CANDIDATE ID: 491

CANDIDATE ID: 491

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9935040e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- EG11059 (usg) (b2319)
   Products of gene:
     - EG11059-MONOMER (predicted semialdehyde dehydrogenase)

- EG10454 (truA) (b2318)
   Products of gene:
     - EG10454-MONOMER (tRNA pseudouridine synthase I)
     - CPLX0-7728 (tRNA pseudouridine synthase I)
       Reactions:
        tRNA uridine  ->  tRNA pseudouridine

- EG10327 (folC) (b2315)
   Products of gene:
     - FOLC-MONOMER (bifunctional folypolyglutamate synthetase / dihydrofolate synthetase)
       Reactions:
        L-glutamate + ATP + methylene-tetrahydropteroyl-[gamma-Glu](n)  ->  phosphate + ADP + methylene-tetrahydropteroyl-[gamma-Glu](n+1)
         In pathways
         PWY-2161 (folate polyglutamylation I)
        L-glutamate + ATP + 10-formyl-tetrahydropteroyl-[gamma-Glu](n)  ->  ADP + phosphate + 10-formyl-tetrahydropteroyl-[gamma-Glu](n+1)
         In pathways
         PWY-2161 (folate polyglutamylation I)
        L-glutamate + ATP + tetrahydropteroyl-[gamma-Glu](n)  ->  phosphate + ADP + tetrahydropteroyl-[gamma-Glu](n+1)
         In pathways
         PWY-2161 (folate polyglutamylation I)
        L-glutamate + ATP + 7,8-dihydropteroate  ->  phosphate + ADP + 7,8-dihydrofolate + H+
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         PWY-3841 (PWY-3841)
         FOLSYN-PWY (tetrahydrofolate biosynthesis)
         1CMET2-PWY (formylTHF biosynthesis I)
         PWY-6548 (PWY-6548)

- EG10217 (accD) (b2316)
   Products of gene:
     - CARBOXYL-TRANSFERASE-BETA-MONOMER (acetyl-CoA carboxyltransferase, β subunit)
     - ACETYL-COA-CARBOXYLTRANSFER-CPLX (acetyl-CoA carboxyltransferase)
       Reactions:
        acetyl-CoA + a carboxylated-biotinylated-BCCP  =  malonyl-CoA + a biotinylated BCCP (dimer)
         In pathways
         PWY0-1264 (biotin-carboxyl carrier protein assembly)
       Regulatees:
        TU00232 (accD)
        TU00230 (accA)
     - ACETYL-COA-CARBOXYLMULTI-CPLX (acetyl-CoA carboxylase)
       Reactions:
        ATP + acetyl-CoA + bicarbonate  ->  malonyl-CoA + phosphate + ADP + 2 H+
         In pathways
         PWY0-881 (superpathway of fatty acid biosynthesis I (E. coli))
         FASYN-INITIAL-PWY (superpathway of fatty acid biosynthesis initiation (E. coli))
         PWY-5156 (PWY-5156)
         PWY-6113 (PWY-6113)
         PWY-6285 (PWY-6285)
         PWY-5744 (PWY-5744)
         PWY-5743 (PWY-5743)
         PWY-5789 (PWY-5789)
         PWY-4381 (fatty acid biosynthesis initiation I)

- EG10169 (cvpA) (b2313)
   Products of gene:
     - EG10169-MONOMER (membrane protein required for colicin V production)

- EG10088 (asd) (b3433)
   Products of gene:
     - ASP-SEMIALDEHYDE-DEHYDROGENASE-MONOMER (Asd)
     - ASP-SEMIALDEHYDE-DEHYDROGENASE-CPLX (aspartate semialdehyde dehydrogenase)
       Reactions:
        NADP+ + phosphate + L-aspartate-semialdehyde  =  NADPH + L-aspartyl-4-phosphate + H+
         In pathways
         MET-SAM-PWY (superpathway of S-adenosyl-L-methionine biosynthesis)
         METSYN-PWY (homoserine and methionine biosynthesis)
         PWY-5345 (PWY-5345)
         PWY-5347 (PWY-5347)
         THRESYN-PWY (threonine biosynthesis)
         PWY-724 (PWY-724)
         PWY-3001 (PWY-3001)
         P4-PWY (superpathway of lysine, threonine and methionine biosynthesis I)
         PWY0-781 (aspartate superpathway)
         PWY-6565 (PWY-6565)
         P101-PWY (P101-PWY)
         HOMOSERSYN-PWY (homoserine biosynthesis)
         DAPLYSINESYN-PWY (lysine biosynthesis I)
         PWY-2941 (PWY-2941)
         PWY-5097 (PWY-5097)
         PWY-2942 (PWY-2942)
         PWY-6559 (PWY-6559)
         PWY-6562 (PWY-6562)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 256
Effective number of orgs (counting one per cluster within 468 clusters): 185

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
ZMOB264203 ncbi Zymomonas mobilis mobilis ZM46
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola6
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A6
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110186
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103316
XFAS405440 ncbi Xylella fastidiosa M126
XFAS183190 ncbi Xylella fastidiosa Temecula16
XFAS160492 ncbi Xylella fastidiosa 9a5c6
XCAM487884 Xanthomonas campestris pv. paulliniae6
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-106
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80046
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339136
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3066
XAUT78245 ncbi Xanthobacter autotrophicus Py26
WPIP955 Wolbachia pipientis5
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1146
VEIS391735 ncbi Verminephrobacter eiseniae EF01-25
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TTUR377629 ncbi Teredinibacter turnerae T79015
TERY203124 ncbi Trichodesmium erythraeum IMS1015
TELO197221 ncbi Thermosynechococcus elongatus BP-15
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
TCRU317025 ncbi Thiomicrospira crunogena XCL-25
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
SSP644076 Silicibacter sp. TrichCH4B6
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)5
SSP292414 ncbi Ruegeria sp. TM10406
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB35
SPRO399741 ncbi Serratia proteamaculans 5686
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SMEL266834 ncbi Sinorhizobium meliloti 10216
SMED366394 ncbi Sinorhizobium medicae WSM4196
SLOI323850 ncbi Shewanella loihica PV-45
SLAC55218 Ruegeria lacuscaerulensis6
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SELO269084 ncbi Synechococcus elongatus PCC 63015
SDYS300267 ncbi Shigella dysenteriae Sd1976
SDEG203122 ncbi Saccharophagus degradans 2-405
SBOY300268 ncbi Shigella boydii Sb2276
SALA317655 ncbi Sphingopyxis alaskensis RB22566
RSPH349102 ncbi Rhodobacter sphaeroides ATCC 170256
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170296
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.16
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111706
RPOM246200 ncbi Ruegeria pomeroyi DSS-36
RPAL316058 ncbi Rhodopseudomonas palustris HaA26
RPAL316057 ncbi Rhodopseudomonas palustris BisB56
RPAL316056 ncbi Rhodopseudomonas palustris BisB186
RPAL316055 ncbi Rhodopseudomonas palustris BisA536
RPAL258594 ncbi Rhodopseudomonas palustris CGA0096
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38416
RFER338969 ncbi Rhodoferax ferrireducens T1185
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
RETL347834 ncbi Rhizobium etli CFN 426
RDEN375451 ncbi Roseobacter denitrificans OCh 1146
PTHE370438 ncbi Pelotomaculum thermopropionicum SI5
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30006
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a6
PSTU379731 ncbi Pseudomonas stutzeri A15016
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PSP296591 ncbi Polaromonas sp. JS6665
PPUT76869 ncbi Pseudomonas putida GB-16
PPUT351746 ncbi Pseudomonas putida F16
PPUT160488 ncbi Pseudomonas putida KT24406
PPRO298386 ncbi Photobacterium profundum SS96
PNAP365044 ncbi Polaromonas naphthalenivorans CJ25
PMUL272843 ncbi Pasteurella multocida multocida Pm706
PMEN399739 ncbi Pseudomonas mendocina ymp6
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-56
PFLU216595 ncbi Pseudomonas fluorescens SBW256
PFLU205922 ncbi Pseudomonas fluorescens Pf0-16
PENT384676 ncbi Pseudomonas entomophila L486
PCAR338963 ncbi Pelobacter carbinolicus DSM 23806
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PARC259536 ncbi Psychrobacter arcticus 273-45
PAER208964 ncbi Pseudomonas aeruginosa PAO16
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA146
OCAR504832 ncbi Oligotropha carboxidovorans OM56
OANT439375 ncbi Ochrobactrum anthropi ATCC 491886
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2556
NSP103690 ncbi Nostoc sp. PCC 71205
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534425
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NHAM323097 ncbi Nitrobacter hamburgensis X146
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124445
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E6
MSP409 Methylobacterium sp.6
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC15
MPET420662 ncbi Methylibium petroleiphilum PM15
MMAR394221 ncbi Maricaulis maris MCS106
MMAG342108 ncbi Magnetospirillum magneticum AMB-16
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA16
MCAP243233 ncbi Methylococcus capsulatus Bath5
MAQU351348 ncbi Marinobacter aquaeolei VT85
MAER449447 ncbi Microcystis aeruginosa NIES-8435
LPNE400673 ncbi Legionella pneumophila Corby6
LPNE297246 ncbi Legionella pneumophila Paris6
LPNE297245 ncbi Legionella pneumophila Lens6
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 16
LMON169963 ncbi Listeria monocytogenes EGD-e5
LCHO395495 ncbi Leptothrix cholodnii SP-65
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille5
JSP290400 ncbi Jannaschia sp. CCS16
ILOI283942 ncbi Idiomarina loihiensis L2TR6
HSOM228400 ncbi Haemophilus somnus 23366
HSOM205914 ncbi Haemophilus somnus 129PT6
HNEP81032 Hyphomonas neptunium5
HINF71421 ncbi Haemophilus influenzae Rd KW206
HINF281310 ncbi Haemophilus influenzae 86-028NP6
HHAL349124 ncbi Halorhodospira halophila SL16
HDUC233412 ncbi Haemophilus ducreyi 35000HP6
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HARS204773 ncbi Herminiimonas arsenicoxydans5
GURA351605 ncbi Geobacter uraniireducens Rf46
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GOXY290633 ncbi Gluconobacter oxydans 621H6
GMET269799 ncbi Geobacter metallireducens GS-156
GKAU235909 ncbi Geobacillus kaustophilus HTA4265
GBET391165 ncbi Granulibacter bethesdensis CGDNIH16
FSP1855 Frankia sp. EAN1pec5
ESP42895 Enterobacter sp.6
ERUM302409 ncbi Ehrlichia ruminantium Gardel5
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden5
ELIT314225 ncbi Erythrobacter litoralis HTCC25945
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas5
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DSHI398580 ncbi Dinoroseobacter shibae DFL 126
DRED349161 ncbi Desulfotomaculum reducens MI-15
DOLE96561 ncbi Desulfococcus oleovorans Hxd35
DNOD246195 ncbi Dichelobacter nodosus VCS1703A5
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124726
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA5
CTET212717 ncbi Clostridium tetani E885
CSP78 Caulobacter sp.6
CSP501479 Citreicella sp. SE456
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10625
CJAP155077 Cellvibrio japonicus5
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334065
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C6
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1116
CBUR360115 ncbi Coxiella burnetii RSA 3316
CBUR227377 ncbi Coxiella burnetii RSA 4936
CAULO ncbi Caulobacter crescentus CB155
BXEN266265 ncbi Burkholderia xenovorans LB4005
BWEI315730 ncbi Bacillus weihenstephanensis KBAB45
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTRI382640 ncbi Bartonella tribocorum CIP 1054766
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13305
BSP376 Bradyrhizobium sp.6
BSP36773 Burkholderia sp.5
BQUI283165 ncbi Bartonella quintana Toulouse5
BPUM315750 ncbi Bacillus pumilus SAFR-0325
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BOVI236 Brucella ovis5
BMEL359391 ncbi Brucella melitensis biovar Abortus 23085
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M5
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233445
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1106
BHEN283166 ncbi Bartonella henselae Houston-15
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB505
BBAC360095 ncbi Bartonella bacilliformis KC5835
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
AVAR240292 ncbi Anabaena variabilis ATCC 294135
ASP76114 ncbi Aromatoleum aromaticum EbN15
ASP62928 ncbi Azoarcus sp. BH725
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL036
APLE416269 ncbi Actinobacillus pleuropneumoniae L206
AORE350688 ncbi Alkaliphilus oremlandii OhILAs5
AMAR329726 ncbi Acaryochloris marina MBIC110175
AMAR234826 ncbi Anaplasma marginale St. Maries5
AHYD196024 Aeromonas hydrophila dhakensis6
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232706
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-16
ACRY349163 ncbi Acidiphilium cryptum JF-55
ACAU438753 ncbi Azorhizobium caulinodans ORS 5716
ABOR393595 ncbi Alcanivorax borkumensis SK26
ABAU360910 ncbi Bordetella avium 197N5
AAVE397945 ncbi Acidovorax citrulli AAC00-15


Names of the homologs of the genes in the group in each of these orgs
  EG11059   EG10454   EG10327   EG10217   EG10169   EG10088   
ZMOB264203 ZMO1407ZMO0810ZMO0582ZMO0583ZMO0590ZMO1407
YPSE349747 YPSIP31758_1419YPSIP31758_1420YPSIP31758_1423YPSIP31758_1422YPSIP31758_1425YPSIP31758_4013
YPSE273123 YPTB2619YPTB2618YPTB2615YPTB2616YPTB2613YPTB3790
YPES386656 YPDSF_1996YPDSF_1995YPDSF_1992YPDSF_1993YPDSF_1990YPDSF_3313
YPES377628 YPN_2182YPN_2181YPN_2178YPN_2179YPN_2176YPN_3597
YPES360102 YPA_2079YPA_2078YPA_2075YPA_2076YPA_2073YPA_3777
YPES349746 YPANGOLA_A0362YPANGOLA_A0361YPANGOLA_A0358YPANGOLA_A0359YPANGOLA_A0356YPANGOLA_A4112
YPES214092 YPO2765YPO2766YPO2769YPO2768YPO2771YPO3949
YPES187410 Y1598Y1599Y1602Y1601Y1604Y3880
YENT393305 YE1308YE1309YE1312YE1311YE1314YE4018
XORY360094 XOOORF_3618XOOORF_3613XOOORF_4356XOOORF_3607XOOORF_4354XOOORF_3618
XORY342109 XOO3087XOO3083XOO3475XOO3078XOO3473XOO3087
XORY291331 XOO3259XOO3255XOO3679XOO3250XOO3677XOO3259
XFAS405440 XFASM12_0724XFASM12_0726XFASM12_1026XFASM12_0809XFASM12_1024XFASM12_0724
XFAS183190 PD_0608PD_0610PD_0854PD_0685PD_0852PD_0608
XFAS160492 XF1371XF1373XF1946XF1467XF1948XF1371
XCAM487884 XCC-B100_1613XCC-B100_1616XCC-B100_3402XCC-B100_1622XCC-B100_3400XCC-B100_1613
XCAM316273 XCAORF_2883XCAORF_2879XCAORF_1146XCAORF_2871XCAORF_1148XCAORF_2883
XCAM314565 XC_1569XC_1572XC_3285XC_1578XC_3283XC_1569
XCAM190485 XCC2549XCC2546XCC0950XCC2540XCC0952XCC2549
XAXO190486 XAC2723XAC2720XAC1029XAC2715XAC1031XAC2723
XAUT78245 XAUT_2214XAUT_3303XAUT_1697XAUT_1696XAUT_2401XAUT_2214
WPIP955 WD_0954WD_1068WD_1052WD_0129WD_0954
VVUL216895 VV1_1989VV1_1992VV1_1994VV1_1993VV1_1996VV1_3115
VVUL196600 VV2427VV2425VV2422VV2424VV2420VV1171
VPAR223926 VP2192VP2190VP2188VP2189VP2186VP2124
VFIS312309 VF1698VF1696VF1694VF1695VF1692VF1645
VEIS391735 VEIS_4870VEIS_3374VEIS_4866VEIS_3372VEIS_4872
VCHO345073 VC0395_A1691VC0395_A0520VC0395_A0522VC0395_A0521VC0395_A0524VC0395_A1621
VCHO VC2107VC0999VC1001VC1000VC1003VC2036
TTUR377629 TERTU_2497TERTU_2492TERTU_2493TERTU_2488TERTU_2499
TERY203124 TERY_0587TERY_2986TERY_1603TERY_2684TERY_0587
TELO197221 TLR0069TLR0107TLR0190TLR1643TLR0069
TDEN292415 TBD_1916TBD_1911TBD_1912TBD_1909TBD_1919
TCRU317025 TCR_0800TCR_0801TCR_0806TCR_0805TCR_0800
STYP99287 STM2369STM2368STM2365STM2366STM2363STM3539
SSP644076 SCH4B_0950SCH4B_2549SCH4B_2876SCH4B_2877SCH4B_1988SCH4B_0950
SSP321332 CYB_1568CYB_1582CYB_1382CYB_2665CYB_1568
SSP292414 TM1040_3459TM1040_2384TM1040_2675TM1040_2676TM1040_1785TM1040_3459
SSON300269 SSO_2377SSO_2376SSO_2373SSO_2374SSO_2371SSO_3673
SSED425104 SSED_1650SSED_1652SSED_1653SSED_1655SSED_1650
SPRO399741 SPRO_3335SPRO_3334SPRO_3331SPRO_3332SPRO_3329SPRO_4648
SPEA398579 SPEA_1613SPEA_1617SPEA_1618SPEA_1620SPEA_1613
SMEL266834 SMC04410SMC01099SMC02763SMC02764SMC00555SMC04410
SMED366394 SMED_3182SMED_0056SMED_3240SMED_3239SMED_0728SMED_3182
SLOI323850 SHEW_2308SHEW_2306SHEW_2305SHEW_2303SHEW_2308
SLAC55218 SL1157_1166SL1157_0231SL1157_A0071SL1157_A0072SL1157_2669SL1157_1166
SHIGELLA USGTRUAFOLCACCDCVPAASD
SHAL458817 SHAL_2643SHAL_2641SHAL_2640SHAL_2638SHAL_2643
SGLO343509 SG1620SG1619SG1616SG1617SG1614SG2330
SFLE373384 SFV_2388SFV_2387SFV_2384SFV_2385SFV_2382SFV_3442
SFLE198214 AAN43908.1AAN43907.1AAN43904.1AAN43905.1AAN43902.1AAN44916.1
SENT454169 SEHA_C2611SEHA_C2610SEHA_C2607SEHA_C2608SEHA_C2605SEHA_C3848
SENT321314 SCH_2371SCH_2370SCH_2367SCH_2368SCH_2365SCH_3469
SENT295319 SPA0495SPA0496SPA0499SPA0498SPA0501SPA3390
SENT220341 STY2600STY2599STY2596STY2597STY2593STY4271
SENT209261 T0495T0496T0499T0498T0501T3981
SELO269084 SYC2246_DSYC1890_DSYC0598_CSYC2139_CSYC2246_D
SDYS300267 SDY_2518SDY_2517SDY_2514SDY_2515SDY_2512SDY_3579
SDEG203122 SDE_2081SDE_2076SDE_2077SDE_2073SDE_2083
SBOY300268 SBO_2356SBO_2355SBO_2352SBO_2353SBO_2350SBO_3431
SALA317655 SALA_2718SALA_0248SALA_1061SALA_1062SALA_1805SALA_2718
RSPH349102 RSPH17025_0034RSPH17025_0502RSPH17025_2985RSPH17025_2986RSPH17025_1063RSPH17025_0034
RSPH349101 RSPH17029_0044RSPH17029_2224RSPH17029_2589RSPH17029_2588RSPH17029_1118RSPH17029_0044
RSPH272943 RSP_1376RSP_0571RSP_0930RSP_0929RSP_2455RSP_1376
RSOL267608 RSC1985RSC1979RSC1980RSC1977RSC1987
RRUB269796 RRU_A1196RRU_A3352RRU_A3431RRU_A3430RRU_A0405RRU_A1196
RPOM246200 SPO_3712SPO_3143SPO_3818SPO_3817SPO_2675SPO_3712
RPAL316058 RPB_0338RPB_0675RPB_0632RPB_0633RPB_2453RPB_0338
RPAL316057 RPD_0493RPD_0079RPD_0200RPD_0199RPD_2996RPD_0493
RPAL316056 RPC_0237RPC_0807RPC_0389RPC_0390RPC_2283RPC_0237
RPAL316055 RPE_0484RPE_0654RPE_0457RPE_0456RPE_3339RPE_0484
RPAL258594 RPA0230RPA0623RPA0072RPA0071RPA3090RPA0230
RMET266264 RMET_2469RMET_2463RMET_2464RMET_2461RMET_2471
RLEG216596 RL4715RL0434RL0024RL0023RL1547RL4715
RFER338969 RFER_1790RFER_2686RFER_1786RFER_2684RFER_1792
REUT381666 H16_A2616H16_A2610H16_A2611H16_A2608H16_A2618
REUT264198 REUT_A2308REUT_A2302REUT_A2303REUT_A2300REUT_A2310
RETL347834 RHE_CH04100RHE_CH00415RHE_CH00024RHE_CH00023RHE_CH01429RHE_CH04100
RDEN375451 RD1_0306RD1_2070RD1_0327RD1_0328RD1_3246RD1_0306
PTHE370438 PTH_1286PTH_0355PTH_0813PTH_2217PTH_1286
PSYR223283 PSPTO_3819PSPTO_3817PSPTO_3814PSPTO_3815PSPTO_3812PSPTO_2176
PSYR205918 PSYR_1660PSYR_1662PSYR_1665PSYR_1664PSYR_1667PSYR_1986
PSTU379731 PST_1776PST_1778PST_1781PST_1780PST_1783PST_1775
PSP312153 PNUC_0770PNUC_0775PNUC_0774PNUC_0777PNUC_0768
PSP296591 BPRO_3614BPRO_1604BPRO_3618BPRO_1606BPRO_3612
PPUT76869 PPUTGB1_1526PPUTGB1_1528PPUTGB1_1531PPUTGB1_1530PPUTGB1_1533PPUTGB1_1520
PPUT351746 PPUT_3769PPUT_3767PPUT_3764PPUT_3765PPUT_3762PPUT_3770
PPUT160488 PP_1992PP_1994PP_1997PP_1996PP_1999PP_1989
PPRO298386 PBPRA2655PBPRA2653PBPRA2651PBPRA2652PBPRA2649PBPRA2579
PNAP365044 PNAP_3044PNAP_1089PNAP_3048PNAP_1091PNAP_3042
PMUL272843 PM0486PM0637PM0635PM0636PM0702PM1632
PMEN399739 PMEN_2719PMEN_2717PMEN_2714PMEN_2715PMEN_2712PMEN_2720
PLUM243265 PLU3174PLU3173PLU3170PLU3171PLU3168PLU0007
PING357804 PING_1993PING_1969PING_1968PING_1966PING_3206
PHAL326442 PSHAA2078PSHAA2075PSHAA2073PSHAA2074PSHAA2071PSHAB0528
PFLU220664 PFL_2068PFL_2071PFL_2074PFL_2073PFL_2076PFL_2067
PFLU216595 PFLU4191PFLU4189PFLU4186PFLU4187PFLU4184PFLU4192
PFLU205922 PFL_1894PFL_1896PFL_1899PFL_1898PFL_1901PFL_1893
PENT384676 PSEEN1687PSEEN1689PSEEN1692PSEEN1691PSEEN1694PSEEN1653
PCAR338963 PCAR_1903PCAR_1901PCAR_0738PCAR_0737PCAR_2681PCAR_1903
PATL342610 PATL_3363PATL_1604PATL_1606PATL_1605PATL_1608PATL_3363
PARC259536 PSYC_1408PSYC_0435PSYC_0434PSYC_1283PSYC_1523
PAER208964 PA3116PA3114PA3111PA3112PA3109PA3117
PAER208963 PA14_23810PA14_23840PA14_23880PA14_23860PA14_23900PA14_23800
OCAR504832 OCAR_4279OCAR_7538OCAR_4480OCAR_4479OCAR_6381OCAR_4279
OANT439375 OANT_3290OANT_1346OANT_0814OANT_0813OANT_0561OANT_3290
NWIN323098 NWI_2793NWI_3066NWI_0052NWI_0053NWI_2016NWI_2793
NSP103690 ALL3680ALL4189ALR1026ALL2364ALL3680
NOCE323261 NOC_1016NOC_1018NOC_1023NOC_1022NOC_1672
NMUL323848 NMUL_A1914NMUL_A1909NMUL_A1910NMUL_A1907NMUL_A1917
NMEN374833 NMCC_0161NMCC_0652NMCC_0635NMCC_0650NMCC_0105
NMEN272831 NMC2017NMC0644NMC0629NMC0642NMC2058
NMEN122587 NMA0402NMA0896NMA0880NMA0894NMA0351
NMEN122586 NMB_2036NMB_0693NMB_0679NMB_0691NMB_2079
NHAM323097 NHAM_3593NHAM_3695NHAM_0060NHAM_0061NHAM_2292NHAM_3593
NGON242231 NGO1811NGO0266NGO0249NGO0264NGO1997
NEUT335283 NEUT_1150NEUT_1155NEUT_1154NEUT_1157NEUT_1148
NEUR228410 NE0691NE0696NE0695NE0698NE0689
NARO279238 SARO_1410SARO_2893SARO_1300SARO_1955SARO_1410
MSUC221988 MS1101MS1175MS1173MS1174MS1002MS0006
MSP409 M446_3185M446_4238M446_0475M446_0476M446_2598M446_3185
MSP400668 MMWYL1_2040MMWYL1_2045MMWYL1_2044MMWYL1_2047MMWYL1_2094
MSP266779 MESO_3384MESO_0391MESO_0663MESO_0984MESO_3384
MPET420662 MPE_A2159MPE_A3265MPE_A2155MPE_A2152MPE_A2161
MMAR394221 MMAR10_2876MMAR10_0447MMAR10_0088MMAR10_0089MMAR10_1206MMAR10_2876
MMAG342108 AMB0587AMB0241AMB4014AMB4012AMB2090AMB0587
MLOT266835 MLL4392MLL4852MLR5075MLL7834MLL4392
MFLA265072 MFLA_1700MFLA_1695MFLA_1696MFLA_1693MFLA_1702
MEXT419610 MEXT_2702MEXT_1634MEXT_4444MEXT_4445MEXT_3933MEXT_2702
MCAP243233 MCA_2062MCA_2497MCA_2492MCA_2493MCA_2490
MAQU351348 MAQU_1560MAQU_1555MAQU_1556MAQU_1553MAQU_1562
MAER449447 MAE_62690MAE_52520MAE_15990MAE_57530MAE_62690
LPNE400673 LPC_1767LPC_0727LPC_0758LPC_0757LPC_0760LPC_1767
LPNE297246 LPP2250LPP1266LPP1296LPP1295LPP1298LPP2250
LPNE297245 LPL2221LPL1265LPL1295LPL1294LPL1297LPL2221
LPNE272624 LPG2302LPG1302LPG1342LPG1341LPG1344LPG2302
LMON169963 LMO1437LMO2598LMO1551LMO1573LMO1437
LCHO395495 LCHO_1680LCHO_1685LCHO_1684LCHO_1687LCHO_1678
KPNE272620 GKPORF_B2019GKPORF_B2018GKPORF_B2015GKPORF_B2016GKPORF_B2013GKPORF_B3142
JSP375286 MMA_2166MMA_2161MMA_2162MMA_2159MMA_2168
JSP290400 JANN_0114JANN_3462JANN_0059JANN_0060JANN_1711JANN_0114
ILOI283942 IL1019IL1017IL1015IL1016IL1013IL1019
HSOM228400 HSM_1361HSM_0804HSM_1359HSM_1360HSM_1395HSM_0472
HSOM205914 HS_0882HS_1258HS_0880HS_0881HS_0917HS_1552
HNEP81032 HNE_0061HNE_0515HNE_3472HNE_3473HNE_0061
HINF71421 HI_1433HI_1644HI_1261HI_1260HI_1206HI_0646
HINF281310 NTHI1700NTHI1395NTHI1903NTHI1904NTHI1377NTHI0765
HHAL349124 HHAL_1808HHAL_1806HHAL_1801HHAL_1802HHAL_1799HHAL_1808
HDUC233412 HD_0363HD_1104HD_1465HD_1466HD_1208HD_0847
HCHE349521 HCH_02434HCH_02439HCH_02438HCH_02441HCH_02431
HARS204773 HEAR1221HEAR1226HEAR1225HEAR1228HEAR1218
GURA351605 GURA_1047GURA_1048GURA_3277GURA_3279GURA_4049GURA_1046
GTHE420246 GTNG_1129GTNG_0136GTNG_2566GTNG_2666GTNG_1129
GOXY290633 GOX0878GOX1834GOX1205GOX1204GOX1639GOX0878
GMET269799 GMET_0604GMET_0605GMET_2475GMET_2476GMET_0393GMET_0603
GKAU235909 GK1275GK0138GK2637GK2742GK1275
GBET391165 GBCGDNIH1_2081GBCGDNIH1_0690GBCGDNIH1_2012GBCGDNIH1_2013GBCGDNIH1_0471GBCGDNIH1_2081
FSP1855 FRANEAN1_6574FRANEAN1_6020FRANEAN1_5271FRANEAN1_3951FRANEAN1_6574
ESP42895 ENT638_2868ENT638_2867ENT638_2864ENT638_2865ENT638_2862ENT638_3841
ERUM302409 ERGA_CDS_09430ERGA_CDS_04360ERGA_CDS_03740ERGA_CDS_07150ERGA_CDS_09430
ERUM254945 ERWE_CDS_09510ERWE_CDS_04410ERWE_CDS_03790ERWE_CDS_07230ERWE_CDS_09510
ELIT314225 ELI_07430ELI_02060ELI_07600ELI_06080ELI_07430
EFER585054 EFER_0844EFER_0845EFER_0848EFER_0847EFER_0850EFER_3410
ECOO157 USGTRUAFOLCACCDCVPAASD
ECOL83334 ECS3203ECS3202ECS3199ECS3200ECS3197ECS4278
ECOL585397 ECED1_2783ECED1_2782ECED1_2779ECED1_2780ECED1_2777ECED1_4108
ECOL585057 ECIAI39_2468ECIAI39_2467ECIAI39_2464ECIAI39_2465ECIAI39_2462ECIAI39_3914
ECOL585056 ECUMN_2659ECUMN_2658ECUMN_2655ECUMN_2656ECUMN_2653ECUMN_3897
ECOL585055 EC55989_2563EC55989_2562EC55989_2559EC55989_2560EC55989_2557EC55989_3843
ECOL585035 ECS88_2467ECS88_2466ECS88_2462ECS88_2463ECS88_2460ECS88_3831
ECOL585034 ECIAI1_2396ECIAI1_2395ECIAI1_2392ECIAI1_2393ECIAI1_2390ECIAI1_3579
ECOL481805 ECOLC_1333ECOLC_1334ECOLC_1337ECOLC_1336ECOLC_1339ECOLC_0279
ECOL469008 ECBD_1340ECBD_1341ECBD_1344ECBD_1343ECBD_1346ECBD_0309
ECOL439855 ECSMS35_2475ECSMS35_2474ECSMS35_2471ECSMS35_2472ECSMS35_2469ECSMS35_3715
ECOL413997 ECB_02244ECB_02243ECB_02240ECB_02241ECB_02238ECB_03285
ECOL409438 ECSE_2628ECSE_2627ECSE_2624ECSE_2625ECSE_2622ECSE_3702
ECOL405955 APECO1_4245APECO1_4246APECO1_4249APECO1_4248APECO1_4251APECO1_3024
ECOL364106 UTI89_C2604UTI89_C2603UTI89_C2600UTI89_C2601UTI89_C2597UTI89_C3942
ECOL362663 ECP_2358ECP_2357ECP_2354ECP_2355ECP_2352ECP_3527
ECOL331111 ECE24377A_2613ECE24377A_2612ECE24377A_2609ECE24377A_2610ECE24377A_2607ECE24377A_3912
ECOL316407 ECK2313:JW2316:B2319ECK2312:JW2315:B2318ECK2309:JW2312:B2315ECK2310:JW2313:B2316ECK2307:JW2310:B2313ECK3419:JW3396:B3433
ECOL199310 C2864C2863C2860C2861C2857C4220
ECHA205920 ECH_0016ECH_0622ECH_0702ECH_0307ECH_0016
ECAR218491 ECA3059ECA3058ECA3055ECA3056ECA3053ECA4155
DSHI398580 DSHI_3240DSHI_1938DSHI_0132DSHI_0131DSHI_2130DSHI_3240
DRED349161 DRED_1941DRED_0255DRED_2552DRED_2315DRED_1941
DOLE96561 DOLE_2220DOLE_0466DOLE_0467DOLE_0780DOLE_2220
DNOD246195 DNO_0710DNO_0404DNO_0405DNO_0402DNO_1053
DARO159087 DARO_0868DARO_0873DARO_0872DARO_0875DARO_0865
CVIO243365 CV_2767CV_2764CV_2518CV_2760CV_2516CV_2768
CVES412965 COSY_0851COSY_0881COSY_0895COSY_0926COSY_0851
CTET212717 CTC_02293CTC_01851CTC_02301CTC_00135CTC_02293
CSP78 CAUL_4618CAUL_4567CAUL_4979CAUL_4978CAUL_2503CAUL_4072
CSP501479 CSE45_3113CSE45_0598CSE45_3139CSE45_3140CSE45_1754CSE45_3113
CSAL290398 CSAL_1259CSAL_1264CSAL_1263CSAL_1266CSAL_2450
CPSY167879 CPS_3805CPS_3803CPS_3801CPS_3802CPS_3799CPS_3805
CPEL335992 SAR11_0245SAR11_0485SAR11_0486SAR11_0700SAR11_0245
CJAP155077 CJA_1749CJA_1754CJA_1753CJA_1756CJA_1747
CHUT269798 CHU_0139CHU_0483CHU_1542CHU_3281CHU_0139
CDES477974 DAUD_0945DAUD_0255DAUD_1472DAUD_1053DAUD_2220DAUD_0945
CBUR434922 COXBU7E912_0940COXBU7E912_0956COXBU7E912_0958COXBU7E912_0957COXBU7E912_0960COXBU7E912_0940
CBUR360115 COXBURSA331_A1074COXBURSA331_A1055COXBURSA331_A1053COXBURSA331_A1054COXBURSA331_A1051COXBURSA331_A1074
CBUR227377 CBU_0875CBU_0892CBU_0894CBU_0893CBU_0896CBU_0875
CAULO CC0253CC0278CC3541CC3542CC3485
BXEN266265 BXE_B2883BXE_B2877BXE_B2878BXE_B2875BXE_B2885
BWEI315730 BCERKBAB4_3570BCERKBAB4_0407BCERKBAB4_4302BCERKBAB4_4431BCERKBAB4_3570
BVIE269482 BCEP1808_4460BCEP1808_4466BCEP1808_4465BCEP1808_4468BCEP1808_4458
BTRI382640 BT_1768BT_0077BT_0034BT_0035BT_0807BT_1768
BTHA271848 BTH_II0677BTH_II0683BTH_II0682BTH_II0685BTH_II0675
BSUI470137 BSUIS_B0879BSUIS_B1028BSUIS_A1947BSUIS_A0474BSUIS_B0879
BSUI204722 BR_A0887BR_A1033BR_2107BR_0448BR_A0887
BSP376 BRADO0358BRADO0772BRADO0088BRADO0089BRADO3281BRADO0358
BSP36773 BCEP18194_B2127BCEP18194_B2121BCEP18194_B2122BCEP18194_B2119BCEP18194_B2130
BQUI283165 BQ10170BQ00670BQ00310BQ00320BQ04440
BPUM315750 BPUM_1579BPUM_0135BPUM_2448BPUM_2564BPUM_1579
BPSE320373 BURPS668_A2447BURPS668_A2441BURPS668_A2442BURPS668_A2439BURPS668_A2449
BPSE320372 BURPS1710B_B0911BURPS1710B_B0905BURPS1710B_B0906BURPS1710B_B0903BURPS1710B_B0913
BPSE272560 BPSS1701BPSS1695BPSS1696BPSS1693BPSS1704
BPET94624 BPET2846BPET2161BPET1739BPET2163BPET2848
BPER257313 BP1486BP1412BP3591BP1414BP1484
BPAR257311 BPP1947BPP1519BPP3321BPP1521BPP1945
BOVI236 GBOORFA0914GBOORFA1067GBOORF2100GBOORF0477GBOORFA0914
BMEL359391 BAB2_0349BAB2_0995BAB1_2109BAB1_0473BAB2_0349
BMEL224914 BMEII0407BMEII0266BMEI2020BMEI1487BMEII0407
BMAL320389 BMA10247_A0527BMA10247_A0533BMA10247_A0532BMA10247_A0535BMA10247_A0525
BMAL320388 BMASAVP1_1647BMASAVP1_1653BMASAVP1_1652BMASAVP1_1655BMASAVP1_1645
BMAL243160 BMA_A1723BMA_A1717BMA_A1718BMA_A1715BMA_A1725
BJAP224911 BLL0501BLL8107BLR0748BLR0747BLL4061BLL0501
BHEN283166 BH12890BH00740BH00340BH05250BH12890
BCEN331272 BCEN2424_3956BCEN2424_3962BCEN2424_3961BCEN2424_3964BCEN2424_3953
BCEN331271 BCEN_4411BCEN_4405BCEN_4406BCEN_4403BCEN_4414
BCAN483179 BCAN_B0905BCAN_B1053BCAN_A2151BCAN_A0452BCAN_B0905
BBRO257310 BB2135BB2597BB3772BB2599BB2133
BBAC360095 BARBAKC583_1101BARBAKC583_1321BARBAKC583_1351BARBAKC583_0487BARBAKC583_1101
BAMB398577 BAMMC406_3851BAMMC406_3857BAMMC406_3856BAMMC406_3859BAMMC406_3849
BAMB339670 BAMB_3346BAMB_3352BAMB_3351BAMB_3354BAMB_3344
BABO262698 BRUAB2_0345BRUAB2_0973BRUAB1_2082BRUAB1_0470BRUAB2_0345
AVAR240292 AVA_3606AVA_0717AVA_3683AVA_0185AVA_3606
ASP76114 EBA4770EBA4777EBA4778EBB164EBA4761
ASP62928 AZO1045AZO1050AZO1049AZO1052AZO1042
ASP232721 AJS_3237AJS_2739AJS_3241AJS_2737AJS_3235
ASAL382245 ASA_2533ASA_2531ASA_2529ASA_2530ASA_2434ASA_2349
APLE434271 APJL_1235APJL_0914APJL_0627APJL_0626APJL_0449APJL_0005
APLE416269 APL_1222APL_0902APL_0632APL_0631APL_0424APL_0005
AORE350688 CLOS_1162CLOS_1682CLOS_2028CLOS_0396CLOS_1162
AMAR329726 AM1_3447AM1_1251AM1_1737AM1_3882AM1_3447
AMAR234826 AM1277AM661AM699AM160AM1277
AHYD196024 AHA_2682AHA_2680AHA_2678AHA_2679AHA_1869AHA_1945
AFER243159 AFE_1021AFE_1024AFE_1029AFE_1028AFE_1030AFE_1021
AEHR187272 MLG_1231MLG_1234MLG_1239MLG_1238MLG_1241MLG_1231
ACRY349163 ACRY_1717ACRY_0411ACRY_0844ACRY_0845ACRY_0404
ACAU438753 AZC_3731AZC_0796AZC_1025AZC_1024AZC_0534AZC_3731
ABOR393595 ABO_1465ABO_1463ABO_1458ABO_1459ABO_1456ABO_1466
ABAU360910 BAV2265BAV1725BAV1104BAV1727BAV2267
AAVE397945 AAVE_1217AAVE_1860AAVE_1213AAVE_1862AAVE_1219


Organism features enriched in list (features available for 239 out of the 256 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00009832292
Disease:Bubonic_plague 0.004572166
Disease:Dysentery 0.004572166
Disease:Gastroenteritis 0.00134811113
Endospores:No 9.791e-1642211
Endospores:Yes 7.408e-7653
GC_Content_Range4:0-40 3.162e-2926213
GC_Content_Range4:40-60 1.355e-8124224
GC_Content_Range4:60-100 6.152e-989145
GC_Content_Range7:0-30 2.999e-7447
GC_Content_Range7:30-40 1.709e-1922166
GC_Content_Range7:50-60 5.692e-1377107
GC_Content_Range7:60-70 8.442e-1289134
Genome_Size_Range5:0-2 4.930e-2513155
Genome_Size_Range5:4-6 1.274e-16121184
Genome_Size_Range5:6-10 4.569e-63447
Genome_Size_Range9:0-1 8.549e-6127
Genome_Size_Range9:1-2 1.043e-1812128
Genome_Size_Range9:2-3 0.005389838120
Genome_Size_Range9:4-5 6.397e-86396
Genome_Size_Range9:5-6 1.997e-75888
Genome_Size_Range9:6-8 8.182e-73038
Gram_Stain:Gram_Neg 1.328e-34206333
Gram_Stain:Gram_Pos 3.851e-289150
Habitat:Multiple 0.006575085178
Habitat:Specialized 0.00175331253
Motility:No 3.173e-1819151
Motility:Yes 1.108e-10147267
Optimal_temp.:- 0.0046847119257
Optimal_temp.:25-30 2.828e-81919
Optimal_temp.:30-37 0.0008199118
Optimal_temp.:35-37 7.581e-61313
Optimal_temp.:37 0.003693132106
Oxygen_Req:Aerobic 0.000342094185
Oxygen_Req:Anaerobic 6.301e-1114102
Oxygen_Req:Facultative 0.0005653100201
Pathogenic_in:Plant 0.00848301115
Shape:Coccobacillus 0.00079051011
Shape:Coccus 4.845e-71482
Shape:Rod 2.101e-16189347
Shape:Spiral 0.0001240434
Temp._range:Thermophilic 0.0013803635



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 115
Effective number of orgs (counting one per cluster within 468 clusters): 92

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols0
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17281
STOK273063 ncbi Sulfolobus tokodaii 70
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSOL273057 ncbi Sulfolobus solfataricus P20
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
PTOR263820 ncbi Picrophilus torridus DSM 97901
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PMOB403833 ncbi Petrotoga mobilis SJ951
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
NPHA348780 ncbi Natronomonas pharaonis DSM 21601
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN1
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGIL350054 ncbi Mycobacterium gilvum PYR-GCK0
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1300
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566010
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1970
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5500
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-11
HSAL478009 ncbi Halobacterium salinarum R11
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430491
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba1
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B11
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS1
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130320
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
BTUR314724 ncbi Borrelia turicatae 91E1350
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH0
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B310
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K10
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040


Names of the homologs of the genes in the group in each of these orgs
  EG11059   EG10454   EG10327   EG10217   EG10169   EG10088   
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116 TVN0757
TPEN368408
TPAL243276
TKOD69014
TDEN243275 TDE_1973
TACI273075 TA0637
STOK273063
SSUI391296 SSU98_0717
SSUI391295 SSU05_0718
SSOL273057
SPYO370554 MGAS10750_SPY1544
SPYO370553
SPYO370552 MGAS10270_SPY1552
SPYO370551
SPYO319701 M28_SPY1474
SPYO293653
SPYO286636 M6_SPY1479
SPYO198466 SPYM3_1518
SPYO193567 SPS0348
SPYO186103 SPYM18_1816
SPYO160490
SMAR399550
SACI330779
PTOR263820 PTO1256
PPEN278197 PEPE_0130
PMOB403833 PMOB_1456
PISL384616
PHOR70601
PFUR186497
PAST100379
PARS340102
PAER178306
PABY272844
NPHA348780 NP1478A
MVAN350058 MVAN_5503
MTHE349307
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631 ML1471
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGIL350054
MGEN243273
MFLO265311
MCAP340047
MBAR269797
MART243272
MAEO419665
MACE188937
LSAK314315 LSA0850
LINT267671
LINT189518
LBRE387344 LVIS_1252
LBOR355277
LBOR355276
LBIF456481 LEPBI_I0549
LBIF355278 LBF_0530
KRAD266940 KRAD_3497
IHOS453591
HWAL362976 HQ1767A
HSP64091 VNG0412G
HSAL478009 OE1615R
HPYL85963 JHP0884
HPYL357544 HPAG1_0934
HPY HP0950
HMUK485914 HMUK_3147
HMAR272569 PNG7379
HBUT415426
HACI382638 HAC_1026
FNOD381764 FNOD_0344
CSUL444179 SMGWSS_202
CPNE182082 CPB0059
CPNE138677 CPJ0058
CPNE115713 CPN0058
CPNE115711 CP_0717
CMUR243161 TC_0566
CMET456442
CMAQ397948
CKOR374847
CGLU196627
CDIP257309 DIP1785
BTUR314724
BLON206672 BL1353
BHER314723
BGAR290434
BBUR224326
BAFZ390236
AYEL322098
AURANTIMONAS
APER272557
AFUL224325


Organism features enriched in list (features available for 111 out of the 115 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Pairs 0.004027112112
Arrangment:Singles 0.000755369286
Disease:Leptospirosis 0.001257144
Disease:Pharyngitis 0.007076258
Disease:Wide_range_of_infections 7.854e-91111
Disease:bronchitis_and_pneumonitis 0.007076258
Endospores:No 3.477e-2487211
GC_Content_Range4:0-40 0.000072358213
GC_Content_Range4:60-100 9.475e-611145
GC_Content_Range7:0-30 0.00006502047
GC_Content_Range7:60-70 0.000019510134
Genome_Size_Range5:0-2 7.625e-2171155
Genome_Size_Range5:4-6 1.554e-118184
Genome_Size_Range5:6-10 0.0003762147
Genome_Size_Range9:0-1 3.010e-81827
Genome_Size_Range9:1-2 6.734e-1253128
Genome_Size_Range9:4-5 0.0000969696
Genome_Size_Range9:5-6 4.668e-7288
Genome_Size_Range9:6-8 0.0023529138
Gram_Stain:Gram_Neg 6.902e-1133333
Habitat:Host-associated 0.001798752206
Habitat:Multiple 5.851e-812178
Habitat:Specialized 0.00004242253
Habitat:Terrestrial 0.0091824131
Motility:No 0.000071345151
Optimal_temp.:- 0.000020730257
Optimal_temp.:100 0.006751133
Optimal_temp.:35-40 0.006751133
Optimal_temp.:37 0.006652129106
Optimal_temp.:85 0.001257144
Oxygen_Req:Anaerobic 0.000023935102
Pathogenic_in:Animal 0.0041214566
Pathogenic_in:Swine 0.000232355
Salinity:Extreme_halophilic 0.003252057
Salinity:Non-halophilic 0.000022836106
Shape:Coccus 0.00124132682
Shape:Irregular_coccus 1.587e-81417
Shape:Rod 4.845e-1727347
Shape:Sphere 6.585e-101619
Shape:Spiral 0.00002001734
Temp._range:Hyperthermophilic 6.673e-91723
Temp._range:Mesophilic 0.001630279473



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ORGANISMS ENRICHED FOR GROUP:

Total number of orgs: 6
Effective number of orgs (counting one per cluster within 468 clusters): 5

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name    Pvalue       # genes in tgt genome found in org  # genes in group found in org  
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden 0.00412143375
ERUM302409 ncbi Ehrlichia ruminantium Gardel 0.00430733405
AMAR234826 ncbi Anaplasma marginale St. Maries 0.00463183455
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas 0.00549053575
WPIP955 Wolbachia pipientis 0.00778613835
BTRI382640 ncbi Bartonella tribocorum CIP 105476 0.00924957926


Names of the homologs of the genes in the group in each of these orgs
  EG11059   EG10454   EG10327   EG10217   EG10169   EG10088   
ERUM254945 ERWE_CDS_09510ERWE_CDS_04410ERWE_CDS_03790ERWE_CDS_07230ERWE_CDS_09510
ERUM302409 ERGA_CDS_09430ERGA_CDS_04360ERGA_CDS_03740ERGA_CDS_07150ERGA_CDS_09430
AMAR234826 AM1277AM661AM699AM160AM1277
ECHA205920 ECH_0016ECH_0622ECH_0702ECH_0307ECH_0016
WPIP955 WD_0954WD_1068WD_1052WD_0129WD_0954
BTRI382640 BT_1768BT_0077BT_0034BT_0035BT_0807BT_1768


Organism features enriched in list (features available for 5 out of the 6 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Disease:African_heartwater 0.008576311
Disease:Bartinellosis 0.008576311
Disease:Bovine_anaplasmosis 0.008576311
Disease:Heartwater 0.008576311
Disease:Monocytic_ehrlichiosis 0.008576311
Genome_Size_Range9:1-2 0.00879844128
Habitat:Host-associated 0.00533615206
Pathogenic_in:Rat 0.008576311
Pathogenic_in:Ruminant 0.000175923
Shape:Pleomorphic_coccus 0.000058922



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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
GLYCOCAT-PWY (glycogen degradation I)2462060.7002
PWY-5918 (heme biosynthesis I)2722130.6659
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392390.6531
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862170.6513
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951720.6464
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002220.6446
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491440.6331
PWY-4041 (γ-glutamyl cycle)2792090.6190
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912140.6175
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962160.6165
PWY-5913 (TCA cycle variation IV)3012170.6092
PWY-1269 (CMP-KDO biosynthesis I)3252260.6038
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251810.6014
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482330.5913
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181760.5911
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2902090.5876
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831570.5859
TYRFUMCAT-PWY (tyrosine degradation I)1841550.5678
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491870.5640
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491870.5640
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911580.5626
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982460.5600
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551880.5521
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292170.5346
GLUCONSUPER-PWY (D-gluconate degradation)2291720.5271
PWY-5028 (histidine degradation II)1301190.5265
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761440.5194
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222460.5066
DAPLYSINESYN-PWY (lysine biosynthesis I)3422170.5014
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561300.4962
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911470.4848
P344-PWY (acrylonitrile degradation)2101550.4742
AST-PWY (arginine degradation II (AST pathway))1201060.4690
GALACTCAT-PWY (D-galactonate degradation)104960.4660
PWY-5148 (acyl-CoA hydrolysis)2271620.4659
REDCITCYC (TCA cycle variation II)1741350.4618
PWY-5386 (methylglyoxal degradation I)3051960.4612
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351130.4555
P601-PWY (D-camphor degradation)95890.4534
PWY0-862 (cis-dodecenoyl biosynthesis)3432100.4529
PWY-5084 (2-ketoglutarate dehydrogenase complex)3262030.4510
SULFATE-CYS-PWY (superpathway of sulfate assimilation and cysteine biosynthesis)3652180.4505
PWY-46 (putrescine biosynthesis III)1381140.4501
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))1381140.4501
PWY-3162 (tryptophan degradation V (side chain pathway))94880.4500
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3742210.4484
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162350.4437
PWY0-501 (lipoate biosynthesis and incorporation I)3852240.4418
PWY-5188 (tetrapyrrole biosynthesis I)4392420.4406
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96880.4387
PWY-5340 (sulfate activation for sulfonation)3852230.4351
GALACTARDEG-PWY (D-galactarate degradation I)1511190.4336
SO4ASSIM-PWY (sulfate reduction I (assimilatory))3111940.4320
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001890.4291
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112960.4246
KDOSYN-PWY (KDO transfer to lipid IVA I)1801320.4177
PWY-1501 (mandelate degradation I)73710.4159
GALACTITOLCAT-PWY (galactitol degradation)73710.4159
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791310.4142
GLUT-REDOX-PWY (glutathione redox reactions II)2461630.4132
PROSYN-PWY (proline biosynthesis I)4752490.4125
PHENYLALANINE-DEG1-PWY (phenylalanine degradation I (aerobic))2891810.4072
GLUCARDEG-PWY (D-glucarate degradation I)1521160.4067
PWY1-3 (polyhydroxybutyrate biosynthesis)115950.4015



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10454   EG10327   EG10217   EG10169   EG10088   
EG110590.9993070.9992630.99910.9988620.999966
EG104540.999580.9995880.9995020.999414
EG103270.9999110.9997260.998937
EG102170.9995310.999067
EG101690.998502
EG10088



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PAIRWISE BLAST SCORES:

  EG11059   EG10454   EG10327   EG10217   EG10169   EG10088   
EG110590.0f0-----
EG10454-0.0f0----
EG10327--0.0f0---
EG10217---0.0f0--
EG10169----0.0f0-
EG10088-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10169 EG10217 EG10327 EG10454 EG11059 (centered at EG10217)
EG10088 (centered at EG10088)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11059   EG10454   EG10327   EG10217   EG10169   EG10088   
391/623405/623399/623410/623252/623388/623
AAEO224324:0:Tyes999-11220-999
AAUR290340:2:Tyes-5260--604
AAVE397945:0:Tyes-464006426
ABAC204669:0:Tyes--046292159-
ABAU360910:0:Tyes-116562006221167
ABOR393595:0:Tyes9723010
ABUT367737:0:Tyes1338--0-1338
ACAU438753:0:Tyes323826850250103238
ACEL351607:0:Tyes16730405--1673
ACRY349163:8:Tyes131274394400-
ADEH290397:0:Tyes32290885884--
AEHR187272:0:Tyes0387100
AFER243159:0:Tyes038790
AHYD196024:0:Tyes791789787788076
ALAI441768:0:Tyes327--0--
AMAR234826:0:Tyes809364391-0809
AMAR329726:9:Tyes217504812605-2175
AMET293826:0:Tyes01260---0
ANAE240017:0:Tyes1115-0--1115
AORE350688:0:Tyes762128016540-762
APHA212042:0:Tyes7860232---
APLE416269:0:Tyes12239066336324260
APLE434271:0:Tno12068835995984330
ASAL382245:5:Tyes171169167168790
ASP1667:3:Tyes--0--639
ASP232721:2:Tyes-48424880482
ASP62928:0:Tyes-387100
ASP62977:0:Tyes-0159158-3
ASP76114:2:Tyes-387100
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