CANDIDATE ID: 495

CANDIDATE ID: 495

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9916420e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- M004 (rpe) (b3386)
   Products of gene:
     - RIBULP3EPIM-MONOMER (ribulose phosphate 3-epimerase)
       Reactions:
        D-ribulose-5-phosphate  =  D-xylulose-5-phosphate
         In pathways
         PWY-5257 (PWY-5257)
         PENTOSE-P-PWY (pentose phosphate pathway)
         PHOTOALL-PWY (PHOTOALL-PWY)
         DARABCAT-PWY (DARABCAT-PWY)
         RIBITOLUTIL-PWY (RIBITOLUTIL-PWY)
         P122-PWY (P122-PWY)
         P21-PWY (P21-PWY)
         PWY-1861 (PWY-1861)
         P185-PWY (P185-PWY)
         P124-PWY (P124-PWY)
         NONOXIPENT-PWY (pentose phosphate pathway (non-oxidative branch))
         PWY-5723 (PWY-5723)
         CALVIN-PWY (CALVIN-PWY)

- EG12113 (hofQ) (b3391)
   Products of gene:
     - EG12113-MONOMER (protein involved in utilization of DNA as a carbon source)

- EG11183 (damX) (b3388)
   Products of gene:
     - EG11183-MONOMER (cell division protein DamX)

- EG10204 (dam) (b3387)
   Products of gene:
     - EG10204-MONOMER (DNA adenine methylase)
       Reactions:
        a DNA adenine + S-adenosyl-L-methionine  =  a DNA 6-methylaminopurine + S-adenosyl-L-homocysteine

- EG10081 (aroK) (b3390)
   Products of gene:
     - AROK-MONOMER (shikimate kinase I)
       Reactions:
        shikimate + ATP  ->  shikimate-3-phosphate + ADP + 2 H+
         In pathways
         PWY-6165 (PWY-6165)
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         COMPLETE-ARO-PWY (superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis)
         PWY-6163 (PWY-6163)
         ARO-PWY (chorismate biosynthesis I)

- EG10074 (aroB) (b3389)
   Products of gene:
     - AROB-MONOMER (3-dehydroquinate synthase)
       Reactions:
        3-deoxy-D-arabino-heptulosonate-7-phosphate  ->  phosphate + 3-dehydroquinate
         In pathways
         ALL-CHORISMATE-PWY (superpathway of chorismate)
         COMPLETE-ARO-PWY (superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis)
         PWY-6164 (PWY-6164)
         ARO-PWY (chorismate biosynthesis I)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 118
Effective number of orgs (counting one per cluster within 468 clusters): 71

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola6
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XFAS160492 ncbi Xylella fastidiosa 9a5c5
VVUL216895 ncbi Vibrio vulnificus CMCP65
VVUL196600 ncbi Vibrio vulnificus YJ0165
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106335
VFIS312309 ncbi Vibrio fischeri ES1146
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
SSP94122 ncbi Shewanella sp. ANA-35
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB35
SPRO399741 ncbi Serratia proteamaculans 5686
SPEA398579 ncbi Shewanella pealeana ATCC 7003455
SONE211586 ncbi Shewanella oneidensis MR-15
SLOI323850 ncbi Shewanella loihica PV-45
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB45
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1975
SDEN318161 ncbi Shewanella denitrificans OS2175
SDEG203122 ncbi Saccharophagus degradans 2-405
SBOY300268 ncbi Shigella boydii Sb2276
SBAL402882 ncbi Shewanella baltica OS1855
SBAL399599 ncbi Shewanella baltica OS1955
RSPH349101 ncbi Rhodobacter sphaeroides ATCC 170295
RSPH272943 ncbi Rhodobacter sphaeroides 2.4.15
RMET266264 ncbi Ralstonia metallidurans CH345
RFER338969 ncbi Rhodoferax ferrireducens T1185
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSP296591 ncbi Polaromonas sp. JS6665
PPUT76869 ncbi Pseudomonas putida GB-15
PPRO298386 ncbi Photobacterium profundum SS95
PMUL272843 ncbi Pasteurella multocida multocida Pm705
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PING357804 ncbi Psychromonas ingrahamii 375
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1255
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PATL342610 ncbi Pseudoalteromonas atlantica T6c5
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMEN374833 ncbi Neisseria meningitidis 0534425
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E5
MSP400668 ncbi Marinomonas sp. MWYL15
MFLA265072 ncbi Methylobacillus flagellatus KT5
LPNE400673 ncbi Legionella pneumophila Corby5
LPNE297246 ncbi Legionella pneumophila Paris5
LPNE297245 ncbi Legionella pneumophila Lens5
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 15
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille5
ILOI283942 ncbi Idiomarina loihiensis L2TR5
HSOM228400 ncbi Haemophilus somnus 23365
HSOM205914 ncbi Haemophilus somnus 129PT5
HINF71421 ncbi Haemophilus influenzae Rd KW205
HINF281310 ncbi Haemophilus influenzae 86-028NP5
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
GMET269799 ncbi Geobacter metallireducens GS-155
ESP42895 Enterobacter sp.6
EFER585054 ncbi Escherichia fergusonii ATCC 354696
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL405955 ncbi Escherichia coli APEC O16
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5365
ECOL331111 ncbi Escherichia coli E24377A6
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10435
DNOD246195 ncbi Dichelobacter nodosus VCS1703A5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CSAL290398 ncbi Chromohalobacter salexigens DSM 30435
CPSY167879 ncbi Colwellia psychrerythraea 34H5
CBUR360115 ncbi Coxiella burnetii RSA 3315
CBUR227377 ncbi Coxiella burnetii RSA 4935
BTHA271848 ncbi Burkholderia thailandensis E2645
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BBRO257310 ncbi Bordetella bronchiseptica RB505
BAMB339670 ncbi Burkholderia ambifaria AMMD5
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L205
AHYD196024 Aeromonas hydrophila dhakensis6
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AAVE397945 ncbi Acidovorax citrulli AAC00-15


Names of the homologs of the genes in the group in each of these orgs
  M004   EG12113   EG11183   EG10204   EG10081   EG10074   
YPSE349747 YPSIP31758_3962YPSIP31758_3967YPSIP31758_3964YPSIP31758_3963YPSIP31758_3966YPSIP31758_3965
YPSE273123 YPTB3746YPTB3751YPTB3748YPTB3747YPTB3750YPTB3749
YPES386656 YPDSF_0082YPDSF_0077YPDSF_0080YPDSF_0081YPDSF_0078YPDSF_0079
YPES377628 YPN_3910YPN_3915YPN_3912YPN_3911YPN_3914YPN_3913
YPES360102 YPA_3314YPA_3319YPA_3316YPA_3315YPA_3318YPA_3317
YPES349746 YPANGOLA_A3723YPANGOLA_A3728YPANGOLA_A3725YPANGOLA_A3724YPANGOLA_A3727YPANGOLA_A3726
YPES214092 YPO0155YPO0150YPO0153YPO0154YPO0151YPO0152
YPES187410 Y3938Y3932Y3936Y3937Y3933Y3934
YENT393305 YE3971YE3976YE3973YE3972YE3975YE3974
XFAS160492 XF0208XF0373XF0935XF1335XF1334
VVUL216895 VV1_1386VV1_1381VV1_1385VV1_1382VV1_1383
VVUL196600 VV2985VV2990VV2986VV2989VV2988
VPAR223926 VP2741VP2746VP2742VP2745VP2744
VFIS312309 VF2288VF2293VF2290VF2289VF2292VF2291
VCHO345073 VC0395_A2202VC0395_A2207VC0395_A2204VC0395_A2203VC0395_A2206VC0395_A2205
VCHO VC2625VC2630VC2627VC2626VC2629VC2628
STYP99287 STM3483STM3488STM3485STM3484STM3487STM3486
SSP94122 SHEWANA3_3888SHEWANA3_3895SHEWANA3_3891SHEWANA3_3894SHEWANA3_3893
SSON300269 SSO_3517SSO_3522SSO_3519SSO_3518SSO_3521SSO_3520
SSED425104 SSED_4259SSED_4266SSED_4262SSED_4265SSED_4264
SPRO399741 SPRO_4601SPRO_4606SPRO_4603SPRO_4602SPRO_4605SPRO_4604
SPEA398579 SPEA_0244SPEA_0237SPEA_0241SPEA_0238SPEA_0239
SONE211586 SO_0292SO_0285SO_0289SO_0286SO_0287
SLOI323850 SHEW_0219SHEW_0212SHEW_0216SHEW_0213SHEW_0214
SHIGELLA RPEHOFQDAMXDAMAROKAROB
SHAL458817 SHAL_4076SHAL_4083SHAL_4079SHAL_4082SHAL_4081
SGLO343509 SG2305SG1282SG2307SG2306SG2309SG2308
SFLE373384 SFV_3391SFV_3396SFV_3393SFV_3392SFV_3395SFV_3394
SFLE198214 AAN44866.1AAN44871.1AAN44868.1AAN44867.1AAN44870.1AAN44869.1
SENT454169 SEHA_C3789SEHA_C3794SEHA_C3791SEHA_C3790SEHA_C3793SEHA_C3792
SENT321314 SCH_3415SCH_3420SCH_3417SCH_3416SCH_3419SCH_3418
SENT295319 SPA3348SPA3353SPA3350SPA3349SPA3352SPA3351
SENT220341 STY4313STY4308STY4311STY4312STY4309STY4310
SENT209261 T4023T4018T4021T4022T4019T4020
SDYS300267 SDY_3693SDY_3691SDY_3692SDY_3689SDY_3690
SDEN318161 SDEN_0267SDEN_0260SDEN_0264SDEN_0261SDEN_0262
SDEG203122 SDE_0746SDE_2687SDE_2684SDE_2686SDE_2685
SBOY300268 SBO_3373SBO_3378SBO_3375SBO_3374SBO_3377SBO_3376
SBAL402882 SHEW185_4077SHEW185_4085SHEW185_4081SHEW185_4084SHEW185_4083
SBAL399599 SBAL195_4195SBAL195_4203SBAL195_4199SBAL195_4202SBAL195_4201
RSPH349101 RSPH17029_1430RSPH17029_0557RSPH17029_3376RSPH17029_1479RSPH17029_1478
RSPH272943 RSP_2864RSP_1909RSP_3635RSP_2817RSP_2818
RMET266264 RMET_3176RMET_3268RMET_5483RMET_4010RMET_3266
RFER338969 RFER_0532RFER_2923RFER_1822RFER_2925RFER_2926
PSYR223283 PSPTO_0566PSPTO_5128PSPTO_3388PSPTO_5127PSPTO_5126
PSP296591 BPRO_4466BPRO_0785BPRO_3313BPRO_0786BPRO_0787
PPUT76869 PPUTGB1_0446PPUTGB1_5130PPUTGB1_1221PPUTGB1_5129PPUTGB1_5128
PPRO298386 PBPRA0284PBPRA0279PBPRA0283PBPRA0280PBPRA0281
PMUL272843 PM1619PM1225PM1222PM1224PM1223
PLUM243265 PLU0086PLU0091PLU0088PLU0087PLU0090PLU0089
PING357804 PING_0167PING_0162PING_0166PING_0163PING_0164
PHAL326442 PSHAA2710PSHAA2716PSHAA2712PSHAA2715PSHAA2714
PFLU220664 PFL_5631PFL_0449PFL_0452PFL_0450PFL_0451
PFLU216595 PFLU5563PFLU4070PFLU0413PFLU0411PFLU0412
PFLU205922 PFL_5120PFL_0409PFL_0412PFL_0410PFL_0411
PENT384676 PSEEN0442PSEEN0333PSEEN0336PSEEN0334PSEEN0335
PATL342610 PATL_0659PATL_0667PATL_0663PATL_0666PATL_0665
PAER208964 PA0607PA5040PA5037PA5039PA5038
PAER208963 PA14_07910PA14_66620PA14_66580PA14_66610PA14_66600
NOCE323261 NOC_2492NOC_0251NOC_0344NOC_0252NOC_0253
NMEN374833 NMCC_1125NMCC_0416NMCC_0325NMCC_0415NMCC_0414
NMEN122587 NMA1413NMA0650NMA0561NMA0648NMA0647
NMEN122586 NMB_1244NMB_1812NMB_1895NMB_1813NMB_1814
NGON242231 NGO0758NGO0094NGO0007NGO0093NGO0092
MSUC221988 MS2330MS1970MS1967MS1969MS1968
MSP400668 MMWYL1_1057MMWYL1_4118MMWYL1_4115MMWYL1_4117MMWYL1_4116
MFLA265072 MFLA_2472MFLA_2457MFLA_2682MFLA_2456MFLA_2455
LPNE400673 LPC_2628LPC_2359LPC_2640LPC_2358LPC_2357
LPNE297246 LPP0721LPP0993LPP0708LPP0994LPP0995
LPNE297245 LPL0701LPL0962LPL0690LPL0963LPL0964
LPNE272624 LPG0664LPG0931LPG2075LPG0932LPG0933
KPNE272620 GKPORF_B3098GKPORF_B3103GKPORF_B3100GKPORF_B3099GKPORF_B3102GKPORF_B3101
JSP375286 MMA_0237MMA_3364MMA_3447MMA_3363MMA_3363
ILOI283942 IL2324IL2471IL2475IL2472IL2473
HSOM228400 HSM_0042HSM_1067HSM_1064HSM_1066HSM_1065
HSOM205914 HS_0175HS_1112HS_1115HS_1113HS_1114
HINF71421 HI_0566HI_0435HI_0209HI_0207HI_0208
HINF281310 NTHI0698NTHI0560NTHI0307NTHI0305NTHI0306
HDUC233412 HD_1929HD_0434HD_0420HD_0423HD_0422
GMET269799 GMET_0067GMET_0975GMET_3140GMET_0977GMET_0978
ESP42895 ENT638_3799ENT638_3804ENT638_3801ENT638_3800ENT638_3803ENT638_3802
EFER585054 EFER_3352EFER_3357EFER_3354EFER_3353EFER_3356EFER_3355
ECOO157 RPEHOFQDAMXDAMAROKAROB
ECOL83334 ECS4228ECS4233ECS4230ECS4229ECS4232ECS4231
ECOL585397 ECED1_4044ECED1_4049ECED1_4046ECED1_4045ECED1_4048ECED1_4047
ECOL585057 ECIAI39_3864ECIAI39_3869ECIAI39_3866ECIAI39_3865ECIAI39_3868ECIAI39_3867
ECOL585056 ECUMN_3844ECUMN_3849ECUMN_3846ECUMN_3845ECUMN_3848ECUMN_3847
ECOL585055 EC55989_3791EC55989_3796EC55989_3793EC55989_3792EC55989_3795EC55989_3794
ECOL585035 ECS88_3771ECS88_3776ECS88_3773ECS88_3772ECS88_3775ECS88_3774
ECOL585034 ECIAI1_3524ECIAI1_3529ECIAI1_3526ECIAI1_3525ECIAI1_3528ECIAI1_3527
ECOL481805 ECOLC_0327ECOLC_0322ECOLC_0325ECOLC_0326ECOLC_0323ECOLC_0324
ECOL469008 ECBD_0361ECBD_0356ECBD_0359ECBD_0360ECBD_0357ECBD_0358
ECOL439855 ECSMS35_3662ECSMS35_3667ECSMS35_3664ECSMS35_3663ECSMS35_3666ECSMS35_3665
ECOL413997 ECB_03238ECB_03243ECB_03240ECB_03239ECB_03242ECB_03241
ECOL409438 ECSE_3647ECSE_3652ECSE_3649ECSE_3648ECSE_3651ECSE_3650
ECOL405955 APECO1_3077APECO1_3072APECO1_3075APECO1_3076APECO1_3073APECO1_3074
ECOL364106 UTI89_C3884UTI89_C3889UTI89_C3886UTI89_C3885UTI89_C3888UTI89_C3887
ECOL362663 ECP_3471ECP_3477ECP_3472ECP_3476ECP_3475
ECOL331111 ECE24377A_3855ECE24377A_3861ECE24377A_3858ECE24377A_3857ECE24377A_3860ECE24377A_3859
ECOL316407 ECK3373:JW3349:B3386ECK3378:JW3354:B3391ECK3375:JW3351:B3388ECK3374:JW3350:B3387ECK3377:JW5947:B3390ECK3376:JW3352:B3389
ECOL199310 C4156C4161C4158C4157C4160C4159
ECAR218491 ECA4089ECA4094ECA4090ECA4093ECA4092
DNOD246195 DNO_0540DNO_0348DNO_1161DNO_0611DNO_1084
CVIO243365 CV_2182CV_0829CV_2111CV_0828CV_0827
CSAL290398 CSAL_2328CSAL_0612CSAL_1368CSAL_0613CSAL_0614
CPSY167879 CPS_0479CPS_0471CPS_0475CPS_0472CPS_0473
CBUR360115 COXBURSA331_A2074COXBURSA331_A2096COXBURSA331_A0650COXBURSA331_A2097COXBURSA331_A2098
CBUR227377 CBU_1872CBU_1891CBU_0535CBU_1892CBU_1893
BTHA271848 BTH_I2907BTH_I3025BTH_I1923BTH_I3024BTH_I3023
BPSE320372 BURPS1710B_A3856BURPS1710B_A4024BURPS1710B_A1824BURPS1710B_A4023BURPS1710B_A4022
BBRO257310 BB4624BB2097BB3607BB0071BB0072
BAMB339670 BAMB_0441BAMB_0310BAMB_1850BAMB_0311BAMB_0312
ASAL382245 ASA_1129ASA_1124ASA_1127ASA_1128ASA_1125ASA_1126
APLE434271 APJL_1856APJL_0201APJL_0193APJL_0195APJL_0194
APLE416269 APL_1820APL_0200APL_0192APL_0194APL_0193
AHYD196024 AHA_3185AHA_3190AHA_3187AHA_3186AHA_3189AHA_3188
AFER243159 AFE_3086AFE_2305AFE_1517AFE_2306AFE_2307
AAVE397945 AAVE_0438AAVE_1000AAVE_4108AAVE_1002AAVE_1003


Organism features enriched in list (features available for 115 out of the 118 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0029405992
Arrangment:Pairs 0.000202236112
Arrangment:Singles 0.000427172286
Disease:Bubonic_plague 0.000052966
Disease:Dysentery 0.000052966
Disease:Gastroenteritis 0.00001001013
Disease:Legionnaire's_disease 0.001451144
Endospores:No 0.000099925211
GC_Content_Range4:0-40 4.549e-1311213
GC_Content_Range4:40-60 6.650e-1986224
GC_Content_Range4:60-100 0.003266218145
GC_Content_Range7:30-40 5.010e-811166
GC_Content_Range7:40-50 0.000098938117
GC_Content_Range7:50-60 1.678e-1148107
Genome_Size_Range5:0-2 1.125e-124155
Genome_Size_Range5:2-4 0.000148023197
Genome_Size_Range5:4-6 7.900e-1876184
Genome_Size_Range9:1-2 1.281e-94128
Genome_Size_Range9:3-4 0.0040420777
Genome_Size_Range9:4-5 1.058e-73996
Genome_Size_Range9:5-6 8.563e-83788
Gram_Stain:Gram_Neg 3.735e-26111333
Habitat:Multiple 0.004661646178
Motility:No 3.382e-115151
Motility:Yes 4.942e-1082267
Optimal_temp.:35-37 0.0001100913
Oxygen_Req:Anaerobic 3.391e-65102
Oxygen_Req:Facultative 2.135e-1678201
Pathogenic_in:Animal 0.00522952166
Pathogenic_in:Human 0.000985156213
Pathogenic_in:No 3.198e-624226
Shape:Coccus 0.0000398482
Shape:Rod 2.104e-13101347
Temp._range:Mesophilic 0.0001807106473
Temp._range:Psychrophilic 0.002370169



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 203
Effective number of orgs (counting one per cluster within 468 clusters): 156

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi0
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I1
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS11
TPEN368408 ncbi Thermofilum pendens Hrk 50
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TLET416591 ncbi Thermotoga lettingae TMO1
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TDEN326298 ncbi Sulfurimonas denitrificans DSM 12511
TDEN243275 ncbi Treponema denticola ATCC 354050
TACI273075 ncbi Thermoplasma acidophilum DSM 17281
STOK273063 ncbi Sulfolobus tokodaii 70
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP387093 ncbi Sulfurovum sp. NBC37-11
SSOL273057 ncbi Sulfolobus solfataricus P20
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153050
SPYO370554 ncbi Streptococcus pyogenes MGAS107500
SPYO370553 ncbi Streptococcus pyogenes MGAS20960
SPYO370552 ncbi Streptococcus pyogenes MGAS102700
SPYO370551 ncbi Streptococcus pyogenes MGAS94290
SPYO319701 ncbi Streptococcus pyogenes MGAS61800
SPYO293653 ncbi Streptococcus pyogenes MGAS50050
SPYO286636 ncbi Streptococcus pyogenes MGAS103940
SPYO198466 ncbi Streptococcus pyogenes MGAS3150
SPYO193567 ncbi Streptococcus pyogenes SSI-10
SPYO186103 ncbi Streptococcus pyogenes MGAS82320
SPYO160490 ncbi Streptococcus pyogenes M1 GAS0
SPNE1313 Streptococcus pneumoniae1
SMAR399550 ncbi Staphylothermus marinus F10
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14350
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23381
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122280
SEPI176279 ncbi Staphylococcus epidermidis RP62A0
SAUR93062 ncbi Staphylococcus aureus aureus COL0
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83250
SAUR426430 ncbi Staphylococcus aureus aureus Newman0
SAUR418127 ncbi Staphylococcus aureus aureus Mu30
SAUR367830 Staphylococcus aureus aureus USA3000
SAUR359787 ncbi Staphylococcus aureus aureus JH10
SAUR359786 ncbi Staphylococcus aureus aureus JH90
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4760
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2520
SAUR273036 ncbi Staphylococcus aureus RF1220
SAUR196620 ncbi Staphylococcus aureus aureus MW20
SAUR158879 ncbi Staphylococcus aureus aureus N3150
SAUR158878 ncbi Staphylococcus aureus aureus Mu500
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington0
RRIC452659 ncbi Rickettsia rickettsii Iowa0
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith0
RPRO272947 ncbi Rickettsia prowazekii Madrid E0
RMAS416276 ncbi Rickettsia massiliae MTU51
RFEL315456 ncbi Rickettsia felis URRWXCal21
RCON272944 ncbi Rickettsia conorii Malish 70
RCAN293613 ncbi Rickettsia canadensis McKiel0
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RBEL336407 ncbi Rickettsia bellii RML369-C1
RAKA293614 ncbi Rickettsia akari Hartford0
PTOR263820 ncbi Picrophilus torridus DSM 97900
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257450
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR146891 ncbi Prochlorococcus marinus AS96011
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PHOR70601 ncbi Pyrococcus horikoshii OT31
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PAST100379 Onion yellows phytoplasma1
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PACN267747 ncbi Propionibacterium acnes KPA1712020
PABY272844 ncbi Pyrococcus abyssi GE50
OTSU357244 ncbi Orientia tsutsugamushi Boryong1
OIHE221109 ncbi Oceanobacillus iheyensis HTE8311
NSP35761 Nocardioides sp.1
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30911
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-21
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K1
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR426368 ncbi Methanococcus maripaludis C71
MMAR402880 ncbi Methanococcus maripaludis C51
MMAR267377 ncbi Methanococcus maripaludis S21
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26611
MHYO295358 ncbi Mycoplasma hyopneumoniae 2321
MHYO262722 ncbi Mycoplasma hyopneumoniae 74481
MHYO262719 ncbi Mycoplasma hyopneumoniae J1
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBUR259564 ncbi Methanococcoides burtonii DSM 62420
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LXYL281090 ncbi Leifsonia xyli xyli CTCB070
LREU557436 ncbi Lactobacillus reuteri DSM 200160
LPLA220668 ncbi Lactobacillus plantarum WCFS10
LJOH257314 ncbi Lactobacillus johnsonii NCC 5330
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-001
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333230
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118420
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3650
LCAS321967 ncbi Lactobacillus casei ATCC 3341
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LACI272621 ncbi Lactobacillus acidophilus NCFM0
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J990
HPY ncbi Helicobacter pylori 266951
HMUK485914 ncbi Halomicrobium mukohataei DSM 122861
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
HACI382638 ncbi Helicobacter acinonychis Sheeba0
GFOR411154 ncbi Gramella forsetii KT08030
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI31
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293280
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a1
ERUM302409 ncbi Ehrlichia ruminantium Gardel0
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden0
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake0
DRAD243230 ncbi Deinococcus radiodurans R11
DGEO319795 ncbi Deinococcus geothermalis DSM 113000
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G201
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis0
CTRA471472 ncbi Chlamydia trachomatis 434/Bu0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE250
CPNE182082 ncbi Chlamydophila pneumoniae TW-1830
CPNE138677 ncbi Chlamydophila pneumoniae J1380
CPNE115713 ncbi Chlamydophila pneumoniae CWL0290
CPNE115711 ncbi Chlamydophila pneumoniae AR390
CMUR243161 ncbi Chlamydia muridarum Nigg0
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ192222 ncbi Campylobacter jejuni jejuni NCTC 111681
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFEL264202 ncbi Chlamydophila felis Fe/C-560
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CCHL340177 ncbi Chlorobium chlorochromatii CaD31
CCAV227941 ncbi Chlamydophila caviae GPIC0
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto1
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6571
CBOT498213 ncbi Clostridium botulinum B1 str. Okra1
CBOT441772 ncbi Clostridium botulinum F str. Langeland1
CBOT441771 ncbi Clostridium botulinum A str. Hall1
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193971
CBOT36826 Clostridium botulinum A1
CABO218497 ncbi Chlamydophila abortus S26/30
BTUR314724 ncbi Borrelia turicatae 91E1351
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BLON206672 ncbi Bifidobacterium longum NCC27050
BHER314723 ncbi Borrelia hermsii DAH1
BGAR290434 ncbi Borrelia garinii PBi0
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BBUR224326 ncbi Borrelia burgdorferi B310
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1001
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB1
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APHA212042 ncbi Anaplasma phagocytophilum HZ0
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG11
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040


Names of the homologs of the genes in the group in each of these orgs
  M004   EG12113   EG11183   EG10204   EG10081   EG10074   
WPIP955 WD_0712
WPIP80849
UURE95667
UURE95664
UPAR505682
UMET351160 LRC316
TWHI218496
TWHI203267
TVOL273116 TVN0849
TPEN368408
TPAL243276 TP_0810
TLET416591 TLET_0498
TKOD69014
TDEN326298 TMDEN_1020
TDEN243275
TACI273075 TA0644
STOK273063
STHE322159 STER_0690
STHE299768 STR0640
STHE264199 STU0640
SSUI391296 SSU98_1267
SSUI391295 SSU05_1252
SSP387093 SUN_1010
SSOL273057
SSAP342451
SPYO370554
SPYO370553
SPYO370552
SPYO370551
SPYO319701
SPYO293653
SPYO286636
SPYO198466
SPYO193567
SPYO186103
SPYO160490
SPNE1313 SPJ_1275
SMAR399550
SHAE279808
SERY405948 SACE_2066
SEPI176280
SEPI176279
SAUR93062
SAUR93061
SAUR426430
SAUR418127
SAUR367830
SAUR359787
SAUR359786
SAUR282459
SAUR282458
SAUR273036
SAUR196620
SAUR158879
SAUR158878
SAGA211110 GBS1448
SAGA208435 SAG_1378
SAGA205921 SAK_1411
SACI330779
RTYP257363
RRIC452659
RRIC392021
RPRO272947
RMAS416276 RMA_0755
RFEL315456 RF_0123
RCON272944
RCAN293613
RBEL391896 A1I_05665
RBEL336407 RBE_0415
RAKA293614
PTOR263820
PPEN278197
PMOB403833
PMAR93060 P9215_07671
PMAR74546 PMT9312_0682
PMAR167546 P9301ORF_0749
PMAR146891 A9601_07371
PISL384616 PISL_1774
PHOR70601 PH1032
PGIN242619
PFUR186497
PDIS435591
PAST100379 PAM318
PARS340102
PAER178306
PACN267747
PABY272844
OTSU357244 OTBS_1318
OIHE221109 OB1511
NSP35761 NOCA_2413
NSEN222891
NPHA348780
MTHE349307
MTHE187420
MSYN262723
MSTA339860 MSP_0143
MSED399549
MPUL272635
MPNE272634
MPEN272633 MYPE1230
MMYC272632
MMOB267748 MMOB3450
MMAZ192952
MMAR444158 MMARC6_0151
MMAR426368 MMARC7_1756
MMAR402880 MMARC5_0847
MMAR267377 MMP0735
MLAB410358
MKAN190192
MJAN243232 MJ_0598
MHYO295358 MHP641
MHYO262722 MHP7448_0622
MHYO262719 MHJ_0623
MGEN243273
MFLO265311
MCAP340047 MCAP_0049
MBUR259564
MBAR269797
MART243272
MAEO419665
MACE188937
LXYL281090
LREU557436
LPLA220668
LJOH257314
LINT363253 LI0652
LHEL405566 LHV_1214
LGAS324831
LDEL390333
LDEL321956
LCAS321967 LSEI_1620
LBRE387344 LVIS_0044
LACI272621
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963
HPY HP0283
HMUK485914 HMUK_0465
HMAR272569
HBUT415426
HACI382638
GFOR411154
FSP1855 FRANEAN1_1700
FSP106370 FRANCCI3_3208
FNOD381764
FMAG334413
FJOH376686
FALN326424 FRAAL5246
ERUM302409
ERUM254945
ECHA205920 ECH_0082
ECAN269484
DRAD243230 DR_0776
DGEO319795
DDES207559 DDE_2632
CTRA471473
CTRA471472
CSUL444179
CPRO264201
CPNE182082
CPNE138677
CPNE115713
CPNE115711
CMUR243161
CMIC443906 CMM_1773
CMIC31964 CMS2020
CMAQ397948
CKOR374847
CJEJ192222 CJ0451
CHUT269798
CGLU196627 CG1828
CFEL264202
CDIP257309 DIP1344
CCHL340177 CAG_0175
CCAV227941
CBOT536232 CLM_2802
CBOT515621 CLJ_B2732
CBOT498213 CLD_2135
CBOT441772 CLI_2563
CBOT441771 CLC_2357
CBOT441770 CLB_2375
CBOT36826 CBO2502
CABO218497
BTUR314724 BT0463A
BTHE226186
BLON206672
BHER314723 BH0463A
BGAR290434
BFRA295405
BFRA272559
BBUR224326
BBAC264462 BD0867
BAFZ390236
AYEL322098 AYWB_379
AURANTIMONAS
APHA212042
APER272557
ANAE240017 ANA_0819
AMAR234826
ALAI441768 ACL_1084
AFUL224325


Organism features enriched in list (features available for 191 out of the 203 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 2.373e-61517
Disease:Botulism 0.003642355
Disease:Pharyngitis 0.000120088
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 3.827e-61111
Disease:Wide_range_of_infections 3.827e-61111
Disease:bronchitis_and_pneumonitis 0.000120088
Endospores:No 7.069e-14110211
Endospores:Yes 0.0014680853
GC_Content_Range4:0-40 5.247e-20120213
GC_Content_Range4:40-60 0.000472256224
GC_Content_Range4:60-100 1.104e-1215145
GC_Content_Range7:0-30 9.322e-73147
GC_Content_Range7:30-40 1.986e-1189166
GC_Content_Range7:50-60 9.210e-715107
GC_Content_Range7:60-70 8.685e-1510134
Genome_Size_Range5:0-2 3.883e-30109155
Genome_Size_Range5:4-6 3.025e-2213184
Genome_Size_Range5:6-10 0.0000474447
Genome_Size_Range9:0-1 1.030e-62127
Genome_Size_Range9:1-2 1.149e-2188128
Genome_Size_Range9:2-3 0.005993550120
Genome_Size_Range9:3-4 0.00258801577
Genome_Size_Range9:4-5 6.047e-9996
Genome_Size_Range9:5-6 5.908e-12488
Genome_Size_Range9:6-8 0.0001940338
Gram_Stain:Gram_Neg 4.125e-1467333
Gram_Stain:Gram_Pos 0.000143967150
Habitat:Host-associated 1.298e-898206
Habitat:Multiple 8.769e-734178
Habitat:Specialized 0.00851282553
Habitat:Terrestrial 0.0003875231
Motility:No 2.329e-775151
Motility:Yes 3.649e-1053267
Optimal_temp.:- 0.000013061257
Optimal_temp.:30-37 9.813e-61518
Optimal_temp.:37 0.003536946106
Oxygen_Req:Aerobic 0.000028840185
Oxygen_Req:Anaerobic 0.000012852102
Pathogenic_in:Human 0.006061182213
Pathogenic_in:Swine 0.003642355
Shape:Coccus 9.905e-95082
Shape:Irregular_coccus 2.373e-61517
Shape:Rod 3.442e-1570347
Shape:Sphere 3.630e-61619
Temp._range:Hyperthermophilic 5.786e-61823



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181100.5901
AST-PWY (arginine degradation II (AST pathway))120760.5534
GALACTITOLCAT-PWY (galactitol degradation)73550.5244
PWY-5861 (superpathway of demethylmenaquinone-8 biosynthesis)50440.5206
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)176900.5156
GLYCOCAT-PWY (glycogen degradation I)2461080.5146
GLUCONSUPER-PWY (D-gluconate degradation)2291000.4811
ECASYN-PWY (enterobacterial common antigen biosynthesis)191900.4782
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2911120.4671
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2961130.4671
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491030.4670
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491030.4670
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3001130.4606
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901110.4605
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)195880.4511
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)225940.4382
PWY0-1315 (L-lactaldehyde degradation (anaerobic))45360.4348
PWY-1269 (CMP-KDO biosynthesis I)3251140.4301
LPSSYN-PWY (superpathway of lipopolysaccharide biosynthesis)91540.4264
PWY-5913 (TCA cycle variation IV)3011070.4098
PWY-5918 (heme biosynthesis I)2721010.4087
NAGLIPASYN-PWY (lipid IVA biosynthesis)3481150.4050
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)149700.4012
GLUTDEG-PWY (glutamate degradation II)194820.4004



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG12113   EG11183   EG10204   EG10081   EG10074   
M0040.9986930.9987020.9990460.9989420.998842
EG121130.9988820.9991610.9998010.999756
EG111830.9989630.9991080.999214
EG102040.9991580.99921
EG100810.999985
EG10074



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PAIRWISE BLAST SCORES:

  M004   EG12113   EG11183   EG10204   EG10081   EG10074   
M0040.0f0-----
EG12113-0.0f0----
EG11183--0.0f0---
EG10204---0.0f0--
EG10081----0.0f0-
EG10074-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- COMPLETE-ARO-PWY (superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis) (degree of match pw to cand: 0.095, degree of match cand to pw: 0.333, average score: 0.694)
  Genes in pathway or complex:
             0.6186 0.1867 EG11234 (ydiB) EG11234-MONOMER (YdiB)
             0.1412 0.0025 EG10078 (aroF) AROF-MONOMER (AroF)
             0.0351 0.0017 EG10080 (aroH) AROH-MONOMER (AroH)
             0.0602 0.0006 EG10079 (aroG) AROG-MONOMER (AroG)
   *in cand* 0.9995 0.9988 EG10074 (aroB) AROB-MONOMER (3-dehydroquinate synthase)
             0.3897 0.0626 EG10076 (aroD) AROD-MONOMER (AroD)
             0.9886 0.9682 EG10077 (aroE) AROE-MONOMER (shikimate dehydrogenase)
   *in cand* 0.9995 0.9989 EG10081 (aroK) AROK-MONOMER (shikimate kinase I)
             0.9987 0.9966 EG10082 (aroL) AROL-MONOMER (shikimate kinase II)
             0.3445 0.0040 EG10073 (aroA) AROA-MONOMER (3-phosphoshikimate-1-carboxyvinyltransferase)
             0.4174 0.0029 EG10075 (aroC) AROC-MONOMER (AroC)
             0.4523 0.1056 EG11025 (trpB) TRYPSYN-BPROTEIN (tryptophan synthase, β subunit)
             0.3999 0.1299 EG11024 (trpA) TRYPSYN-APROTEIN (tryptophan synthase, α subunit)
             0.5935 0.0992 EG11028 (trpE) ANTHRANSYNCOMPI-MONOMER (anthranilate synthase component I)
             0.4935 0.0771 EG11027 (trpD) ANTHRANSYNCOMPII-MONOMER (anthranilate synthase component II)
             0.5352 0.0857 EG11026 (trpC) PRAI-IGPS (indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase)
             0.8398 0.7197 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.4323 0.0853 EG11039 (tyrA) CHORISMUTPREPHENDEHYDROG-MONOMER (TyrA)
             0.3250 0.0751 EG10707 (pheA) CHORISMUTPREPHENDEHYDRAT-MONOMER (PheA)
             0.0222 0.0043 EG10096 (aspC) ASPAMINOTRANS-MONOMER (AspC)
             0.1720 0.0040 EG11040 (tyrB) TYRB-MONOMER (TyrB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9990 EG10204 (dam) EG10204-MONOMER (DNA adenine methylase)
   *in cand* 0.9991 0.9987 EG11183 (damX) EG11183-MONOMER (cell division protein DamX)
   *in cand* 0.9994 0.9987 EG12113 (hofQ) EG12113-MONOMER (protein involved in utilization of DNA as a carbon source)
   *in cand* 0.9990 0.9987 M004 (rpe) RIBULP3EPIM-MONOMER (ribulose phosphate 3-epimerase)

- ARO-PWY (chorismate biosynthesis I) (degree of match pw to cand: 0.182, degree of match cand to pw: 0.333, average score: 0.758)
  Genes in pathway or complex:
             0.4174 0.0029 EG10075 (aroC) AROC-MONOMER (AroC)
             0.3445 0.0040 EG10073 (aroA) AROA-MONOMER (3-phosphoshikimate-1-carboxyvinyltransferase)
             0.9987 0.9966 EG10082 (aroL) AROL-MONOMER (shikimate kinase II)
   *in cand* 0.9995 0.9989 EG10081 (aroK) AROK-MONOMER (shikimate kinase I)
             0.9886 0.9682 EG10077 (aroE) AROE-MONOMER (shikimate dehydrogenase)
             0.3897 0.0626 EG10076 (aroD) AROD-MONOMER (AroD)
   *in cand* 0.9995 0.9988 EG10074 (aroB) AROB-MONOMER (3-dehydroquinate synthase)
             0.0602 0.0006 EG10079 (aroG) AROG-MONOMER (AroG)
             0.0351 0.0017 EG10080 (aroH) AROH-MONOMER (AroH)
             0.1412 0.0025 EG10078 (aroF) AROF-MONOMER (AroF)
             0.6186 0.1867 EG11234 (ydiB) EG11234-MONOMER (YdiB)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9990 EG10204 (dam) EG10204-MONOMER (DNA adenine methylase)
   *in cand* 0.9991 0.9987 EG11183 (damX) EG11183-MONOMER (cell division protein DamX)
   *in cand* 0.9994 0.9987 EG12113 (hofQ) EG12113-MONOMER (protein involved in utilization of DNA as a carbon source)
   *in cand* 0.9990 0.9987 M004 (rpe) RIBULP3EPIM-MONOMER (ribulose phosphate 3-epimerase)

- ALL-CHORISMATE-PWY (superpathway of chorismate) (degree of match pw to cand: 0.035, degree of match cand to pw: 0.333, average score: 0.580)
  Genes in pathway or complex:
             0.1876 0.0715 EG10799 (purN) GART-MONOMER (phosphoribosylglycinamide formyltransferase 1)
             0.3947 0.1293 EG11375 (folE) GTP-CYCLOHYDRO-I-MONOMER (GTP cyclohydrolase I monomer)
             0.2474 0.0360 EG11138 (nudB) H2NEOPTERINP3PYROPHOSPHOHYDRO-MONOMER (dihydroneopterin triphosphate pyrophosphohydrolase)
             0.9521 0.9282 EG11673 (folB) H2NEOPTERINALDOL-MONOMER (FolB)
             0.5864 0.1887 EG11374 (folK) H2PTERIDINEPYROPHOSPHOKIN-MONOMER (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase)
             0.5203 0.1328 G6862 (folM) G6862-MONOMER (dihydromonapterin reductase / dihydrofolate reductase)
             0.7192 0.5556 EG10326 (folA) DIHYDROFOLATEREDUCT-MONOMER (dihydrofolate reductase)
             0.1202 0.0035 EG10327 (folC) FOLC-MONOMER (bifunctional folypolyglutamate synthetase / dihydrofolate synthetase)
             0.1050 0.0025 EG10328 (folD) FOLD-MONOMER (FolD)
             0.9965 0.9927 EG10682 (pabA) PABASYN-COMPII-MONOMER (PabA)
             0.4225 0.0323 EG10683 (pabB) PABASYN-COMPI-MONOMER (PabB)
             0.5498 0.1000 EG50011 (folP) H2PTEROATESYNTH-MONOMER (FolP)
             0.0210 0.0005 EG11493 (pabC) ADCLY-MONOMER (pabC)
             0.9311 0.8752 EG11369 (ubiC) CHORPYRLY-MONOMER (chorismate lyase)
             0.9386 0.8886 EG11370 (ubiA) 4OHBENZOATE-OCTAPRENYLTRANSFER-MONOMER (4-hydroxybenzoate octaprenyltransferase)
             0.7843 0.4388 EG11044 (ubiX) UBIX-MONOMER (3-octaprenyl-4-hydroxybenzoate decarboxylase together with UbiG)
             0.9235 0.8176 EG11396 (ubiD) EG11396-MONOMER (3-octaprenyl-4-hydroxybenzoate carboxy-lyase monomer)
             0.9576 0.8574 EG11476 (ubiB) 2-OCTAPRENYLPHENOL-HYDROX-MONOMER (2-octaprenylphenol hydroxylase)
             0.2841 0.0008 EG11143 (ubiG) DHHB-METHYLTRANSFER-MONOMER (UbiG)
             0.9021 0.7961 EG11324 (ubiH) OCTAPRENYL-METHOXYPHENOL-OH-MONOMER (2-octaprenyl-6-methoxyphenol hydroxylase)
             0.7615 0.2268 G6365 (ubiF) OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-MON (2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase)
             0.1720 0.0040 EG11040 (tyrB) TYRB-MONOMER (TyrB)
             0.0222 0.0043 EG10096 (aspC) ASPAMINOTRANS-MONOMER (AspC)
             0.3250 0.0751 EG10707 (pheA) CHORISMUTPREPHENDEHYDRAT-MONOMER (PheA)
             0.4323 0.0853 EG11039 (tyrA) CHORISMUTPREPHENDEHYDROG-MONOMER (TyrA)
             0.8398 0.7197 EG10497 (ilvE) BRANCHED-CHAINAMINOTRANSFER-MONOMER (IlvE)
             0.5352 0.0857 EG11026 (trpC) PRAI-IGPS (indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase)
             0.4935 0.0771 EG11027 (trpD) ANTHRANSYNCOMPII-MONOMER (anthranilate synthase component II)
             0.5935 0.0992 EG11028 (trpE) ANTHRANSYNCOMPI-MONOMER (anthranilate synthase component I)
             0.3999 0.1299 EG11024 (trpA) TRYPSYN-APROTEIN (tryptophan synthase, α subunit)
             0.4523 0.1056 EG11025 (trpB) TRYPSYN-BPROTEIN (tryptophan synthase, β subunit)
             0.4174 0.0029 EG10075 (aroC) AROC-MONOMER (AroC)
             0.3445 0.0040 EG10073 (aroA) AROA-MONOMER (3-phosphoshikimate-1-carboxyvinyltransferase)
             0.9987 0.9966 EG10082 (aroL) AROL-MONOMER (shikimate kinase II)
   *in cand* 0.9995 0.9989 EG10081 (aroK) AROK-MONOMER (shikimate kinase I)
             0.9886 0.9682 EG10077 (aroE) AROE-MONOMER (shikimate dehydrogenase)
             0.3897 0.0626 EG10076 (aroD) AROD-MONOMER (AroD)
   *in cand* 0.9995 0.9988 EG10074 (aroB) AROB-MONOMER (3-dehydroquinate synthase)
             0.0602 0.0006 EG10079 (aroG) AROG-MONOMER (AroG)
             0.0351 0.0017 EG10080 (aroH) AROH-MONOMER (AroH)
             0.1412 0.0025 EG10078 (aroF) AROF-MONOMER (AroF)
             0.6186 0.1867 EG11234 (ydiB) EG11234-MONOMER (YdiB)
             0.6480 0.0822 EG10261 (entC) ENTC-MONOMER (isochorismate synthase 1)
             0.4057 0.0739 EG10259 (entA) ENTA-MONOMER (EntA)
             0.2961 0.1380 EG10263 (entE) ENTE-MONOMER (EntE)
             0.0792 0.0471 EG10264 (entF) ENTF-PANT (aryl carrier protein / serine activating enzyme)
             0.1981 0.1086 EG10262 (entD) ENTD-MONOMER (phosphopantetheinyl transferase)
             0.3102 0.1115 EG10260 (entB) ENTB-MONOMER (EntB)
             0.3434 0.0745 EG11110 (ybgC) EG11110-MONOMER (esterase/thioesterase)
             0.4705 0.1120 EG11368 (menB) NAPHTHOATE-SYN-MONOMER (MenB)
             0.4150 0.0977 EG12438 (menH) EG12438-MONOMER ((1R,6R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase)
             0.4291 0.1119 EG10579 (menD) MEND-MONOMER (MenD)
             0.5412 0.0885 EG12362 (menF) MENF-MONOMER (MenF)
             0.3388 0.1281 EG11532 (menC) O-SUCCINYLBENZOATE-COA-SYN-MONOMER (o-succinylbenzoate synthase)
             0.3968 0.1047 EG12437 (menE) O-SUCCINYLBENZOATE-COA-LIG-MONOMER (MenE)
             0.8264 0.6774 EG11880 (menA) DMK-MONOMER (1,4-dihydroxy-2-naphthoate octaprenyltransferase)
             0.9628 0.9132 EG11473 (ubiE) 2-OCTAPRENYL-METHOXY-BENZOQ-METH-MONOMER (bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9993 0.9990 EG10204 (dam) EG10204-MONOMER (DNA adenine methylase)
   *in cand* 0.9991 0.9987 EG11183 (damX) EG11183-MONOMER (cell division protein DamX)
   *in cand* 0.9994 0.9987 EG12113 (hofQ) EG12113-MONOMER (protein involved in utilization of DNA as a carbon source)
   *in cand* 0.9990 0.9987 M004 (rpe) RIBULP3EPIM-MONOMER (ribulose phosphate 3-epimerase)
   This pathway has holes



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10074 EG10081 EG10204 EG11183 EG12113 M004 (centered at EG10074)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  M004   EG12113   EG11183   EG10204   EG10081   EG10074   
403/623230/62362/623201/623372/623409/623
AAEO224324:0:Tyes0225--861-
AAUR290340:2:Tyes0----445
AAVE397945:0:Tyes0553-3604555556
ABAC204669:0:Tyes01410-1029-2194
ABAU360910:0:Tyes3169---01
ABOR393595:0:Tyes0193--192191
ABUT367737:0:Tyes-706-523-0
ACAU438753:0:Tyes0---27192720
ACEL351607:0:Tyes0---32-
ACRY349163:8:Tyes3460--983983
ADEH290397:0:Tyes3820460---0
AEHR187272:0:Tyes750--23
AFER243159:0:Tyes1555782-0783784
AHYD196024:0:Tyes052143
ALAI441768:0:Tyes---0--
AMAR329726:9:Tyes0--166532353940
AMET293826:0:Tyes2081--174810
ANAE240017:0:Tyes-----0
AORE350688:0:Tyes0---188-
APLE416269:0:Tyes16718-021
APLE434271:0:Tno16798-021
ASAL382245:5:Tyes503412
ASP1667:3:Tyes0---588587
ASP232721:2:Tyes210575--0576
ASP62928:0:Tyes0323--322321
ASP62977:0:Tyes02479--24782477
ASP76114:2:Tyes11352--10
AVAR240292:3:Tyes4137--212003845
AYEL322098:4:Tyes---0--
BABO262698:1:Tno0---11061105
BAMB339670:3:Tno1310-157912
BAMB398577:3:Tno1430--12
BAMY326423:0:Tyes0----524
BANT260799:0:Tno2265---26890
BANT261594:2:Tno2238---26810
BANT568206:2:Tyes0---37772404
BANT592021:2:Tno2396---28410
BAPH198804:0:Tyes0---21
BAPH372461:0:Tyes0---21
BBAC264462:0:Tyes-0----
BBAC360095:0:Tyes769---10
BBRO257310:0:Tyes45932046-356201
BCAN483179:1:Tno0---11701169
BCEN331271:2:Tno0148--147146
BCEN331272:3:Tyes1450--12
BCER226900:1:Tyes2284----0
BCER288681:0:Tno2204---25700
BCER315749:1:Tyes1186--261015910
BCER405917:1:Tyes2126---25200
BCER572264:1:Tno2361---27370
BCIC186490:0:Tyes0---21
BCLA66692:0:Tyes420----0
BHAL272558:0:Tyes845--2361-0
BHEN283166:0:Tyes0---598599
BHER314723:0:Fyes---0--
BJAP224911:0:Fyes24231674--10
BLIC279010:0:Tyes1393---01989
BMAL243160:0:Tno0-----
BMAL243160:1:Tno-2--10
BMAL320388:0:Tno0-----
BMAL320388:1:Tno-0--12
BMAL320389:0:Tyes0-----
BMAL320389:1:Tyes-2--10
BMEL224914:1:Tno1108---01
BMEL359391:1:Tno0---10631062
BOVI236:1:Tyes0---986985
BPAR257311:0:Tno39081756--01
BPER257313:0:Tyes6690--10301031
BPET94624:0:Tyes01772--46384637
BPSE272560:1:Tyes0122--121120
BPSE320372:1:Tno19122079-020782077
BPSE320373:1:Tno0145--144143
BPUM315750:0:Tyes1215---01727
BQUI283165:0:Tyes0---494495
BSP107806:2:Tyes0---21
BSP36773:2:Tyes1360--12
BSP376:0:Tyes2115---00
BSUB:0:Tyes1357---02075
BSUI204722:1:Tyes0---11381137
BSUI470137:1:Tno0---954953
BTHA271848:1:Tno9611076-010751074
BTHU281309:1:Tno2188---25630
BTHU412694:1:Tno2012---23450
BTRI382640:1:Tyes0---899900
BTUR314724:0:Fyes---0--
BVIE269482:7:Tyes1390--12
BWEI315730:4:Tyes2166---25630
BXEN266265:0:Tyes---0--
BXEN266265:1:Tyes0-----
CACE272562:1:Tyes832--247540
CAULO:0:Tyes0---29502951
CBEI290402:0:Tyes0----3352
CBLO203907:0:Tyes0---21
CBLO291272:0:Tno0---21
CBOT36826:1:Tno0-----
CBOT441770:0:Tyes0-----
CBOT441771:0:Tno0-----
CBOT441772:1:Tno0-----
CBOT498213:1:Tno0-----
CBOT508765:1:Tyes0----1903
CBOT515621:2:Tyes0-----
CBOT536232:0:Tno0-----
CBUR227377:1:Tyes128413030-13041305
CBUR360115:1:Tno134413660-13671368
CBUR434922:2:Tno0-1363-2021
CCHL340177:0:Tyes0-----
CCON360104:2:Tyes12----0
CCUR360105:0:Tyes294----0
CDES477974:0:Tyes608---01
CDIF272563:1:Tyes752----0
CDIP257309:0:Tyes----0-
CEFF196164:0:Fyes0---2423
CFET360106:0:Tyes7---4750
CGLU196627:0:Tyes----0-
CHOM360107:1:Tyes0----299
CHYD246194:0:Tyes---154500
CJAP155077:0:Tyes21910--12
CJEI306537:0:Tyes0---21-
CJEJ192222:0:Tyes0-----
CJEJ195099:0:Tno276--0--
CJEJ354242:2:Tyes0----525
CJEJ360109:0:Tyes665----0
CJEJ407148:0:Tno0----545
CKLU431943:1:Tyes580--1510-0
CMET456442:0:Tyes---0255-
CMIC31964:2:Tyes0-----
CMIC443906:2:Tyes0-----
CNOV386415:0:Tyes0----781
CPEL335992:0:Tyes2570----
CPER195102:1:Tyes1042----0
CPER195103:0:Tno1284----0
CPER289380:2:Tyes---0--
CPER289380:3:Tyes1007----0
CPHY357809:0:Tyes126---1740
CPSY167879:0:Tyes80-412
CRUT413404:0:Tyes685---2250
CSAL290398:0:Tyes17560-77512
CSP501479:1:Fyes-0----
CSP501479:8:Fyes0---885886
CSP78:2:Tyes4097---10
CTEP194439:0:Tyes-0---958
CTET212717:0:Tyes773--0-1140
CVES412965:0:Tyes621---2080
CVIO243365:0:Tyes13992-132810
DARO159087:0:Tyes32960--12
DDES207559:0:Tyes0-----
DETH243164:0:Tyes----03
DHAF138119:0:Tyes2483--021912190
DNOD246195:0:Tyes1880-784259711
DOLE96561:0:Tyes1416581-02309-
DPSY177439:2:Tyes0761--26-
DRAD243230:3:Tyes----0-
DRED349161:0:Tyes701---01
DSHI398580:5:Tyes1415---10
DSP216389:0:Tyes----03
DSP255470:0:Tno---92003
DVUL882:1:Tyes1629379--0-
ECAR218491:0:Tyes05-143
ECHA205920:0:Tyes0-----
ECOL199310:0:Tno052143
ECOL316407:0:Tno503412
ECOL331111:6:Tno052143
ECOL362663:0:Tno04-132
ECOL364106:1:Tno052143
ECOL405955:2:Tyes052143
ECOL409438:6:Tyes052143
ECOL413997:0:Tno052143
ECOL439855:4:Tno052143
ECOL469008:0:Tno503412
ECOL481805:0:Tno503412
ECOL585034:0:Tno052143
ECOL585035:0:Tno052143
ECOL585055:0:Tno052143
ECOL585056:2:Tno052143
ECOL585057:0:Tno052143
ECOL585397:0:Tno052143
ECOL83334:0:Tno052143
ECOLI:0:Tno052143
ECOO157:0:Tno052143
EFAE226185:3:Tyes1453---40
EFER585054:1:Tyes052143
ELIT314225:0:Tyes22390--701700
ESP42895:1:Tyes052143
FALN326424:0:Tyes----0-
FNUC190304:0:Tyes886--01028-
FPHI484022:1:Tyes15081--0-
FRANT:0:Tno0336--335334
FSP106370:0:Tyes----0-
FSP1855:0:Tyes----0-
FSUC59374:0:Tyes13240---2067
FTUL351581:0:Tno5530--12
FTUL393011:0:Tno4910--12
FTUL393115:0:Tyes0334--333332
FTUL401614:0:Tyes862--10
FTUL418136:0:Tno0516--515514
FTUL458234:0:Tno5000--12
GBET391165:0:Tyes1525---00
GKAU235909:0:Tyes---0--
GKAU235909:1:Tyes0----1048
GMET269799:1:Tyes0910-3075912913
GOXY290633:5:Tyes0---433433
GSUL243231:0:Tyes13433--10
GTHE420246:1:Tyes0--996-1085
GURA351605:0:Tyes01612--16171618
GVIO251221:0:Tyes1049--1981990
HARS204773:0:Tyes02753--27522752
HAUR316274:2:Tyes2043--430900
HCHE349521:0:Tyes1422--10
HDUC233412:0:Tyes130314-032
HHAL349124:0:Tyes01213--12161215
HHEP235279:0:Tyes1138--0-660
HINF281310:0:Tyes365233-201
HINF374930:0:Tyes0130--375374
HINF71421:0:Tno349218-201
HMOD498761:0:Tyes1592--116710
HMUK485914:1:Tyes---0--
HNEP81032:0:Tyes32362399--01
HPY:0:Tno-----0
HPYL357544:1:Tyes---1155-0
HSOM205914:1:Tyes0942-945943944
HSOM228400:0:Tno01047-104410461045
ILOI283942:0:Tyes0147-151148149
JSP290400:1:Tyes0---17111712
JSP375286:0:Tyes03172-325931713171
KPNE272620:2:Tyes052143
KRAD266940:2:Fyes----01
LBIF355278:2:Tyes-0---867
LBIF456481:2:Tno-0---894
LBOR355276:1:Tyes-621-359-0
LBOR355277:1:Tno-0-467-617
LBRE387344:2:Tyes---0--
LCAS321967:1:Tyes0-----
LCHO395495:0:Tyes5023--10
LHEL405566:0:Tyes---0--
LINN272626:1:Tno1881--018071990
LINT189518:0:Tyes-----0
LINT189518:1:Tyes-0----
LINT267671:0:Tno-----0
LINT267671:1:Tno-0----
LINT363253:3:Tyes---0--
LLAC272622:5:Tyes260----0
LLAC272623:0:Tyes168----0
LMES203120:1:Tyes341---0-
LMON169963:0:Tno72--5750180
LMON265669:0:Tyes71---0181
LPNE272624:0:Tno0267-1409268269
LPNE297245:1:Fno11271-0272273
LPNE297246:1:Fyes13277-0278279
LPNE400673:0:Tno2662-27710
LSAK314315:0:Tyes593--0-790
LSPH444177:1:Tyes1006--0-1457
LWEL386043:0:Tyes71---0187
MABS561007:1:Tyes0---3332
MAER449447:0:Tyes4317--0265729
MAQU351348:2:Tyes26580---1
MAVI243243:0:Tyes0---4645
MBOV233413:0:Tno0---11361135
MBOV410289:0:Tno0---10981097
MCAP243233:0:Tyes21290--12
MCAP340047:0:Tyes---0--
MEXT419610:0:Tyes9580--16241624
MFLA265072:0:Tyes172-22510
MGIL350054:3:Tyes0---2928
MHUN323259:0:Tyes---8840-
MHYO262719:0:Tyes---0--
MHYO262722:0:Tno---0--
MHYO295358:0:Tno---0--
MJAN243232:2:Tyes---0--
MLEP272631:0:Tyes26---01
MLOT266835:2:Tyes9142625--10
MMAG342108:0:Tyes0---25472546
MMAR267377:0:Tyes---0--
MMAR368407:0:Tyes---01769-
MMAR394221:0:Tyes641488--01
MMAR402880:1:Tyes---0--
MMAR426368:0:Tyes---0--
MMAR444158:0:Tyes---0--
MMOB267748:0:Tyes---0--
MPEN272633:0:Tyes---0--
MPET420662:1:Tyes3592--10
MSME246196:0:Tyes35---01
MSP164756:1:Tno32---01
MSP164757:0:Tno32---01
MSP189918:2:Tyes32---01
MSP266779:3:Tyes0611--30763077
MSP400668:0:Tyes031183115-31173116
MSP409:2:Tyes41010--936935
MSTA339860:0:Tyes---0--
MSUC221988:0:Tyes3723-021
MTBCDC:0:Tno0---12181217
MTBRV:0:Tno0---11421141
MTHE264732:0:Tyes0--807634633
MTUB336982:0:Tno0---11061105
MTUB419947:0:Tyes0---11901189
MVAN350058:0:Tyes42---01
MXAN246197:0:Tyes5120----
NARO279238:0:Tyes0---18151814
NEUR228410:0:Tyes170338--01
NEUT335283:2:Tyes16921408--10
NFAR247156:2:Tyes----01
NGON242231:0:Tyes69476-07574
NHAM323097:2:Tyes2056---01
NMEN122586:0:Tno0541-623542543
NMEN122587:0:Tyes7082--10
NMEN272831:0:Tno735--07675
NMEN374833:0:Tno78890-08988
NMUL323848:3:Tyes17011913--051
NOCE323261:1:Tyes21990-8912
NSP103690:6:Tyes727--011921875
NSP35761:1:Tyes----0-
NSP387092:0:Tyes0--957-777
NWIN323098:0:Tyes1843---01
OANT439375:5:Tyes1508---01
OCAR504832:0:Tyes1390---10
OIHE221109:0:Tyes0-----
OTSU357244:0:Fyes---0--
PAER208963:0:Tyes047914788-47904789
PAER208964:0:Tno044964493-44954494
PARC259536:0:Tyes0165--164163
PAST100379:0:Tyes---0--
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PCAR338963:0:Tyes01913--19531911
PCRY335284:1:Tyes0175--174173
PENT384676:0:Tyes10403-12
PFLU205922:0:Tyes477603-12
PFLU216595:1:Tyes496835312-01
PFLU220664:0:Tyes508603-12
PHAL326442:1:Tyes06-254
PHOR70601:0:Tyes---0--
PING357804:0:Tyes50-412
PINT246198:1:Tyes---15820-
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PLUM243265:0:Fyes052143
PLUT319225:0:Tyes238---01
PMAR146891:0:Tyes-----0
PMAR167539:0:Tyes----0904
PMAR167540:0:Tyes----0590
PMAR167542:0:Tyes----0656
PMAR167546:0:Tyes-----0
PMAR167555:0:Tyes----0574
PMAR59920:0:Tno----13830
PMAR74546:0:Tyes-----0
PMAR74547:0:Tyes422---0520
PMAR93060:0:Tyes-----0
PMEN399739:0:Tyes35020--12
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PNAP365044:8:Tyes30100--23
PPRO298386:2:Tyes50-412
PPUT160488:0:Tno04649--46484647
PPUT351746:0:Tyes04543--45424541
PPUT76869:0:Tno04741-79447404739
PRUM264731:0:Tyes---01588-
PSP117:0:Tyes-6384--8900
PSP296591:2:Tyes36610-252112
PSP312153:0:Tyes612--10
PSP56811:2:Tyes1860--12
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PTHE370438:0:Tyes654--81201
RALB246199:0:Tyes---3829-0
RBEL336407:0:Tyes---0--
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RCAS383372:0:Tyes---77902
RDEN375451:4:Tyes0---18611860
RETL347834:5:Tyes0---15361535
REUT264198:3:Tyes0111--110109
REUT381666:2:Tyes0118--117116
RFEL315456:2:Tyes---0--
RFER338969:1:Tyes02391-129023932394
RLEG216596:6:Tyes0---17581757
RMAS416276:1:Tyes---0--
RMET266264:1:Tyes---14640-
RMET266264:2:Tyes092---90
RPAL258594:0:Tyes3332---10
RPAL316055:0:Tyes14872502--01
RPAL316056:0:Tyes1082---01
RPAL316057:0:Tyes1496---10
RPAL316058:0:Tyes3174---01
RPOM246200:1:Tyes0---843844
RRUB269796:1:Tyes0---13321333
RSAL288705:0:Tyes378---10
RSOL267608:1:Tyes093--9291
RSP101510:3:Fyes26---01
RSP357808:0:Tyes1522--042574259
RSPH272943:3:Tyes---0--
RSPH272943:4:Tyes9020--952951
RSPH349101:1:Tno---0--
RSPH349101:2:Tno8760--926925
RSPH349102:5:Tyes11910--12081207
RXYL266117:0:Tyes0--4759796
SACI56780:0:Tyes845854--04
SAGA205921:0:Tno-----0
SAGA208435:0:Tno-----0
SAGA211110:0:Tyes-----0
SALA317655:1:Tyes28400--15011502
SARE391037:0:Tyes26---0-
SAVE227882:1:Fyes25---0-
SBAL399599:3:Tyes07-365
SBAL402882:1:Tno07-365
SBOY300268:1:Tyes052143
SCO:2:Fyes0---3130
SDEG203122:0:Tyes019731970-19721971
SDEN318161:0:Tyes70-412
SDYS300267:1:Tyes4-2301
SELO269084:0:Tyes278--16990361
SENT209261:0:Tno503412
SENT220341:0:Tno503412
SENT295319:0:Tno052143
SENT321314:2:Tno052143
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SFLE198214:0:Tyes052143
SFLE373384:0:Tno052143
SFUM335543:0:Tyes13970--1087-
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SGOR29390:0:Tyes0----1149
SHAL458817:0:Tyes07-365
SHIGELLA:0:Tno503412
SLAC55218:1:Fyes0---27572756
SLOI323850:0:Tyes70-412
SMED366394:1:Tyes-0----
SMED366394:2:Tyes0-----
SMED366394:3:Tyes----10
SMEL266834:0:Tyes-0----
SMEL266834:1:Tyes0-----
SMEL266834:2:Tyes----10
SMUT210007:0:Tyes---0-250
SONE211586:1:Tyes70-412
SPEA398579:0:Tno70-412
SPNE1313:0:Tyes-----0
SPNE170187:0:Tyes640--442-0
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SPNE487213:0:Tno981----0
SPNE487214:0:Tno---450-0
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SRUB309807:1:Tyes0----1487
SSED425104:0:Tyes07-365
SSON300269:1:Tyes052143
SSP1131:0:Tyes0---1084200
SSP1148:0:Tyes1341--92701271
SSP292414:1:Tyes0-----
SSP292414:2:Tyes---16001
SSP321327:0:Tyes0--83624431696
SSP321332:0:Tyes462--11141620
SSP387093:0:Tyes-----0
SSP644076:4:Fyes0-----
SSP644076:7:Fyes---0165164
SSP64471:0:Tyes253---11110
SSP84588:0:Tyes0---1120198
SSP94122:1:Tyes07-365
SSUI391295:0:Tyes-----0
SSUI391296:0:Tyes-----0
STHE264199:0:Tyes-----0
STHE292459:0:Tyes0---599598
STHE299768:0:Tno-----0
STHE322159:2:Tyes-----0
STRO369723:0:Tyes26---0-
STYP99287:1:Tyes052143
SWOL335541:0:Tyes670---01
TACI273075:0:Tyes---0--
TCRU317025:0:Tyes140--19251924
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TDEN326298:0:Tyes-----0
TELO197221:0:Tyes1614--866990
TERY203124:0:Tyes1009--214603129
TFUS269800:0:Tyes0---14-
TLET416591:0:Tyes-0----
TMAR243274:0:Tyes-0--253-
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TSP28240:0:Tyes-285--0-
TTEN273068:0:Tyes451---2340
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VCHO:0:Tyes052143
VCHO345073:1:Tno052143
VEIS391735:1:Tyes5665--03
VFIS312309:2:Tyes052143
VPAR223926:1:Tyes05-143
VVUL196600:2:Tyes05-143
VVUL216895:1:Tno50-412
WPIP955:0:Tyes0-----
WSUC273121:0:Tyes0--1092-1187
XAUT78245:1:Tyes284---00
XAXO190486:0:Tyes02908--25372538
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XCAM316273:0:Tno830349--01
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YENT393305:1:Tyes052143
YPES187410:5:Tno603512
YPES214092:3:Tno503412
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YPES386656:2:Tno503412
YPSE273123:2:Tno052143
YPSE349747:2:Tno052143
ZMOB264203:0:Tyes0---586585



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