CANDIDATE ID: 498

CANDIDATE ID: 498

NUMBER OF GENES: 6
AVERAGE SCORE:    9.9935620e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages




GENE LIST:

- G6237 (dxs) (b0420)
   Products of gene:
     - DXS-MONOMER (Dxs)
     - CPLX0-743 (1-deoxyxylulose-5-phosphate synthase)
       Reactions:
        pyruvate + D-glyceraldehyde-3-phosphate + H+  ->  CO2 + 1-deoxy-D-xylulose 5-phosphate
         In pathways
         PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)
         PWY-5121 (PWY-5121)
         PWY-6270 (PWY-6270)
         PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)
         NONMEVIPP-PWY (methylerythritol phosphate pathway)
         THISYN-PWY (thiamin biosynthesis I)

- EG11098 (xseB) (b0422)
   Products of gene:
     - EG11098-MONOMER (exonuclease VII, small subunit)
     - CPLX-3946 (exonuclease VII)
       Reactions:
        EC# 3.1.11.6

- EG11072 (xseA) (b2509)
   Products of gene:
     - EG11072-MONOMER (exonuclease VII, large subunit)
     - CPLX-3946 (exonuclease VII)
       Reactions:
        EC# 3.1.11.6

- EG10666 (nusB) (b0416)
   Products of gene:
     - EG10666-MONOMER (transcription antitermination protein NusB)
     - CPLX0-7879 (NusB-NusE complex)

- EG10508 (ispA) (b0421)
   Products of gene:
     - FPPSYN-MONOMER (geranyl diphosphate synthase / farnesyl diphosphate synthase)
       Reactions:
        dimethylallyl diphosphate + isopentenyl diphosphate  ->  geranyl diphosphate + diphosphate
         In pathways
         PWY-6404 (PWY-6404)
         PWY-6146 (PWY-6146)
         POLYISOPRENSYN-PWY (polyisoprenoid biosynthesis (E. coli))
         ERGOSTEROL-SYN-PWY (ERGOSTEROL-SYN-PWY)
         PWY66-5 (PWY66-5)
         PWY-5121 (PWY-5121)
         PWY-5910 (PWY-5910)
         PWY-5122 (PWY-5122)
         PWY-6244 (PWY-6244)
         PWY-6383 (PWY-6383)
         PWY-5123 (trans, trans-farnesyl diphosphate biosynthesis I)
        geranyl diphosphate + isopentenyl diphosphate  ->  (2E,6E)-farnesyl diphosphate + diphosphate
         In pathways
         PWY-6146 (PWY-6146)
         POLYISOPRENSYN-PWY (polyisoprenoid biosynthesis (E. coli))
         ERGOSTEROL-SYN-PWY (ERGOSTEROL-SYN-PWY)
         PWY66-5 (PWY66-5)
         PWY-5121 (PWY-5121)
         PWY-5910 (PWY-5910)
         PWY2OL-4 (PWY2OL-4)
         PWY-5123 (trans, trans-farnesyl diphosphate biosynthesis I)

- EG10070 (argR) (b3237)
   Products of gene:
     - PD00194 (ArgR)
     - PC00005 (ArgR transcriptional dual regulator)
       Regulatees:
        TU00182 (gltBDF)
        TU0-8472 (argA)
        TU0-1003 (astCADBE)
        TU0-5501 (argG)
        TU0-8161 (artJ)
        TU00240 (artPIQM)
        TU0-14415 (hisJQMP)
        TU00111 (argD)
        TU0-8476 (metY)
        TU341 (metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp)
        TU00109 (carAB)
        TU00007 (argR)
        TU00006 (argI)
        TU00005 (argF)
        TU00226 (argE)
        TU00004 (argCBH)
     - CPLX0-228 (ArgR-L-arginine transcriptional dual regulator)
       Regulatees:
        TU00182 (gltBDF)
        TU0-8472 (argA)
        TU0-1003 (astCADBE)
        TU0-5501 (argG)
        TU0-8161 (artJ)
        TU00240 (artPIQM)
        TU0-14415 (hisJQMP)
        TU00111 (argD)
        TU0-8476 (metY)
        TU341 (metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp)
        TU00109 (carAB)
        TU00007 (argR)
        TU00006 (argI)
        TU00005 (argF)
        TU00226 (argE)
        TU00004 (argCBH)



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ORGANISMS CONTAINING AT LEAST 5 GENES FROM THE GROUP:

Total number of orgs: 308
Effective number of orgs (counting one per cluster within 468 clusters): 205

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317586
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329536
YPES386656 ncbi Yersinia pestis Pestoides F6
YPES377628 ncbi Yersinia pestis Nepal5166
YPES360102 ncbi Yersinia pestis Antiqua6
YPES349746 ncbi Yersinia pestis Angola6
YPES214092 ncbi Yersinia pestis CO926
YPES187410 ncbi Yersinia pestis KIM 106
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80816
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A5
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110185
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103315
XFAS405440 ncbi Xylella fastidiosa M125
XFAS183190 ncbi Xylella fastidiosa Temecula15
XFAS160492 ncbi Xylella fastidiosa 9a5c5
XCAM487884 Xanthomonas campestris pv. paulliniae5
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-105
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80045
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339135
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3065
XAUT78245 ncbi Xanthobacter autotrophicus Py25
VVUL216895 ncbi Vibrio vulnificus CMCP66
VVUL196600 ncbi Vibrio vulnificus YJ0166
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106336
VFIS312309 ncbi Vibrio fischeri ES1146
VEIS391735 ncbi Verminephrobacter eiseniae EF01-25
VCHO345073 ncbi Vibrio cholerae O3956
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169616
TTUR377629 ncbi Teredinibacter turnerae T79015
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB45
TSP1755 Thermoanaerobacter sp.6
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332236
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252595
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen6
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT26
STHE292459 ncbi Symbiobacterium thermophilum IAM 148636
SSUI391296 ncbi Streptococcus suis 98HAH335
SSP94122 ncbi Shewanella sp. ANA-36
SSON300269 ncbi Shigella sonnei Ss0466
SSED425104 ncbi Shewanella sediminis HAW-EB36
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153055
SPYO293653 ncbi Streptococcus pyogenes MGAS50055
SPYO198466 ncbi Streptococcus pyogenes MGAS3155
SPYO186103 ncbi Streptococcus pyogenes MGAS82325
SPYO160490 ncbi Streptococcus pyogenes M1 GAS5
SPRO399741 ncbi Serratia proteamaculans 5686
SPNE488221 ncbi Streptococcus pneumoniae 705855
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-65
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-145
SPNE171101 ncbi Streptococcus pneumoniae R65
SPNE170187 ncbi Streptococcus pneumoniae G545
SPNE1313 Streptococcus pneumoniae5
SPEA398579 ncbi Shewanella pealeana ATCC 7003456
SONE211586 ncbi Shewanella oneidensis MR-15
SMUT210007 ncbi Streptococcus mutans UA1595
SMEL266834 ncbi Sinorhizobium meliloti 10215
SMED366394 ncbi Sinorhizobium medicae WSM4195
SLOI323850 ncbi Shewanella loihica PV-46
SHIGELLA ncbi Shigella flexneri 2a str. 2457T6
SHAL458817 ncbi Shewanella halifaxensis HAW-EB46
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14355
SGOR29390 Streptococcus gordonii Challis5
SGLO343509 ncbi Sodalis glossinidius morsitans6
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB5
SFLE373384 ncbi Shigella flexneri 5 str. 84016
SFLE198214 ncbi Shigella flexneri 2a str. 3016
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122285
SEPI176279 ncbi Staphylococcus epidermidis RP62A5
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4766
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B676
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91506
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT186
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty26
SDYS300267 ncbi Shigella dysenteriae Sd1976
SDEN318161 ncbi Shewanella denitrificans OS2176
SDEG203122 ncbi Saccharophagus degradans 2-405
SBOY300268 ncbi Shigella boydii Sb2276
SBAL402882 ncbi Shewanella baltica OS1856
SBAL399599 ncbi Shewanella baltica OS1956
SAUR93062 ncbi Staphylococcus aureus aureus COL5
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83255
SAUR418127 ncbi Staphylococcus aureus aureus Mu35
SAUR367830 Staphylococcus aureus aureus USA3005
SAUR359787 ncbi Staphylococcus aureus aureus JH15
SAUR359786 ncbi Staphylococcus aureus aureus JH95
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4765
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2525
SAUR273036 ncbi Staphylococcus aureus RF1225
SAUR196620 ncbi Staphylococcus aureus aureus MW25
SAUR158879 ncbi Staphylococcus aureus aureus N3155
SAUR158878 ncbi Staphylococcus aureus aureus Mu505
SALA317655 ncbi Sphingopyxis alaskensis RB22565
SACI56780 ncbi Syntrophus aciditrophicus SB5
RSOL267608 ncbi Ralstonia solanacearum GMI10005
RPAL316057 ncbi Rhodopseudomonas palustris BisB55
RPAL316056 ncbi Rhodopseudomonas palustris BisB185
RPAL316055 ncbi Rhodopseudomonas palustris BisA535
RPAL258594 ncbi Rhodopseudomonas palustris CGA0095
RMET266264 ncbi Ralstonia metallidurans CH345
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38415
RFER338969 ncbi Rhodoferax ferrireducens T1185
REUT381666 ncbi Ralstonia eutropha H165
REUT264198 ncbi Ralstonia eutropha JMP1345
RETL347834 ncbi Rhizobium etli CFN 425
PTHE370438 ncbi Pelotomaculum thermopropionicum SI6
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30005
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a5
PSTU379731 ncbi Pseudomonas stutzeri A15015
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-15
PSP296591 ncbi Polaromonas sp. JS6665
PPUT76869 ncbi Pseudomonas putida GB-15
PPUT351746 ncbi Pseudomonas putida F15
PPUT160488 ncbi Pseudomonas putida KT24405
PPRO298386 ncbi Photobacterium profundum SS96
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257455
PNAP365044 ncbi Polaromonas naphthalenivorans CJ25
PMUL272843 ncbi Pasteurella multocida multocida Pm706
PMEN399739 ncbi Pseudomonas mendocina ymp5
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO16
PING357804 ncbi Psychromonas ingrahamii 376
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1256
PFLU220664 ncbi Pseudomonas fluorescens Pf-55
PFLU216595 ncbi Pseudomonas fluorescens SBW255
PFLU205922 ncbi Pseudomonas fluorescens Pf0-15
PENT384676 ncbi Pseudomonas entomophila L485
PCAR338963 ncbi Pelobacter carbinolicus DSM 23805
PATL342610 ncbi Pseudoalteromonas atlantica T6c6
PAER208964 ncbi Pseudomonas aeruginosa PAO15
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA145
OIHE221109 ncbi Oceanobacillus iheyensis HTE8315
OCAR504832 ncbi Oligotropha carboxidovorans OM55
OANT439375 ncbi Ochrobactrum anthropi ATCC 491885
NWIN323098 ncbi Nitrobacter winogradskyi Nb-2555
NOCE323261 ncbi Nitrosococcus oceani ATCC 197075
NMUL323848 ncbi Nitrosospira multiformis ATCC 251965
NMEN374833 ncbi Neisseria meningitidis 0534425
NMEN272831 ncbi Neisseria meningitidis FAM185
NMEN122587 ncbi Neisseria meningitidis Z24915
NMEN122586 ncbi Neisseria meningitidis MC585
NHAM323097 ncbi Nitrobacter hamburgensis X145
NGON242231 ncbi Neisseria gonorrhoeae FA 10905
NEUT335283 ncbi Nitrosomonas eutropha C915
NEUR228410 ncbi Nitrosomonas europaea ATCC 197185
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124445
MXAN246197 ncbi Myxococcus xanthus DK 16225
MTHE264732 ncbi Moorella thermoacetica ATCC 390736
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E6
MSP409 Methylobacterium sp.5
MSP400668 ncbi Marinomonas sp. MWYL15
MSP266779 ncbi Chelativorans sp. BNC15
MPET420662 ncbi Methylibium petroleiphilum PM15
MMAR394221 ncbi Maricaulis maris MCS105
MLOT266835 ncbi Mesorhizobium loti MAFF3030995
MFLA265072 ncbi Methylobacillus flagellatus KT5
MEXT419610 ncbi Methylobacterium extorquens PA15
MCAP243233 ncbi Methylococcus capsulatus Bath5
MAQU351348 ncbi Marinobacter aquaeolei VT85
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53345
LSPH444177 ncbi Lysinibacillus sphaericus C3-416
LSAK314315 ncbi Lactobacillus sakei sakei 23K5
LPNE400673 ncbi Legionella pneumophila Corby5
LPNE297246 ncbi Legionella pneumophila Paris5
LPNE297245 ncbi Legionella pneumophila Lens5
LPLA220668 ncbi Lactobacillus plantarum WCFS15
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1305
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566015
LINN272626 ncbi Listeria innocua Clip112625
LCHO395495 ncbi Leptothrix cholodnii SP-65
LCAS321967 ncbi Lactobacillus casei ATCC 3345
LBRE387344 ncbi Lactobacillus brevis ATCC 3675
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1975
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5505
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785786
JSP375286 ncbi Janthinobacterium sp. Marseille5
ILOI283942 ncbi Idiomarina loihiensis L2TR6
HSOM228400 ncbi Haemophilus somnus 23366
HSOM205914 ncbi Haemophilus somnus 129PT6
HMOD498761 ncbi Heliobacterium modesticaldum Ice16
HINF71421 ncbi Haemophilus influenzae Rd KW206
HINF374930 ncbi Haemophilus influenzae PittEE6
HINF281310 ncbi Haemophilus influenzae 86-028NP6
HHAL349124 ncbi Halorhodospira halophila SL15
HDUC233412 ncbi Haemophilus ducreyi 35000HP5
HCHE349521 ncbi Hahella chejuensis KCTC 23965
HARS204773 ncbi Herminiimonas arsenicoxydans5
GURA351605 ncbi Geobacter uraniireducens Rf45
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-25
GSUL243231 ncbi Geobacter sulfurreducens PCA5
GMET269799 ncbi Geobacter metallireducens GS-155
GKAU235909 ncbi Geobacillus kaustophilus HTA4266
ESP42895 Enterobacter sp.6
EFER585054 ncbi Escherichia fergusonii ATCC 354696
EFAE226185 ncbi Enterococcus faecalis V5835
ECOO157 ncbi Escherichia coli O157:H7 EDL9336
ECOL83334 Escherichia coli O157:H76
ECOL585397 ncbi Escherichia coli ED1a6
ECOL585057 ncbi Escherichia coli IAI396
ECOL585056 ncbi Escherichia coli UMN0266
ECOL585055 ncbi Escherichia coli 559896
ECOL585035 ncbi Escherichia coli S886
ECOL585034 ncbi Escherichia coli IAI16
ECOL481805 ncbi Escherichia coli ATCC 87396
ECOL469008 ncbi Escherichia coli BL21(DE3)6
ECOL439855 ncbi Escherichia coli SMS-3-56
ECOL413997 ncbi Escherichia coli B str. REL6066
ECOL409438 ncbi Escherichia coli SE116
ECOL364106 ncbi Escherichia coli UTI896
ECOL362663 ncbi Escherichia coli 5366
ECOL331111 ncbi Escherichia coli E24377A5
ECOL316407 ncbi Escherichia coli K-12 substr. W31106
ECOL199310 ncbi Escherichia coli CFT0736
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10436
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough5
DRED349161 ncbi Desulfotomaculum reducens MI-16
DPSY177439 ncbi Desulfotalea psychrophila LSv545
DOLE96561 ncbi Desulfococcus oleovorans Hxd35
DHAF138119 ncbi Desulfitobacterium hafniense Y516
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G205
DARO159087 ncbi Dechloromonas aromatica RCB5
CVIO243365 ncbi Chromobacterium violaceum ATCC 124725
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA5
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)5
CPSY167879 ncbi Colwellia psychrerythraea 34H6
CPER289380 ncbi Clostridium perfringens SM1016
CPER195103 ncbi Clostridium perfringens ATCC 131246
CPER195102 ncbi Clostridium perfringens 136
CNOV386415 ncbi Clostridium novyi NT5
CKLU431943 ncbi Clostridium kluyveri DSM 5556
CJAP155077 Cellvibrio japonicus5
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29016
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C6
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1115
CBUR360115 ncbi Coxiella burnetii RSA 3315
CBUR227377 ncbi Coxiella burnetii RSA 4935
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto6
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6576
CBOT508765 ncbi Clostridium botulinum B str. Eklund 17B5
CBOT498213 ncbi Clostridium botulinum B1 str. Okra6
CBOT441772 ncbi Clostridium botulinum F str. Langeland6
CBOT441771 ncbi Clostridium botulinum A str. Hall6
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193975
CBOT36826 Clostridium botulinum A6
CBEI290402 ncbi Clostridium beijerinckii NCIMB 80526
CAULO ncbi Caulobacter crescentus CB155
CACE272562 ncbi Clostridium acetobutylicum ATCC 8246
BWEI315730 ncbi Bacillus weihenstephanensis KBAB46
BVIE269482 ncbi Burkholderia vietnamiensis G45
BTRI382640 ncbi Bartonella tribocorum CIP 1054765
BTHU412694 ncbi Bacillus thuringiensis Al Hakam6
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-276
BTHA271848 ncbi Burkholderia thailandensis E2645
BSUI470137 ncbi Brucella suis ATCC 234455
BSUI204722 ncbi Brucella suis 13305
BSUB ncbi Bacillus subtilis subtilis 1686
BSP376 Bradyrhizobium sp.5
BSP36773 Burkholderia sp.5
BQUI283165 ncbi Bartonella quintana Toulouse5
BPUM315750 ncbi Bacillus pumilus SAFR-0326
BPSE320373 ncbi Burkholderia pseudomallei 6685
BPSE320372 ncbi Burkholderia pseudomallei 1710b5
BPSE272560 ncbi Burkholderia pseudomallei K962435
BPET94624 Bordetella petrii5
BPER257313 ncbi Bordetella pertussis Tohama I5
BPAR257311 ncbi Bordetella parapertussis 128225
BOVI236 Brucella ovis5
BMEL359391 ncbi Brucella melitensis biovar Abortus 23085
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M5
BMAL320389 ncbi Burkholderia mallei NCTC 102475
BMAL320388 ncbi Burkholderia mallei SAVP15
BMAL243160 ncbi Burkholderia mallei ATCC 233445
BLIC279010 ncbi Bacillus licheniformis ATCC 145806
BJAP224911 ncbi Bradyrhizobium japonicum USDA 1105
BHEN283166 ncbi Bartonella henselae Houston-15
BHAL272558 ncbi Bacillus halodurans C-1256
BCLA66692 ncbi Bacillus clausii KSM-K166
BCER572264 ncbi Bacillus cereus 03BB1026
BCER405917 Bacillus cereus W6
BCER315749 ncbi Bacillus cytotoxicus NVH 391-986
BCER288681 ncbi Bacillus cereus E33L6
BCER226900 ncbi Bacillus cereus ATCC 145796
BCEN331272 ncbi Burkholderia cenocepacia HI24245
BCEN331271 ncbi Burkholderia cenocepacia AU 10545
BCAN483179 ncbi Brucella canis ATCC 233655
BBRO257310 ncbi Bordetella bronchiseptica RB505
BBAC360095 ncbi Bartonella bacilliformis KC5835
BANT592021 ncbi Bacillus anthracis A02486
BANT568206 ncbi Bacillus anthracis CDC 6846
BANT261594 ncbi Bacillus anthracis Ames Ancestor6
BANT260799 ncbi Bacillus anthracis Sterne6
BAMY326423 ncbi Bacillus amyloliquefaciens FZB426
BAMB398577 ncbi Burkholderia ambifaria MC40-65
BAMB339670 ncbi Burkholderia ambifaria AMMD5
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9415
ASP62928 ncbi Azoarcus sp. BH725
ASP232721 ncbi Acidovorax sp. JS425
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4496
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL035
APLE416269 ncbi Actinobacillus pleuropneumoniae L206
AORE350688 ncbi Alkaliphilus oremlandii OhILAs6
AMET293826 ncbi Alkaliphilus metalliredigens QYMF5
AHYD196024 Aeromonas hydrophila dhakensis6
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232705
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-15
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C6
ABOR393595 ncbi Alcanivorax borkumensis SK25
ABAU360910 ncbi Bordetella avium 197N5
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3455
AAVE397945 ncbi Acidovorax citrulli AAC00-15


Names of the homologs of the genes in the group in each of these orgs
  G6237   EG11098   EG11072   EG10666   EG10508   EG10070   
YPSE349747 YPSIP31758_3112YPSIP31758_3110YPSIP31758_1193YPSIP31758_3115YPSIP31758_3111YPSIP31758_3617
YPSE273123 YPTB0939YPTB0941YPTB2834YPTB0936YPTB0940YPTB0459
YPES386656 YPDSF_2812YPDSF_2810YPDSF_2217YPDSF_2816YPDSF_2811YPDSF_3566
YPES377628 YPN_0911YPN_0913YPN_1266YPN_0907YPN_0912YPN_3261
YPES360102 YPA_2671YPA_2669YPA_2313YPA_2675YPA_2670YPA_0067
YPES349746 YPANGOLA_A3074YPANGOLA_A3072YPANGOLA_A0410YPANGOLA_A3165YPANGOLA_A3073YPANGOLA_A3970
YPES214092 YPO3177YPO3175YPO2872YPO3181YPO3176YPO3517
YPES187410 Y1008Y1010Y1361Y1002Y1009Y0667
YENT393305 YE3155YE3153YE1080YE3159YE3154YE0413
XORY360094 XOOORF_2985XOOORF_3660XOOORF_1975XOOORF_1049XOOORF_3661
XORY342109 XOO1900XOO3121XOO2582XOO3630XOO3122
XORY291331 XOO2017XOO3298XOO2737XOO3851XOO3299
XFAS405440 XFASM12_1447XFASM12_1652XFASM12_2085XFASM12_1904XFASM12_1651
XFAS183190 PD_1293PD_1513PD_1901PD_1743PD_1512
XFAS160492 XF2249XF0660XF0755XF0955XF0661
XCAM487884 XCC-B100_1732XCC-B100_1563XCC-B100_1875XCC-B100_3657XCC-B100_1562
XCAM316273 XCAORF_2747XCAORF_2941XCAORF_2575XCAORF_0862XCAORF_2942
XCAM314565 XC_1678XC_1517XC_1812XC_3536XC_1516
XCAM190485 XCC2434XCC2599XCC2303XCC0698XCC2600
XAXO190486 XAC2565XAC2761XAC2410XAC0751XAC2762
XAUT78245 XAUT_4733XAUT_4745XAUT_1413XAUT_4281XAUT_0205
VVUL216895 VV1_0315VV1_0313VV1_0420VV1_0318VV1_0314VV1_0674
VVUL196600 VV0868VV0870VV0774VV0865VV0869VV0466
VPAR223926 VP0686VP0688VP0615VP0683VP0687VP0324
VFIS312309 VF0711VF0713VF0636VF0704VF0712VF0275
VEIS391735 VEIS_3283VEIS_3281VEIS_4890VEIS_4793VEIS_3282
VCHO345073 VC0395_A0412VC0395_A0414VC0395_A0294VC0395_A1857VC0395_A0413VC0395_A2849
VCHO VC0889VC0891VC0766VC2267VC0890VC0431
TTUR377629 TERTU_0564TERTU_3192TERTU_2618TERTU_3700TERTU_3252
TTEN273068 TTE1298TTE1295TTE1294TTE1296TTE1301
TSP1755 TETH514_1540TETH514_1537TETH514_1536TETH514_1534TETH514_1538TETH514_1543
TPSE340099 TETH39_1103TETH39_1100TETH39_1099TETH39_1097TETH39_1101TETH39_1106
TDEN292415 TBD_0879TBD_0881TBD_1511TBD_2192TBD_0880
SWOL335541 SWOL_0582SWOL_0568SWOL_0567SWOL_0564SWOL_0569SWOL_0585
STYP99287 STM0422STM0424STM2512STM0418STM0423STM3360
STHE292459 STH1842STH1845STH1846STH1849STH1844STH1836
SSUI391296 SSU98_1665SSU98_1666SSU98_1824SSU98_1664SSU98_2129
SSP94122 SHEWANA3_2901SHEWANA3_2899SHEWANA3_1234SHEWANA3_1100SHEWANA3_2900SHEWANA3_3510
SSON300269 SSO_0397SSO_0399SSO_2591SSO_0393SSO_0398SSO_3379
SSED425104 SSED_3329SSED_3327SSED_3125SSED_1277SSED_3328SSED_0951
SSAP342451 SSP1232SSP1231SSP1230SSP1233SSP1234
SPYO293653 M5005_SPY1232M5005_SPY1233M5005_SPY1545M5005_SPY1231M5005_SPY1807
SPYO198466 SPYM3_1155SPYM3_1156SPYM3_1572SPYM3_1154SPYM3_1808
SPYO186103 SPYM18_1517SPYM18_1518SPYM18_1884SPYM18_1516SPYM18_2182
SPYO160490 SPY1499SPY1500SPY1818SPY1498SPY2150
SPRO399741 SPRO_1078SPRO_1080SPRO_3597SPRO_1074SPRO_1079SPRO_0468
SPNE488221 SP70585_1256SP70585_1257SP70585_0502SP70585_1255SP70585_2184
SPNE487214 SPH_1324SPH_1325SPH_0539SPH_1323SPH_2265
SPNE487213 SPT_1020SPT_1019SPT_0468SPT_1021SPT_2088
SPNE171101 SPR1088SPR1089SPR0390SPR1087SPR1889
SPNE170187 SPN17011SPN17012SPN06049SPN17009SPN09182
SPNE1313 SPJ_1124SPJ_1125SPJ_0417SPJ_1123SPJ_2099
SPEA398579 SPEA_2991SPEA_2989SPEA_1312SPEA_1166SPEA_2990SPEA_0849
SONE211586 SO_1525SO_3294SO_3465SO_1526SO_0769
SMUT210007 SMU_581SMU_580SMU_1845SMU_582SMU_2093
SMEL266834 SMC00972SMC00970SMC00378SMC01778SMC03884
SMED366394 SMED_0492SMED_0495SMED_3498SMED_0822SMED_3122
SLOI323850 SHEW_2771SHEW_2769SHEW_1296SHEW_1191SHEW_2770SHEW_0866
SHIGELLA DXSXSEBXSEANUSBISPAARGR
SHAL458817 SHAL_3080SHAL_3078SHAL_1375SHAL_1209SHAL_3079SHAL_0902
SHAE279808 SH1393SH1392SH1391SH1394SH1395
SGOR29390 SGO_0694SGO_0693SGO_1861SGO_0695SGO_2057
SGLO343509 SG0656SG0658SG1750SG0653SG0657SG0359
SFUM335543 SFUM_1418SFUM_1416SFUM_1415SFUM_1382SFUM_1417
SFLE373384 SFV_0385SFV_0387SFV_2556SFV_0381SFV_0386SFV_3264
SFLE198214 AAN42015.1AAN42017.1AAN44055.1AAN42011.1AAN42016.1AAN44741.1
SEPI176280 SE_1203SE_1204SE_1205SE_1202SE_1201
SEPI176279 SERP1083SERP1084SERP1085SERP1082SERP1081
SENT454169 SEHA_C0524SEHA_C0526SEHA_C2768SEHA_C0520SEHA_C0525SEHA_C3658
SENT321314 SCH_0463SCH_0465SCH_2510SCH_0459SCH_0464SCH_3298
SENT295319 SPA2301SPA2299SPA0355SPA2305SPA2300SPA3227
SENT220341 STY0461STY0463STY2753STY0457STY0462STY3540
SENT209261 T2441T2439T0345T2445T2440T3275
SDYS300267 SDY_0310SDY_0308SDY_2705SDY_0318SDY_0309SDY_3413
SDEN318161 SDEN_2571SDEN_2569SDEN_1268SDEN_1148SDEN_2570SDEN_0825
SDEG203122 SDE_3381SDE_3220SDE_1458SDE_3454SDE_3221
SBOY300268 SBO_0314SBO_0316SBO_2533SBO_0310SBO_0315SBO_3152
SBAL402882 SHEW185_1343SHEW185_1345SHEW185_3000SHEW185_3154SHEW185_1344SHEW185_3686
SBAL399599 SBAL195_1382SBAL195_1384SBAL195_3143SBAL195_3299SBAL195_1383SBAL195_3810
SAUR93062 SACOL1567SACOL1568SACOL1569SACOL1566SACOL1565
SAUR93061 SAOUHSC_01619SAOUHSC_01620SAOUHSC_01621SAOUHSC_01618SAOUHSC_01617
SAUR418127 SAHV_1510SAHV_1511SAHV_1512SAHV_1509SAHV_1508
SAUR367830 SAUSA300_1471SAUSA300_1472SAUSA300_1473SAUSA300_1470SAUSA300_1469
SAUR359787 SAURJH1_1614SAURJH1_1615SAURJH1_1616SAURJH1_1613SAURJH1_1612
SAUR359786 SAURJH9_1581SAURJH9_1582SAURJH9_1583SAURJH9_1580SAURJH9_1579
SAUR282459 SAS1461SAS1462SAS1463SAS1460SAS1459
SAUR282458 SAR1600SAR1601SAR1602SAR1599SAR1598
SAUR273036 SAB1395CSAB1396CSAB1397CSAB1394CSAB1393C
SAUR196620 MW1475MW1476MW1477MW1474MW1473
SAUR158879 SA1353SA1354SA1355SA1352SA1351
SAUR158878 SAV1522SAV1523SAV1524SAV1521SAV1520
SALA317655 SALA_2354SALA_2195SALA_3105SALA_2025SALA_2194
SACI56780 SYN_02456SYN_02458SYN_02459SYN_02373SYN_02457
RSOL267608 RSC2221RSC2223RSC2527RSC0711RSC2222
RPAL316057 RPD_4305RPD_4304RPD_4105RPD_2676RPD_0313
RPAL316056 RPC_1149RPC_1150RPC_4621RPC_2664RPC_0497
RPAL316055 RPE_1067RPE_1068RPE_4617RPE_2813RPE_0176
RPAL258594 RPA0952RPA0953RPA1161RPA2729RPA0524
RMET266264 RMET_2615RMET_2617RMET_0538RMET_2695RMET_2616
RLEG216596 RL0973RL0976RL0282RL1633RL4628
RFER338969 RFER_2875RFER_2877RFER_3152RFER_2670RFER_2876
REUT381666 H16_A2732H16_A2734H16_A0609H16_A2856H16_A2733
REUT264198 REUT_A0882REUT_A0880REUT_A0596REUT_A0768REUT_A0881
RETL347834 RHE_CH00913RHE_CH00916RHE_CH00276RHE_CH01526RHE_CH04011
PTHE370438 PTH_1196PTH_1193PTH_1182PTH_1179PTH_1194PTH_1200
PSYR223283 PSPTO_0698PSPTO_0700PSPTO_1446PSPTO_0694PSPTO_0699
PSYR205918 PSYR_0604PSYR_0606PSYR_1259PSYR_4458PSYR_0605
PSTU379731 PST_3706PST_3704PST_3010PST_0839PST_3705
PSP312153 PNUC_1704PNUC_1706PNUC_0287PNUC_0264PNUC_1705
PSP296591 BPRO_1747BPRO_1745BPRO_2946BPRO_2887BPRO_1746
PPUT76869 PPUTGB1_0572PPUTGB1_0574PPUTGB1_1025PPUTGB1_0564PPUTGB1_0573
PPUT351746 PPUT_0561PPUT_0563PPUT_1067PPUT_0553PPUT_0562
PPUT160488 PP_0527PP_0529PP_1027PP_0518PP_0528
PPRO298386 PBPRA0805PBPRA0807PBPRA0779PBPRA0801PBPRA0806PBPRA0390
PPEN278197 PEPE_0819PEPE_0818PEPE_0816PEPE_0820PEPE_0671
PNAP365044 PNAP_1501PNAP_1499PNAP_1926PNAP_2919PNAP_1500
PMUL272843 PM0532PM0534PM0168PM0730PM0533PM0549
PMEN399739 PMEN_3844PMEN_3840PMEN_3490PMEN_3853PMEN_3841
PLUM243265 PLU3887PLU3885PLU2714PLU3897PLU3886PLU4548
PING357804 PING_2240PING_2238PING_2951PING_1444PING_2239PING_0295
PHAL326442 PSHAA2366PSHAA2364PSHAA0647PSHAA2370PSHAA2365PSHAA2659
PFLU220664 PFL_5510PFL_5508PFL_4944PFL_5518PFL_5509
PFLU216595 PFLU5462PFLU5460PFLU5048PFLU5469PFLU5461
PFLU205922 PFL_5007PFL_5005PFL_4592PFL_5015PFL_5006
PENT384676 PSEEN0600PSEEN0602PSEEN4397PSEEN0592PSEEN0601
PCAR338963 PCAR_1667PCAR_1669PCAR_1670PCAR_1449PCAR_1668
PATL342610 PATL_1319PATL_1321PATL_3121PATL_1315PATL_1320PATL_0538
PAER208964 PA4044PA4042PA3777PA4052PA4043
PAER208963 PA14_11550PA14_11570PA14_15230PA14_11450PA14_11560
OIHE221109 OB1878OB1879OB1881OB1877OB1875
OCAR504832 OCAR_6895OCAR_6894OCAR_7248OCAR_5865OCAR_4116
OANT439375 OANT_0547OANT_0542OANT_2996OANT_2525OANT_1126
NWIN323098 NWI_0633NWI_0634NWI_2553NWI_1722NWI_0495
NOCE323261 NOC_1743NOC_2036NOC_0612NOC_0803NOC_2037
NMUL323848 NMUL_A0236NMUL_A0234NMUL_A1030NMUL_A0012NMUL_A0235
NMEN374833 NMCC_0354NMCC_1884NMCC_1274NMCC_0640NMCC_1885
NMEN272831 NMC0352NMC0256NMC1298NMC0634NMC0255
NMEN122587 NMA0589NMA2225NMA1575NMA0885NMA2226
NMEN122586 NMB_1867NMB_0262NMB_1363NMB_0683NMB_0261
NHAM323097 NHAM_0778NHAM_0779NHAM_3174NHAM_1819NHAM_0623
NGON242231 NGO0036NGO1734NGO0655NGO0256NGO1735
NEUT335283 NEUT_1501NEUT_1499NEUT_1510NEUT_2518NEUT_1500
NEUR228410 NE1161NE1159NE1172NE2558NE1160
NARO279238 SARO_0161SARO_2254SARO_0171SARO_2921SARO_2253
MXAN246197 MXAN_4646MXAN_4647MXAN_4761MXAN_4644MXAN_5103
MTHE264732 MOTH_1511MOTH_1514MOTH_1515MOTH_1521MOTH_1513MOTH_1508
MSUC221988 MS1059MS1061MS0560MS0975MS1060MS1267
MSP409 M446_6391M446_6392M446_6068M446_6801M446_6645
MSP400668 MMWYL1_1145MMWYL1_1147MMWYL1_4149MMWYL1_4049MMWYL1_1146
MSP266779 MESO_0735MESO_0733MESO_0182MESO_1139MESO_3429
MPET420662 MPE_A2631MPE_A2633MPE_A2482MPE_A2949MPE_A2632
MMAR394221 MMAR10_0849MMAR10_0846MMAR10_0628MMAR10_1531MMAR10_0848
MLOT266835 MLR7474MSR7470MLL6896MLR8411MLR6368
MFLA265072 MFLA_2133MFLA_2131MFLA_1863MFLA_0493MFLA_2132
MEXT419610 MEXT_4309MEXT_4308MEXT_3873MEXT_3161MEXT_2529
MCAP243233 MCA_0817MCA_0819MCA_1818MCA_1654MCA_0818
MAQU351348 MAQU_2438MAQU_2436MAQU_1729MAQU_0846MAQU_2437
LWEL386043 LWE1380LWE1377LWE1376LWE1374LWE1378
LSPH444177 BSPH_3509BSPH_3511BSPH_3512BSPH_3515BSPH_3510BSPH_3507
LSAK314315 LSA0678LSA0677LSA0675LSA0679LSA0681
LPNE400673 LPC_1796LPC_2470LPC_2565LPC_1797LPC_2856
LPNE297246 LPP2277LPP0888LPP0793LPP2278LPP0552
LPNE297245 LPL2249LPL0857LPL0764LPL2250LPL0528
LPLA220668 LP_1601LP_1600LP_1598LP_1602LP_1411
LINT267671 LIC_10863LIC_11590LIC_11591LIC_10404LIC_10283
LINT189518 LA3284LA2357LA2356LA0464LA0326
LINN272626 LIN1402LIN1399LIN1398LIN1396LIN1400
LCHO395495 LCHO_3373LCHO_3371LCHO_2552LCHO_2937LCHO_3372
LCAS321967 LSEI_1637LSEI_1638LSEI_1640LSEI_1636LSEI_1727
LBRE387344 LVIS_0976LVIS_0977LVIS_0979LVIS_0975LVIS_1490
LBOR355277 LBJ_0917LBJ_1273LBJ_1274LBJ_2505LBJ_2397
LBOR355276 LBL_0932LBL_1498LBL_1499LBL_0634LBL_0711
KPNE272620 GKPORF_B4700GKPORF_B4702GKPORF_B2172GKPORF_B4696GKPORF_B4701GKPORF_B2981
JSP375286 MMA_0331MMA_0329MMA_2585MMA_2338MMA_0330
ILOI283942 IL2138IL2136IL2012IL2141IL2137IL0471
HSOM228400 HSM_1383HSM_1381HSM_0347HSM_1300HSM_1382HSM_1540
HSOM205914 HS_0905HS_0903HS_1216HS_0831HS_0904HS_1056
HMOD498761 HM1_0295HM1_0292HM1_0291HM1_0286HM1_0293HM1_0300
HINF71421 HI_1439HI_1437HI_0397HI_1304HI_1438HI_1209
HINF374930 CGSHIEE_04795CGSHIEE_04785CGSHIEE_01010CGSHIEE_05155CGSHIEE_04790CGSHIEE_05990
HINF281310 NTHI1691NTHI1693NTHI0518NTHI1617NTHI1692NTHI1380
HHAL349124 HHAL_0983HHAL_1984HHAL_1683HHAL_0896HHAL_1985
HDUC233412 HD_0441HD_1323HD_0435HD_1322HD_0262
HCHE349521 HCH_05866HCH_05864HCH_04944HCH_05953HCH_05865
HARS204773 HEAR0279HEAR0277HEAR2497HEAR1038HEAR0278
GURA351605 GURA_2175GURA_2177GURA_1890GURA_2179GURA_2176
GTHE420246 GTNG_2322GTNG_2324GTNG_2328GTNG_2323GTNG_2320
GSUL243231 GSU_0686GSU_1766GSU_1767GSU_1692GSU_1765
GMET269799 GMET_2822GMET_1936GMET_1848GMET_1628GMET_1935
GKAU235909 GK2392GK2394GK2395GK2397GK2393GK2390
ESP42895 ENT638_0887ENT638_0889ENT638_3000ENT638_0884ENT638_0888ENT638_3672
EFER585054 EFER_2605EFER_2603EFER_0666EFER_2609EFER_2604EFER_3215
EFAE226185 EF_0980EF_0979EF_0977EF_0981EF_0676
ECOO157 DXSXSEBXSEANUSBISPAARGR
ECOL83334 ECS0474ECS0476ECS3371ECS0469ECS0475ECS4110
ECOL585397 ECED1_0443ECED1_0445ECED1_2933ECED1_0439ECED1_0444ECED1_3887
ECOL585057 ECIAI39_0256ECIAI39_0254ECIAI39_2707ECIAI39_0260ECIAI39_0255ECIAI39_3728
ECOL585056 ECUMN_0459ECUMN_0461ECUMN_2825ECUMN_0454ECUMN_0460ECUMN_3711
ECOL585055 EC55989_0430EC55989_0432EC55989_2794EC55989_0426EC55989_0431EC55989_3650
ECOL585035 ECS88_0415ECS88_0417ECS88_2681ECS88_0411ECS88_0416ECS88_3613
ECOL585034 ECIAI1_0420ECIAI1_0422ECIAI1_2561ECIAI1_0416ECIAI1_0421ECIAI1_3379
ECOL481805 ECOLC_3213ECOLC_3211ECOLC_1168ECOLC_3217ECOLC_3212ECOLC_0469
ECOL469008 ECBD_3241ECBD_3239ECBD_1177ECBD_3245ECBD_3240ECBD_0509
ECOL439855 ECSMS35_0456ECSMS35_0458ECSMS35_2658ECSMS35_0452ECSMS35_0457ECSMS35_3533
ECOL413997 ECB_00368ECB_00370ECB_02401ECB_00364ECB_00369ECB_03097
ECOL409438 ECSE_0442ECSE_0444ECSE_2795ECSE_0438ECSE_0443ECSE_3516
ECOL364106 UTI89_C0443UTI89_C0445UTI89_C2827UTI89_C0439UTI89_C0444UTI89_C3668
ECOL362663 ECP_0479ECP_0481ECP_2511ECP_0475ECP_0480ECP_3321
ECOL331111 ECE24377A_0451ECE24377A_0453ECE24377A_0447ECE24377A_0452ECE24377A_3720
ECOL316407 ECK0414:JW0410:B0420ECK0416:JW0412:B0422ECK2505:JW2493:B2509ECK0410:JW0406:B0416ECK0415:JW0411:B0421ECK3226:JW3206:B3237
ECOL199310 C0531C0533C3028C0527C0532C3992
ECAR218491 ECA1131ECA1133ECA3210ECA1128ECA1132ECA0684
DVUL882 DVU_1350DVU_1348DVU_1346DVU_1197DVU_1349
DRED349161 DRED_1078DRED_1075DRED_1072DRED_1069DRED_1076DRED_1083
DPSY177439 DP2700DP2698DP1945DP1102DP2699
DOLE96561 DOLE_1662DOLE_1664DOLE_1665DOLE_2075DOLE_1663
DHAF138119 DSY2348DSY2352DSY2353DSY2364DSY2351DSY2344
DDES207559 DDE_2200DDE_2202DDE_2204DDE_2438DDE_2201
DARO159087 DARO_3061DARO_3059DARO_3211DARO_3739DARO_3060
CVIO243365 CV_2692CV_2690CV_3564CV_2391CV_2691
CVES412965 COSY_0360COSY_0444COSY_0695COSY_0465COSY_0445
CRUT413404 RMAG_0386RMAG_0481RMAG_0750RMAG_0507RMAG_0482
CPSY167879 CPS_1088CPS_1090CPS_4244CPS_1532CPS_1089CPS_4515
CPER289380 CPR_1787CPR_1789CPR_1790CPR_1792CPR_1788CPR_1784
CPER195103 CPF_2073CPF_2075CPF_2076CPF_2078CPF_2074CPF_2070
CPER195102 CPE1819CPE1821CPE1822CPE1824CPE1820CPE1816
CNOV386415 NT01CX_1983NT01CX_1980NT01CX_1978NT01CX_1982NT01CX_1986
CKLU431943 CKL_1231CKL_1229CKL_1228CKL_1227CKL_1230CKL_1234
CJAP155077 CJA_3336CJA_3334CJA_2105CJA_2693CJA_3335
CHYD246194 CHY_1985CHY_1989CHY_1990CHY_1994CHY_1988CHY_1981
CDES477974 DAUD_1027DAUD_1024DAUD_1021DAUD_1020DAUD_1025DAUD_1030
CBUR434922 COXBU7E912_1610COXBU7E912_1327COXBU7E912_0579COXBU7E912_1339COXBU7E912_1597
CBUR360115 COXBURSA331_A0574COXBURSA331_A1386COXBURSA331_A1578COXBURSA331_A1400COXBURSA331_A0588
CBUR227377 CBU_0468CBU_1243CBU_1417CBU_1255CBU_0480
CBOT536232 CLM_2098CLM_2101CLM_2102CLM_2103CLM_2100CLM_2095
CBOT515621 CLJ_B2068CLJ_B2071CLJ_B2072CLJ_B2073CLJ_B2070CLJ_B2065
CBOT508765 CLL_A2401CLL_A2404CLL_A2406CLL_A2402CLL_A2398
CBOT498213 CLD_2756CLD_2753CLD_2752CLD_2751CLD_2754CLD_2759
CBOT441772 CLI_1945CLI_1948CLI_1949CLI_1950CLI_1947CLI_1942
CBOT441771 CLC_1825CLC_1828CLC_1829CLC_1830CLC_1827CLC_1822
CBOT441770 CLB_1818CLB_1821CLB_1822CLB_1823CLB_1815
CBOT36826 CBO1881CBO1884CBO1885CBO1886CBO1883CBO1878
CBEI290402 CBEI_1706CBEI_1704CBEI_1703CBEI_1701CBEI_1705CBEI_1709
CAULO CC2068CC2070CC2246CC1360CC2069
CACE272562 CAC2077CAC2081CAC2082CAC2084CAC2080CAC2074
BWEI315730 BCERKBAB4_4029BCERKBAB4_4031BCERKBAB4_4032BCERKBAB4_4034BCERKBAB4_4030BCERKBAB4_4027
BVIE269482 BCEP1808_4257BCEP1808_4255BCEP1808_2637BCEP1808_0872BCEP1808_4256
BTRI382640 BT_0649BT_0647BT_1859BT_1313BT_2451
BTHU412694 BALH_3785BALH_3787BALH_3788BALH_3790BALH_3786BALH_3783
BTHU281309 BT9727_3919BT9727_3921BT9727_3922BT9727_3924BT9727_3920BT9727_3917
BTHA271848 BTH_II0614BTH_II0612BTH_I0743BTH_I1529BTH_II0613
BSUI470137 BSUIS_A0462BSUIS_A0457BSUIS_B0756BSUIS_A0804BSUIS_B1253
BSUI204722 BR_0436BR_0431BR_A0764BR_0770BR_1777
BSUB BSU24270BSU24290BSU24300BSU24320BSU24280BSU24250
BSP376 BRADO2161BRADO2164BRADO6092BRADO4425BRADO0555
BSP36773 BCEP18194_B2211BCEP18194_B2213BCEP18194_A5875BCEP18194_A4056BCEP18194_B2212
BQUI283165 BQ03540BQ03530BQ09610BQ05440BQ12170
BPUM315750 BPUM_2159BPUM_2161BPUM_2162BPUM_2164BPUM_2160BPUM_2157
BPSE320373 BURPS668_A2534BURPS668_A2536BURPS668_0929BURPS668_3018BURPS668_A2535
BPSE320372 BURPS1710B_B0989BURPS1710B_B0991BURPS1710B_A1143BURPS1710B_A3361BURPS1710B_B0990
BPSE272560 BPSS1762BPSS1764BPSL0879BPSL2628BPSS1763
BPET94624 BPET3060BPET3062BPET2668BPET3956BPET3061
BPER257313 BP2798BP2800BP2762BP3486BP2799
BPAR257311 BPP2464BPP2462BPP2566BPP0859BPP2463
BOVI236 GBOORF0465GBOORF0460GBOORFA0784GBOORF0796GBOORF1781
BMEL359391 BAB1_0462BAB1_0457BAB2_0475BAB1_0792BAB1_1787
BMEL224914 BMEI1498BMEI1503BMEII0527BMEI1186BMEI0270
BMAL320389 BMA10247_A0364BMA10247_A0362BMA10247_2149BMA10247_2018BMA10247_A0363
BMAL320388 BMASAVP1_1512BMASAVP1_1510BMASAVP1_A0567BMASAVP1_A0762BMASAVP1_1511
BMAL243160 BMA_A0330BMA_A0328BMA_2272BMA_2147BMA_A0329
BLIC279010 BL01523BL01525BL01526BL01528BL01524BL01521
BJAP224911 BLL2651BSL2652BLR7507BLL5028BLR2148
BHEN283166 BH04350BH04340BH12220BH07590BH15260
BHAL272558 BH2779BH2782BH2783BH2785BH2781BH2777
BCLA66692 ABC2462ABC2464ABC2465ABC2466ABC2463ABC2460
BCER572264 BCA_4286BCA_4288BCA_4289BCA_4291BCA_4287BCA_4284
BCER405917 BCE_4249BCE_4252BCE_4253BCE_4255BCE_4251BCE_4247
BCER315749 BCER98_2870BCER98_2872BCER98_2873BCER98_2875BCER98_2871BCER98_0347
BCER288681 BCE33L3930BCE33L3932BCE33L3933BCE33L3935BCE33L3931BCE33L3928
BCER226900 BC_4176BC_4178BC_4179BC_4181BC_4177BC_4174
BCEN331272 BCEN2424_3879BCEN2424_3877BCEN2424_2544BCEN2424_0955BCEN2424_3878
BCEN331271 BCEN_4486BCEN_4488BCEN_1932BCEN_0476BCEN_4487
BCAN483179 BCAN_A0440BCAN_A0435BCAN_B0773BCAN_A0783BCAN_A1815
BBRO257310 BB1912BB1910BB2011BB0953BB1911
BBAC360095 BARBAKC583_0400BARBAKC583_0399BARBAKC583_1034BARBAKC583_0634BARBAKC583_0120
BANT592021 BAA_4418BAA_4420BAA_4421BAA_4423BAA_4419BAA_4416
BANT568206 BAMEG_4436BAMEG_4438BAMEG_4439BAMEG_4441BAMEG_4437BAMEG_4434
BANT261594 GBAA4400GBAA4403GBAA4404GBAA4406GBAA4402GBAA4398
BANT260799 BAS4081BAS4083BAS4084BAS4086BAS4082BAS4079
BAMY326423 RBAM_022600RBAM_022620RBAM_022630RBAM_022650RBAM_022610RBAM_022580
BAMB398577 BAMMC406_3776BAMMC406_3774BAMMC406_2462BAMMC406_0825BAMMC406_3775
BAMB339670 BAMB_3250BAMB_3248BAMB_2592BAMB_0816BAMB_3249
BABO262698 BRUAB1_0458BRUAB1_0453BRUAB2_0468BRUAB1_0786BRUAB1_1760
ASP62928 AZO1198AZO1200AZO1467AZO0317AZO1199
ASP232721 AJS_1038AJS_1036AJS_2302AJS_2768AJS_1037
ASAL382245 ASA_0990ASA_0992ASA_1863ASA_0983ASA_0991ASA_0654
APLE434271 APJL_0208APJL_0812APJL_0202APJL_0813APJL_1308
APLE416269 APL_0207APL_0806APL_0817APL_0201APL_0807APL_1295
AORE350688 CLOS_1607CLOS_1610CLOS_1611CLOS_1613CLOS_1609CLOS_1605
AMET293826 AMET_2508AMET_2504AMET_2503AMET_2505AMET_2510
AHYD196024 AHA_3321AHA_3319AHA_1983AHA_3328AHA_3320AHA_0654
AFER243159 AFE_1118AFE_1116AFE_1112AFE_2727AFE_1117
AEHR187272 MLG_1381MLG_0946MLG_0693MLG_0379MLG_0945
ADEH290397 ADEH_1097ADEH_1094ADEH_1093ADEH_2738ADEH_1096ADEH_0586
ABOR393595 ABO_2166ABO_2164ABO_1852ABO_2170ABO_2165
ABAU360910 BAV2177BAV2179BAV2097BAV0571BAV2178
ABAC204669 ACID345_3427ACID345_0279ACID345_1215ACID345_3432ACID345_4162
AAVE397945 AAVE_2015AAVE_2013AAVE_2567AAVE_2230AAVE_2014


Organism features enriched in list (features available for 292 out of the 308 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Clusters 0.00482491417
Arrangment:Pairs 1.781e-678112
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00045211111
Endospores:No 2.834e-972211
Endospores:Yes 8.659e-74353
GC_Content_Range4:0-40 7.754e-779213
GC_Content_Range4:40-60 0.0000180136224
GC_Content_Range7:0-30 0.00022661247
GC_Content_Range7:30-40 0.000908367166
GC_Content_Range7:50-60 2.358e-777107
GC_Content_Range7:70-100 0.0049736111
Genome_Size_Range5:0-2 1.143e-3217155
Genome_Size_Range5:4-6 1.745e-17139184
Genome_Size_Range9:0-1 1.124e-7127
Genome_Size_Range9:1-2 9.493e-2416128
Genome_Size_Range9:3-4 0.00375064977
Genome_Size_Range9:4-5 1.311e-66996
Genome_Size_Range9:5-6 6.139e-107088
Genome_Size_Range9:6-8 0.00368762738
Gram_Stain:Gram_Neg 1.765e-7197333
Habitat:Multiple 0.0007270106178
Habitat:Specialized 0.00014821453
Habitat:Terrestrial 0.00316472331
Motility:No 2.680e-847151
Motility:Yes 2.011e-9169267
Optimal_temp.:25-30 0.00688561519
Optimal_temp.:35-37 0.00010891313
Optimal_temp.:37 0.008226843106
Oxygen_Req:Anaerobic 0.000768737102
Oxygen_Req:Facultative 1.018e-11139201
Pathogenic_in:Animal 0.00354264366
Pathogenic_in:Human 0.0013388123213
Pathogenic_in:No 0.000568095226
Shape:Coccobacillus 0.00513231011
Shape:Rod 4.636e-13216347
Shape:Sphere 0.0002646219
Shape:Spiral 0.0000499634
Temp._range:Hyperthermophilic 0.0000216223
Temp._range:Mesophilic 8.984e-6257473
Temp._range:Thermophilic 0.0004912835



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 115
Effective number of orgs (counting one per cluster within 468 clusters): 101

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/270
TWHI203267 ncbi Tropheryma whipplei Twist0
TVOL273116 ncbi Thermoplasma volcanium GSS10
TPEN368408 ncbi Thermofilum pendens Hrk 50
TKOD69014 ncbi Thermococcus kodakarensis KOD10
TACI273075 ncbi Thermoplasma acidophilum DSM 17280
STOK273063 ncbi Sulfolobus tokodaii 70
SSOL273057 ncbi Sulfolobus solfataricus P20
SMAR399550 ncbi Staphylothermus marinus F10
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6390
RTYP257363 ncbi Rickettsia typhi Wilmington1
RRIC452659 ncbi Rickettsia rickettsii Iowa1
RRIC392021 ncbi Rickettsia rickettsii Sheila Smith1
RPRO272947 ncbi Rickettsia prowazekii Madrid E1
RMAS416276 ncbi Rickettsia massiliae MTU51
RFEL315456 ncbi Rickettsia felis URRWXCal21
RCON272944 ncbi Rickettsia conorii Malish 71
RBEL391896 ncbi Rickettsia bellii OSU 85-3891
RBEL336407 ncbi Rickettsia bellii RML369-C1
RAKA293614 ncbi Rickettsia akari Hartford1
PTOR263820 ncbi Picrophilus torridus DSM 97900
PMOB403833 ncbi Petrotoga mobilis SJ951
PISL384616 ncbi Pyrobaculum islandicum DSM 41840
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W831
PFUR186497 ncbi Pyrococcus furiosus DSM 36380
PAST100379 Onion yellows phytoplasma0
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135140
PAER178306 ncbi Pyrobaculum aerophilum IM20
PABY272844 ncbi Pyrococcus abyssi GE50
NSP35761 Nocardioides sp.1
NSEN222891 ncbi Neorickettsia sennetsu Miyayama0
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H0
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30910
MSED399549 ncbi Metallosphaera sedula DSM 53480
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG11
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C61
MMAR368407 ncbi Methanoculleus marisnigri JR11
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273431
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I0
HWAL362976 ncbi Haloquadratum walsbyi DSM 167900
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HPYL85963 ncbi Helicobacter pylori J991
HPYL357544 ncbi Helicobacter pylori HPAG11
HPY ncbi Helicobacter pylori 266951
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54560
GFOR411154 ncbi Gramella forsetii KT08030
FMAG334413 ncbi Finegoldia magna ATCC 293281
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
ERUM254945 ncbi Ehrlichia ruminantium Welgevonden1
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake1
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1670
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334061
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131291
CABO218497 ncbi Chlamydophila abortus S26/31
BTUR314724 ncbi Borrelia turicatae 91E1351
BLON206672 ncbi Bifidobacterium longum NCC27051
BHER314723 ncbi Borrelia hermsii DAH1
BGAR290434 ncbi Borrelia garinii PBi0
BBUR224326 ncbi Borrelia burgdorferi B311
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BAFZ390236 ncbi Borrelia afzelii PKo0
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB0
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
ASP1667 Arthrobacter sp.1
APHA212042 ncbi Anaplasma phagocytophilum HZ1
APER272557 ncbi Aeropyrum pernix K10
ANAE240017 Actinomyces oris MG11
AMAR234826 ncbi Anaplasma marginale St. Maries0
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43040
AAUR290340 ncbi Arthrobacter aurescens TC11
AAEO224324 ncbi Aquifex aeolicus VF51


Names of the homologs of the genes in the group in each of these orgs
  G6237   EG11098   EG11072   EG10666   EG10508   EG10070   
WPIP955 WD_0453
WPIP80849 WB_1143
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496
TWHI203267
TVOL273116
TPEN368408
TKOD69014
TACI273075
STOK273063
SSOL273057
SMAR399550
SACI330779
RTYP257363 RT0339
RRIC452659 RRIOWA_0567
RRIC392021 A1G_02690
RPRO272947 RP350
RMAS416276 RMA_0491
RFEL315456 RF_0557
RCON272944 RC0475
RBEL391896 A1I_04940
RBEL336407 RBE_0766
RAKA293614 A1C_02625
PTOR263820
PMOB403833 PMOB_1002
PISL384616
PHOR70601
PGIN242619 PG_2217
PFUR186497
PAST100379
PARS340102
PAER178306
PABY272844
NSP35761 NOCA_2473
NSEN222891
NPHA348780
MTHE187420
MSYN262723
MSTA339860
MSED399549
MPUL272635
MPNE272634
MPEN272633
MMYC272632 MSC_0101
MMOB267748
MMAZ192952
MMAR444158 MMARC6_0154
MMAR368407 MEMAR_1979
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047 MCAP_0057
MBAR269797
MART243272
MAEO419665
MACE188937
LXYL281090 LXX11010
IHOS453591
HWAL362976
HSP64091
HSAL478009
HPYL85963 JHP0001
HPYL357544 HPAG1_0001
HPY HP0001
HMUK485914
HMAR272569
HBUT415426
GFOR411154
FMAG334413 FMG_0842
FJOH376686
ERUM302409 ERGA_CDS_00240
ERUM254945 ERWE_CDS_00240
ECHA205920 ECH_0056
ECAN269484 ECAJ_0029
CTRA471473 CTLON_0579
CTRA471472 CTL0583
CSUL444179
CMUR243161 TC_0605
CMIC443906 CMM_1792
CMIC31964 CMS2040
CMET456442
CMAQ397948
CKOR374847
CHUT269798 CHU_3643
CGLU196627 CG1585
CEFF196164 CE1531
CDIP257309 DIP1172
CABO218497 CAB304
BTUR314724 BT0107
BLON206672 BL1059
BHER314723 BH0107
BGAR290434
BBUR224326 BB_0107
BAPH372461 BCC_285
BAFZ390236
AYEL322098
AURANTIMONAS
ASP1667 ARTH_1501
APHA212042 APH_0079
APER272557
ANAE240017 ANA_2689
AMAR234826
ALAI441768 ACL_0476
AFUL224325
AAUR290340 AAUR_1636
AAEO224324 AQ_881


Organism features enriched in list (features available for 106 out of the 115 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.0000232492
Arrangment:Pairs 0.007328012112
Disease:Rocky_Mountain_Spotted_Fever 0.005871733
Endospores:No 4.157e-863211
GC_Content_Range4:0-40 0.000028557213
GC_Content_Range4:60-100 0.000250913145
GC_Content_Range7:0-30 1.582e-92647
GC_Content_Range7:50-60 0.006242111107
GC_Content_Range7:60-70 0.000167611134
Genome_Size_Range5:0-2 1.036e-2271155
Genome_Size_Range5:4-6 1.742e-126184
Genome_Size_Range5:6-10 0.0005978147
Genome_Size_Range9:0-1 2.642e-132227
Genome_Size_Range9:1-2 3.007e-1049128
Genome_Size_Range9:4-5 0.0000108496
Genome_Size_Range9:5-6 1.155e-6288
Genome_Size_Range9:6-8 0.0033705138
Gram_Stain:Gram_Neg 0.000629446333
Gram_Stain:Gram_Pos 3.477e-610150
Habitat:Host-associated 0.001846250206
Habitat:Multiple 1.078e-613178
Habitat:Specialized 0.00001922253
Motility:Yes 0.006463038267
Optimal_temp.:- 0.005782636257
Optimal_temp.:100 0.005871733
Optimal_temp.:85 0.001042744
Oxygen_Req:Anaerobic 0.000870430102
Oxygen_Req:Facultative 0.000320322201
Pathogenic_in:Ruminant 0.005871733
Salinity:Extreme_halophilic 0.002626257
Shape:Irregular_coccus 0.00001911117
Shape:Pleomorphic 0.000614068
Shape:Rod 9.942e-937347
Shape:Sphere 3.073e-101619
Temp._range:Hyperthermophilic 1.914e-101823
Temp._range:Mesophilic 2.052e-668473



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951650.4749
THISYN-PWY (thiamin biosynthesis I)5023050.4611
GLYCOCAT-PWY (glycogen degradation I)2461910.4557
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181710.4256
CENTFERM-PWY (acetyl-CoA fermentation to butyrate I)2081650.4232
PWY-5386 (methylglyoxal degradation I)3052150.4124
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491280.4090
PWY-6196 (serine racemization)102970.4041
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2862040.4033



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG11098   EG11072   EG10666   EG10508   EG10070   
G62370.9999450.9991370.9994330.9999390.998919
EG110980.9997070.9995250.9999830.998944
EG110720.9991530.9994860.998874
EG106660.9995010.998751
EG105080.999046
EG10070



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PAIRWISE BLAST SCORES:

  G6237   EG11098   EG11072   EG10666   EG10508   EG10070   
G62370.0f0-----
EG11098-0.0f0----
EG11072--0.0f0---
EG10666---0.0f0--
EG10508----0.0f0-
EG10070-----0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.

- CPLX-3946 (exonuclease VII) (degree of match pw to cand: 1.000, degree of match cand to pw: 0.333, average score: 1.000)
  Genes in pathway or complex:
   *in cand* 0.9997 0.9989 EG11098 (xseB) EG11098-MONOMER (exonuclease VII, small subunit)
   *in cand* 0.9994 0.9989 EG11072 (xseA) EG11072-MONOMER (exonuclease VII, large subunit)
  Genes in candidate but not in this pathway or complex:
   *in cand* 0.9991 0.9988 EG10070 (argR) PD00194 (ArgR)
   *in cand* 0.9997 0.9990 EG10508 (ispA) FPPSYN-MONOMER (geranyl diphosphate synthase / farnesyl diphosphate synthase)
   *in cand* 0.9994 0.9988 EG10666 (nusB) EG10666-MONOMER (transcription antitermination protein NusB)
   *in cand* 0.9996 0.9989 G6237 (dxs) DXS-MONOMER (Dxs)



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10508 EG11098 G6237 (centered at EG10508)
EG11072 (centered at EG11072)
EG10666 (centered at EG10666)
EG10070 (centered at EG10070)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  G6237   EG11098   EG11072   EG10666   EG10508   EG10070   
400/623401/623420/623415/623407/623258/623
AAEO224324:0:Tyes0-----
AAUR290340:2:Tyes-----0
AAVE397945:0:Tyes205432111-
ABAC204669:0:Tyes-3172094531773917
ABAU360910:0:Tyes16081610152601609-
ABOR393595:0:Tyes3163140320315-
ABUT367737:0:Tyes1710-01418--
ACAU438753:0:Tyes7327370-2098-
ACEL351607:0:Tyes-618---0
ACRY349163:8:Tyes6421134-0-
ADEH290397:0:Tyes51451151021755130
AEHR187272:0:Tyes9965663130565-
AFER243159:0:Tyes64015935-
AHYD196024:0:Tyes259925971302260625980
ALAI441768:0:Tyes--0---
AMAR329726:9:Tyes1829-0-1501-
AMET293826:0:Tyes510-27
ANAE240017:0:Tyes-0----
AORE350688:0:Tyes256840
APHA212042:0:Tyes-0----
APLE416269:0:Tyes660561706061100
APLE434271:0:Tno6579-05801086
ASAL382245:5:Tyes32833011673213290
ASP1667:3:Tyes-----0
ASP232721:2:Tyes20121416701-
ASP62928:0:Tyes90490611810905-
ASP62977:0:Tyes266--5550-
ASP76114:2:Tyes511-8870512-
AVAR240292:3:Tyes42840--2451-
BABO262698:0:Tno--0---
BABO262698:1:Tno50-3101259-
BAMB339670:2:Tno20--1-
BAMB339670:3:Tno--18260--
BAMB398577:2:Tno20--1-
BAMB398577:3:Tno--16670--
BAMY326423:0:Tyes245730
BANT260799:0:Tno245730
BANT261594:2:Tno245730
BANT568206:2:Tyes245730
BANT592021:2:Tno245730
BAPH198804:0:Tyes1--02-
BAPH372461:0:Tyes---0--
BBAC264462:0:Tyes-108272-
BBAC360095:0:Tyes2622618544810-
BBRO257310:0:Tyes97497210770973-
BBUR224326:21:Fno---0--
BCAN483179:0:Tno--0---
BCAN483179:1:Tno50-3381332-
BCEN331271:1:Tno02--1-
BCEN331271:2:Tno--14810--
BCEN331272:2:Tyes20--1-
BCEN331272:3:Tyes--15860--
BCER226900:1:Tyes245730
BCER288681:0:Tno245730
BCER315749:1:Tyes239824002401240323990
BCER405917:1:Tyes245730
BCER572264:1:Tno245730
BCIC186490:0:Tyes1--3080-
BCLA66692:0:Tyes245630
BFRA272559:1:Tyes300----0
BFRA295405:0:Tno346----0
BHAL272558:0:Tyes256840
BHEN283166:0:Tyes10731307994-
BHER314723:0:Fyes---0--
BJAP224911:0:Fyes506507539028950-
BLIC279010:0:Tyes245730
BLON206672:0:Tyes-----0
BMAL243160:0:Tno20--1-
BMAL243160:1:Tno--1130--
BMAL320388:0:Tno20--1-
BMAL320388:1:Tno--0194--
BMAL320389:0:Tyes20--1-
BMAL320389:1:Tyes--1300--
BMEL224914:0:Tno--0---
BMEL224914:1:Tno12581263-9430-
BMEL359391:0:Tno--0---
BMEL359391:1:Tno50-3081217-
BOVI236:0:Tyes--0---
BOVI236:1:Tyes40-2941141-
BPAR257311:0:Tno15361534163901535-
BPER257313:0:Tyes3234065433-
BPET94624:0:Tyes39940101319400-
BPSE272560:0:Tyes02--1-
BPSE272560:1:Tyes--01764--
BPSE320372:0:Tno02--1-
BPSE320372:1:Tno--02098--
BPSE320373:0:Tno02--1-
BPSE320373:1:Tno--02001--
BPUM315750:0:Tyes245730
BQUI283165:0:Tyes10544172748-
BSP107806:2:Tyes1--02-
BSP36773:1:Tyes02--1-
BSP36773:2:Tyes--18600--
BSP376:0:Tyes15241525527036840-
BSUB:0:Tyes245730
BSUI204722:0:Tyes--0---
BSUI204722:1:Tyes50-3291305-
BSUI470137:0:Tno--0-475-
BSUI470137:1:Tno50-334--
BTHA271848:0:Tno20--1-
BTHA271848:1:Tno--0776--
BTHE226186:0:Tyes347----0
BTHU281309:1:Tno245730
BTHU412694:1:Tno245730
BTRI382640:1:Tyes1010545951352-
BTUR314724:0:Fyes---0--
BVIE269482:6:Tyes20--1-
BVIE269482:7:Tyes--17450--
BWEI315730:4:Tyes245730
BXEN266265:1:Tyes20--1-
CABO218497:0:Tyes--0---
CACE272562:1:Tyes3781060
CAULO:0:Tyes7177198980718-
CBEI290402:0:Tyes532048
CBLO203907:0:Tyes2--0--
CBLO291272:0:Tno2--03-
CBOT36826:1:Tno367850
CBOT441770:0:Tyes3567-0
CBOT441771:0:Tno367850
CBOT441772:1:Tno367850
CBOT498213:1:Tno367850
CBOT508765:1:Tyes3-6840
CBOT515621:2:Tyes367850
CBOT536232:0:Tno367850
CBUR227377:1:Tyes-073890174912
CBUR360115:1:Tno-075193476515
CBUR434922:2:Tno-9877110723973
CCAV227941:1:Tyes--0--232
CCHL340177:0:Tyes--099-458
CCON360104:2:Tyes252-2560--
CCUR360105:0:Tyes1197-11930--
CDES477974:0:Tyes7410510
CDIF272563:1:Tyes4-0-2-
CDIP257309:0:Tyes-----0
CEFF196164:0:Fyes-----0
CFEL264202:1:Tyes--237--0
CFET360106:0:Tyes190--12290-
CGLU196627:0:Tyes-----0
CHOM360107:1:Tyes1243-12390--
CHUT269798:0:Tyes0-----
CHYD246194:0:Tyes4891370
CJAP155077:0:Tyes1222122005841221-
CJEI306537:0:Tyes---188-0
CJEJ192222:0:Tyes0-460--
CJEJ195099:0:Tno0-465--
CJEJ354242:2:Tyes0-461--
CJEJ360109:0:Tyes66-580--
CJEJ407148:0:Tno0-459--
CKLU431943:1:Tyes421037
CMIC31964:2:Tyes---0--
CMIC443906:2:Tyes---0--
CMUR243161:1:Tyes--0---
CNOV386415:0:Tyes5-2048
CPEL335992:0:Tyes1---0-
CPER195102:1:Tyes356840
CPER195103:0:Tno356840
CPER289380:3:Tyes356840
CPHY357809:0:Tyes3-6-40
CPNE115711:1:Tyes--211--0
CPNE115713:0:Tno--888--0
CPNE138677:0:Tno--896--0
CPNE182082:0:Tno--938--0
CPRO264201:0:Fyes012-1098-
CPSY167879:0:Tyes02306344213332
CRUT413404:0:Tyes08933511390-
CSAL290398:0:Tyes-063425361-
CSP501479:6:Fyes20--1-
CSP501479:8:Fyes--0---
CSP78:2:Tyes2109-018352110-
CTEP194439:0:Tyes0--1351-767
CTET212717:0:Tyes0-352-
CTRA471472:0:Tyes--0---
CTRA471473:0:Tno--0---
CVES412965:0:Tyes0783229979-
CVIO243365:0:Tyes30430212120303-
DARO159087:0:Tyes201526831-
DDES207559:0:Tyes0242441-
DETH243164:0:Tyes0--509--
DGEO319795:1:Tyes0----1314
DHAF138119:0:Tyes4892070
DNOD246195:0:Tyes---0177-
DOLE96561:0:Tyes0234191-
DPSY177439:2:Tyes1642164087201641-
DRAD243230:3:Tyes723----0
DRED349161:0:Tyes9630714
DSHI398580:5:Tyes8015710-570-
DSP216389:0:Tyes0--431--
DSP255470:0:Tno0--424--
DVUL882:1:Tyes1531511490152-
ECAN269484:0:Tyes--0---
ECAR218491:0:Tyes45445625464514550
ECHA205920:0:Tyes--0---
ECOL199310:0:Tno462448053396
ECOL316407:0:Tno462107052822
ECOL331111:6:Tno46-053141
ECOL362663:0:Tno462030052845
ECOL364106:1:Tno462387053225
ECOL405955:2:Tyes0-2099-12899
ECOL409438:6:Tyes462396053134
ECOL413997:0:Tno462039052747
ECOL439855:4:Tno462152052987
ECOL469008:0:Tno27172715681272127160
ECOL481805:0:Tno27542752710275827530
ECOL585034:0:Tno462131052940
ECOL585035:0:Tno462192053100
ECOL585055:0:Tno462349053197
ECOL585056:2:Tno572386063270
ECOL585057:0:Tno202440613489
ECOL585397:0:Tno462425053364
ECOL83334:0:Tno572965063726
ECOLI:0:Tno462146052883
ECOO157:0:Tno572975063741
EFAE226185:3:Tyes-2902892872910
EFER585054:1:Tyes192619240193019252545
ELIT314225:0:Tyes140601445-1-
ERUM254945:0:Tyes--0---
ERUM302409:0:Tno--0---
ESP42895:1:Tyes352134042813
FALN326424:0:Tyes03969---3053
FMAG334413:1:Tyes--0---
FNOD381764:0:Tyes1447--0--
FNUC190304:0:Tyes--0-261-
FPHI484022:1:Tyes1205--7756770
FRANT:0:Tno0--381511-
FSP106370:0:Tyes02544---1835
FSP1855:0:Tyes3378----0
FSUC59374:0:Tyes1--11370-
FTUL351581:0:Tno453--810-
FTUL393011:0:Tno414--770-
FTUL393115:0:Tyes0--368495-
FTUL401614:0:Tyes0--484569-
FTUL418136:0:Tno490--820-
FTUL458234:0:Tno432--790-
GBET391165:0:Tyes21850--1-
GKAU235909:1:Tyes245730
GMET269799:1:Tyes11963172210316-
GOXY290633:5:Tyes201468-1-
GSUL243231:0:Tyes01074107510011073-
GTHE420246:1:Tyes24-630
GURA351605:0:Tyes2902920294291-
GVIO251221:0:Tyes0---222-
HACI382638:1:Tyes655--0--
HARS204773:0:Tyes2020907091-
HAUR316274:2:Tyes-04750740--
HCHE349521:0:Tyes8958930985894-
HDUC233412:0:Tyes171931-1669300
HHAL349124:0:Tyes87109278501093-
HHEP235279:0:Tyes589-17310--
HINF281310:0:Tyes1055105709901056776
HINF374930:0:Tyes6576550723656857
HINF71421:0:Tno1026102408881025799
HMOD498761:0:Tyes5891470
HNEP81032:0:Tyes8989000-899-
HPY:0:Tno---0--
HPYL357544:1:Tyes---0--
HPYL85963:0:Tno---0--
HSOM205914:1:Tyes7472387073227
HSOM228400:0:Tno10461044096510451207
ILOI283942:0:Tyes170717051580171017060
JSP290400:1:Tyes8213248-0-
JSP375286:0:Tyes20229220421-
KPNE272620:2:Tyes24602462024562461793
KRAD266940:2:Fyes---156-0
LACI272621:0:Tyes-01---
LBIF355278:2:Tyes241417081707-0-
LBIF456481:2:Tno249117601759-0-
LBOR355276:1:Tyes267763764065-
LBOR355277:1:Tno030230314021314-
LBRE387344:2:Tyes-1240479
LCAS321967:1:Tyes-124091
LCHO395495:0:Tyes8218190389820-
LDEL321956:0:Tyes-01---
LDEL390333:0:Tyes-01---
LGAS324831:0:Tyes-10---
LHEL405566:0:Tyes-01---
LINN272626:1:Tno63204-
LINT189518:1:Tyes2980204520441390-
LINT267671:1:Tno574129112921180-
LINT363253:3:Tyes254--0253-
LJOH257314:0:Tyes-013--
LLAC272622:5:Tyes-10-41324
LLAC272623:0:Tyes-10-31185
LMES203120:1:Tyes-3416-0
LMON169963:0:Tno-3204-
LMON265669:0:Tyes-3204-
LPLA220668:0:Tyes-1631621601640
LPNE272624:0:Tno-16009901601-
LPNE297245:1:Fno-172333023917240
LPNE297246:1:Fyes-173133424017320
LPNE400673:0:Tno-066475511039
LREU557436:0:Tyes-1240-
LSAK314315:0:Tyes-32046
LSPH444177:1:Tyes245830
LWEL386043:0:Tyes63204-
LXYL281090:0:Tyes---0--
MABS561007:1:Tyes652--495-0
MAER449447:0:Tyes4856---0-
MAQU351348:2:Tyes1571156987101570-
MAVI243243:0:Tyes458--295-0
MBOV233413:0:Tno1030--887-0
MBOV410289:0:Tno1008--864-0
MBUR259564:0:Tyes-01---
MCAP243233:0:Tyes029417821-
MCAP340047:0:Tyes--0---
MEXT419610:0:Tyes1770176913336320-
MFLA265072:0:Tyes16371635136701636-
MGIL350054:3:Tyes401--226-0
MLEP272631:0:Tyes---0-574
MLOT266835:2:Tyes89589242216270-
MMAG342108:0:Tyes269226900-2691-
MMAR267377:0:Tyes-01---
MMAR368407:0:Tyes--0---
MMAR394221:0:Tyes2212180902220-
MMAR402880:1:Tyes-10---
MMAR426368:0:Tyes-01---
MMAR444158:0:Tyes--0---
MMYC272632:0:Tyes--0---
MPET420662:1:Tyes1491510466150-
MSME246196:0:Tyes0--256-985
MSP164756:1:Tno0--155-765
MSP164757:0:Tno0--205-786
MSP189918:2:Tyes0--156-761
MSP266779:3:Tyes55154909623263-
MSP400668:0:Tyes02306029571-
MSP409:2:Tyes3183190715566-
MSUC221988:0:Tyes5155170431516724
MTBCDC:0:Tno1121--964-0
MTBRV:0:Tno1039--886-0
MTHE264732:0:Tyes3671350
MTHE349307:0:Tyes-0136---
MTUB336982:0:Tno1006--862-0
MTUB419947:0:Tyes1085--929-0
MVAN350058:0:Tyes-1971-0-653
MXAN246197:0:Tyes-231120442
NARO279238:0:Tyes021211128032120-
NEUR228410:0:Tyes201314201-
NEUT335283:2:Tyes20119941-
NFAR247156:2:Tyes---1698-0
NGON242231:0:Tyes015505772021551-
NHAM323097:2:Tyes149150243611360-
NMEN122586:0:Tno1545110624080-
NMEN122587:0:Tyes015609062781561-
NMEN272831:0:Tno8819273470-
NMEN374833:0:Tno015069062791507-
NMUL323848:3:Tyes22322110120222-
NOCE323261:1:Tyes1101138601851387-
NSP103690:6:Tyes39015681569-0-
NSP35761:1:Tyes-----0
NSP387092:0:Tyes--0948--
NWIN323098:0:Tyes142143207912380-
OANT439375:4:Tyes--0---
OANT439375:5:Tyes50-2020588-
OCAR504832:0:Tyes27782777312917510-
OIHE221109:0:Tyes-34620
OTSU357244:0:Fyes-0461---
PACN267747:0:Tyes-0---18
PAER208963:0:Tyes81029009-
PAER208964:0:Tno2682660276267-
PARC259536:0:Tyes0--18641725-
PATL342610:0:Tyes78578726097817860
PCAR338963:0:Tyes2232252260224-
PCRY335284:1:Tyes0--21411976-
PDIS435591:0:Tyes2579----0
PENT384676:0:Tyes810357609-
PFLU205922:0:Tyes4254230433424-
PFLU216595:1:Tyes4064040413405-
PFLU220664:0:Tyes5495470557548-
PGIN242619:0:Tyes0-----
PHAL326442:1:Tyes175617540176017552050
PING357804:0:Tyes182418222496110418230
PINT246198:1:Tyes0----240
PLUM243265:0:Fyes117411720118411731848
PLUT319225:0:Tyes110-01305-679
PMAR146891:0:Tyes0---221-
PMAR167539:0:Tyes0---204-
PMAR167540:0:Tyes0---163-
PMAR167542:0:Tyes0---174-
PMAR167546:0:Tyes0---227-
PMAR167555:0:Tyes0---548-
PMAR59920:0:Tno0---386-
PMAR74546:0:Tyes0---190-
PMAR74547:0:Tyes0---427-
PMAR93060:0:Tyes0---222-
PMEN399739:0:Tyes3563520365353-
PMOB403833:0:Tyes---0--
PMUL272843:1:Tyes3643660562365381
PNAP365044:8:Tyes2043414251-
PPEN278197:0:Tyes-1471461441480
PPRO298386:2:Tyes4154173894114160
PPUT160488:0:Tno911508010-
PPUT351746:0:Tyes81052009-
PPUT76869:0:Tno81047409-
PRUM264731:0:Tyes677----0
PSP117:0:Tyes0-83814421-
PSP296591:2:Tyes20119711391-
PSP312153:0:Tyes146014622301461-
PSP56811:2:Tyes---2050-
PSTU379731:0:Tyes28502848215602849-
PSYR205918:0:Tyes0264738671-
PSYR223283:2:Tyes4674605-
PTHE370438:0:Tyes1714301521
RAKA293614:0:Fyes-0----
RALB246199:0:Tyes-56-40
RBEL336407:0:Tyes-0----
RBEL391896:0:Fno-0----
RCAN293613:0:Fyes-0149---
RCAS383372:0:Tyes-10353--
RCON272944:0:Tno-0----
RDEN375451:4:Tyes021298-1-
RETL347834:5:Tyes632635012403699-
REUT264198:3:Tyes2852830171284-
REUT381666:2:Tyes20542056021762055-
RFEL315456:2:Tyes-0----
RFER338969:1:Tyes2052074820206-
RLEG216596:6:Tyes703706013584351-
RMAS416276:1:Tyes-0----
RMET266264:2:Tyes20682070021442069-
RPAL258594:0:Tyes43343464222150-
RPAL316055:0:Tyes885886440126140-
RPAL316056:0:Tyes646647412821650-
RPAL316057:0:Tyes40324031383123890-
RPAL316058:0:Tyes396339621352-0-
RPOM246200:1:Tyes021075-1-
RPRO272947:0:Tyes-0----
RRIC392021:0:Fno-0----
RRIC452659:0:Tyes-0----
RRUB269796:1:Tyes02555105-2556-
RSAL288705:0:Tyes---1185-0
RSOL267608:1:Tyes15511553185901552-
RSP101510:3:Fyes---6180-0
RSP357808:0:Tyes-216721660--
RSPH272943:4:Tyes236023620-2361-
RSPH349101:2:Tno141323210-2320-
RSPH349102:5:Tyes213921370-2138-
RTYP257363:0:Tno-0----
RXYL266117:0:Tyes----0128
SACI56780:0:Tyes16441642164101643-
SAGA205921:0:Tno-101080-1407
SAGA208435:0:Tno-101169-1575
SAGA211110:0:Tyes-101172-1490
SALA317655:1:Tyes33317210880171-
SARE391037:0:Tyes0----424
SAUR158878:1:Tno-23410
SAUR158879:1:Tno-23410
SAUR196620:0:Tno-23410
SAUR273036:0:Tno-23410
SAUR282458:0:Tno-23410
SAUR282459:0:Tno-23410
SAUR359786:1:Tno-23410
SAUR359787:1:Tno-23410
SAUR367830:3:Tno-23410
SAUR418127:0:Tyes-23410
SAUR426430:0:Tno--2310
SAUR93061:0:Fno-23410
SAUR93062:1:Tno-23410
SAVE227882:1:Fyes0980---4595
SBAL399599:3:Tyes021811197912499
SBAL402882:1:Tno021700186612402
SBOY300268:1:Tyes462095052683
SCO:2:Fyes5231----0
SDEG203122:0:Tyes19411780020141781-
SDEN318161:0:Tyes1802180045032318010
SDYS300267:1:Tyes2022671012929
SELO269084:0:Tyes339297--0-
SENT209261:0:Tno199119890199519902793
SENT220341:0:Tno462064052774
SENT295319:0:Tno186818660187218672762
SENT321314:2:Tno462087052888
SENT454169:2:Tno462171053023
SEPI176279:1:Tyes-23410
SEPI176280:0:Tno-23410
SERY405948:0:Tyes---0-3129
SFLE198214:0:Tyes462095052804
SFLE373384:0:Tno462051052727
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