSOL267608:0:Tyes-0----
RSOL267608:1:Tyes1241-12401241940
RSP101510:3:Fyes10-111056650
RSP357808:0:Tyes----0-
RSPH272943:4:Tyes-469469--0
RSPH349101:2:Tno-463463--0
RSPH349102:5:Tyes-0----
SACI56780:0:Tyes-00--2002
SAGA205921:0:Tno-----0
SAGA208435:0:Tno-----0
SAGA211110:0:Tyes-----0
SALA317655:1:Tyes257970256--0
SARE391037:0:Tyes2--2-0
SAUR158878:1:Tno-0-1932-1930
SAUR158879:1:Tno-0-1835-1833
SAUR196620:0:Tno-0-1903-1901
SAUR273036:0:Tno-0-1813-1811
SAUR282458:0:Tno-0-1939-1937
SAUR282459:0:Tno-0-1867-1865
SAUR359786:1:Tno-0-1911-1909
SAUR359787:1:Tno-0-1880-1878
SAUR367830:3:Tno-0-1769-1767
SAUR418127:0:Tyes-0-1922-1920
SAUR426430:0:Tno-0-1869-1867
SAUR93061:0:Fno-0-2124-2122
SAUR93062:1:Tno-0-1787-1785
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